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From 02/23/2015 to 03/24/2015

03/24/2015

10:29 PM Revision e5890d39 (cdmlib): add test for disassamble
Andreas Müller
10:24 PM Revision 72817f4b (cdmlib): remove failing sqlType test
Andreas Müller
10:17 PM Revision d6662fd7 (cdmlib): handle empty Shift #4734
Andreas Müller
06:13 PM Revision 51a98eee (taxeditor): correcting default values for bundle without jre
Cherian Mathew
06:05 PM Revision 82748537 (taxeditor): removed root files which should be present in the default file
Cherian Mathew
06:00 PM Revision 3007681b (taxeditor): missed in last commit
Cherian Mathew
05:59 PM Revision ea2426f6 (taxeditor): reverted all changes using maven to setup jre bundle . will do this in a bash script on jenkins instead.
Cherian Mathew
03:48 PM feature request #4716: Other dependencies to be updated
moving tickets to next milestone
Andreas Kohlbecker
03:48 PM bug #4707: LSID Authority service cannot find CoL LSIDs
moving tickets to next milestone
Andreas Kohlbecker
03:48 PM task #4600: Investigate and implement tests for security in cdm-vaadin
moving tickets to next milestone
Andreas Kohlbecker
03:48 PM feature request #4570: Add vocabulary for Specimen Description Features
moving tickets to next milestone
Andreas Kohlbecker
03:48 PM bug #4390: Titlecache of field unit does not update when changing field unit data via derived unit facade
moving tickets to next milestone
Andreas Kohlbecker
03:48 PM bug #4377: LazyInitializationException (LIE) related to Team.teamMembers when calling portal/taxon.json
moving tickets to next milestone
Andreas Kohlbecker
03:48 PM bug #4330: Correct handling of nomenclatural inreferences of Journals
moving tickets to next milestone
Andreas Kohlbecker
03:48 PM task #4232: Check all Comparators for fulfilling the Comparator contract
moving tickets to next milestone
Andreas Kohlbecker
03:48 PM feature request #3816: Create "Undefined" status and choose it for NULL status
moving tickets to next milestone
Andreas Kohlbecker
03:48 PM feature request #3580: Write permission error with temporary cdmserver echache dir
moving tickets to next milestone
Andreas Kohlbecker
03:48 PM feature request #3465: Function to copy secundum reference of a given taxon node to all it's children
moving tickets to next milestone
Andreas Kohlbecker
03:48 PM feature request #3362: Enabling sound files (mp3) in EDITor and data portal
moving tickets to next milestone
Andreas Kohlbecker
03:48 PM feature request #3133: security: preparation and first steps for Role, CdmAuthority and GrantedAuthorityImpl implement GrantedAuthority
moving tickets to next milestone
Andreas Kohlbecker
03:48 PM bug #3098: CdmPermissionEvaluator can test for multiple permissions
moving tickets to next milestone
Andreas Kohlbecker
03:48 PM bug #2939: ehcache diskStore conflict?
moving tickets to next milestone
Andreas Kohlbecker
03:48 PM task #2501: Remove redundant SDD import class
moving tickets to next milestone
Andreas Kohlbecker
03:46 PM Revision 5140a498 (taxeditor): delete is only called for already persisted objects
Katja Luther
03:45 PM bug #4583: zoological names with book as nomref shown with undesirable comma
moving tickets to next milestone
Andreas Kohlbecker
03:45 PM bug #4582: image gallery settings have no effect
moving tickets to next milestone
Andreas Kohlbecker
03:45 PM feature request #4383: multiple issues with de-duplication of references in bibliography
moving tickets to next milestone
Andreas Kohlbecker
03:45 PM bug #4223: Advanced search returns unexpected results
moving tickets to next milestone
Andreas Kohlbecker
03:45 PM feature request #3742: Display altitude, distance to Ground and watersurface correctly in dataportal
moving tickets to next milestone
Andreas Kohlbecker
03:45 PM feature request #3697: Distinguish display of fossil and "normal" occurrence records in specimen map
moving tickets to next milestone
Andreas Kohlbecker
03:45 PM bug #3564: Image metadata in lightbox not loaded in some cases
moving tickets to next milestone
Andreas Kohlbecker
03:45 PM bug #3370: ExternalLinks [ext-links]: External services: GBIF: add infraspecific taxa
moving tickets to next milestone
Andreas Kohlbecker
03:45 PM bug #3061: Lecototype typeReference not rendered correctly
moving tickets to next milestone
Andreas Kohlbecker
03:45 PM feature request #2985: Improve Specimen details display
moving tickets to next milestone
Andreas Kohlbecker
03:45 PM bug #2850: Error message on empty distribution
moving tickets to next milestone
Andreas Kohlbecker
03:45 PM task #2494: replace garland_cichorieae_cdm_taxon_list_thumbnails by settings
moving tickets to next milestone
Andreas Kohlbecker
03:26 PM Revision 99e79b80 (cdm-dataportal): ignoring .idea
Andreas Kohlbecker
03:26 PM Revision 2dced664 (cdm-dataportal): ignoring .idea
Andreas Kohlbecker
03:26 PM Revision 84a1fdcf (cdm-dataportal): upgrading to maven 3.0.5
Andreas Kohlbecker
03:26 PM Revision 0e879634 (cdm-dataportal): upgrading to maven 3.0.5
Andreas Kohlbecker
03:24 PM Revision 8abf0ce0 (taxeditor): merge-update from trunk
Patrick Plitzner
02:56 PM Revision 4b84b692 (taxeditor): fix #3758
Katja Luther
02:53 PM Revision cbfe514a (taxeditor): - fixed case of ö-umlaut
Patrick Plitzner
02:46 PM Revision 578f52ac (taxeditor): - initial implementation of WorkingSetView and WorkingSetEditor
Patrick Plitzner
02:35 PM Revision 1d1bfaef (taxeditor): branched trunk to workingSet branch
Patrick Plitzner
02:34 PM Revision f78c6297 (taxeditor): created new branch for working set perspective
Patrick Plitzner
02:29 PM Revision f15f6cdf (cdm-server): maven-site-plugin configuration
Andreas Kohlbecker
02:26 PM Revision d400a8b1 (taxeditor): merge-update from trunk
Patrick Plitzner
02:14 PM bug #4732 (New): TaxonName table won't trigger update on 'updated' column
if one changes a taxon name in the editor...the updated field in the database nor the editor reflect that change in t... Alexander Oppermann
02:13 PM Revision 52eafbd7 (taxeditor): added cleanup tasks after bundle jre
Cherian Mathew
02:00 PM Revision 0533d30f (cdm-server): Merge branch 'master' of edit-git:/var/git/cdm-server
Andreas Kohlbecker
02:00 PM Revision 84c4fcee (cdm-server): site delpoy path without trailing slash
Andreas Kohlbecker
01:19 PM Revision 1a1d3726 (cdm-server): [maven-release-plugin] prepare for next development iteration
edit-jenkins
01:19 PM Revision 624c228c (cdm-server): [maven-release-plugin] prepare release cdm-server-3.5.0
edit-jenkins
01:05 PM Revision 179f09a7 (cdm-server): upgrading to maven 3.0.5
Andreas Kohlbecker
12:41 PM Revision e3647a3c (cdm-server): updating maven plugins
Andreas Kohlbecker
12:35 PM Revision abcecbbb (cdmlib): switch-on validation in validation branch
Andreas Müller
12:20 PM Revision 0ccd95a4 (cdmlib): merge trunk into cdmlib-validation3
Andreas Müller
11:57 AM Revision 1be86351 (cdmlib): merge validation commits r23146, r23162, r23163 into trunk
Andreas Müller
11:35 AM Revision 28ae90a5 (cdmlib): merge r23161 into trunk
Andreas Müller
11:31 AM Revision 0b7493c7 (cdmlib): merge r23145 into trunk
Andreas Müller
11:18 AM Revision b69ad708 (taxeditor): - original label data uses multi line text field (#4565)
- initially not expanded Patrick Plitzner
11:08 AM Revision 2553a8f7 (taxeditor): - committed updated classpath
Patrick Plitzner
10:57 AM Revision 4d014d5d (taxeditor): - added i18n for german to plugin.xml
Patrick Plitzner
10:55 AM Revision 9cc6cbb9 (cdmlib-apps): upgrade version number in cdmapp
Andreas Müller
10:54 AM Revision af4ebb2e (taxeditor): moved jre dirs properties to pom file
Cherian Mathew
10:50 AM Revision 7edc41ed (taxeditor): - added i18n for german to plugin.xml
Patrick Plitzner
10:42 AM Revision 0a45363c (cdmlib): [maven-release-plugin] prepare for next development iteration
edit-jenkins
10:42 AM Revision f2e32cd9 (cdmlib): [maven-release-plugin] prepare release cdmlib-parent-3.5.0
edit-jenkins
10:25 AM Revision 8367bf37 (taxeditor): - added i18n for german to plugin.xml
Patrick Plitzner
10:18 AM Revision 5b209440 (cdmlib): decoupling version of cdm-vaadin, to solve problems in the maven release:prepare phase
Andreas Kohlbecker
10:18 AM Revision 162e0983 (cdmlib): ignoring .settings
Andreas Kohlbecker
09:42 AM Revision fc048a0f (cdmlib): Added one more unit test for saveEntityValidation()
Ayco Hollemann
09:25 AM Revision dfd73563 (cdmlib): Added more unit tests for saveEntityValidation
Ayco Hollemann
09:25 AM Revision eab1d74d (cdmlib): Added more unit tests for saveEntityValidation
Ayco Hollemann
09:24 AM Revision f0010264 (taxeditor): - removed unused import
Patrick Plitzner
09:10 AM Revision ff50895b (taxeditor): - added conversation holder to AligmentEditor
- commit when saving Patrick Plitzner

03/23/2015

07:03 PM Revision ae0ff092 (taxeditor): OpenAlignmentEditorHandler marked as deprecated.
equals() and hashCode() added to AlignmentEditorInput.
Minor changes.
Ben Stöver
06:21 PM Revision 74d26d4c (taxeditor): added comments
Cherian Mathew
06:15 PM Revision 0c737257 (taxeditor): eu.etaxonomy.taxeditor/pom.xml, eu.etaxonomy.taxeditor.product.with.jre/wo.jre : configuration for product bundled with jre
eu.etaxonomy.taxeditor.feature/pom.xml, build.properties.with.jre/wo.jre : configuration for jre dir symlinks and roo... Cherian Mathew
06:06 PM Revision 38d72f27 (cdmlib): [maven-release-plugin] prepare for next development iteration
edit-jenkins
06:06 PM Revision 49753fdd (cdmlib): [maven-release-plugin] prepare release cdmlib-commons-3.5.0
edit-jenkins
04:55 PM Revision da0ac859 (cdmlib): add Transient to getNullSafe methods and make MarkerType not null Level2 rule
Andreas Müller
04:42 PM Revision 11444091 (cdm-dataportal): no longer using deprecated method
Andreas Kohlbecker
04:41 PM Revision 401bed13 (cdm-dataportal): updating selenium to latest
Andreas Kohlbecker
04:28 PM task #4338: [MASTER] Handle abbreviated title and protected cache correctly in TaxEditor
Move some Editor tickets to next release
Andreas Müller
04:25 PM Revision a2581e7c (cdmlib): Implemented do-not-replace-identical-errors functionality and unit tests for it
Ayco Hollemann
04:24 PM Revision 64f6ddcc (cdmlib): added equals() method to EntityConstraintViolation. Added setValidatedEntity method to EntityValidation
Ayco Hollemann
03:46 PM bug #4721: RestServices for list methods return error when index is out of range
AM: Gibt man bei den RestServers für die Listmethoden einen Startwert ein, der oberhalb des counts liegt, wird eine ... Andreas Müller
03:44 PM bug #4721 (Worksforme): RestServices for list methods return error when index is out of range
List methods in Restservices do return an http 500 Error which is caused by an internal IllegalArgumentException. Thi... Andreas Müller
03:33 PM Revision e2b48551 (cdmlib-apps): Improved bfn related xml importer
* added german federal states vocabulary Alexander Oppermann
03:30 PM Revision aa2493c9 (cdmlib): Improved parser for zoological names...
Alexander Oppermann
03:15 PM Revision 36b2bfe9 (cdm-server): more robust script
Andreas Kohlbecker
03:07 PM Revision bf17c2f9 (cdm-server): Merge branch 'master' of edit-git:/var/git/cdm-server
Andreas Kohlbecker
02:59 PM Revision d335e2f5 (cdm-server): turning explain of script on
Andreas Kohlbecker
02:52 PM Revision 9a5799d4 (taxeditor): merge-update from trunk
Patrick Plitzner
02:50 PM Revision 0b0184fd (taxeditor): - moved the "Add..." menu to the bottom because otherwise it corrupts the context-menu every second click
Patrick Plitzner
02:41 PM Revision 1ed6a472 (taxeditor): merge-update from trunk
Patrick Plitzner
01:24 PM Revision dfbf90a2 (cdmlib): minor
Andreas Müller
01:15 PM Revision bea051c9 (cdmlib): fix bug in update script
Andreas Müller
01:15 PM Revision e2c6bb15 (taxeditor): - reverted r22854
Patrick Plitzner
01:12 PM Revision 5f2bb8fe (taxeditor): - removed unnecessary message logging
Patrick Plitzner

03/22/2015

08:53 PM feature request #4610: [DISCUSS] I18n for the EDIT platform
Interesting might be
* http://stackoverflow.com/questions/5463714/how-to-format-message-with-argument-names-instead-...
Andreas Müller
08:01 PM Revision 25cebbb3 (cdmlib-apps): Add redlist animals to BgbmInstancesUpdater
Andreas Müller

03/21/2015

10:54 PM Revision 5398f65a (taxeditor): Minor changes.
Ben Stöver
10:31 PM Revision 3a7c34d0 (taxeditor): ShowPherogramHandler added and linked to pop-up menu in specimen tree.
OpenAlignmentEditor renamed according to convention. Ben Stöver
07:22 PM Revision 173ebf21 (taxeditor): Initial implementation of CDM data reading and writing in AlignmentEditor.
Minor changes. Ben Stöver

03/20/2015

10:33 PM Revision 4ede43fe (cdmlib-apps): changes version numbers in appimport
Andreas Müller
10:14 PM Revision e1b740f7 (cdmlib): minor
Andreas Müller
10:14 PM Revision fffdeea2 (cdmlib): unignore edit geoservice test
Andreas Müller
05:15 PM Revision f47ccdb9 (cdm-server): update cdmserver to 3.5.0
Andreas Müller
04:17 PM Revision 70ab1592 (cdmlib): add listener for taxon name in determination event and run update script again
Andreas Müller
03:35 PM feature request #4311: Improve person representation in CDM
added collectorTitle and protectedCollectorTitleCache r23113, r23114 and r23115
Andreas Müller
01:17 PM feature request #4311 (In Progress): Improve person representation in CDM
Andreas Müller
03:26 PM Revision 525e46f1 (cdm-vaadin): use spring version as parameter in vaadin pom
Andreas Müller
03:23 PM Revision 8183b758 (cdmlib): minor
Andreas Müller
03:19 PM Revision e1eea34e (cdmlib): update test H2 in remote webapp
Andreas Müller
03:01 PM Revision e192762e (cdmlib): fix test environment for Identifier being Annotatable #4673
Andreas Müller
03:00 PM Revision 0b8e7a1d (cdmlib): further fixes for collectorTitle #4311
Andreas Müller
02:41 PM Revision 7aa14043 (cdmlib): fixing persistence tests on AgentBase.collectorTitle #4311
Andreas Müller
02:26 PM Revision f35bb00a (cdmlib): add collectorTitle and protectedCollectorTitleCache to Team(orPersonBase) #4311
Andreas Müller
01:55 PM Revision e22e9d11 (cdmlib): update named area idInVocabularies if necessary #4140
Andreas Müller
01:32 PM Revision ce0733cc (cdmlib): make identifier annotatable #4673
Andreas Müller
01:21 PM feature request #3734 (In Progress): Stop separating term and schema update
Andreas Müller
01:12 PM Revision ef081a36 (cdmlib): make identifier annotatable #4673
Andreas Müller
11:34 AM Revision aca37b0a (cdmlib): minor
Andreas Müller
11:32 AM Revision 134305da (cdmlib): update script for orphaned taxon node removal #2341
Andreas Müller
02:53 AM Revision ddba84c0 (cdm-vaadin): use parameter for spring version
Andreas Müller
02:38 AM Revision 2afa3e78 (taxeditor): 3.4.1->3.5.0 in MANIFEST
Andreas Müller
02:28 AM Revision 2415984f (taxeditor): 3.4.1->3.5.0 in MANIFEST
Andreas Müller
02:03 AM Revision 342277f8 (cdm-vaadin): change vaadin-pom to 3.5.0
Andreas Müller
01:09 AM Revision db42120d (taxeditor): update Manifest from 3.4.1 -> 3.5.0
Andreas Müller
12:59 AM Revision 287c6027 (taxeditor): switch of ValidationDaemon
Andreas Müller
12:58 AM Revision 08576422 (taxeditor): update taxeditor version from 3.4.1 to 3.5.0
Andreas Müller
12:46 AM Revision 86372594 (cdmlib): update cdmlib poms from 3.4.1-SNAPSHOT to 3.5.0-SNAPSHOT
Andreas Müller
12:43 AM Revision 68df9072 (taxeditor): merge trunk into taxeditor-validation3 trunk
Andreas Müller

03/19/2015

11:08 PM Revision a266eaa3 (taxeditor): javadoc
Andreas Müller
10:56 PM Revision b119539f (taxeditor): minor renaming
Andreas Müller
10:37 PM Revision 0219b768 (taxeditor): merge taxeditor validation2 into trunk
Andreas Müller
10:36 PM Revision d8002f07 (taxeditor): merge taxeditor validation2 into trunk
Andreas Müller
10:36 PM Revision 21adfb98 (taxeditor)
Andreas Müller
10:35 PM Revision 3c5782d0 (taxeditor): merge taxeditor validation2 into trunk
Andreas Müller
10:34 PM Revision 17cdf390 (taxeditor)
Andreas Müller
05:36 PM Revision 9cad1266 (taxeditor): reverting back jre dir option since the packaged download does not run since the jre is not found
Cherian Mathew
04:46 PM Revision 69b65c9e (taxeditor): new branch for taxeditor validation-framework3
Andreas Müller
04:43 PM Revision 330e0476 (cdmlib): branch new cdmlib-validation3
Andreas Müller
04:38 PM Revision 8cc3a22a (taxeditor): updating tycho version to 0.22.0
Cherian Mathew
04:36 PM Revision a8e762da (taxeditor): wrong target revision in the last commit
Cherian Mathew
04:30 PM Revision 6d658ad8 (cdmlib): adapt CommonService to allow collection save and add remotewebapp test H2 udpate
Andreas Müller
04:25 PM Revision b19a1b74 (taxeditor): reverting back wrongly committed files
Cherian Mathew
04:25 PM Revision 189cbf73 (cdmlib-apps): adapt eflora and pesi to 3.5 and validation2
Andreas Müller
04:16 PM Revision 68fe5da5 (taxeditor): Updated version in config files to 3.4.1-SNAPSHOT
Cherian Mathew
04:11 PM Revision 91759c63 (taxeditor): Updated version in config files to 3.4.0
Cherian Mathew
03:52 PM Revision 3a125157 (taxeditor): merge ValidationEditor2 branch to trunk
Andreas Müller
03:40 PM Revision 43c1664b (taxeditor): add api.validation.batch to exported packages
Andreas Müller
03:38 PM Revision 79805838 (taxeditor): add priority to 10 in CdmStore connect to datasource
Andreas Müller
03:33 PM Revision 6f18359a (cdmlib): updated cdmTest in remote webapp to new model
Andreas Müller
02:56 PM Revision 7549a329 (cdmlib): merge validation2 and model 3.5 into trunk
Andreas Müller
02:56 PM Revision ffec9b10 (cdmlib): merge validation2 and model 3.5 into trunk
Andreas Müller
02:53 PM Revision 74400e6b (cdmlib): merge validation2 and model 3.5 into trunk
Andreas Müller
02:49 PM Revision 05cdf24e (cdmlib): merge validation2 and model 3.5 into trunk
Andreas Müller
02:45 PM Revision afa979f2 (cdmlib): merge validation2 and model 3.5 into trunk
Andreas Müller
02:29 PM Revision 782d9cc1 (cdmlib): merge validation2 and model 3.5 into trunk
Andreas Müller
02:28 PM Revision e902c13e (cdmlib): merge validation2 and model 3.5 into trunk
Andreas Müller
02:24 PM Revision 1494441e (cdmlib): merge validation2 and model 3.5 into trunk
Andreas Müller
02:21 PM Revision 9b4c921e (taxeditor)
Katja Luther
09:41 AM Revision df45c2e7 (taxeditor): - commented root folders because they are still empty
Patrick Plitzner

03/18/2015

11:50 PM Revision 0c7a2b62 (taxeditor): - added empty root folders for the JREs
- adapted ini file and build.properties
- #4717
Patrick Plitzner
06:35 PM Revision 07cebe78 (taxeditor): moved cached cdm entity field update for only CdmBase objects
Cherian Mathew
06:18 PM Revision 1cf4b291 (cdmlib): fix jaxb annotation for intextreferences
Andreas Müller
06:16 PM Revision 422dd358 (cdmlib): fix intextReference jaxb annotation
Andreas Müller
06:13 PM Revision 87120f4f (cdmlib): minor
Andreas Müller
06:12 PM Revision 3e008cd9 (cdmlib): remove validation manager from default spring configuration to be able to merge into trunk.
Andreas Müller
05:14 PM feature request #4706 (Closed): Create IntextReference
closing ticket as the tables / classes exist now and update script seems to work. However, we still need to implement... Andreas Müller
05:12 PM feature request #4719 (New): [MASTER] Implement IntextReference
IntextReference is available now (#4706). However, we still need to add listeners, deduplicaters etc to be able to us... Andreas Müller
05:01 PM Revision f3744485 (cdmlib): minor
Andreas Müller
04:58 PM Revision b4050021 (cdmlib): merge model into validation (add default constructor for IntextReference)
Andreas Müller
04:56 PM Revision 5c1e2fd7 (cdmlib): add default constructor for IntextReference
Andreas Müller
04:42 PM Revision a7d821f2 (cdmlib): merge updated update script into validation framework
Andreas Müller
04:40 PM Revision b0aeb9de (cdmlib): adapt update script for versionable entities
Andreas Müller
04:17 PM Revision 8786b9fb (cdmlib): merge updated test sqls into validation branch
Andreas Müller
04:15 PM Revision 452e0007 (cdmlib): fix test sql in model branch
Andreas Müller
04:09 PM Revision ba2853d0 (cdmlib): merge fix from model branch to validation branch
Andreas Müller
04:08 PM Revision ad547dbf (cdmlib): merge trunk and model changes into validation framework2 branch
Andreas Müller
04:07 PM Revision bc0c54a6 (cdmlib): merge trunk and model changes into validation framework2 branch
Andreas Müller
04:06 PM Revision dbce7b0a (cdmlib): add IntextReference to test sql and make IntextReference a versionable entity
Andreas Müller
04:02 PM Revision 32103a77 (taxeditor): Added Create Hierarchy Service for Editor as a experimental feature
Alexander Oppermann
03:37 PM Revision 7d44a3d7 (taxeditor): Removed Reference Tab from checklist editor....
Alexander Oppermann
03:31 PM Revision 39440f4e (taxeditor): - parse URIs from attached pherogram files to open AlignmentEditor
Patrick Plitzner
03:06 PM Revision e6443394 (cdmlib): merging trunk into cdm3.5 branch
Andreas Müller
02:51 PM Revision 405fc70f (taxeditor): - added context menu option to DerivateEditor to open sequence in AlignmentEditor
Patrick Plitzner
02:51 PM Revision 29cff3be (cdmlib): minor
Andreas Müller
02:50 PM Revision 46521256 (cdmlib): fix 2 bugs in update script for validation framework
Andreas Müller
09:35 AM Revision ccd80f9f (cdmlib): - added option to cancel import
Patrick Plitzner

03/17/2015

06:07 PM Revision 75efb034 (cdmlib): - avoid duplicate taxon nodes in default classification
Patrick Plitzner
06:06 PM Revision ff84c9fb (cdmlib): - added test file
Patrick Plitzner
03:55 PM Revision e700c0bb (cdmlib): remove import
Andreas Müller
02:26 PM Revision 888abfcf (cdmlib): - refactored code
Patrick Plitzner
02:22 PM feature request #4716 (Closed): Other dependencies to be updated
We currently do update spring dependencies to version 3.2.13 (#4702) as this is required for java 8. As we update dep... Andreas Müller
02:19 PM Revision ae058fd5 (cdmlib): - enhanced progress monitor
Patrick Plitzner
02:07 PM Revision e2e537ff (cdmlib): - enhanced progress monitor
- fixed multiple default classification creation Patrick Plitzner
01:36 PM Revision 4fb0c1bd (cdmlib): - fixed potential NPE
Patrick Plitzner
12:46 PM Revision 22926545 (cdmlib): - fixed taxon node matching for default classification
Patrick Plitzner
11:35 AM Revision 418a2bdc (cdmlib): fix search for common names in editor and minor
Katja Luther
11:04 AM Revision 7ec3473d (cdmlib): - added new test cases (still temporarily @Ignore)
Patrick Plitzner
11:03 AM Revision 5e0e1b40 (cdmlib): - fixed potential NPE
Patrick Plitzner

03/16/2015

09:10 PM Revision 71662a8c (cdmlib): - fixed potential NPE when adding taxon nodes for infra species
Patrick Plitzner
09:08 PM Revision 1d429a67 (taxeditor): - fixed background of checkbox
Patrick Plitzner
05:32 PM bug #4573: Handle duplicate username, group or grantedAuthority correctly
Moving tickets that were auto assigned to me to the unassigned milestone
Cherian Mathew
05:32 PM feature request #4538: Enable creation of taxon without classification
Moving tickets that were auto assigned to me to the unassigned milestone
Cherian Mathew
05:32 PM feature request #4452: p2 update problem with nebula compositetable dependency
Moving tickets that were auto assigned to me to the unassigned milestone
Cherian Mathew
05:32 PM feature request #4246: Allow inserting a new node at the beginning or somewhere else in the Polytomous Key tree
Moving tickets that were auto assigned to me to the unassigned milestone
Cherian Mathew
05:32 PM feature request #3746: Implement time period scope for description elements in TaxEditor
Moving tickets that were auto assigned to me to the unassigned milestone
Cherian Mathew
05:32 PM task #3603: Remove creation of dummy DefinedTerm when creating new Term related entities
Moving tickets that were auto assigned to me to the unassigned milestone
Cherian Mathew
05:32 PM bug #3536: Incorrect last version documentation for Editor
Moving tickets that were auto assigned to me to the unassigned milestone
Cherian Mathew
05:32 PM feature request #3337: Correct multiple occurrences of basionym within a homotypic group
Moving tickets that were auto assigned to me to the unassigned milestone
Cherian Mathew
05:32 PM bug #2957: running maven site:site for Taxonomic Editor fails
Moving tickets that were auto assigned to me to the unassigned milestone
Cherian Mathew
04:49 PM Revision a8931728 (cdmlib): - some code speed up
- better default classification handling Patrick Plitzner
03:26 PM Revision 96a6c6d2 (cdmlib): - fixed adding to default classification
Patrick Plitzner
03:14 PM Revision 4d8fb1a4 (cdmlib-apps): Adapted Redlist Import to new XML Schema...
Alexander Oppermann
03:03 PM Revision bfcf9a73 (cdmlib): - temporarily added test to ignore
Patrick Plitzner
02:50 PM Revision cab1ae9e (cdmlib): - implemented new config option "Move new taxa to default classification"
Patrick Plitzner
02:26 PM Revision 9cb12847 (taxeditor): merge-update from trunk
Patrick Plitzner
02:25 PM Revision a843f7d6 (taxeditor): merge-update from trunk
Patrick Plitzner
02:18 PM Revision 8d425e15 (cdmlib): - added new config option "Move new taxa to default classification"
- do not add associations for identifications with preferredFlag=false Patrick Plitzner
01:51 PM Revision 5a4c13de (taxeditor): for drag & drop it is now possible to move a taxonnode as a child node of the classification
Katja Luther
12:59 PM Revision 3884b4f5 (taxeditor): Adjustments to recent changes in LibrAlign.
Ben Stöver
10:10 AM Revision 18f98b68 (cdmlib): - enhanced report
Patrick Plitzner
09:58 AM Revision 89b754ae (cdmlib): - enhanced ggbn parsing
- enhanced report Patrick Plitzner

03/13/2015

07:24 PM Revision fc2b8c3b (cdmlib): allow count in common service
Andreas Müller
07:23 PM Revision 534fe96f (cdmlib): updating some validation rules
Andreas Müller
07:13 PM Revision eb822d17 (cdmlib): change name for lastChanged in EntityValidation
Andreas Müller
03:45 PM Revision eb206c83 (utis-core): using cdm LSIDAuthority service to resolve LSIDs
Andreas Kohlbecker
03:11 PM bug #4707: LSID Authority service cannot find CoL LSIDs
The problem is the missing data on the LSIDAuthority and on the namespaces.
The following SQL statements are fixing ...
Andreas Kohlbecker
01:30 PM Revision d6358e66 (cdmlib): minor
Andreas Müller
01:07 PM Revision 6cadc7aa (cdmlib): add validation framework model updates to update script #4709
Andreas Müller
12:57 PM Revision 6f0ee8c8 (utis-core): fixing checklist in clientStatus
Andreas Kohlbecker

03/12/2015

08:57 PM Revision 773c07cc (cdmlib): - added test to ignore temporarily
Patrick Plitzner
07:53 PM Revision 3dd71114 (cdmlib): - added test to ignore temporarily
Patrick Plitzner
07:20 PM Revision 93186c1a (cdmlib): - fixed rank parsing
- added deprecate annotation to config option Patrick Plitzner
05:03 PM Revision ab7a4a3e (cdmlib): switching label and text in IdentifierType
Andreas Müller
04:55 PM Revision a2e26d97 (cdmlib): last updates to eFlora import
Andreas Müller
04:55 PM Revision cc183eba (cdmlib-apps): last updates to eFlora import
Andreas Müller
04:53 PM Revision effbb5f7 (cdmlib): add LSID and Alternative field number to Identifier Type vocabulary #4708, #4674
Andreas Müller
04:23 PM Revision 026504b2 (utis-webapp): implementing findByIdentifier search mode
Andreas Kohlbecker
04:21 PM Revision 4bf82c34 (utis-core): implementing findByIdentifier search mode
Andreas Kohlbecker
04:14 PM Revision c6974750 (cdm-vaadin): StatusComposite : added ui elements for filtering add / removing taxa
styles.css : added custom styles for filter table , grid spacing
StatusEditorUI : changed theme to mytheme
Cherian Mathew
04:12 PM bug #4707 (In Progress): LSID Authority service cannot find CoL LSIDs
The following request fails
https://test.e-taxonomy.eu/cdmserver/col/authority/data.do?lsid=urn%3Alsid%3Acatalog...
Andreas Kohlbecker
04:07 PM Revision f5e6b489 (cdmlib): - temp changes for name matching
Patrick Plitzner
03:52 PM feature request #4706: Create IntextReference
first implementation r22998
Andreas Müller
01:19 PM feature request #4706 (In Progress): Create IntextReference
Andreas Müller
01:12 PM feature request #4706 (Closed): Create IntextReference
We need the possibility to link to other CDM / external objects from within a text (e.g. a description or an annotati... Andreas Müller
03:51 PM Revision 089d5075 (cdmlib): Added first version for IntextReference #4706
Andreas Müller
03:46 PM Revision d4e1589e (taxeditor): - enabled supplemental view for ConceptView (#4681)
Patrick Plitzner
01:20 PM Revision f0f54b27 (cdm-vaadin): unitils.properties : reverted back to normal h2 settings
StatusPresenterTest : using mock status composite Cherian Mathew
12:50 PM Revision 4dd52e03 (taxeditor)
Katja Luther
12:47 PM Revision a9f295dd (taxeditor)
Katja Luther
12:21 PM Revision 07b487d5 (taxeditor)
Katja Luther
12:20 PM Revision 73d9ca6b (cdmlib): moveTaxon() with uuids instead of objects as arguments
Katja Luther
11:34 AM Revision 8b96aaff (cdm-vaadin): added latest unitils version and p6spy jar
Cherian Mathew
11:34 AM Revision 3908fcfb (cdm-vaadin): test classes and datasets for status editor
Cherian Mathew
11:33 AM Revision 51fe9924 (cdm-vaadin): First commit for Status Editor
StatusEditorUI, StatusEditorView, StatusComposite, IStatusComposite, StatusPresenter : MVP classes for status editor
...
Cherian Mathew
10:53 AM Revision a7995dba (utis-core): hamonizing checklist querying api
Andreas Kohlbecker
10:47 AM Revision 805fd9e7 (utis-core): adding searchmode 'findByIdentifier'
Andreas Kohlbecker

03/11/2015

05:59 PM Revision ac6425b0 (utis-webapp): reating trunk controller method for identifier resolution service
Andreas Kohlbecker
05:59 PM Revision 8537e547 (utis-webapp): updating documentation
Andreas Kohlbecker
04:23 PM Revision bb4d7f04 (utis-core): adding more lsid as identifier and switching to edit-test until the next cdm release
Andreas Kohlbecker
04:17 PM Revision f2137d95 (cdmlib): - some name matching enhancements
Patrick Plitzner
01:42 PM Revision 7af981f8 (cdmlib): - reverted comment of test
Patrick Plitzner
10:50 AM Revision ef183cff (cdmlib): - added info messages to report
- enhanced taxon name matching Patrick Plitzner

03/10/2015

05:49 PM Revision c9c99206 (cdmlib): latest updates to FotG import
Andreas Müller
05:49 PM Revision 629f1416 (cdmlib-apps): latest updates to FotG import
Andreas Müller
03:00 PM Revision 5d1cbf76 (cdm-server): adding weak dependency on mysql and on prostgresql to init script of cdmserver
Andreas Kohlbecker
02:42 PM Revision 8095243e (cdmlib): type removed from SpecimenTypeParser
Andreas Müller
02:39 PM Revision c2d9153d (cdmlib): update to Markup import
Andreas Müller
01:47 PM Revision 3513a90b (taxeditor): improve messaging
Katja Luther
12:23 PM Revision 03da12fc (cdm-server): using jasper instead of glassfish for jsp (better conforms to jetty-9.2 onwards)
Andreas Kohlbecker
12:22 PM Revision 1b9350d1 (cdm-server): using other fonts which match those in swagger-ui
Andreas Kohlbecker
12:13 PM Revision c5b5e05e (taxeditor): delete the message that the delete functionality is an experimental feature
Katja Luther
11:31 AM Revision f260e5fd (cdmlib): minor
Andreas Müller
11:29 AM Revision f66a6047 (taxeditor)
Katja Luther
11:20 AM Revision 616fad52 (taxeditor)
Katja Luther
11:17 AM Revision f9af40c0 (cdmlib)
Katja Luther
10:53 AM Revision 25c90163 (cdmlib)
Katja Luther
10:36 AM Revision d052fc56 (cdmlib)
Katja Luther
10:06 AM Revision f973242a (cdmlib): for infrageneric unranked rank adding [unranked] (Art.37.7 Melbourne Code)
fixing bug with deletion of names and homotypicalGroups Katja Luther
10:06 AM Revision bafb4761 (taxeditor): bug fixxing in bulk editor and referencing objects view
bug fixing in deletion of names and homotypical groups Katja Luther

03/09/2015

11:00 AM Revision ba0d4c2f (taxeditor): httpInvokerServiceClients.xml : set 'CdmServiceRequestExecutor' class as default for all services
ICdmEntitySession, CdmEntitySession, MockCdmEntitySession : added method to update session
ICdmEntitySessionManager, ...
Cherian Mathew

03/06/2015

04:41 PM Revision 88071106 (cdmlib): minor renaming
Andreas Müller
04:34 PM Revision 4c97cd9b (cdmlib): rename batch validation package
Andreas Müller

03/05/2015

04:02 PM feature request #4682 (New): [DISCUSS] Do we need an explanation/reason field in RelationBase
Some relations such as TaxonRelations are opinion. We may want to have a field to verbally explain why an author thin... Andreas Müller
02:05 PM Revision c96e9783 (cdmlib): - fixed name matching when ignoring authorship
Patrick Plitzner

03/04/2015

10:29 PM Revision 6171e2e7 (cdmlib): add term updater for 3.4.1 to 3.5.0 and change schema version number
Andreas Müller
10:20 PM Revision 2ca867b0 (cdmlib): add schema updater for 3.4.1 to 3.5.0
Andreas Müller
05:06 PM Revision 609a2f23 (cdmlib): - fixed getTaxonForName()
Patrick Plitzner
04:35 PM Revision 927fd98d (cdmlib): - added removeCountryFromLocalityText option to configurator (basically implementing the hack #4677)
Patrick Plitzner
02:51 PM Revision 27205004 (cdmlib): - shortened regex
Patrick Plitzner
02:34 PM Revision 341a29eb (cdmlib): - fixed temporary geolocation hack
Patrick Plitzner
02:00 PM Revision 771a2b9e (cdmlib): - fixed java doc
Patrick Plitzner
01:18 PM Revision 0232373f (cdmlib): removed unused imports
Cherian Mathew
01:17 PM Revision 2c8c883f (cdmlib): added exists method to interface and implementing classes
Cherian Mathew
01:17 PM Revision a01e75f6 (cdmlib): added cdmEntity object in UpdateResult and updated service class accordingly
Cherian Mathew
01:14 PM Revision aefcbf9a (cdmlib): added class to override Hibernate EntityType class to fix problem with merge replace
Cherian Mathew
12:30 PM Revision 2396aeef (cdmlib): - fixed name matching when ignoring author
Patrick Plitzner
11:36 AM Revision 9fc0c8e4 (cdmlib): - re-added temporary hack
Patrick Plitzner
10:45 AM Revision 603900f1 (cdmlib): - removed temporary hack
Patrick Plitzner
10:44 AM Revision 75af8420 (cdmlib): - fixed mapUnitIdToBarcode
- fixed NPE for name parsing Patrick Plitzner
08:46 AM Revision fbf34d08 (cdmlib): - added config option to choose mapping of ABCD UnitID
- added config option to ignore authorship when matching taxa
- added first draft of ggbn extension parsing
Patrick Plitzner

03/03/2015

03:37 PM Revision bfa92264 (cdmlib): closed connection after saving entity validation
Ayco Hollemann
03:31 PM Revision cdd75d2d (taxeditor): - added Identifier details section
Patrick Plitzner
03:18 PM Revision 68d62a47 (cdmlib): - added ignoreAuthorship flag to ABCD import
- when set to true taxon name matching will be done without the the authorship just on the nameCache of the NonViralName Patrick Plitzner
02:31 PM Revision 22fa3829 (cdmlib): - reset all relevant dataholder fields for every unit
Patrick Plitzner
02:28 PM Revision c33895ec (cdmlib): - added methods to handle identifiers
Patrick Plitzner
12:49 PM Revision e63c7038 (taxeditor): - added derivate hierarchy section
- refactored DerivateContentProvider Patrick Plitzner
12:46 PM Revision 174f5cbf (cdmlib): - fixed java doc
Patrick Plitzner
12:46 PM Revision 90b74be8 (taxeditor): - simplified identifier creation
Patrick Plitzner
09:37 AM Revision d26e0122 (cdmlib)
Ayco Hollemann

03/02/2015

02:47 PM Revision eeb09405 (cdmlib): latest changes for Markup import
Andreas Müller
02:24 PM Revision a4bf929e (cdm-server): added el-impl missing dependency
Cherian Mathew
02:13 PM Revision c3cb2034 (cdm-server): adding missing el-api dependency
Cherian Mathew
02:01 PM Revision dbc5d811 (cdm-server): added jar pattern to scan for initializer jar
Cherian Mathew
01:43 PM Revision 3bbdedf4 (cdm-server): reverting system property change since jetty 9 uses apache jasper as default
Cherian Mathew
01:38 PM Revision b0e78665 (cdmlib): latest changes for Markup import
Andreas Müller
01:37 PM Revision 015bcbc3 (cdmlib): add NewInstance for Names in Determination Event
Andreas Müller
01:36 PM Revision 35ecf5f0 (cdmlib-apps): remove compile error in pesi
Andreas Müller
01:29 PM Revision 7da83756 (taxeditor): - added checkbox for Descriptions to specimen delete dialog
Patrick Plitzner
01:10 PM Revision 5fcd1280 (taxeditor): - added checkbox for IndividualsAssociations to specimen delete dialog
Patrick Plitzner
01:05 PM Revision 5bb72419 (cdm-server): updated wagon versions and added ssh-external plugin
Cherian Mathew
11:58 AM Revision 0cc3815c (cdm-server): updated jsp configuration according to https://github.com/jetty-project/embedded-jetty-jsp
Cherian Mathew
10:56 AM Revision 2695d58c (cdm-server): patch for jetleak problem #4675
Cherian Mathew
10:21 AM Revision 348d552a (taxeditor): AbstractPersistentCollection : fixed loading of collection
MockCdmEntitySessionManager, MockCdmEntitySession, ICdmEntitySessionManager, ICdmEntitySession, CdmEntitySessionManag... Cherian Mathew
10:06 AM Revision bb534368 (taxeditor): merge from trunk
Cherian Mathew
09:38 AM Revision a695f7fa (taxeditor): made up-to-date with service layer changes
Cherian Mathew

02/27/2015

01:50 PM Revision c2b0873b (cdmlib): adadpt TimePeriodParser to include lifespan
Andreas Müller
01:49 PM Revision 15f936da (cdmlib-apps): cleanup BMAuthorImport
Andreas Müller
11:40 AM Revision ea9dc797 (cdmlib): minor
Andreas Müller
11:39 AM Revision 69e6c94b (cdmlib-apps): minor
Andreas Müller

02/26/2015

01:58 PM Revision dbc92cd0 (taxeditor): - fixed possible NPE
Patrick Plitzner
01:26 PM Revision 49f3a54a (taxeditor): - temporarily disabled cloning (#2645)
Patrick Plitzner
12:03 PM Revision 0e533708 (cdm-dataportal): - added null check
Patric Plitzner
11:58 AM Revision 4a703122 (taxeditor): - added context menu optio to create a media specimen with an existing media (fixes #2385)
Patrick Plitzner
11:56 AM Revision 9aa6bde8 (taxeditor): - used original label info from facade instead of from the derived unit (fixes #4565)
Patrick Plitzner
09:41 AM Revision cb36f789 (cdmlib): merge commit
Cherian Mathew
09:40 AM Revision 51a3a962 (cdmlib): CdmCacherTest : ignoring for now since we have reverted to using termmaps on server side
ITaxonService, TaxonServiceImpl, ITaxonNodeService, TaxonNodeServiceImpl, INameService, NameServiceImpl,IDescriptionS... Cherian Mathew
09:30 AM Revision 3ade78e3 (cdmlib): added code for updating entity validation status
Ayco Hollemann
09:26 AM Revision 2aa73e7b (cdmlib): updated getTermByUuid methods in the term classes to use the cacher
Cherian Mathew

02/25/2015

11:14 PM Revision a479285e (cdmlib-apps): minor updates to Moose and othe rimports
Andreas Müller
11:11 PM Revision ad00752d (cdmlib): add some doubtful taxon relationships tom BM transformer
Andreas Müller
10:32 PM Revision e2a06fda (cdmlib-apps): removing euromed databases from pesi
Andreas Müller
03:31 PM Revision 4f25a2e9 (taxeditor)
Ayco Hollemann
10:24 AM Revision 452fb2eb (cdmlib-apps): latest updates to MTMooseActivator
Andreas Müller
10:22 AM Revision 0af3e995 (cdmlib-apps): update datasource for moose and standardliste
Andreas Müller
10:21 AM Revision 445ffbfa (taxeditor): added custom executor for common service
Cherian Mathew
07:31 AM Revision b93817a3 (taxeditor): - refactored cdmViewer extension point to be more generic
Patrick Plitzner

02/24/2015

05:31 PM Revision 9cf48ad0 (cdmlib): add TypeDesignationValidation #4616
Andreas Müller
04:45 PM Revision be4fd0ef (taxeditor): commit after merge
Ayco Hollemann
04:45 PM Revision 9b846c32 (taxeditor): commit after merge
Ayco Hollemann
04:45 PM Revision 08e36b56 (taxeditor): fixed regression in marker manager & commit after merge
Ayco Hollemann
04:44 PM Revision 00db05b1 (taxeditor): commit after merge
Ayco Hollemann
04:44 PM Revision 04ded71c (taxeditor): commit after merge
Ayco Hollemann
03:37 PM Revision 0aac45f3 (cdmlib): commit after merge
Ayco Hollemann
02:50 PM Revision d1f0cad1 (cdmlib): added test for authipCache validation
Andreas Müller
02:50 PM Revision f27a8861 (cdmlib): added test for authipCache validation
Andreas Müller
01:21 PM Revision 288877fa (taxeditor): - added missing class filter to cdmViewer popup dialog
Patrick Plitzner
01:01 PM Revision 6a159a76 (taxeditor): - enhanced cdmViewer popup dialog
- added java doc Patrick Plitzner
11:22 AM Revision 81c60606 (taxeditor): - fix for java 1.6 compatibility
Patrick Plitzner
11:04 AM Revision 3dba9fc4 (taxeditor): - implemented framework which links an input element to viewers/editors which are able to display information about the element
- added ICdmViewer interface
- added extension point to register ICdmViewer
- registered EditorCdmViewer for the ...
Patrick Plitzner
10:41 AM Revision 1f94bdc9 (taxeditor): - added context menu option to open multiple specimen IndividualsAssociations from the factual data view
Patrick Plitzner

02/23/2015

06:21 PM Revision 45e12d2b (taxeditor): - added Open in Taxon Editor command to Taxon Bulk Editor (#4536)
Patrick Plitzner
06:01 PM Revision dfa995ff (cdmlib): remove unnecessary files from svn
Andreas Müller
05:57 PM Revision 3c9f95e7 (cdmlib): revert r22866 as SchemaUpdaters must not be changed once released
Andreas Müller
04:18 PM Revision 85260729 (taxeditor): - fixed #4629 (Remove "+" symbol after section title after the last collection item is removed)
Patrick Plitzner
03:59 PM feature request #4611: I18n for the TaxEditor menu
After a little investigation it seems that the current structure is a not well organized. I currently stopped working... Patrick Plitzner
02:54 PM feature request #4611 (Resolved): I18n for the TaxEditor menu
Patrick Plitzner
03:16 PM Revision 71c003e1 (cdmlib): commit before merge
Ayco Hollemann
03:10 PM Revision 7264adfc (cdmlib): EntityValidationResult -> EntityValidation
Ayco Hollemann
02:56 PM Revision 7c8422d0 (taxeditor): EntitValidationResult -> EntityValidation
Ayco Hollemann
02:04 PM Revision 98b5d616 (taxeditor): - changed button text
Patrick Plitzner
01:38 PM Revision 67c1f4fc (cdmlib-apps): minor
Andreas Müller
10:48 AM Revision 1cefc3d9 (taxeditor): - fixed MediaViewPart selection listening (#4575)
Patrick Plitzner
10:43 AM Revision 3586a882 (taxeditor): - refactored delete configrator dialog
- added dialog to derivate deletion Patrick Plitzner
10:42 AM Revision 36c996e0 (taxeditor): - removed default configurator setting
Patrick Plitzner
10:24 AM Revision 50cbc3ed (cdmlib)
Katja Luther
10:11 AM Revision b53a83bc (cdmlib): merge from trunk
Cherian Mathew
10:08 AM Revision dc58d8a8 (cdmlib): MockCdmCacher : not required
TaxonServiceSearchTest : removed reference to mock cacher Cherian Mathew
10:07 AM Revision 933e5ac3 (cdmlib): ICdmCacher, ICdmUuidCacher, CdmCacher, CdmTermCacher : refactored and added load method
Language, NameRelationshipType, Rank : now uses cacher only if termap is null or empty and only when class matches th... Cherian Mathew
09:51 AM Revision 1075da9a (taxeditor): ICachedCommonService, CachedCommonServiceImpl : moved class to service package
CdmApplicationRemoteConfiguration, AbstractPersistentCollection, AbstractLazyInitializer : refactored package of Cach... Cherian Mathew
09:50 AM Revision 18a11b70 (taxeditor): #4657
Katja Luther
09:40 AM Revision 14fb4b3b (taxeditor): #4658
Katja Luther
 

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