Activity
From 02/07/2015 to 03/08/2015
03/06/2015
- 04:41 PM Revision 88071106 (cdmlib): minor renaming
- 04:34 PM Revision 4c97cd9b (cdmlib): rename batch validation package
03/05/2015
- 04:02 PM feature request #4682 (New): [DISCUSS] Do we need an explanation/reason field in RelationBase
- Some relations such as TaxonRelations are opinion. We may want to have a field to verbally explain why an author thin...
- 02:05 PM Revision c96e9783 (cdmlib): - fixed name matching when ignoring authorship
03/04/2015
- 10:29 PM Revision 6171e2e7 (cdmlib): add term updater for 3.4.1 to 3.5.0 and change schema version number
- 10:20 PM Revision 2ca867b0 (cdmlib): add schema updater for 3.4.1 to 3.5.0
- 05:06 PM Revision 609a2f23 (cdmlib): - fixed getTaxonForName()
- 04:35 PM Revision 927fd98d (cdmlib): - added removeCountryFromLocalityText option to configurator (basically implementing the hack #4677)
- 02:51 PM Revision 27205004 (cdmlib): - shortened regex
- 02:34 PM Revision 341a29eb (cdmlib): - fixed temporary geolocation hack
- 02:00 PM Revision 771a2b9e (cdmlib): - fixed java doc
- 01:18 PM Revision 0232373f (cdmlib): removed unused imports
- 01:17 PM Revision 2c8c883f (cdmlib): added exists method to interface and implementing classes
- 01:17 PM Revision a01e75f6 (cdmlib): added cdmEntity object in UpdateResult and updated service class accordingly
- 01:14 PM Revision aefcbf9a (cdmlib): added class to override Hibernate EntityType class to fix problem with merge replace
- 12:30 PM Revision 2396aeef (cdmlib): - fixed name matching when ignoring author
- 11:36 AM Revision 9fc0c8e4 (cdmlib): - re-added temporary hack
- 10:45 AM Revision 603900f1 (cdmlib): - removed temporary hack
- 10:44 AM Revision 75af8420 (cdmlib): - fixed mapUnitIdToBarcode
- - fixed NPE for name parsing
- 08:46 AM Revision fbf34d08 (cdmlib): - added config option to choose mapping of ABCD UnitID
- - added config option to ignore authorship when matching taxa
- added first draft of ggbn extension parsing
03/03/2015
- 03:37 PM Revision bfa92264 (cdmlib): closed connection after saving entity validation
- 03:31 PM Revision cdd75d2d (taxeditor): - added Identifier details section
- 03:18 PM Revision 68d62a47 (cdmlib): - added ignoreAuthorship flag to ABCD import
- - when set to true taxon name matching will be done without the the authorship just on the nameCache of the NonViralName
- 02:31 PM Revision 22fa3829 (cdmlib): - reset all relevant dataholder fields for every unit
- 02:28 PM Revision c33895ec (cdmlib): - added methods to handle identifiers
- 12:49 PM Revision e63c7038 (taxeditor): - added derivate hierarchy section
- - refactored DerivateContentProvider
- 12:46 PM Revision 174f5cbf (cdmlib): - fixed java doc
- 12:46 PM Revision 90b74be8 (taxeditor): - simplified identifier creation
- 09:37 AM Revision d26e0122 (cdmlib)
03/02/2015
- 02:47 PM Revision eeb09405 (cdmlib): latest changes for Markup import
- 02:24 PM Revision a4bf929e (cdm-server): added el-impl missing dependency
- 02:13 PM Revision c3cb2034 (cdm-server): adding missing el-api dependency
- 02:01 PM Revision dbc5d811 (cdm-server): added jar pattern to scan for initializer jar
- 01:43 PM Revision 3bbdedf4 (cdm-server): reverting system property change since jetty 9 uses apache jasper as default
- 01:38 PM Revision b0e78665 (cdmlib): latest changes for Markup import
- 01:37 PM Revision 015bcbc3 (cdmlib): add NewInstance for Names in Determination Event
- 01:36 PM Revision 35ecf5f0 (cdmlib-apps): remove compile error in pesi
- 01:29 PM Revision 7da83756 (taxeditor): - added checkbox for Descriptions to specimen delete dialog
- 01:10 PM Revision 5fcd1280 (taxeditor): - added checkbox for IndividualsAssociations to specimen delete dialog
- 01:05 PM Revision 5bb72419 (cdm-server): updated wagon versions and added ssh-external plugin
- 11:58 AM Revision 0cc3815c (cdm-server): updated jsp configuration according to https://github.com/jetty-project/embedded-jetty-jsp
- 10:56 AM Revision 2695d58c (cdm-server): patch for jetleak problem #4675
- 10:21 AM Revision 348d552a (taxeditor): AbstractPersistentCollection : fixed loading of collection
- MockCdmEntitySessionManager, MockCdmEntitySession, ICdmEntitySessionManager, ICdmEntitySession, CdmEntitySessionManag...
- 10:06 AM Revision bb534368 (taxeditor): merge from trunk
- 09:38 AM Revision a695f7fa (taxeditor): made up-to-date with service layer changes
02/27/2015
- 01:50 PM Revision c2b0873b (cdmlib): adadpt TimePeriodParser to include lifespan
- 01:49 PM Revision 15f936da (cdmlib-apps): cleanup BMAuthorImport
- 11:40 AM Revision ea9dc797 (cdmlib): minor
- 11:39 AM Revision 69e6c94b (cdmlib-apps): minor
02/26/2015
- 01:58 PM Revision dbc92cd0 (taxeditor): - fixed possible NPE
- 01:26 PM Revision 49f3a54a (taxeditor): - temporarily disabled cloning (#2645)
- 12:03 PM Revision 0e533708 (cdm-dataportal): - added null check
- 11:58 AM Revision 4a703122 (taxeditor): - added context menu optio to create a media specimen with an existing media (fixes #2385)
- 11:56 AM Revision 9aa6bde8 (taxeditor): - used original label info from facade instead of from the derived unit (fixes #4565)
- 09:41 AM Revision cb36f789 (cdmlib): merge commit
- 09:40 AM Revision 51a3a962 (cdmlib): CdmCacherTest : ignoring for now since we have reverted to using termmaps on server side
- ITaxonService, TaxonServiceImpl, ITaxonNodeService, TaxonNodeServiceImpl, INameService, NameServiceImpl,IDescriptionS...
- 09:30 AM Revision 3ade78e3 (cdmlib): added code for updating entity validation status
- 09:26 AM Revision 2aa73e7b (cdmlib): updated getTermByUuid methods in the term classes to use the cacher
02/25/2015
- 11:14 PM Revision a479285e (cdmlib-apps): minor updates to Moose and othe rimports
- 11:11 PM Revision ad00752d (cdmlib): add some doubtful taxon relationships tom BM transformer
- 10:32 PM Revision e2a06fda (cdmlib-apps): removing euromed databases from pesi
- 03:31 PM Revision 4f25a2e9 (taxeditor)
- 10:24 AM Revision 452fb2eb (cdmlib-apps): latest updates to MTMooseActivator
- 10:22 AM Revision 0af3e995 (cdmlib-apps): update datasource for moose and standardliste
- 10:21 AM Revision 445ffbfa (taxeditor): added custom executor for common service
- 07:31 AM Revision b93817a3 (taxeditor): - refactored cdmViewer extension point to be more generic
02/24/2015
- 05:31 PM Revision 9cf48ad0 (cdmlib): add TypeDesignationValidation #4616
- 04:45 PM Revision be4fd0ef (taxeditor): commit after merge
- 04:45 PM Revision 9b846c32 (taxeditor): commit after merge
- 04:45 PM Revision 08e36b56 (taxeditor): fixed regression in marker manager & commit after merge
- 04:44 PM Revision 00db05b1 (taxeditor): commit after merge
- 04:44 PM Revision 04ded71c (taxeditor): commit after merge
- 03:37 PM Revision 0aac45f3 (cdmlib): commit after merge
- 02:50 PM Revision d1f0cad1 (cdmlib): added test for authipCache validation
- 02:50 PM Revision f27a8861 (cdmlib): added test for authipCache validation
- 01:21 PM Revision 288877fa (taxeditor): - added missing class filter to cdmViewer popup dialog
- 01:01 PM Revision 6a159a76 (taxeditor): - enhanced cdmViewer popup dialog
- - added java doc
- 11:22 AM Revision 81c60606 (taxeditor): - fix for java 1.6 compatibility
- 11:04 AM Revision 3dba9fc4 (taxeditor): - implemented framework which links an input element to viewers/editors which are able to display information about the element
- - added ICdmViewer interface
- added extension point to register ICdmViewer
- registered EditorCdmViewer for the ... - 10:41 AM Revision 1f94bdc9 (taxeditor): - added context menu option to open multiple specimen IndividualsAssociations from the factual data view
02/23/2015
- 06:21 PM Revision 45e12d2b (taxeditor): - added Open in Taxon Editor command to Taxon Bulk Editor (#4536)
- 06:01 PM Revision dfa995ff (cdmlib): remove unnecessary files from svn
- 05:57 PM Revision 3c9f95e7 (cdmlib): revert r22866 as SchemaUpdaters must not be changed once released
- 04:18 PM Revision 85260729 (taxeditor): - fixed #4629 (Remove "+" symbol after section title after the last collection item is removed)
- 03:59 PM feature request #4611: I18n for the TaxEditor menu
- After a little investigation it seems that the current structure is a not well organized. I currently stopped working...
- 02:54 PM feature request #4611 (Resolved): I18n for the TaxEditor menu
- 03:16 PM Revision 71c003e1 (cdmlib): commit before merge
- 03:10 PM Revision 7264adfc (cdmlib): EntityValidationResult -> EntityValidation
- 02:56 PM Revision 7c8422d0 (taxeditor): EntitValidationResult -> EntityValidation
- 02:04 PM Revision 98b5d616 (taxeditor): - changed button text
- 01:38 PM Revision 67c1f4fc (cdmlib-apps): minor
- 10:48 AM Revision 1cefc3d9 (taxeditor): - fixed MediaViewPart selection listening (#4575)
- 10:43 AM Revision 3586a882 (taxeditor): - refactored delete configrator dialog
- - added dialog to derivate deletion
- 10:42 AM Revision 36c996e0 (taxeditor): - removed default configurator setting
- 10:24 AM Revision 50cbc3ed (cdmlib)
- 10:11 AM Revision b53a83bc (cdmlib): merge from trunk
- 10:08 AM Revision dc58d8a8 (cdmlib): MockCdmCacher : not required
- TaxonServiceSearchTest : removed reference to mock cacher
- 10:07 AM Revision 933e5ac3 (cdmlib): ICdmCacher, ICdmUuidCacher, CdmCacher, CdmTermCacher : refactored and added load method
- Language, NameRelationshipType, Rank : now uses cacher only if termap is null or empty and only when class matches th...
- 09:51 AM Revision 1075da9a (taxeditor): ICachedCommonService, CachedCommonServiceImpl : moved class to service package
- CdmApplicationRemoteConfiguration, AbstractPersistentCollection, AbstractLazyInitializer : refactored package of Cach...
- 09:50 AM Revision 18a11b70 (taxeditor): #4657
- 09:40 AM Revision 14fb4b3b (taxeditor): #4658
02/19/2015
- 05:42 PM Revision 56a14252 (taxeditor): OpenInspectSessionsHandler : handler for opening the inspect session dialog
- CacheLoader : moved recursive logic from cdm transient cacher to new class
CdmServiceCacher : now uses CacheLoader to... - 03:45 PM Revision 37dc1508 (cdmlib): minor code layout issues
- 03:41 PM Revision 2b20926e (cdmlib): first working prototype for batch validation, with a couple of bugfixes in other validation functionalities
- 11:35 AM Revision 3e7c88cb (cdmlib): change cascade for constraintViolation.entityValidation
- 02:16 AM Revision e4cd54d4 (taxeditor): Adapt Editor to new CommonService and new validatedEntity naming
- 12:30 AM Revision ad796dc1 (cdmlib): nake common service a real common service (remove generics for OriginalSourceBase)
02/18/2015
- 11:55 PM Revision 593142c6 (cdmlib): clean up
- 11:29 PM Revision 38419948 (cdmlib): add not null constraint on point coordinates
- 11:00 PM Revision 5245e07f (cdmlib): better use of validation test base class
- 10:47 PM Revision fadc154f (cdmlib): fix BasionymMustShareEpithetsAndAuthorsValidator
- 06:26 PM Revision 3539fb8f (cdmlib): add valid taxonomic year validation #4125
- 05:40 PM Revision 4ca7dd41 (cdmlib): empty handling for CorrectEpithets and base class created for validation tests
- 05:26 PM Revision 7cda5903 (cdmlib): add noRecursiveInReference validation
- 05:15 PM Revision a0e48089 (cdmlib): add noRecursiveInReference validation
- 03:40 PM Revision e6446073 (cdmlib): created cdm 3.5 branch
- 03:37 PM Revision 8ad5fa2c (cdmlib): renaming remaining EntityValidationResult -> EntityValidation in cdmlib-persistence (III)
- 03:32 PM Revision aad7740d (cdmlib): renaming remaining EntityValidationResult -> EntityValidation in cdmlib-persistence (II)
- 03:26 PM Revision a147145a (cdmlib): renaming remaining EntityValidationResult -> EntityValidation in non Java files
- 03:20 PM Revision 44f55f49 (taxeditor): - added double click for type designations
- 03:15 PM Revision b44fbfe0 (cdmlib): renaming remaining EntityValidationResult -> EntityValidation in cdmlib-services
- 03:13 PM Revision 7049c8a0 (cdmlib): renaming remaining EntityValidationResult -> EntityValidation in cdmlib-persistence
- 03:09 PM Revision 3f2504fc (cdmlib): renaming remaining EntityValidationResult -> EntityValidation in cdmlib-model
- 02:32 PM Revision 9533400b (cdmlib): remove unused autowires
- 02:25 PM Revision f86be7fd (cdmlib): minor
- 10:25 AM Revision c71a894f (cdmlib): Added status column to EntityValidation table/entity
- 10:09 AM Revision 903ba4ab (cdmlib): Added status column to EntityValidation table/entity
- 10:09 AM Revision 16e30e8c (cdmlib): Added status column to EntityValidation table/entity
- 10:08 AM Revision 0917c2dc (cdmlib): Added status column to EntityValidation table/entity
- 10:04 AM Revision 32eaab23 (cdmlib)
- 10:04 AM Revision a1a5f06a (cdmlib): Added status column to EntityValidation table/entity
- 09:05 AM Revision 0cd2d7a3 (cdmlib): rename EntityValidationResult -> EntityValidation
- 09:04 AM Revision cfb501fb (cdmlib): rename EntityValidationResult -> EntityValidation
- 09:03 AM Revision f488244b (cdmlib): rename EntityValidationResult -> EntityValidation
02/17/2015
- 10:02 PM Revision 6c17dce7 (taxeditor): ticket #4575
- 05:40 PM Revision 78ef914a (cdmlib): revert temp changes in JdbcDaoUtils
- 05:36 PM Revision e16b1fc9 (cdmlib): merge trunk into validation branch
- 05:31 PM Revision 314969f7 (cdmlib): temporary changes, committed for being able to merge trunk
- 05:27 PM Revision f3b32059 (cdmlib): reduce logging for ranks
- 04:46 PM Revision 3e592557 (taxeditor): implemented new method in interface
- 04:45 PM Revision 0ddb8392 (taxeditor): CdmTransientEntityCacher, EntityCacherDebugResult : moved debug methods to debug result class
- ProxyUtils : new class for util methods to do with hibernate proxy objects
ICdmEntitySessionEnabled, CdmEntitySession... - 03:16 PM Revision 7e5f46c8 (taxeditor): - removed non-relevant context-menu option for classification (#4646)
- 02:57 PM Revision 0ad07a1c (taxeditor): - fixed lazy init problem in bulk editor (#4655)
- 01:44 PM Revision 8c64fe31 (taxeditor): - added missing transient service methods
- 01:09 PM Revision 56b2c5b8 (taxeditor): show media information for taxa in bulk editor
- 12:57 PM Revision 5a1e6d75 (cdmlib)
- 12:43 PM Revision e544dc43 (cdmlib): - fixed paging for compressed specimen table
- 12:43 PM Revision 703e8efc (taxeditor): CdmRemoteCacheManager : added cache getter methods
- CdmTransientEntityCacher, CdmEntitySession, CdmEntitySessionManager, ICdmEntitySession, ICdmEntitySessionManager, ICd...
- 11:20 AM Revision 688201de (cdmlib): - added pager to associated field units service method
- 11:20 AM Revision 4cb163f8 (cdm-dataportal): - added pager to associated field units service method
- 11:14 AM Revision 45f483b0 (cdmlib): remove default validation context for TNCannotBeTaxonAndSynonym
- 10:09 AM Revision 52cb78b3 (taxeditor): change Password returns different messages for different problems
- 09:51 AM Revision 148679e6 (taxeditor): - added option to toggle the delete configurator parameters in taxon deletion dialog (#4656)
- 09:47 AM Revision a856be7c (taxeditor): ticket #4655
- 03:31 AM Revision 17635d0f (cdmlib): cleaning up and fixing validators
- 12:42 AM Revision 1f31ca4f (cdmlib): some bugfixes for validation management
02/16/2015
- 03:57 PM Revision 472cd59d (taxeditor): remove explicit listener registration for validation
- 03:56 PM Revision a89f8b6b (cdmlib): refactor validation listener, add base class and transactional level 3 listener
- 03:44 PM Revision a3dacfd7 (cdmlib): clean up FirstDataInserter
- 03:43 PM Revision 6d6a9a0c (cdmlib): clean up cdmApplicationController docu
- 02:57 PM Revision e9a587e7 (taxeditor): - added configurator settings to taxon deletion dialog
- 02:31 PM Revision b4e7d6e9 (cdmlib): make taxon node tests null safe
- 12:09 PM Revision fc51ed3b (cdmlib)
- 11:16 AM Revision 79d6b483 (cdmlib)
02/13/2015
- 06:51 PM Revision 044f8351 (cdmlib): fix incorrect default validation groups
- 05:25 PM Revision 7cf5e97c (cdmlib): make test data compile again
- 03:03 PM Revision eb62c07a (taxeditor): add prelimary triggering for listener registering
- 02:48 PM Revision 5e1b3244 (cdmlib): update Level3 validations (add default class) and update TaxonNode validations (from taxonomically included to taxonNode usage)
- 02:04 PM Revision bf2d0f3e (cdmlib): add validationGroup to save parameters
- 01:17 PM Revision 3e4f1a6f (cdmlib): change validationGroup attribute name
- 01:05 PM Revision 78436b19 (taxeditor): add commented validationManager to test app context
- 12:12 PM Revision 04c415dc (cdmlib): fix SQL EntityValidationResultCrudJdbcImpl for update
- 11:17 AM Revision bc307e4f (taxeditor): adding validation package to exported packages (to include ValidationManager)
- 10:30 AM Revision 093f50a4 (cdmlib): commit after merge
- 10:16 AM Revision ee51559f (cdmlib): minor
- 09:35 AM Revision 5dcf95e8 (cdmlib): @Ignore BatchValidator test
02/12/2015
- 04:51 PM feature request #4639 (Resolved): Show quantitative data correctly in Data portal (for Cyprus portal)
- Replying to [[comment9|a.mueller]]:
> Replying to [[comment7|a.kohlbecker]]:
> > implemented by r22760
> >
> > a... - 04:50 PM Revision 3fbf0e26 (cdm-dataportal): better placement of modifiers and inconsistency checks for #4639
- 04:07 PM Revision b4b6e2a2 (cdmlib)
- 04:07 PM Revision ddd7ec59 (cdmlib)
- 12:41 PM Revision 737c8980 (cdmlib): minor
- 11:10 AM Revision 4ccfe8eb (cdmlib): latest changes to Markup import
- 11:07 AM Revision a4eb973c (cdmlib): minor
- 10:28 AM Revision b4f8d3f4 (cdmlib): moved flockSearch from checklistDemoController to TaxonController and renamed it to inlucdedTaxa
- 09:47 AM Revision ec25be77 (taxeditor): CdmTransientEntityCacher : overriding cache field only in the case of initialised cdm entity
- CdmEntitySession, ICdmEntitySession, MockCdmEntitySession : added update + delete methods
DeleteSynonymOperation, Mov...
02/11/2015
- 02:34 PM Revision a292e8a7 (cdmlib): added validationcount & lastmodified columns to entityvalidationresult tables and refactored DAO and Service with new persistency logic for errors
- 02:33 PM Revision 2898f00d (cdmlib): added validationcount & lastmodified columns to entityvalidationresult tables and refactored DAO and Service with new persistency logic for errors
- 02:33 PM Revision 24609d31 (cdmlib): added validationcount & lastmodified columns to entityvalidationresult tables and refactored DAO and Service with new persistency logic for errors
- 02:31 PM Revision 9b863a41 (cdmlib): added validationcount & lastmodified columns to entityvalidationresult tables and refactored DAO and Service with new persistency logic for errors
- 02:31 PM Revision 700f5ddc (cdmlib)
- 02:23 PM Revision ef52cdd5 (cdmlib): add UpdateResult and make DeleteResult a subclass
- 02:23 PM Revision a0bd02a0 (cdmlib)
- 02:08 PM Revision 5456ab19 (taxeditor): MultiPageTaxonEditor : added cdm entity session capabilities to update and register data changes
- TaxonNavigator, TaxonNavigatorDataChangeBehavior : added refreshing of specific objects
MoveFactualDataHandler : move... - 02:03 PM Revision c7d830cc (taxeditor): CdmModelCacher : added recursive search in super classes
- CdmTransientEntityCacher : corrected caching
EntityCacherDebugResult : new debug result object
CdmEntitySession, ICdm... - 01:40 PM Revision e61357e5 (cdmlib): minor
02/10/2015
- 09:52 PM feature request #4639: Show quantitative data correctly in Data portal (for Cyprus portal)
- Replying to [[comment7|a.kohlbecker]]:
> implemented by r22760
>
> all modifieres belonging to the min max averag... - 09:51 PM feature request #4639: Show quantitative data correctly in Data portal (for Cyprus portal)
- Replying to [[comment6|a.kohlbecker]]:
> was machen wir denn mit den möglichen 'modifiers' die an DescriptionElement... - 05:58 PM feature request #4639: Show quantitative data correctly in Data portal (for Cyprus portal)
- implemented by r22760
all modifieres belonging to the min max average values are just appended to the string.
*TO... - 05:31 PM feature request #4639: Show quantitative data correctly in Data portal (for Cyprus portal)
- was machen wir denn mit den möglichen 'modifiers' die an DescriptionElement selbst aber auch an den einzelnen statist...
- 05:56 PM Revision a526a094 (cdm-dataportal): implementation of #4639 (Show quantitative data correctly in Data portal (for Cyprus portal)) ready
- 05:05 PM Revision 9597e839 (cdmlib-apps): Updates for Fl ot Guianas import
02/09/2015
- 05:06 PM feature request #4639: Show quantitative data correctly in Data portal (for Cyprus portal)
- another commit I forgot to mention:
[adding missing statisticalValues to init strategy]() r22758
- 04:58 PM feature request #4639 (In Progress): Show quantitative data correctly in Data portal (for Cyprus portal)
- implemented (r22755) generically not nicely compacted as first step
- 05:05 PM Revision 18d9db69 (cdmlib): adding missing statisticalValues to init strategy, related to #4639 (Show quantitative data correctly in Data portal (for Cyprus portal))
- 05:05 PM Revision 4aa0d117 (cdmlib): typo
- 04:56 PM Revision e441f808 (cdm-dataportal): fixing the annotation and source display for IndividualsAssociation, TaxonInteraction, CategoricalData
- 04:56 PM Revision 0686f307 (cdm-dataportal): implementing generic display of quantitative data, which is not nicely compacted; also fixing the annotation and source display for this description element type
- 01:26 PM feature request #4644 (New): json lib incorrectly serializes values containig the characters [, ], {, }
- for example in the cichorieae _Hedypnois Mill._ has the nomenclaturalMicroReference @[606]@, which is serialized to j...
- 11:55 AM feature request #4643 (New): make all cdm-remote urls case insensitive [DISCUSS]
- Anreas Müller suggested to make all URLs fully case insensitive.
The case sensitivity of the can cause problems ...
02/07/2015
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