Activity
From 08/21/2014 to 09/19/2014
09/19/2014
09/18/2014
- 10:51 PM Revision a009927b (cdm-dataportal): restoring source reference appearence for palmweb, this finally replaces the hard coded reference which once has been hacked into the palmweb theme
- 11:08 AM Revision 5b9eb40a (cdmlib): Ignore new Specimen Test as it fails to run in suite
- 10:49 AM Revision 03fa1508 (cdmlib): remove warn logging form media data
09/17/2014
- 06:51 PM Revision 4134e828 (cdmlib): merge-update from trunk
- 06:49 PM Revision b4426234 (cdmlib): - fixed multiple creation of subspecies nodes
- 06:13 PM Revision 2529ae12 (cdmlib): HandlingCdmEntitiesTest.java / HandlingCdmEntitiesTest.xml : Added new test to describe save, update, merge of cdm entities (mimicking remoting)
- cdmlib-remote-servlet.xml : added commented option to expose remoting
CdmIntegrationTest.java : added comment on how ... - 02:41 PM Revision 6763ae92 (taxeditor): merge-update from trunk
- 02:39 PM Revision 1c869e72 (taxeditor): merge-update from trunk
- 02:36 PM Revision e1c0af0a (cdmlib): merge-update from trunk
- 02:35 PM Revision ff7173c1 (cdmlib): - fixed the unnecessary creation of multiple references and taxon nodes in ABCD import
- - added new ABCD import test
- 09:48 AM Revision c43d0839 (taxeditor): #4389
- - unified "New Image Gallery" command and handler for TaxonEditor and BulkEditor
- Removed "Add Derived/Field Unit M...
09/16/2014
- 03:17 PM Revision b9b87c1f (cdmlib): -added CleanSweepInsertLoadStrategy to fix failing test
- 01:52 PM Revision 8b77762f (cdmlib): - refactored data structure for taxon identifications in ABCD import
- - trimming scientific names avoids creation of multiple taxa/taxon nodes
- added check for number of taxon nodes to ... - 10:37 AM Revision fa518bf8 (taxeditor): Added copy button to popup and context info to the error trace
- 09:26 AM Revision 4bd58693 (taxeditor)
- 09:01 AM Revision 244b1fad (taxeditor): - removed unused variable
- 09:01 AM Revision 84ff9559 (taxeditor): - avoid possible NPE
- 08:48 AM Revision ca8c03d8 (cdmlib): - cleaned up code
- 06:16 AM Revision 473f565e (cdmlib): - fixed typo
09/15/2014
- 04:11 PM Revision c0b39031 (taxeditor): adding options to ensure that the product .zip files are not signed
- 02:41 PM Revision ad414651 (cdmlib): fix delete taxon nodes with children
- 02:38 PM Revision 0d291022 (taxeditor): adding signing of jars to maven package phase
- P2Util : added snapshot dir to list of hardocded sites
eu.etaxonomy.taxeditor/pom.xml : added signJars and uploadRepo... - 02:24 PM Revision 30590141 (taxeditor): - removed duplicate class variable
- 02:20 PM Revision 509e269a (taxeditor): merge-update from trunk
- 02:15 PM Revision 7a33ea3e (cdmlib): merge-update from trunk
- 02:14 PM Revision ee0d5259 (cdmlib): - added resetFields() method to avoid NonUniqueObjectExceptions
- 09:54 AM Revision 543ccf33 (taxeditor): - externalized plugin.xml
- 09:53 AM Revision 3e6de1b7 (taxeditor): - fixed possible LazyInitializaitionException in DerivateLabelProvdider
09/12/2014
- 02:03 AM bug #4300: Authority form does not work under Windows
- The reason why single click was used was a requirement from the Red List Project. Florian realized that new users som...
- 12:00 AM Revision dcf17487 (cdm-dataportal): fixing #3704 (show name in source for Distributions) for all cases (nameUsedInSource & originalNameString) as well for all settings options: sorted and unsorted distributions with or without bibliography block
- 12:00 AM Revision 31b96b91 (cdm-dataportal): removing old bibliography block which was originally dveloped for palmweb
09/11/2014
- 06:35 PM Revision bac37a8f (cdm-dataportal): avoiding php Notices
- 05:22 PM Revision 44d445c0 (cdm-dataportal): refactoring the handling of annotations, sources and name in source information. cleaner and simpler code, less complex statements and preserving at the same time existing output, except that the ticket #2288 (Cyprus: ChromosomeNumbers: formating nameInSource) has been solved
- 04:10 PM Revision 6b8e9bf0 (taxeditor): added CET to end of build date
- 02:29 PM Revision 29abeaf8 (cdmlib): bugfix for null rank in #4374
- 02:07 PM Revision 3b7ab2f9 (taxeditor): set org.eclipse.update.reconcile to false to avoid logging of bundle already being installed errors
- 02:05 PM Revision 6d735eab (cdmlib): update javadoc for OrderedTermBase.compareTo
- 02:02 PM Revision 79d8b2c8 (cdmlib): minor javadoc
- 01:52 PM Revision 03e6ed71 (cdmlib): remove generics
- 01:21 PM Revision 565ed3cc (cdmlib): compare classes instead of voc
- 12:44 PM Revision 932b70fe (cdmlib): add override
- 12:20 PM Revision 6d71634a (cdmlib): generics
- 12:11 PM Revision 04cb7056 (cdmlib): typos
- 12:02 PM Revision 1ace2294 (cdmlib): overwrite the performCompareTo method in PresenceAbsenceTermBase for a comparison of presence and absence terms (presence terms are sorted before absence terms)
- 10:45 AM Revision ce2778dd (taxeditor): added caused by to multistatus error dialog
09/10/2014
- 04:37 PM Revision ee7d980d (taxeditor): OpenDefinedTermEditorHandler : changed error dialog to warning since there is no exception
- CdmErrorDialog : changed copy item text to avoid confusion
MessagingUtils : cleanup and added MultiStatus errorDialog... - 04:22 PM Revision d4e8f64c (cdmlib): handle null name
- 04:01 PM Revision 35fc9327 (cdmlib): - fixed case where a DerivedUnit is given as method parameter -> needed also to check for parent FieldUnits
- 03:14 PM Revision 3def8aa5 (taxeditor): - set ABCD import config to also import media attached to specimens as MediaSpecimen
- 03:12 PM Revision 6b71d584 (taxeditor): - reverted accidentally removed methods due to merge with trunk
- - adapted version number in MANIFEST.MF
- 03:01 PM Revision 0a8972e2 (cdmlib): - reverted accidentally removed methods due to merge with trunk
- 02:57 PM Revision d98c659b (taxeditor): merge-update from trunk
- 02:56 PM Revision 69141ef6 (cdmlib): merge-update from trunk
- 02:52 PM Revision 00a62062 (taxeditor): - removed @Cascade for country in GatheringEvent because DefinedTerms should not be cascaded
- - added new service method to occurence service to find all CDM entities that are not saved via cascading
- added te... - 02:52 PM Revision 75b69afd (cdmlib): - removed @Cascade for country in GatheringEvent because DefinedTerms should not be cascaded
- - added new service method to occurence service to find all CDM entities that are not saved via cascading
- added te... - 12:47 PM Revision 0a24b81c (cdmlib-apps): typos
- 12:46 PM Revision 062bc000 (cdmlib-apps): typos
- 12:45 PM Revision bc2e58de (cdmlib-apps): typos
- 12:43 PM Revision 100aec39 (cdmlib): typos
- 12:42 PM Revision bdcef9bf (cdmlib): typos
- 12:41 PM Revision 477aa36a (cdmlib): typos
- 12:38 PM Revision 18a1cf27 (cdmlib): typos
- 12:37 PM Revision a62987da (cdmlib): typos
- 12:35 PM Revision 252e0049 (cdmlib): typos
- 11:50 AM Revision f8bcfa0d (cdmlib-apps): typos
09/09/2014
- 05:41 PM Revision 4f8e5d8d (taxeditor): added comments
- 03:55 PM Revision b5854b72 (cdm-dataportal): removing preserved special code which stemmed from the cichorieae portal - discussed in #4413 (to combine reference with microreference for bibliographic referneces )
- 03:44 PM Revision a2848f0a (cdmlib): - temporarily disabled test
- 03:28 PM Revision f2e93f2c (taxeditor): added check for entity being null
- 02:53 PM Revision e48f844f (taxeditor): added profile for uploading plugins to update site
- 02:51 PM Revision 2c2dcafa (taxeditor): eu.etaxonomy.taxeditor.product : updated start levels, added update specific arguments
- feature.xml x 2 : added dependencies for p2 updates
IPreferenceKeys : added the key to allow updates at startup
Taxon... - 02:49 PM Revision 8ca88c4e (cdm-dataportal): fixing #4412 (output of OriginalSource.idNamespace in portal missing)
- 02:48 PM Revision 025cb03a (taxeditor): mappings file for about properties
- 02:47 PM Revision 49c6e8c3 (taxeditor): P2 update implementation and editor version extraction
- ApplicationWorkbenchAdvisor : clean up
ApplicationWorkbenchWindowAdvisor : added update of editor to startup
P2Util :... - 02:41 PM Revision 3173d092 (cdmlib): - used utility method for modifier
- 02:27 PM Revision 5e581f5d (taxeditor): added new error dialog for operations
- 02:25 PM Revision 272d093f (cdm-dataportal): fixing margin above footnotes (related to #3915)
- 01:23 PM Revision 266bc333 (cdmlib): merge-update from trunk; added import preference to add media as media specimen
- 01:15 PM Revision 59be9831 (taxeditor): merge-update from trunk
- 01:07 PM Revision 848d9010 (cdmlib): - replaced save() with saveOrUpdate()
- 12:03 PM Revision da78db78 (taxeditor): - bind conversation before saving specimen
- 12:03 PM Revision 91a6d802 (cdmlib): - adpated test to model changes (cascading)
- 12:02 PM Revision 38613fbc (cdmlib): - added cascading to setOfReferences in DeterminationEvent
- 10:26 AM bug #4409 (Closed): fallback areas are not adressable in the shape file
- Lilium martagon (http://test.e-taxonomy.eu/dataportal/preview/euromed/cdm_dataportal/taxon/7ddb75d9-b5a1-4941-99e6-c8...
- 09:47 AM Revision b5e45f80 (cdmlib): - changed from MySql to H2
- 09:38 AM Revision c483dd7e (cdmlib-apps)
- 09:23 AM Revision 0c7d3099 (cdm-dataportal): fixing #4406 (feature block image gallery broken)
- 09:02 AM Revision 48ed8821 (cdmlib): - added test for saving non-cascaded CDM entities
09/08/2014
- 04:32 PM Revision abacccbf (cdm-dataportal): disabling almost obsolte theme override palmweb_2_cdm_descriptionElement_Distribution()
- 04:00 PM Revision f1f09434 (taxeditor): merge-update from trunk
- 03:57 PM Revision 5da1d38c (taxeditor): - implemented unstable DataImportView which will replace DataImportEditor
- 03:34 PM Revision 2a7820b7 (taxeditor): - added label to EmptyElement
- - added EmptyElement to NonViralNameDetailSection if taxon.getName() is null (fixes #4221)
- 03:01 PM Revision 6db07e78 (cdmlib): - fixed possible NPE
- 02:35 PM Revision a124222b (cdmlib-apps)
- 02:10 PM Revision 5091a21d (cdmlib): - adapted some save method to allow transient services (#3726)
- 11:30 AM Revision 8d151524 (cdm-dataportal): hide empty bibliography
- 10:22 AM Revision e4021a0a (cdm-dataportal): removing obsolete theme override palmweb_2_cdm_feature_nodes
- 10:14 AM Revision 9aff46e4 (cdm-dataportal): introducing the api hook cdm_feature_node_blocks_alter and removing hook_cdm_feature_node_blocks_alter, this makes theme_cdm_feature_nodes obsolte, reducing speccial code in palmweb theme
- 10:14 AM Revision dd1c109a (cdm-dataportal): more flexible table of content creation, hook_cdm_feature_node_toc_items_alter() no longer needed
- 10:14 AM Revision 159cd9bb (cdm-dataportal): hiding empty feature blocks
09/05/2014
- 03:57 PM feature request #4403 (New): Handle meta data loading/validating of Media in separate thread
- if some of the MediaRepresentationParts do already have valid Media data they are frequently validated/checked by the...
- 02:08 PM Revision af29e124 (taxeditor): change labels for relationship descriptions #4087
- 09:59 AM Revision bb68e567 (cdmlib-apps): update PESI, eflora, app-import
- 08:50 AM Revision 0e327bed (taxeditor): - moved toggle button to the top-right corner of the Media(Specimen)Section (#3339)
- - Changed label
09/04/2014
- 05:32 PM Revision 3f44ae79 (taxeditor): Snapshot branch for version 3.3.8-SNAPSHOT
- 05:32 PM Revision ed6e20d7 (taxeditor): Updated version in config files to 3.3.8-SNAPSHOT
- 05:06 PM Revision 14f96448 (taxeditor): Updated version in config files to 3.3.7
- 04:56 PM Revision 119b350e (cdm-server): [maven-release-plugin] prepare for next development iteration
- 04:56 PM Revision ebdce677 (cdm-server): [maven-release-plugin] prepare release cdm-server-3.3.7
- 04:38 PM Revision b40a74dc (cdmlib): [maven-release-plugin] prepare for next development iteration
- 04:38 PM Revision e96b8d94 (cdmlib): [maven-release-plugin] prepare release cdmlib-parent-3.3.7
- 02:11 PM task #4338 (In Progress): [MASTER] Handle abbreviated title and protected cache correctly in TaxEditor
- 11:49 AM Revision 9e33b678 (cdmlib): added FEATURE_STORE to be compliant with XML-IMPORT for cdmlib-app
- 11:39 AM Revision e8534b1d (cdmlib): reverting hack related to #4368 (caching api causes bug in Rank.getAbbreviation())
- 11:39 AM Revision b5cf3508 (cdmlib): updating TODO
- 10:33 AM Revision d8bed5d9 (cdmlib): added check for null cdm entity when putting default terms in cache
- 09:23 AM Revision 170726d7 (taxeditor): - added full square as replacement for control characterers (#2248)
- - added flag to TextWithLabelElement to allow multi-line behavior
- changed description labels (#4087)
- renamed me...
09/03/2014
- 06:34 PM Revision 731f8a84 (cdmlib): added possiblity to initialise some specific terms (like default language) which could be called outside a session
- 05:25 PM Revision 62617091 (taxeditor): Renamed label "Messages" to "Error Log"
- 02:55 PM feature request #3630: Taxeditor should add mimetype of mediaRepresentations automatically
- the mime type of media is important because the dataportal decides based on the mime type how to handle the media ent...
- 02:42 PM feature request #3630: Taxeditor should add mimetype of mediaRepresentations automatically
- I will investigate the need for having the mime type of images in the database.
- 08:52 AM Revision 487f61bf (taxeditor): - added filter button to setEnabled()
- 08:51 AM Revision 209906a0 (taxeditor): - fixed possible ClassCastException
09/02/2014
- 06:14 PM bug #4390 (Closed): Titlecache of field unit does not update when changing field unit data via derived unit facade
- What I did in TaxEditor
* for some existing derived unit with field unit attached I updated the "locality" in th... - 04:54 PM Revision f2a5f604 (cdmlib): some generics
- 04:51 PM Revision cf6f9551 (cdmlib): minor
- 04:22 PM Revision 42db36e1 (cdmlib): add identifiers to hibernate.cfg
09/01/2014
- 04:04 PM Revision 9ddd690d (taxeditor): - fixed typo
- 03:46 PM Revision f64f95af (cdmlib): - fixed parsing of elevation in GBIF response
- 02:59 PM Revision da04e963 (cdm-dataportal): hiding all footnote keys in palmweb portal
- 02:23 PM feature request #4383 (New): multiple issues with de-duplication of references in bibliography
- the bibliography is assembled by making use of the cdm datportal footnote system. The FootnoteManager is not fully de...
- 12:24 PM Revision f3a04cfa (cdm-dataportal): fixing the feature block layout, footnotes and bibliography for palmweb, solving #4379 (Citations only consist of footnotes if bibliography block is enabled)
- 12:24 PM Revision 790e9c91 (cdm-dataportal): additional test
- 12:24 PM Revision fa782b11 (cdm-dataportal): fixing bug in plamweb, and renaming sort mode constant
- 10:49 AM Revision 72996734 (taxeditor): - implemented functionality to reuse media in MediaView (#2385)
- 10:35 AM Revision 6a822179 (taxeditor): - fixed removing of control characters (fixes #4373, affects #2248)
- - added condition to only replace if the string contains control characters
- cursor will still jump back but only... - 09:52 AM Revision a1d6c6e3 (taxeditor): - added javadoc
08/29/2014
- 01:50 PM Revision 6f5c7f2a (cdm-dataportal): fixing #1933 (DescriptionElementBases do not show annotation footnotes in flora malesiana portal)
- 01:50 PM Revision 7df49bf1 (cdm-dataportal): removing replaced theme function
08/28/2014
- 04:28 PM Revision 22f5e82d (cdm-dataportal): refactoring theme_cdm_descriptionElementTextData() #3484 , mock implementation of feature block settings #3257, solves most issues of #3915 (handling of annotations and sources inconsistent in theme_cdm_descriptionElementTextData)
- 02:15 PM bug #4377 (Closed): LazyInitializationException (LIE) related to Team.teamMembers when calling portal/taxon.json
- http://160.45.63.175/cdmserver/palmae/portal/taxon.json
request from duplicate issue:
http://api.cybertaxonomy....
08/27/2014
- 02:19 PM feature request #3904: EuroMed: Implement filtering rules for distributions
- [[on|behalf of e.raab-straube]]
Wie gesagt: es funktioniert nach wie vor nicht für die Regel, nach der die
Areale ... - 02:14 PM Revision c367b0ab (cdm-dataportal): refactoring the feature node blocks - 2 + adapting test suite
- 02:14 PM Revision 0439c8dd (cdm-dataportal): more information in case of assertion errors
- 02:14 PM Revision 28c5c87a (cdm-dataportal): refactoring the feature node blocks - 1
- 02:13 PM Revision 211709bc (cdm-dataportal): refactoring term and vocabulary functions - 2
- 02:13 PM Revision cf839840 (cdm-dataportal): fixing missing annotation footnotes of non standard types - #4370 (Annotations do not show up in Distribution and CommonName section)
- 02:13 PM Revision d8e85b2d (cdm-dataportal): refactoring term and vocabulary functions
- 02:10 PM feature request #4372 (Closed): Selenium PortalPage class also suitable for zen-basetheme
- The Selenium PortalPage class can only handle drupal node pages of the cichorieae base theme. It is not suitable for ...
08/26/2014
- 12:16 PM Revision fe3d023f (cdmlib): refactoring taxon controllers, reducing code duplication
- 11:57 AM Revision 1694322e (taxeditor): merge-update from trunk
- 11:57 AM Revision af81b213 (cdmlib): merge-update from trunk
- 11:55 AM Revision a00b2452 (taxeditor): - let media view react to selections from DerivateView
- 11:41 AM Revision 7beb1c71 (taxeditor): - renamed interal_selectionChanged() to selectionChanged_internal()
- 11:10 AM Revision 4b2e5afe (taxeditor): - moved parsing message section to top of details view (fixes #1659)
- 08:50 AM Revision 5ff3332c (taxeditor): - added property tester for context menu entries for media view (#3339)
- 08:04 AM Revision f73eb844 (taxeditor): - remove control characters from TextFields (fixes #2248)
08/25/2014
- 06:57 PM Revision 6814f4f5 (taxeditor): - added forceDirty() method to set the BulkEditor dirty when editing in MediaView #2407
- - TODO: should be replaced with the possibility to set views dirty when we move to Eclipse 4
- 02:48 PM Revision 503e6c4e (cdmlib): - commented model changes for alternatve identifiers due to exceptions when connecting to data base #4275
- 01:53 PM Revision 47f905cb (taxeditor): merge-update from trunk
- 01:53 PM Revision dfbf4979 (cdmlib): merge-update from trunk
- 12:59 PM Revision a9fd44de (taxeditor): - used native SWT checkBox button to toggle advanced view
- 10:29 AM Revision b4d54b9b (taxeditor): - separated user interface to add media into two classe (#3339)
- - added it to MediaSpecimenGeneralDetailElement
- 08:55 AM Revision a61d8cd3 (taxeditor): Added note to default language preference page to inform the user about restarting the editor after making changes to the language setting.
- 08:45 AM Revision 86cc5c9a (taxeditor): refactored default language selection methods.
08/22/2014
- 10:58 PM feature request #4294: order of map legend entries conforms to term order
- from email:
Hallo Eckhard,
die Reihenfolge in der Legende entspricht exakt der Priorität der Status, das ist aus z... - 04:35 PM feature request #4294: order of map legend entries conforms to term order
- Hi Andreas,
I think the order of map legend should be as you have described it, except:
PresenceTerm.INTRODUCED_N... - 01:31 PM feature request #4294 (Resolved): order of map legend entries conforms to term order
- fixed by: r21566, r21565
Hi Eckhard,
the order of the map legend entries should correct now, except of course of ... - 07:19 PM Revision c71d712f (taxeditor): Indirect dependency from bioinfweb.commons added.
- 02:52 PM feature request #3904: EuroMed: Implement filtering rules for distributions
- Replying to [[comment23|a.kohlbecker]]:
> Replying to [[comment21|a.kohlbecker]]:
>
> >
> > Bellis perennis:
... - 02:05 PM feature request #3904: EuroMed: Implement filtering rules for distributions
- Replying to [[comment21|a.kohlbecker]]:
>
> Bellis perennis:
> * Slovakia kommt vor also Former Czechoslovaki... - 02:50 PM Revision d7016168 (cdmlib): fixing prefer specific distributions for #3904 (EuroMed: Implement filtering rules for Distributions), status=null was ereoneously preferred
- 01:26 PM Revision 0cd56d82 (cdmlib): solving #4294 (order of map legend entries conforms to term order)
- 01:23 PM Revision c135abd7 (cdmlib): first attempt to fix #4294 (order of map legend entries conforms to term order)
- 01:20 PM Revision f52b07f3 (cdmlib): adding @Transient to new API methods introduced for #3327 (better API for OrderedTermBase and OrderedTermVocabulary)
- 12:13 PM feature request #424: Implement advanced search
- Hi Andreas,
in the present Euro+Med Portal the "Geo-Search" is possible on each taxon from family rank downwards, e...
08/21/2014
- 08:08 PM Revision c7ff3f1a (cdmlib): minor
- 08:03 PM Revision 01871756 (cdmlib): minor
- 07:54 PM Revision 15888e8e (cdmlib): remove potential NPE in CdmDataSourceBase
- 05:24 PM Revision bdd7d687 (cdm-dataportal): fixing bug for #4294 duplicate footnotes are back
- 03:53 PM feature request #3904 (In Progress): EuroMed: Implement filtering rules for distributions
- I found something interesting in the source code:
The exact description of the **subAreaPreference** rule is lik... - 03:19 PM feature request #3904: EuroMed: Implement filtering rules for distributions
- Hallo Eckhard,
Im ticket werden drei filter regeln genannt:
1. Filter out distributions for areas which have a Ma... - 02:23 PM Revision 343833a4 (cdmlib): fix the test
- 12:45 PM Revision 85da6838 (cdmlib): isDeletable ignores relations of identifiableEntity
- 11:53 AM feature request #4366: Transmissionengine Distribution: implement rules for source references
- Hallo Andreas,
dem letzten Satz kann ich zustimmen: " es wäre in diesem Fall richtig nur die Quellen von Scorzoner... - 11:53 AM feature request #4366 (Duplicate): Transmissionengine Distribution: implement rules for source references
- _Scorzoneroides autumnalis_ subsp. borealis hat Verbreitungsangeben für die Czech Republic, mit zwei Referenzen:
*... - 11:31 AM feature request #424: Implement advanced search
- Hi Eckhard I only could find the mentioned search options in them Med-Checklist-Portal: http://ww2.bgbm.org/mcl/query...
- 11:19 AM feature request #424: Implement advanced search
- Hallo,
soweit ich weiß, ist folgendes Feature noch nicht implementiert, ich weiß auch nicht, ob es dazu schon ein T... - 11:15 AM Revision ddbe9821 (taxeditor): Initial height distribution implemented in AlignmentEditor.
- 09:52 AM Revision 1987e065 (taxeditor): - generalized simple user interface to add media (#3339)
- 09:52 AM Revision 04e1aa91 (cdmlib): - generalized simple user interface to add media (#3339)
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