Activity
From 08/05/2014 to 09/03/2014
09/03/2014
- 06:34 PM Revision 731f8a84 (cdmlib): added possiblity to initialise some specific terms (like default language) which could be called outside a session
- 05:25 PM Revision 62617091 (taxeditor): Renamed label "Messages" to "Error Log"
- 08:52 AM Revision 487f61bf (taxeditor): - added filter button to setEnabled()
- 08:51 AM Revision 209906a0 (taxeditor): - fixed possible ClassCastException
09/02/2014
- 04:54 PM Revision f2a5f604 (cdmlib): some generics
- 04:51 PM Revision cf6f9551 (cdmlib): minor
- 04:22 PM Revision 42db36e1 (cdmlib): add identifiers to hibernate.cfg
09/01/2014
- 04:04 PM Revision 9ddd690d (taxeditor): - fixed typo
- 03:46 PM Revision f64f95af (cdmlib): - fixed parsing of elevation in GBIF response
- 02:59 PM Revision da04e963 (cdm-dataportal): hiding all footnote keys in palmweb portal
- 12:24 PM Revision f3a04cfa (cdm-dataportal): fixing the feature block layout, footnotes and bibliography for palmweb, solving #4379 (Citations only consist of footnotes if bibliography block is enabled)
- 12:24 PM Revision 790e9c91 (cdm-dataportal): additional test
- 12:24 PM Revision fa782b11 (cdm-dataportal): fixing bug in plamweb, and renaming sort mode constant
- 10:49 AM Revision 72996734 (taxeditor): - implemented functionality to reuse media in MediaView (#2385)
- 10:35 AM Revision 6a822179 (taxeditor): - fixed removing of control characters (fixes #4373, affects #2248)
- - added condition to only replace if the string contains control characters
- cursor will still jump back but only... - 09:52 AM Revision a1d6c6e3 (taxeditor): - added javadoc
08/29/2014
- 01:50 PM Revision 6f5c7f2a (cdm-dataportal): fixing #1933 (DescriptionElementBases do not show annotation footnotes in flora malesiana portal)
- 01:50 PM Revision 7df49bf1 (cdm-dataportal): removing replaced theme function
08/28/2014
08/27/2014
- 02:14 PM Revision c367b0ab (cdm-dataportal): refactoring the feature node blocks - 2 + adapting test suite
- 02:14 PM Revision 0439c8dd (cdm-dataportal): more information in case of assertion errors
- 02:14 PM Revision 28c5c87a (cdm-dataportal): refactoring the feature node blocks - 1
- 02:13 PM Revision 211709bc (cdm-dataportal): refactoring term and vocabulary functions - 2
- 02:13 PM Revision cf839840 (cdm-dataportal): fixing missing annotation footnotes of non standard types - #4370 (Annotations do not show up in Distribution and CommonName section)
- 02:13 PM Revision d8e85b2d (cdm-dataportal): refactoring term and vocabulary functions
08/26/2014
- 12:16 PM Revision fe3d023f (cdmlib): refactoring taxon controllers, reducing code duplication
- 11:57 AM Revision 1694322e (taxeditor): merge-update from trunk
- 11:57 AM Revision af81b213 (cdmlib): merge-update from trunk
- 11:55 AM Revision a00b2452 (taxeditor): - let media view react to selections from DerivateView
- 11:41 AM Revision 7beb1c71 (taxeditor): - renamed interal_selectionChanged() to selectionChanged_internal()
- 11:10 AM Revision 4b2e5afe (taxeditor): - moved parsing message section to top of details view (fixes #1659)
- 08:50 AM Revision 5ff3332c (taxeditor): - added property tester for context menu entries for media view (#3339)
- 08:04 AM Revision f73eb844 (taxeditor): - remove control characters from TextFields (fixes #2248)
08/25/2014
- 06:57 PM Revision 6814f4f5 (taxeditor): - added forceDirty() method to set the BulkEditor dirty when editing in MediaView #2407
- - TODO: should be replaced with the possibility to set views dirty when we move to Eclipse 4
- 02:48 PM Revision 503e6c4e (cdmlib): - commented model changes for alternatve identifiers due to exceptions when connecting to data base #4275
- 01:53 PM Revision 47f905cb (taxeditor): merge-update from trunk
- 01:53 PM Revision dfbf4979 (cdmlib): merge-update from trunk
- 12:59 PM Revision a9fd44de (taxeditor): - used native SWT checkBox button to toggle advanced view
- 10:29 AM Revision b4d54b9b (taxeditor): - separated user interface to add media into two classe (#3339)
- - added it to MediaSpecimenGeneralDetailElement
- 08:55 AM Revision a61d8cd3 (taxeditor): Added note to default language preference page to inform the user about restarting the editor after making changes to the language setting.
- 08:45 AM Revision 86cc5c9a (taxeditor): refactored default language selection methods.
08/22/2014
- 07:19 PM Revision c71d712f (taxeditor): Indirect dependency from bioinfweb.commons added.
- 02:50 PM Revision d7016168 (cdmlib): fixing prefer specific distributions for #3904 (EuroMed: Implement filtering rules for Distributions), status=null was ereoneously preferred
- 01:26 PM Revision 0cd56d82 (cdmlib): solving #4294 (order of map legend entries conforms to term order)
- 01:23 PM Revision c135abd7 (cdmlib): first attempt to fix #4294 (order of map legend entries conforms to term order)
- 01:20 PM Revision f52b07f3 (cdmlib): adding @Transient to new API methods introduced for #3327 (better API for OrderedTermBase and OrderedTermVocabulary)
08/21/2014
- 08:08 PM Revision c7ff3f1a (cdmlib): minor
- 08:03 PM Revision 01871756 (cdmlib): minor
- 07:54 PM Revision 15888e8e (cdmlib): remove potential NPE in CdmDataSourceBase
- 05:24 PM Revision bdd7d687 (cdm-dataportal): fixing bug for #4294 duplicate footnotes are back
- 02:23 PM Revision 343833a4 (cdmlib): fix the test
- 12:45 PM Revision 85da6838 (cdmlib): isDeletable ignores relations of identifiableEntity
- 11:15 AM Revision ddbe9821 (taxeditor): Initial height distribution implemented in AlignmentEditor.
- 09:52 AM Revision 1987e065 (taxeditor): - generalized simple user interface to add media (#3339)
- 09:52 AM Revision 04e1aa91 (cdmlib): - generalized simple user interface to add media (#3339)
08/20/2014
- 11:23 PM Revision 800ff2b0 (cdm-dataportal): two improvements for #4314 (taxon page: display of bibliography in a block on the taxon page)
- 10:59 PM Revision bcdd92e5 (cdm-dataportal): .gitignore
- 10:59 PM Revision 5611d467 (cdm-dataportal): final implementation of #4314 (taxon page: display of bibliography in a block on the taxon page)
- 10:59 PM Revision f19f47fa (cdm-dataportal): basic implementation of #4314 (taxon page: display of bibliography in a block on the taxon page)
- 06:23 PM Revision c21686a3 (taxeditor): remove logging for DerivedUnitFacadeNotSupportedException as it is handled #3846
- 05:03 PM Revision dfcde26e (taxeditor): Handle null object in StoreUtil.getCdmEntity
- 05:01 PM Revision e9a2a0fa (taxeditor): - added toggle button to simple media user interface (#3339)
- 05:00 PM Revision 310e8ec9 (taxeditor): - added finally-clause for asynchronous delay flag
- #2754
- 04:04 PM Revision 4afd9d97 (taxeditor): Added Default Language Selection for the TaxonomicEditor to fix #4358
- 03:34 PM Revision a4e75107 (cdmlib-apps)
- 03:24 PM Revision e5920e99 (cdmlib-apps)
- 02:58 PM Revision d53c2846 (cdmlib)
- 02:55 PM Revision a2e83464 (taxeditor)
- 02:55 PM Revision a8b5b639 (taxeditor): DeleteResult handling in DeleteSynonymOperation
- 12:09 PM Revision 4ab6b519 (taxeditor): First pherogram displaying example added to the alignment editor. (Path to test resource need to be adjusted.)
- 09:56 AM Revision b12b0460 (taxeditor): merge-update from trunk
- 09:17 AM Revision 34b66889 (cdmlib): - assured image order for images from image galleries #3242
08/19/2014
- 06:14 PM Revision 16c6f5da (cdm-dataportal): - fixed profile image test after fixing the profile image in for #3242
- - made regex case-insensitive with (?i)
- 05:14 PM Revision 5a449d16 (cdmlib): - changed HashMap to LinkedHashMap to keep order of insertion
- - this should fix #3242
- 04:54 PM Revision 6d5812d1 (cdmlib): first implementation of alternative identifier #4275
- 04:35 PM Revision 1351da13 (cdmlib): remove old and misleading titleCache length
- 04:27 PM Revision 88f061f8 (cdmlib): minor
- 04:26 PM Revision 891ae7a8 (cdmlib): remove TODO
- 03:35 PM Revision 23467471 (taxeditor): merge-update from trunk
- 03:35 PM Revision 1bf80c0c (taxeditor): merge-update from trunk
- 03:32 PM Revision 76ae0e9e (cdmlib): merge-update from trunk
- 03:32 PM Revision cc6830e9 (cdmlib): merge-update from trunk
- 02:11 PM Revision 664bf591 (cdmlib): updating team
- 01:16 PM Revision 6c0e98ad (taxeditor): eclipse preference changes
- 11:26 AM Revision 7f4e468b (taxeditor): - adapted to changes in messaging framework
- 11:15 AM Revision ccc940f9 (taxeditor): merge-update from trunk
- 10:01 AM Revision 1661447d (cdmlib): fix jenkins
- 09:45 AM Revision ba337159 (taxeditor)
- 09:22 AM Revision 2832a925 (taxeditor): - implemented asynchronous selection changed event for subclasses of AbstractCdmEditorViewPart
- - all sub classes must implement internal_selectionChanged() method where the usual selection handling is done
- t... - 09:07 AM Revision a062eb51 (taxeditor): - fixed possible NPE
- 09:06 AM Revision 5c816462 (taxeditor): - added missing @Override
- - fixed use of static method
08/18/2014
- 10:34 PM Revision d4463068 (taxeditor)
- 10:31 PM Revision 514ac41a (cdmlib)
- 10:01 PM Revision 012b93ce (cdmlib)
- 04:58 PM Revision be3acbaa (cdmlib): add vol to generic infereference formatting
- 04:53 PM Revision 355c087a (taxeditor): - fixed possible IllegalStateException (#4351)
- 04:38 PM Revision 12f992a2 (taxeditor): - added null check (fixes #4351)
- 02:58 PM Revision 0b4f3649 (cdm-dataportal): typo
- 02:57 PM Revision 0dbb43aa (taxeditor): - fixed persistent saving of media of a MediaSpecimen (#3339)
- 02:46 PM Revision dcd1f0e0 (cdm-dataportal): diabling context menu and adding correct uri to href - sovles probelm mentioned in comments to #4312 ([E+M] strange search result entries in turn to simple search for Anthyllis hamo*)
- 02:34 PM Revision 092af624 (cdmlib-apps): minor
- 01:28 PM Revision ffa56d68 (taxeditor): - implemented setFocus() of all EditorParts
- - this is to avoid "java.lang.Exception: java.lang.RuntimeException: WARNING: Prevented recursive attempt to activate...
- 10:29 AM Revision 25bda2aa (cdmlib-apps): minor
- 10:29 AM Revision 7d2fdad7 (cdmlib-apps): add pesi euromed test db do destinations
- 10:28 AM Revision cadcee6c (taxeditor): - adapted to interface changes in cdmlib
- 10:14 AM Revision 2bfe249f (taxeditor): - added simple user interface to add media (#3339)
- 10:07 AM Revision c9203353 (taxeditor): - fixed adding of child to parent ICdmFormElement in else clause
- 09:58 AM Revision d0e1f771 (cdmlib)
- 09:53 AM Revision d2b6e0d7 (cdmlib-apps): index fungorum import of infraspecific taxa
08/15/2014
- 10:17 PM Revision 4a3ca6ee (cdmlib-apps): add SQLQuery to validation
- 06:14 PM Revision 1b9ae425 (taxeditor): MessagingUtils : added option for displaying contact message in the error dialog
- ApplicationWorkbenchAdvisor : using new method with contact message
AbstractBulkEditorInput : added errorDialog for M... - 05:31 PM Revision 35a95f17 (taxeditor): ApplicationWorkbenchAdvisor : added comments
- EditPasswordElement : Added to make sure user exists in db before changing password
UserDetailElement : Disabled user... - 04:30 PM Revision 8377e3c8 (cdmlib-apps): minor
- 04:17 PM Revision fb197bd2 (cdmlib-apps): add RefDetail filter
- 04:15 PM Revision 8fe75d91 (cdmlib-apps): minor
- 04:13 PM Revision 631fa902 (cdmlib-apps): print query
- 04:12 PM Revision 56d1546c (cdmlib-apps): updates on RefDetail and RelName import from BM
08/14/2014
- 12:38 PM Revision 666164d5 (taxeditor): New class for logging and dialog functionality
- 12:32 PM Revision 41e2f693 (taxeditor): Moved all logging and dialog functionality to the new class MessagingUtils.
- Refactoring code to adapt to above change.
Added new custom error dialog - CdmErrorDialog
Added runtime exception han...
08/13/2014
- 04:11 PM Revision 1df97417 (cdmlib): - changed initialization of CDM entities
- - fixed typo
- 04:11 PM Revision f4473802 (cdmlib): - replaced using the dao with using the service for taxa
- 04:08 PM Revision dc267bb0 (cdmlib): - fixed typo
- 02:07 PM Revision 4db49a38 (taxeditor): reintegrated redlist branch into trunk
- 11:26 AM Revision 0eafce3b (taxeditor): merge-update from trunk
- 11:25 AM Revision 61fe5874 (cdmlib): merge-update from trunk
- 11:22 AM Revision 60f606b4 (taxeditor): - adapted to Interface
- 11:21 AM Revision c07d838e (cdmlib): - finished DerivateHierarchyDTO citation
- 09:27 AM Revision e1d889f3 (cdm-dataportal): style
- 12:24 AM Revision 394de4de (cdmlib-apps): minor updates to BM validation
08/12/2014
- 05:15 PM Revision 9c9d11f7 (cdm-dataportal): fixing multiple issues for #4312 ([E+M] strange search result entries in turn to simple search for Anthyllis hamo*)
- 12:35 PM Revision 94971167 (taxeditor): Example object demonstrating pherogram and alignment data to be stored in CDM added.
- 10:33 AM Revision 23dc9c55 (cdmlib): isAncestor() using treeIndex
08/11/2014
- 03:41 PM Revision 0ccff120 (taxeditor): BulkEditorQuery udpate
- 03:38 PM Revision cf094fb4 (taxeditor): update ReferenceDetailElement
- 03:28 PM Revision 539e7168 (cdmlib): gitignore
- 03:17 PM Revision 7dfd3ab3 (cdmlib-apps): updates to PESI E+M area export
- 03:15 PM Revision 14f21806 (cdmlib): missing update
- 03:03 PM Revision ee537bcd (cdmlib): better handling of abbreviated title cache in references, series -> seriesPart and some improvements in the reference cache strategies #4280, #4239 , changes in tests
- 02:56 PM Revision d4657a24 (cdmlib): better handling of abbreviated title cache in references, series -> seriesPart and some improvements in the reference cache strategies #4280, #4239
- 02:28 PM Revision 8adac298 (taxeditor): merge-update from trunk
- 02:22 PM Revision 73a09d3f (taxeditor): merge-update from trunk
- 02:22 PM Revision 01538dbf (cdmlib): merge-update from trunk
- 02:16 PM Revision 87e3cc73 (cdmlib-apps): Add classification name to E+M
- 02:16 PM Revision 33a1af9c (cdmlib): - restructured derivate hierarchy query
- - step 1: get associated field units for a taxon (taxon service)
- step 2: assemble derivate hierarchy for each fi... - 02:07 PM Revision dabfc01b (cdm-dataportal): solving #4309 ([E+M] hide synonymy in taxon page toc) and also changing the featureTOC into page-toc
- 01:43 PM Revision cb3409ef (cdmlib): - added timeout and null check
- 09:47 AM Revision 6734b1f5 (cdmlib-apps)
08/08/2014
- 11:30 PM Revision 1c215f0d (taxeditor): adapt to new return type for name authors
- 06:37 PM Revision 396346a2 (taxeditor): added possibility to show / hide uuid column
- added scrolling to the viewer
- 04:46 PM Revision abb1217f (cdmlib): Formatting for aggregates with Authors (E+M exception)
- 03:54 PM Revision abde1c30 (cdmlib): Change authorTeam types in NonViralName from INomenclaturalAuthor to TeamOrPersonBase #1489
- 03:54 PM Revision ef970f29 (cdmlib-apps): Change authorTeam types in NonViralName from INomenclaturalAuthor to TeamOrPersonBase #1489
- 03:30 PM Revision 38ee7e30 (cdm-dataportal): need to adapt test since teh footnote key now belongs to the taxon name div - second bit
- 03:12 PM Revision 4ec3466c (cdmlib): reverting test for #686 (orderindex of rank undefined) to ist original version and removing ignore since the bug is fixed now
- 03:12 PM Revision e92645b7 (cdmlib): throwing exception in case vocabulary is not found
- 03:03 PM Revision e98158a7 (cdm-dataportal): need to adapt test since teh footnote key now belongs to the taxon name div
- 02:01 PM Revision 013cb764 (cdm-dataportal): setting background color for taxon page TOC
- 02:01 PM Revision afca18d5 (cdm-dataportal): adapting test to changes in r21420 where the html element for accepted-names was turned into div
08/07/2014
- 07:38 PM Revision 49ef1b48 (cdmlib): minor
- 07:28 PM Revision 538f9071 (cdmlib): removing old ignore and FIXME #530
- 07:16 PM Revision 7f3d97b0 (cdmlib): update abbrevTitleCache in bulk update (Cont.)
- 07:15 PM Revision 6a5bfec9 (cdmlib): update abbrevTitleCache in bulk update
- 07:13 PM Revision 8b5c43d2 (cdmlib-apps): minor
- 07:12 PM Revision 0be2707d (cdmlib-apps): minor
- 07:11 PM Revision 453a2bb7 (cdmlib-apps): update JaxbExActivator for use with local file
- 07:10 PM Revision ebb955df (cdmlib-apps): series handling in BM import
- 07:09 PM Revision 1827bf2f (cdmlib-apps): handle Integers in FactsImport and add IdInSource
- 07:07 PM Revision bda7a00c (cdmlib-apps): handle Integers in CommonNamesImport
- 07:06 PM Revision 726f3b15 (cdmlib-apps): add OccurrenceNote to BM import
- 07:04 PM Revision c68501f4 (cdmlib-apps): Refine RelTaxonValidation
- 06:52 PM Revision 924613e8 (taxeditor): adapt TransientNameService
- 06:46 PM Revision cf9f226b (cdmlib): remove function tests which don't compile
- 06:42 PM Revision 730151f8 (cdmlib): generics
- 06:40 PM Revision 8b837dfe (cdmlib): remove deprecated name service getVocabulary methods
- 06:31 PM Revision de27e838 (cdmlib): minor
- 06:27 PM Revision 8687d093 (cdmlib): implement getNextHigherTerm and getNextLowerTerm #3327
- 06:25 PM Revision b26b6c51 (cdmlib): move vocabulary tests to vocabulary service and fix @Ignore, remove deprecated methods from INameService
- 05:44 PM Revision 25a82b70 (cdmlib): minor
- 05:38 PM Revision 0841e22d (cdmlib): minor
- 05:32 PM Revision 0af6ff2f (cdmlib): cleaning up CdmBase
- 04:44 PM Revision 8863eeec (taxeditor): Commenting out single click opening of name editor (ticket 4300)
- 03:09 PM Revision a6e8fe11 (cdmlib-apps): minor
- 03:08 PM Revision 0e0c8c01 (cdm-dataportal): layout improvements to compact taxon page and fixing back-to-search-results which did not respect the settings
- 01:57 PM Revision e195f728 (cdmlib): added check for non-null operation in constructors
- 11:33 AM Revision fea3c9f9 (cdmlib): moved ehcache-core version to parent pom
- 11:30 AM Revision 770e6d62 (taxeditor): MemberDetailElement : removed member label string
- EntitySelectionElement : removed " : " suffix to label string when label string is empty
- 11:27 AM Revision 42ad3aca (taxeditor): corrected behaviour when adding / saving new authorites
- 11:08 AM Revision 8ed724c1 (cdmlib): making sure operation is always initialised
- 11:07 AM Revision b66fbc28 (cdmlib): updated doc
- 11:06 AM Revision 2b16ef08 (cdmlib): moved ehcache-core version to root pom
08/06/2014
- 04:57 PM Revision b3511282 (cdmlib-apps): update destinations
- 09:20 AM Revision 5c4ad591 (taxeditor): merge-update from trunk
- 09:20 AM Revision 1930f4f9 (cdmlib): merge-update from trunk
- 08:54 AM Revision 18751b74 (taxeditor): - added type information to DTO
- - enhanced media labeling
- 08:54 AM Revision 926c75a0 (cdmlib): - added type information to DTO
- - enhanced media labeling
08/05/2014
- 04:20 PM Revision e62eae92 (taxeditor): Text encoding changed to UTF-8.
- 04:14 PM Revision 7cf1fb23 (cdmlib): - enhanced DerivateHierarchyDTO data
- 02:12 PM Revision 083ce01a (taxeditor): merge-update from trunk
- 01:46 PM Revision b79e447b (taxeditor): - fixed bug that showed double or no '&' (#4302)
- 11:25 AM Revision aafd78b0 (taxeditor): Test version of an AlignmentArea added to AlignmentEditor.
- Dependencies of LibrAlign added in provisional form.
During initial development stage you need to check out the fol... - 11:17 AM Revision ff15d0f7 (taxeditor): merge-update from trunk
- 11:17 AM Revision d0e1e5f3 (cdmlib): merge-update from trunk
- 10:15 AM Revision 448ce6bb (cdmlib): - extended dto assembly
- 10:14 AM Revision c52f3357 (cdmlib): - cleaned code
- 10:14 AM Revision 6d065581 (taxeditor): - added 3 non-editable URI text fields for DNA information
- 07:34 AM Revision b54b47aa (cdmlib): reverting erroneously committed experimental branch (swagger)
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