Activity
From 03/04/2014 to 04/02/2014
04/02/2014
- 04:08 PM Revision 3345efc0 (taxeditor): - refactored context menu for DerivateView to be programmatic instead of declarative (using plugin.xml)
- - fixed icon bug for DerivateSearchView
- 01:01 PM Revision e668c70d (taxeditor): - only show Copy/Paste context menu for SingleRead/Sequence
- 11:37 AM Revision 35a12f14 (taxeditor): - added update() method to DerivateView
- - display different icon for SingleReads linked to multiple Sequences
- 11:35 AM Revision 32f1b240 (cdmlib): - added service method to retrieve a map of SingleReads and their "hosting" Sequences
- 09:55 AM Revision f9701c48 (taxeditor): - added util method to get the TreeNode out of a selection
04/01/2014
- 06:12 PM Revision 1abe3c5d (cdm-server): bugfix for contextPathPrefix config in /etc/default/cdmserver
- 05:25 PM Revision 4b4ae204 (cdm-dataportal): post cdm uml 3.3 fix and a kludgy workaround
- 05:22 PM Revision 68c83855 (cdmlib): fixing initstrategy for #3182 (roteliste: categorical data does not show up)
- 05:14 PM Revision e425aaf7 (taxeditor): - added Copy/Paste for SingleRead->Sequence to DerivateView
- - copying actually just creates a link
- 02:16 PM Revision 8b34c942 (cdm-server): little bugfix and contextPathPrefix configurable in /etc/default/cdmserver
- 01:59 PM Revision 6b5d6452 (cdm-server): cdmserver instances can have contextpath prefix
- 01:58 PM Revision 8dddaadb (cdm-server): minor
- 10:03 AM Revision 71d89d46 (taxeditor): - fixed user message
- 09:44 AM Revision 8942ee00 (taxeditor): - added gel photo detail element to Amplification wizard
- 08:51 AM Revision 6b06a799 (taxeditor): - removed Amplification as a TreeNode from the DerivateView
- - added Amplification to DetailsView of SingleRead as an EntitySelectionElement
- 08:50 AM Revision 13d17320 (cdmlib): - added two NewInstance() methods to Amplification
- - added getUuidAndDescriptions to IAmplificationService and DAO
- 08:49 AM Revision a9d0fdf8 (taxeditor): - fixed javadoc
03/31/2014
- 02:19 PM Revision e6a339fa (taxeditor): - organize imports for new molecular services
- 02:19 PM Revision ddad535f (taxeditor): - fix cdmlib version number in .classpath (why does maven not generate this anymore?)
- - added "molecular" package to exported packages
- organize imports for new molecular services - 12:25 PM Revision 8640593e (cdmlib): add tests for treeIndex and deletion of nodes
- 11:52 AM Revision f5d25c32 (cdmlib): - bundled services for molecular data in one package
- - added more tests
- 10:25 AM Revision 4bbe7b5a (cdmlib): Generate CSV file from pojo
- 10:24 AM Revision 99d23561 (cdmlib): Generate CSV file from pojo
- 10:10 AM Revision c5bafc99 (taxeditor): - used "move derivate" methods of service layer
- - added java doc
- 10:08 AM Revision 92b43465 (cdmlib): - added IAmplificationService and ISequenceService
- - added service methods to move derivates from one to another
- added test for move method
03/29/2014
- 09:50 PM Revision ba84f3fd (cdmlib): performance improvement for listChildNodes of a taxon
- 11:38 AM Revision 52d9339a (cdmlib-apps): Bug logging for some AT import bugs
- 12:39 AM Revision 6e3976df (cdmlib-apps): update images handling for AlgaTerra
- 12:25 AM Revision ee0f082d (cdmlib-apps): voucher fix
- 12:22 AM Revision 39067586 (cdmlib-apps): new AlgaTerra Media URLs
03/28/2014
- 06:39 PM Revision 601a2066 (cdmlib): fixing #4168 (performance problem with DescriptionListPortalController.getDescriptionElementsForTaxon())
- 06:01 PM Revision 2f6ceae0 (taxeditor): Snapshot branch for version 3.3.2-SNAPSHOT
- 06:01 PM Revision ba88761a (taxeditor): Updated version in config files to 3.3.2-SNAPSHOT
- 05:28 PM Revision d3e06bb1 (taxeditor): Updated version in config files to 3.3.1
- 11:11 AM feature request #3746: Implement time period scope for description elements in TaxEditor
- no release 3.3.1 of the taxeditor so I am moving all tickets to the next milestone 3.3.2
- 11:11 AM bug #3737: Protected caches for taxa and names behave inconsistent
- no release 3.3.1 of the taxeditor so I am moving all tickets to the next milestone 3.3.2
- 11:11 AM bug #3732: adapt DerivedUnitBaseDetailElement and PreservationMethodMenuPreferences to cdm model changes
- no release 3.3.1 of the taxeditor so I am moving all tickets to the next milestone 3.3.2
- 11:11 AM feature request #3630: Taxeditor should add mimetype of mediaRepresentations automatically
- no release 3.3.1 of the taxeditor so I am moving all tickets to the next milestone 3.3.2
- 11:11 AM task #3603: Remove creation of dummy DefinedTerm when creating new Term related entities
- no release 3.3.1 of the taxeditor so I am moving all tickets to the next milestone 3.3.2
- 11:11 AM feature request #3573: Improve EDITOR import UI configuration panel
- no release 3.3.1 of the taxeditor so I am moving all tickets to the next milestone 3.3.2
- 11:11 AM bug #3536: Incorrect last version documentation for Editor
- no release 3.3.1 of the taxeditor so I am moving all tickets to the next milestone 3.3.2
- 11:11 AM feature request #3337: Correct multiple occurrences of basionym within a homotypic group
- no release 3.3.1 of the taxeditor so I am moving all tickets to the next milestone 3.3.2
- 11:11 AM bug #2957: running maven site:site for Taxonomic Editor fails
- no release 3.3.1 of the taxeditor so I am moving all tickets to the next milestone 3.3.2
- 10:55 AM Revision 5bd5c561 (cdm-server): [maven-release-plugin] prepare for next development iteration
- 10:55 AM Revision 6cb9f703 (cdm-server): [maven-release-plugin] prepare release cdm-server-3.3.1
- 10:52 AM Revision 266a897d (cdm-server): making maven-war plugin compliant to java 1.7 and adding a plugin which could fix problems with maven3 related to the waggon transport for ssh which is failing in maven 3
- 10:50 AM Revision 8c4ee935 (cdmlib-apps): update cdmapps poms
- 10:45 AM Revision 5954f04a (cdmlib-apps): handle NPE in DNAImport
- 09:53 AM Revision d6b8698e (cdmlib): [maven-release-plugin] prepare for next development iteration
- 09:53 AM Revision e6fbb601 (cdmlib): [maven-release-plugin] prepare release cdmlib-parent-3.3.1
- 01:10 AM Revision 9511e57d (cdmlib-apps): change AlgaTerra preview
03/27/2014
- 03:27 PM Revision 9edf2348 (cdmlib): debug collection and institution for excel import
- 03:26 PM Revision 0a00d1bf (cdmlib-apps): debug collection and institution for excel import
- 02:00 PM Revision 5fa985eb (cdm-dataportal): fixing #3567 (Rename all FieldObservations by FieldUnit in data portals)
- 01:52 PM Revision 06d6b7fa (cdm-dataportal): dataportal part for #3766 (Check if specimenOrObservation.kindOfUnit is shown correctly in data portal)
- 01:52 PM Revision ac8bfc49 (cdm-dataportal): documentation
- 01:51 PM Revision 5624aa7e (cdmlib): cdmlib part for #3766 (Check if specimenOrObservation.kindOfUnit is shown correctly in data portal)
- 01:34 PM Revision 69e517e3 (cdmlib): adding missing statisticalValues.* to init strategy. fixes #4165 (algaterra: values of specimen descriptions not shown)
- 01:05 PM Revision acf3a2e7 (cdm-dataportal): dataportal part of #3576 (Adapt CdmServer and Dataportal to new naming of CategoricalData.stateData)
- 01:05 PM Revision 68ab2885 (cdm-dataportal): avoiding php notice
- 01:02 PM Revision 8c2d61c7 (cdmlib): cdmlib part of #3576 (Adapt CdmServer and Dataportal to new naming of CategoricalData.stateData)
- 01:02 PM Revision 04e4f7c3 (cdmlib): lowering log level
- 01:02 PM Revision 73ee5c85 (cdmlib): renaming protected setter to setStateData, see #2923 (Rename CategoricalData.states collection to stateData)
- 12:08 PM Revision f16f10f5 (cdmlib): deactivated controller due to urgent release and unfinished business with a serious memory leak
- 11:15 AM Revision e22f1707 (cdm-dataportal): relaxing test to avoid frequent failures du to #4166 (Map legend causes inconsistent spacing below map)
- 10:05 AM feature request #3444: Don't show empty General Tab
- default tab is synonymy for all portals
03/26/2014
- 05:43 PM Revision 22eb20d7 (cdm-dataportal): fixing #4163 (Taxon Tree - Included Classifications settings can mess up taxon tree settings in user session)
- 05:25 PM Revision d7588d36 (cdm-dataportal): correctly hiding the classification selector if only one classification is available
- 03:37 PM Revision 5303e44d (taxeditor): - moved move-logic to occurrence service layer
- 03:36 PM Revision 6b04561c (cdmlib): - added moveSequence() and moveDerivate() to occurrence service
- 01:35 PM Revision 27cc4c06 (taxeditor): - reset input fields of DerivateSearchView when context stops
- 10:14 AM Revision c20264bf (cdmlib): - replaced BasicHttpParams with the default params of DefaultHttpClient (SyncBasicHttpParams) which are already initialised with default values
- 09:40 AM Revision ef9c1361 (cdmlib): solving TODO: using AbstractPagerImpl.hasResultsInRange() in dao method
- 09:40 AM Revision c9b17396 (cdmlib): missing @Override
- 09:40 AM Revision ab431a5a (cdmlib): contoller methods with return type List should always return a list, even if it is empty
- 08:39 AM Revision 55c3c2c0 (taxeditor): - added drag'n'drop support for Sequences
- - added context listener to DerivateSearchView
- refactored MVC pattern of DerivateSearchView
03/25/2014
- 11:44 PM Revision 709cb854 (cdmlib): removing the deprecated method TaxonPortalController.doGetNameTypeDesignations() for #2280 (Stop using portal/taxon//bin/zsh/nameTypeDesignations)
- 11:41 PM Revision 2b7cd6c2 (cdm-dataportal): solving #2280 (Stop using portal/taxon//bin/zsh/nameTypeDesignations)
- 05:08 PM Revision 53e5ba00 (taxeditor): - added support for SingleRead drag'n'drop
- 05:01 PM Revision 70d6b08b (cdmlib): - added removeSingleRead() method to Amplification
- 04:31 PM Revision f70a6bb7 (cdmlib): fixing #4151 (AdvancedBeanInitializer causes problems when initializing taxonnode hierarchies)
- 02:30 PM Revision d312fb84 (taxeditor): - implemented drag'n'drop support for SpecimenOrObservationBase in Derivate View
- 09:35 AM Revision 35e7b311 (taxeditor): - minor
03/24/2014
- 04:10 PM Revision e09548fb (taxeditor): - minor enhancement
- 03:49 PM Revision 96abdcac (taxeditor): first branch for matus kempa
- 03:48 PM Revision 92fe4d77 (cdmlib): first branch for matus kempa
- 02:52 PM feature request #4155 (Closed): Implement handler (IHandler) to trigger recursive setting of the publish bit on a taxon subtree
- see http://wiki.eclipse.org/Platform_Command_Framework#Executing_a_command_with_parameters
1. the handler will b... - 02:24 PM Revision 0f8371fb (taxeditor): - added timeout to internet availability check
- 02:23 PM Revision 6d417ae0 (taxeditor): - fixed ClassCastException for FeatureNodeContainers
- 02:22 PM Revision 07178eab (cdmlib): - added timeout parameter to isServiceAvailable() method
- 11:39 AM Revision f4705e6f (taxeditor): - added basic drag'n'drop support to DerivateView
- 11:13 AM Revision 4629e304 (cdm-dataportal): adapting test to minor modification in page rendering (supressing map legend div and img if no legend is requested)
03/21/2014
- 09:19 PM Revision 78e4f4f8 (cdmlib): avoiding recurive calls, replaced by while loop
- 05:55 PM Revision 6ed36ca8 (cdmlib): avoiding NPE
- 04:24 PM Revision 1717116c (cdm-dataportal): minor bug fix
- 04:13 PM Revision af932304 (cdm-dataportal): avoiding "Notice: Undefined property:"
- 12:41 PM bug #2957: running maven site:site for Taxonomic Editor fails
- 1. is fixed by just adding an 'mvn install' - doesn't cost much.
2. is more tricky. I can't get much information on ... - 12:10 PM bug #2957: running maven site:site for Taxonomic Editor fails
- So we are having two problems here:
1. jars are missing when `mvn install` was not run - a minor one
1. Problems d...
03/20/2014
- 05:54 PM Revision 26fb3778 (cdm-dataportal): implementing #3993 (Allow to exclude classifications from the classification browser)
- 05:54 PM Revision 2d683865 (cdm-dataportal): .gitignore
- 05:29 PM bug #2957: running maven site:site for Taxonomic Editor fails
- The dependency problem is due to missing jars in the local repository. Running 'mvn install' before the site goals fi...
- 04:43 PM Revision 6d529a5b (cdmlib): bug fix: list and page REST services must return List or page objects, not ModelAndView
- 04:20 PM Revision 871f7f61 (taxeditor): added more tests for both lazy loading entities and collections
- 04:06 PM Revision 63ce1315 (taxeditor): adding missing methods
- 03:29 PM Revision c15d14cd (cdmlib): checklist webservice optimized
- *integrated a ModelAndView for file downloads
*integerated a ProgressMonitor for csv export
*export is threaded
*exte... - 02:56 PM Revision 7fd3dd3f (cdmlib): adating test to modified number of taxa
- 02:30 PM Revision 33fee414 (cdm-dataportal): adapting webservice uris after refactoring taxon controllers for #2595 (portal/taxon/{uuid}/accepted/{uuid} producing too big data objects)
- 02:29 PM Revision 018d16b7 (cdmlib): refactoring taxon controllers and thus solving #2595 (portal/taxon/{uuid}/accepted/{uuid} producing too big data objects)
- 01:51 PM Revision 41eb24f1 (taxeditor): #4114 sort order in taxon navigator
- 01:50 PM Revision 3b98b0db (cdmlib): #4114 sort order in taxon navigator and adding that autonyms could be whether infraspecific or infrageneric (Art. 22.3 and 26.3)
- 01:31 PM Revision 0440906b (cdmlib): fixing #4112 (portal/taxon/{uuid}/accepted/{uuid} takes exceedingly much time in specific cases) and #2595 (portal/taxon/{uuid}/accepted/{uuid} producing too big data objects) this also solves the according issue mentioned in #3336 (Improve overall dataportal page loading performance)
- 01:31 PM Revision b92052e6 (cdmlib): implementing dao method listAcceptedTaxaFor, for #4112
- 12:12 PM Revision 6c8c81b2 (cdmlib): added containsValue method to retrieve value object for maps
- 11:42 AM Revision 4e2eeb17 (cdmlib): remove link to the apt file for the documentation. ie, there is no external documentation yet
- 11:26 AM Revision e9f32da7 (cdmlib): add occurrence controler for the occurrence web-service
- 11:22 AM Revision 7ad4b0f9 (cdmlib): add new method for getting specimen and observation
- 11:20 AM Revision 36d85dcd (cdmlib): add new webservice for exporting occurrences for a specific taxon uuid
- definition in xml files (web-inf)
- 11:19 AM Revision 6e7b2ab3 (cdmlib): add new webservice for exporting occurrences for a specific taxon uuid
03/19/2014
- 04:56 PM task #4150 (New): compile edit map service documentation of new features in version v1.4_dev and v1.5_dev
- compile documentation of new features in version v1.4_dev and v1.5_dev
the below excepts from a discussion relat... - 04:31 PM Revision 7bd38c47 (cdmlib): fixing #4148 (problems with simple search)
- 04:03 PM bug #2957: running maven site:site for Taxonomic Editor fails
- Created a new job http://int.e-taxonomy.eu/jenkins/view/EDIT%20Taxonomic%20Editor/job/taxeditor-SITE-DEPLOY/ for site...
- 02:07 PM bug #2957: running maven site:site for Taxonomic Editor fails
- We should fix the repository configuration in the pom
for repository.springsource.com, see http://ebr.springsource... - 01:43 PM bug #2957 (In Progress): running maven site:site for Taxonomic Editor fails
- The main problem with the site goal is the fact that the 'project-info-reports:dependencies' plugin : http://maven.ap...
- 03:53 PM Revision 6f3fe1f5 (taxeditor): - fixed class cast exception resulting from TreeNodes of DerivateView
- 03:45 PM Revision 89ccc773 (taxeditor): - added context menu for TissueSample in DerivateView
- 11:40 AM Revision 83dfc434 (cdmlib): updating site doc by adding maven memory requirements and mentioning the requirement for maven 3
03/18/2014
- 09:37 PM Revision 10f6aa4b (cdm-dataportal): fixing #4142 (openlayers icon links broken when enabling perfomance option 'Aggregate JavaScript files') and adding nicer control icon theme
- 02:15 PM Revision 4fd0313c (taxeditor): while fixing a bug, revert the setting of the comparator.
- 11:38 AM Revision e3f54c1e (cdm-dataportal): hiding legend div if no legend is available
03/17/2014
- 11:03 PM Revision 216de3d0 (cdmlib): cdmlib part of fix #4121 (Changing password does not work)
- 11:03 PM Revision 98ca468b (cdmlib): additional method required to avoid problems which where due to a fix for ticket #3822 (see related commit for taxeditor)
- 11:03 PM Revision 6410237a (taxeditor): taxeditor part of fix for #4121 (Changing password does not work)
- 11:03 PM Revision b62fb410 (taxeditor): avoiding problems which where due to a fix for ticket #3822
- 01:50 PM Revision d9c55cdf (taxeditor): with the fixed compareTo method the TaxonNodeComparator should work (#4114)
- 01:30 PM Revision 0f24bfe5 (cdmlib): fix compareTo for IdentifiableEntity
- 10:02 AM Revision aa2f3cbf (taxeditor): - added isEnabled() method to IEnableableFormElement
- 09:58 AM Revision 2956883b (cdmlib): - renamed method
- 09:58 AM Revision 66533eb1 (taxeditor): - added missing interface method
- 09:43 AM Revision 23e15ade (taxeditor): - removed StoreUtil.getCdmEntity() invocation (#4091)
- 09:36 AM Revision f295355d (cdmlib): - added reference to trac ticket
- 08:54 AM Revision bfd0fa66 (taxeditor): - fixed context menu options
- 08:53 AM Revision c09b4938 (cdmlib): - made default constructor protected due to a hibernate problem (see https://stackoverflow.com/questions/7273125/hibernate-envers-and-javassist-enhancement-failed-exception)
- 08:52 AM Revision 43e4bbeb (cdmlib): - fixed a bug in the automated setting of the string length
- 08:51 AM Revision 1cb96484 (taxeditor): - implemented EntitySelectionElement for Primer
- - adapted details views with primer selection element
- 08:51 AM Revision 7a72947b (cdmlib): - added javadoc
- 08:50 AM Revision dcb9e6ec (taxeditor): - added missing interface method
- 08:50 AM Revision dfab8a93 (cdmlib): - added test for baseUnit() method
- 08:44 AM Revision 594277ce (cdmlib): - added IPrimerService and IPrimerDao with the corresponding implementations
- - interface supports the retrieval of UuidAndTitleCache lists for all primers in the DB
- 08:19 AM Revision 81d4cb59 (cdmlib): Removed Java 1.7 specific function due to backwards compatability
03/15/2014
- 10:21 AM Revision e6814896 (cdmlib): fix missing idInVocabulary for countries; implement country mapping for EditGeoService (#3452, #3651)
- 02:36 AM Revision 4bdeb27e (cdmlib): fix missing idInVocabulary for countries; implement country mapping for EditGeoService (#3452, #3651)
03/14/2014
- 09:59 PM Revision 54e6ea3d (cdmlib-apps): refactor GlobisActivator
- 09:58 PM Revision 16ead944 (cdmlib-apps): add EDITImport to destinations and cacheUpdater
- 09:57 PM Revision 39afc707 (cdmlib-apps): latest changes to specTax import
- 09:56 PM Revision 3cc1b2a3 (cdmlib-apps): add NomStatus vocabulary for ICZN #4085
- 09:54 PM Revision 889a02c6 (cdmlib): minor
- 09:52 PM Revision 64fddb1b (cdmlib): add NomStatus vocabulary for ICZN #4085
- 09:46 PM Revision c4a8a286 (cdmlib): latest changes to Specimen Excel Import
- 09:42 PM Revision 3309c9e5 (cdmlib-apps): latest changes to FdAC import and new source
- 08:46 PM Revision 9f86020d (cdmlib): Added IsoParaType to SpecimenTypeDesignationStatus
- 08:39 PM Revision 731a13f5 (cdmlib): Added IsoParaType to SpecimenTypeDesignationStatus
- 05:46 PM Revision 951392c7 (cdmlib): fix compilation bug in MarkupTransformer
- 05:01 PM Revision e5ee1d39 (cdmlib): improve findBestMatchingArea
- 05:00 PM Revision e0abb3ed (cdmlib): some language uuids
- 04:59 PM Revision 97fd2368 (cdmlib): handle sous-genre
- 04:59 PM Revision 629dcc55 (cdmlib): Handle structured common names
- 04:58 PM Revision 9f513cb5 (cdmlib): remove imports
- 04:57 PM Revision 94ed9859 (cdmlib): minor
- 04:55 PM Revision 1b4e13ef (cdmlib-apps): latest sources for FdG
- 03:03 PM Revision d3d4afa4 (cdmlib): adding missing @Override
- 02:52 PM Revision 87bae5e8 (taxeditor): implementing #4120: User always needs to have the right to change password and hiding all user related menu contributions if no user is logged in
- 02:52 PM Revision 1a0c1a9c (taxeditor): Revert "#4114 sort order in taxon navigator " to avoid blocking bug
- This reverts commit 1ef7ab55c5d437aba039bc10ee8d81e12f402309.
- 01:04 PM Revision 94b88078 (cdmlib): enhancing feature for checklist WS:
- *added caching for CSV download
--> a export will be triggered only once and after 24h to renew the cached file
*add... - 12:40 PM feature request #4137: Discuss "Material Sample" as new SpecimenOrObservationType
- Ja, alle Samples sensu lato sind damit abgedeckt, also auch MixedSample, EnvironmentalSample, Tissue, DNA, RNA, Prote...
- 12:25 PM feature request #4137 (In Progress): Discuss "Material Sample" as new SpecimenOrObservationType
- ABCD 2.06f now has MaterialSample:
"MaterialSample" is added as "A resource describing the physical results of a... - 12:14 PM feature request #3685: Open tissue sample and molecular issues
- Liebe Campanula-Kollegen,
einige Monate sind vergangen, seit wir uns durch die DNA-Elemente und die Modellierung... - 11:04 AM bug #4136 (Closed): authorship part of names not being refreshed in taxon navigator
- [[reported|by eckhard]]
Aktualisierung des Taxonomic Tree:
bei Eingabe eines neuen Taxons erscheint der Na... - 10:53 AM bug #4134 (Closed): Transmissionengine Distribution seems to miss distributions for higher Taxa
- reported by Norbert:
wie kommt es eigentlich, dass für das Taxon "Cichorieae" die Transmission Engine Distributi... - 10:31 AM feature request #4133 (Duplicate): publish flag inheritance for new taxa [DISCUSS]
- Wir müssen auch darüber nachdenken, wie sich das publish flag z.B. innerhalb einer Familie nach unten fortpflanzt: ha...
03/13/2014
- 10:24 PM Revision cd0864d0 (taxeditor): adding missing manifest file
- 09:23 PM Revision ddf2f529 (taxeditor): setting application configuration and boolean remoting flag (bean) in hibernate proxy classes to differentiate local and remoting
- 06:05 PM Revision 37e7c06b (cdmlib): adapting tests for #4081 (TaxonNodeServiceImpl.makeTaxonNodeASynonymOfAnotherTaxonNode() requires TAXONNAMEBASE.[UPDATE])
- 05:08 PM Revision 58606c34 (cdmlib): removing excludes from map according to #4111 (behaviour of TaxonEditor for users with limited grants [DISCUSS]) comment 8
- 05:04 PM Revision 2e44ba1f (cdmlib): adapting default permission goups according to #4111 (behaviour of TaxonEditor for users with limited grants [DISCUSS]) comment 8
- 04:54 PM feature request #4129: Allow filtering by OriginalSourceType
- Eckhard:
2.) Angabe der Referenzen für factual data – distribution:
beim Import sind ja (ich glaube jeweils zwe... - 04:53 PM feature request #4129 (New): Allow filtering by OriginalSourceType
- Ordinary users usually do not want to be disturbed by Data Linneage information. Therefore it should be possible to f...
- 04:51 PM Revision 14fde9f4 (taxeditor): after review final modification for #4115 ('editor' users cannot create new references via the reference select list)
- 04:09 PM Revision 118295d6 (taxeditor): implementing #4123 (add idInVocabulary to term labels in editor)
- 04:09 PM Revision e05cba4e (taxeditor): removing unavailable extension eu.etaxonomy.cdm.remote.controller.csv
- 04:00 PM Revision de168514 (taxeditor): added remote collection method checks in addition to local for lists and sets
- 03:59 PM Revision 9cb51dcb (cdmlib): added remote collection methods to service layer to be able to make remote calls on server side persisted collections
- 02:38 PM Revision 2f0adec7 (cdmlib): removing homptypicalGroups from excludes
- 02:24 PM Revision a3de3443 (taxeditor): #4114 sort order in taxon navigator
- 01:39 PM Revision fcbc1c42 (taxeditor): catching PermissionDeniedExceptions when only doing a check, so these exceptions no longer pollute the log
- 01:39 PM Revision aec33202 (taxeditor): avoiding NPE
- 01:22 PM Revision b1073d98 (cdmlib): implementing test and fixing bugs 2 regarding #4081 (TaxonNodeServiceImpl.makeTaxonNodeASynonymOfAnotherTaxonNode() requires TAXONNAMEBASE.[UPDATE])
- 01:22 PM Revision 3d03a83f (cdmlib): implementing test and fixing bugs regarding #4081 (TaxonNodeServiceImpl.makeTaxonNodeASynonymOfAnotherTaxonNode() requires TAXONNAMEBASE.[UPDATE])
- 01:17 PM feature request #4118: @NotPartOf Annotation to exclude properties from the permission validation
- see also #4081
- 01:15 PM Revision a80ab4d7 (cdmlib): changed isTopmostNode to check for null parent node taxon
- 10:00 AM Revision a3044475 (taxeditor): added test class for persistent collections and also a base class for configuringsetting up remote configuration.
03/12/2014
- 03:24 PM Revision 68153e8d (taxeditor): added call to remoting with correct check
- 02:39 PM bug #2957: running maven site:site for Taxonomic Editor fails
- this is broken since about 2 Years!
Is there a volunteer who wants to care for this?
Andreas
- 02:18 PM Revision d261aa32 (cdmlib): implementing exclude map for #4081 (TaxonNodeServiceImpl.makeTaxonNodeASynonymOfAnotherTaxonNode() requires TAXONNAMEBASE.[UPDATE])
- 01:04 PM feature request #4118 (Feedback): @NotPartOf Annotation to exclude properties from the permission validation
- successor ticket to #4081 (TaxonNodeServiceImpl.makeTaxonNodeASynonymOfAnotherTaxonNode() requires TAXONNAMEBASE.[UPD...
- 12:54 PM Revision 6cf0494e (cdm-dataportal): updating tests to use the domainname instead of the IP-adress
03/11/2014
- 06:47 PM Revision fdedfe16 (taxeditor): fixing #4115 ('editor' users cannot create new references via the reference select list)
- 06:10 PM Revision ae124a8e (taxeditor): fixing #4116 (ClassCastException when selecting Euro+Med top level area in DistributionElement details view)
- 05:38 PM Revision d21fe505 (taxeditor): fixing problem of publish checkbox disabled state being overwritten
- 04:32 PM Revision 20fed6a1 (cdmlib): redlist WS export added .json and .xml functionality
- 08:38 AM Revision 1b52b9e4 (taxeditor): - refactored selection of DerivateView to be TreeNode
- - adapted selection handling
- restructured derivate hierarchy
- Amplifications are now a direct child of Sequence... - 08:34 AM Revision 9b38435e (taxeditor): - fixed refresh problem
03/10/2014
- 04:24 PM Revision 08d959c4 (cdmlib): improve common name import for markup
- 04:09 PM Revision 1ea539e4 (cdmlib): getLangaugeByKey for markup transformer
- 04:01 PM Revision 7988ab2f (taxeditor): - clean code
- 03:59 PM Revision 7cc62e3f (cdmlib): - fixed typo
- 03:39 PM Revision 08cc4580 (cdmlib): rearrange constants
- 01:58 PM Revision 3a7d21b2 (cdmlib): handle missing name parts for null parent
- 01:55 PM Revision 7c310acc (cdmlib): improve mods import
- 12:43 PM Revision a3d76424 (taxeditor): fixing: #4110 (imlement nicer warning dialogue in Taxon Editor for permission denied exception)
- 11:31 AM task #4107: Deleting taxa and stable IDs [DISCUSS]
- we definitely should use hibernate envers for this since it is anyway in place, as far as my memory goes I think that...
- 10:26 AM task #4107: Deleting taxa and stable IDs [DISCUSS]
- > Warum hältst du das Löschen von Taxa für problematisch?
Das ist ein weiteres Problem. Für E+M und später sicherl... - 10:25 AM task #4107 (New): Deleting taxa and stable IDs [DISCUSS]
- deleting taxa is problematic since we are using stable identifiers for taxa. After "deleting" a taxon it must still b...
03/08/2014
- 02:48 AM Revision 75f9bd69 (cdmlib): minor
- 02:47 AM Revision f96d9acd (cdmlib): minor
03/07/2014
- 08:55 PM Revision c14fc0ed (cdmlib): Add database index on treeIndex #4105
- 06:33 PM Revision e28e4b81 (cdmlib): minor
- 06:30 PM Revision 666b484a (cdmlib): improve TaxonCacheStrategy. Use short form where possible
- 06:30 PM Revision 36ce30be (cdmlib): fix CacheUpdater
- 05:36 PM Revision 0df84d71 (cdmlib): making TaxonNodeByNameComparator truely null save - #2912 (NPE in TaxonNodeByNameComparator when Taxon in TaxoNode is null)
- 04:00 PM feature request #4101: Default value for publish bit of new taxa must be configurable via DB preferences
- I think we first need to discuss what the best behaviour is. This is also related to the Versionining or Non-Versioni...
- 03:44 PM feature request #4101 (Closed): Default value for publish bit of new taxa must be configurable via DB preferences
- in the Euro+Med project it is important that the publish bit is not set by default for new taxa. In other use cases s...
- 03:57 PM feature request #4011 (Feedback): disallow changing publish flag for users with unsuffcient rights
- a regression occurred, reported by eckhard:
_als Cichorieae-Editor habe ich ein neues Taxon eingegeben. Das Publish... - 02:33 PM Revision 9e0cf9c0 (cdm-server): - adding profile for local maven repo
- - fixing java .net repository
- adding missing version numbers
- .. - 02:31 PM Revision 5624baa1 (cdmlib): minor
- 02:00 PM Revision 73baf7a4 (cdmlib): Cleaning up a bit
- 01:42 PM Revision 7492ea45 (cdmlib): solving some reference cache strategy issues, e.g. #3645
- 01:03 PM Revision e0d2c312 (cdmlib): adding isBlank to StrategyBase
- 12:35 PM Revision 47af76e8 (cdmlib): minor
- 12:32 PM Revision 04cfb800 (cdmlib): Better handling for short citation of references
03/06/2014
- 06:09 PM Revision 97683dd7 (taxeditor): more details in exception message of StoreUtil.getCdmEntity()
- 05:59 PM Revision 75c443dd (taxeditor): dnd support in taxon navigator for Taxonnodes protected regarding user permissions - #4055 (action enablement adapts to the users granted authorities)
- 12:57 PM Revision e83433aa (cdm-server)
- 01:48 AM Revision 49490a3b (cdmlib): minor
- 01:46 AM Revision 7a3f759c (cdmlib): minor and generics
03/05/2014
- 06:18 PM Revision 839cb4cd (taxeditor): avoiding NPE and other exceptions
- 06:18 PM Revision d9d04b04 (taxeditor): updating project url in pom.xml
- 06:18 PM Revision b92f1605 (taxeditor): no longer using a conversation for the login dialog and thus fixing problems after putting wrong credentials
- 06:15 PM Revision 1c29bd52 (taxeditor): fixing setEnabled method
- 05:44 PM Revision 09c8f311 (cdmlib): fixing broken dependencies by excluding spring-expression
- 03:33 PM Revision 1f013eea (taxeditor): - removed dummy data from SpecimenImport
- 03:28 PM Revision e84380bd (cdmlib): - added cascading save to SequenceString of a Sequence
- 03:28 PM Revision 7d892339 (taxeditor): - fixed event handling by creating and linking the missing elements
- 01:24 PM Revision 8475fe50 (taxeditor): - added missing DNA Quality section
- 01:18 PM Revision 664a3be9 (taxeditor): - adpated DNA DetailsViews according to current development
- 01:16 PM Revision 1cf32439 (taxeditor): - renamed getBaseUnit() to baseUnit()
- 01:16 PM Revision d149f596 (cdmlib): - renamed getBaseUnit() to baseUnit()
- 01:16 PM Revision 99fa2e6e (taxeditor): - added transparency to icons
- 12:48 PM Revision 1f3a4888 (cdm-server): fixing problems in pom.xml, now ready for maven3
- 11:48 AM Revision 4a1907c8 (cdmlib): setting correct port number for remote integration tests
- 08:43 AM Revision 09a1be0a (taxeditor): - added util method to get for getting a CDM entity (used in authenication/permission framework)
- - made use of this method where the type of the parameter was too general (like object)
- made getBaseUnit() of Deri... - 08:43 AM Revision 70c363c7 (cdmlib): - added util method to get for getting a CDM entity (used in authenication/permission framework)
- - made use of this method where the type of the parameter was too general (like object)
- made getBaseUnit() of Deri...
03/04/2014
- 07:10 PM Revision 4f9dab69 (cdmlib): minor
- 07:09 PM Revision 73473a77 (cdmlib): minor
- 05:18 PM Revision 265af043 (taxeditor): - added icons for Amplification, Sequence and SingleRead
- 05:17 PM Revision cd145c6b (cdmlib): - refactored to use "base" unit wherever possible (base unit is derivedUnit or fieldUnit)
- 04:30 PM Revision bc22752c (cdmlib): changing ports in config to avoid conflics
- 03:45 PM Revision 96cb908c (cdmlib): automatically testing of cdmlib-remote-webapp during the maven lifecycle - #4094: automatically test cdmlib-remote-webapp
- 09:25 AM Revision 39b24584 (taxeditor): - added code to show icon for Amplification, Sequence and SingleRead (image files still missing)
- - removed text fields for media file in dna DetailsViews
- added contig file in Sequence DetailsView - 09:20 AM Revision ec766423 (cdmlib): - added cascading save for contig file of Sequence
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