Activity
From 02/25/2012 to 03/25/2012
03/21/2012
- 04:38 PM Revision a57a4e2e (cdm-dataportal): switching to new Metacarta Vmap0 + fixing some minor bugs
- 07:17 AM Revision f9f3288b (cdmlib-apps): minor
- 07:13 AM Revision c3be32ca (cdmlib): Latest developments for DwcA-Import
03/20/2012
- 01:57 PM Revision 045a007b (cdmlib): xsl stylesheets for rest service api endpoints
- 01:35 PM Revision 23238693 (cdmlib)
- 10:37 AM Revision c25a1f29 (cdmlib)
- 09:42 AM Revision 97152533 (cdmlib): moving webapplication configuration into cdmlib-remote
- 07:39 AM Revision 775d037d (taxeditor): AT: Committing code review changes
03/19/2012
- 06:46 PM Revision 899652f4 (cdmlib): minor
- 06:45 PM Revision 26658899 (cdmlib): latest developments in DwcA import
- 05:49 PM Revision 383a8f6b (cdmlib): added findById(Set) to IService
- 04:47 PM Revision 717551c8 (cdmlib-apps): deleting it
- 04:41 PM Revision 2e5a2e49 (cdmlib-apps): new branch for vibrant search web interface
- 01:56 PM Revision 6098bed4 (cdmlib): include taxRel 40 to BM import
- 01:54 PM Revision 91f381e0 (cdmlib): some logging improvements
- 01:52 PM Revision dca26727 (cdmlib): remove imports
- 01:51 PM Revision 217ba9b1 (cdmlib-apps): update for ViBRant activators
- 01:49 PM Revision eef5fb06 (cdmlib-apps): bugfix for E+M classification import
03/17/2012
- 01:06 AM Revision 7b908f12 (cdmlib): not congruent to and treated as later homonym for BM import
- 12:39 AM Revision 0862fead (cdmlib): bugfix for missing sequence column
03/16/2012
- 05:40 PM Revision e79f4fb2 (cdmlib): bugfix for nomRef date and failing cache strategy tests
- 03:56 PM Revision b377f416 (cdmlib-apps): clean up PESI activators
- 03:52 PM Revision 1aebda23 (cdmlib-apps): update vibrant activators
- 03:51 PM Revision 31bcdc2f (cdmlib): bugfix in BerlinModel TaxRel import, use classificationQuery if NOT null
- 03:50 PM Revision 99b7bf54 (cdmlib): moved otherArea handling to Base class
- 03:49 PM Revision abff0d8c (cdmlib): logging and bugfix for BM common name import
- 03:48 PM Revision 533dcdf0 (cdmlib): bugifx for TaxonName import validation
- 03:47 PM Revision 231b3b98 (cdmlib): getDatePublishedString for Reference
- 03:47 PM Revision f3e15e40 (cdmlib): update for reference cache strategies, not yet ready, see also http://dev.e-taxonomy.eu/trac/ticket/2862
- 02:32 PM Revision b84367ba (cdmlib-apps): move iopi and mcl to vibrant folder
- 02:10 PM Revision 075e9884 (cdmlib): warn->info for ignore
- 02:08 PM Revision 818b8a04 (cdmlib-apps): new sources
- 02:00 PM Revision 8009cceb (cdmlib-apps): add MCL and IOPI activator
- 01:38 PM Revision 1e035c0d (cdmlib): warn->info for check is missing
- 09:31 AM Revision e3c70206 (cdmlib-apps): latest fixes for IF
03/15/2012
- 03:54 PM Revision ee0aa79f (cdmlib): bugfix titleCache for generic references with inReference
- 03:50 PM Revision e6a3d605 (cdmlib-apps): bugfixes for IF
- 02:05 PM Revision 14c11f44 (cdmlib): implement nomenclaturalTitle for generic references (titleCache still missing)
- 10:30 AM Revision 6fb88df3 (cdmlib)
03/14/2012
- 07:29 PM Revision fad642ed (cdmlib): AT: committing merge changes
- 07:20 PM Revision e6a01da7 (taxeditor): AT: committing latest changes to the Tax Editor after a first round of Code review
- 05:47 PM Revision 43b314ef (cdmlib): new getters for extensions
- 05:46 PM Revision f17d640b (cdmlib-apps): bugfix fossilStatus for PESI export
- 05:45 PM Revision 2dcd5b3b (cdmlib-apps): minor
- 04:48 PM Revision f014a1b0 (cdmlib-apps): no last action for distributions and bugfix for missing authors
- 04:09 PM Revision b015905a (cdmlib-apps): bugfixes for index fungorum
- 04:08 PM Revision cf13b0cd (cdmlib-apps): index fungorum destintation
- 03:22 PM Revision 324d38f7 (taxeditor): AT: committing latest changes to the Tax Editor after a first round of Code review
- 03:17 PM Revision bf4a5abb (taxeditor): Recreating dev branch
- 02:56 PM Revision 190f2626 (taxeditor): Merged changes from dev branch
- 02:44 PM Revision d3c8babf (taxeditor): Merger
- 02:41 PM Revision 1d21c080 (taxeditor): Changes merged
- 02:30 PM Revision 9989af45 (taxeditor): Merge
- 02:03 PM Revision 8e73dbfd (cdmlib): Bugfix for reference import
- 01:57 PM Revision a748de7b (taxeditor): removing unused configuration from pom.xml
- 01:47 PM Revision d5974122 (taxeditor): Fixing mixed up build files
- 01:39 PM Revision e65291e1 (taxeditor): added missing p2.inf file
- 01:20 PM Revision 95cc223b (taxeditor): Merging changes from dev branch
- 01:09 PM Revision 370c8b07 (cdmlib): bugfixes on BM common name import, change query, handle misapplications, logging
- 12:58 PM Revision 0385aa38 (cdmlib)
- 12:15 PM Revision 0c47f252 (cdmlib)
- 11:21 AM Revision e1bb528d (taxeditor): Merging latest changes from dev branch
- 11:19 AM Revision c318ec3f (cdmlib)
- 10:49 AM Revision 2bbcb3a7 (cdmlib)
- 10:48 AM Revision 8b1d7ce8 (cdmlib)
- 10:46 AM Revision 01198d4f (cdmlib)
- 10:46 AM Revision 553900d8 (cdmlib)
- 10:46 AM Revision e5ac779a (cdmlib)
- 10:36 AM task #2859 (New): TaxonNameBase.getReferenceYear does not return inRef year
- If nomRef doesn't have a date attached but inReference does we may think about returning the inReference year. Howeve...
- 10:31 AM Revision 40f144d3 (cdmlib): bugfix for #2858
- 12:41 AM Revision 0773699c (cdmlib-apps): bugfix for areas with missing representation
- 12:40 AM Revision 6276d078 (cdmlib): minor
- 12:40 AM Revision 12123d4f (cdmlib): minor
- 12:38 AM Revision a259dc54 (cdmlib): bugfix for spanish i in common names import
03/13/2012
- 06:49 PM Revision 12687675 (cdmlib): Updates to Berlin MOdel import (mainly common names)
- 05:33 PM Revision 6386a0f0 (cdmlib): minor logging improvement
- 04:37 PM Revision 17f48e57 (cdmlib): Hopefully fixes #2732 and some logging issues
- 04:12 PM feature request #2854: Implement part of other title for part of articles and part of booksections
- Replying to [[comment1|a.mueller]]:
> fix TODO in BerlinModelReferenceImport line ~720 after fixing !!
now it is a... - 03:54 PM feature request #2854: Implement part of other title for part of articles and part of booksections
- fix TODO in BerlinModelReferenceImport line ~720 after fixing !!
- 03:52 PM feature request #2854 (Closed): Implement part of other title for part of articles and part of booksections
- duplicate for #2853 to have it in both milestones
- 12:17 PM bug #2851: Check ordering in API paged methods
- Stimmt, da haste Recht! Ich hatte lediglich an den recht einfachen Fall select * from <TableName> gedacht.
Eine Lösu... - 12:16 PM bug #2851 (Discussed): Check ordering in API paged methods
- Paging API method call results may cause problems if the result is not ordered. We need to check our methods and fix ...
- 10:55 AM Revision 5cc81603 (cdmlib): AT: committing latest changes to the remote project
- 10:00 AM bug #2850 (New): Error message on empty distribution
- If an empty distribution is added to a taxon the portal shows the following error message:
~~~
warning: Invalid...
03/12/2012
- 06:50 PM Revision db8e4ae8 (cdmlib): use correct transactions source references
- 06:49 PM Revision 5f653ad8 (cdmlib-apps): latest development for PESI descriptions
- 06:48 PM Revision 055909db (cdmlib-apps): exclude relationships to Misapplied names
- 05:17 PM Revision 12ec48f6 (cdmlib): Fixes a problem with the new ID generator, that prevented the creation of new CDM objects
- 03:44 PM Revision bfe6b0b2 (taxeditor): AT: commiting latest changes to the Palm Use data extension
- 12:47 PM Revision 7de32db9 (cdmlib)
- 12:46 PM Revision d6173b9d (cdmlib)
- 12:38 PM Revision 3b2652b2 (cdmlib)
- 12:32 PM Revision 9663c7fe (cdm-dataportal): TESTING ASSOC ACCEPTED NAME RELATIONSHIP in view
- 12:30 PM Revision 479d3001 (cdmlib)
- 12:28 PM Revision 23874641 (cdmlib)
03/11/2012
03/10/2012
- 01:21 AM Revision 1b078861 (cdmlib): latest changes to Dwca Import
- 01:20 AM Revision ba37ba74 (cdmlib-apps): add cich source
03/09/2012
- 11:53 PM Revision acdc7437 (cdmlib-apps): dwca activator updates
- 10:08 PM Revision 4e4cab25 (cdmlib): fix failing Dwca test
- 03:41 PM Revision 53f57f72 (cdmlib): bugfix for Dwca missing synonyms
- 03:34 PM Revision cfc369e6 (cdmlib): bugfix for failing test in Dwca Import
- 03:00 PM Revision 0b0f9d05 (cdmlib): update Dwca Test data
- 02:55 PM Revision 09d4f77e (cdmlib): new method in CdmUtils
- 02:54 PM Revision 76fd4a60 (cdmlib): update Dwca Import tests
- 02:53 PM Revision 0d259fd9 (cdmlib): update Dwca Import
- 02:52 PM Revision 57a268c7 (cdmlib): minor
- 02:51 PM Revision a4fb9b80 (cdmlib): implemented findId in IService
- 02:50 PM Revision b810f39f (cdmlib): update Dwca Test data
- 10:29 AM Revision 8970bfdf (cdmlib): minor change in p6spy.properties - using default log file
- 09:27 AM Revision bec3050d (cdmlib): removing debug log
- 09:24 AM Revision 89dfec92 (cdm-dataportal): Fixing typo in error message
03/08/2012
- 08:00 PM Revision 71920c02 (cdm-dataportal): minor bug fix
- 08:00 PM Revision bfbe1452 (cdm-dataportal): Changed classification view to fit with new meta.xml
- 02:00 PM Revision d7727a60 (cdmlib)
- 01:58 PM Revision fa053ec8 (cdmlib)
- 01:54 PM Revision 77ec624b (cdmlib)
- 01:41 PM Revision 297b76dc (cdmlib)
- 09:20 AM Revision df13735b (cdmlib): AT: Comminting bug fixing for TaxEditor(feature class), fixing the setup and tree viewer. also commiting fixes to the versions in the POM.xml s
- 09:19 AM Revision 0680729b (taxeditor): AT: Comminting bug fixing for TaxEditor, fixing the setup and tree viewer
03/07/2012
- 05:08 PM Revision 8c804e53 (cdmlib): minor
- 03:46 PM Revision f45d5f33 (cdmlib)
- 03:35 PM Revision e5e16fb7 (cdmlib)
- 03:20 PM Revision b4c51b60 (cdmlib)
- 03:18 PM Revision 97de5ff3 (cdmlib)
- 03:01 PM Revision 94bf6f97 (cdmlib)
- 02:58 PM Revision 7e1024cd (cdmlib)
- 02:57 PM Revision 0a2ccca5 (cdmlib)
- 02:52 PM Revision eaf806b8 (cdmlib)
- 02:51 PM Revision 7940f527 (cdmlib)
- 02:51 PM Revision 403a7173 (cdmlib)
- 02:51 PM Revision 2aa1decc (cdmlib)
- 02:51 PM Revision 3c0ef289 (cdmlib)
- 02:50 PM Revision 850ba15d (cdmlib)
- 02:27 PM Revision ccf8f712 (cdmlib)
- 02:21 PM Revision b4b37531 (cdmlib)
- 02:20 PM Revision cdf43acf (cdmlib)
- 02:19 PM Revision 101b2eaf (cdmlib)
- 02:10 PM Revision 901e5962 (cdmlib)
- 02:07 PM Revision 425e09f1 (cdmlib): update for Dwca import test data, include parentID and bugfixes
- 02:06 PM Revision 6208cf33 (cdmlib)
- 02:05 PM Revision 0b629941 (cdmlib)
- 01:58 PM Revision f365f997 (cdmlib)
- 01:58 PM Revision 151f6381 (cdmlib)
- 01:57 PM Revision 59fef843 (cdmlib)
- 01:57 PM Revision 105e49ef (cdmlib)
- 01:57 PM Revision 022a5da4 (cdmlib)
- 01:48 PM Revision 76698d08 (cdmlib)
- 01:45 PM Revision 184a8062 (cdmlib)
- 01:22 PM Revision 44f09278 (cdmlib): fixing problem with standalone DwcaImportTest. Using DefaultTermInitializer. This may cause problems in test suite.
- 01:17 PM Revision ef128cb7 (cdmlib): minor
- 01:09 PM Revision 07928004 (cdmlib-apps): latest updates to ERMS import
- 01:09 PM Revision bb6361a6 (cdmlib): update to some mappers
03/06/2012
- 06:11 PM Revision 86e84ca0 (taxeditor): AT: commiting latest changes to the Palm Use data extension, to enable the TaxEditor to create the necessary objects (use marker and vocabularies)
- 04:34 PM Revision 6e925170 (cdmlib-apps): add ERMS Export activator
- 04:34 PM Revision 05907bae (cdmlib-apps): add erms destination
- 04:33 PM Revision 736b8a57 (cdmlib-apps): minor
- 04:33 PM Revision 5fbecb37 (cdmlib-apps): add new erms validators
- 04:32 PM Revision baf7e722 (cdmlib): implement source reference for partitions
- 03:45 PM Revision 561026cd (cdmlib-apps): add new erms validators
- 01:02 PM Revision 006b3878 (cdmlib-apps): include Superdomain rank
- 01:01 PM Revision 96fa7771 (cdmlib-apps): warn -> info for ERMS validators
- 11:55 AM Revision b630605b (cdmlib): improve getRank
- 11:06 AM Revision 30b24db8 (cdmlib-apps): minor
- 11:06 AM Revision 7a8a6f02 (cdmlib-apps): added 2 E+M areas to transformer
03/05/2012
- 11:50 PM Revision 53d947d3 (cdmlib): add licence info
- 11:38 PM Revision 239f13a5 (cdmlib-apps): better handling for null idInSources and multiple PESI sources
- 11:35 PM Revision 5b39b5ac (cdmlib-apps): add NameDescription handling to PesiExportBase
- 11:34 PM Revision d982b174 (cdmlib-apps): add currentTaxon to state
- 10:10 AM Revision 3b3d85c1 (cdmlib-apps): minor
- 10:09 AM Revision 2350a774 (cdmlib-apps): minor
- 10:09 AM Revision 0cb32fda (cdmlib-apps): include PESI export into E+M import
- 10:08 AM Revision 405f1f2b (cdmlib-apps): debugging for PESI description export
- 10:07 AM Revision 1f5c78b7 (cdmlib-apps): correct handling for canary islands, baleares and azores for BerlinModel import and PESI export
- 10:04 AM Revision 2aeecbb2 (cdmlib): correct handling for canary islands, baleares and azores for BerlinModel import and PESI export
03/02/2012
- 05:58 PM Revision 7a7c0b73 (cdm-dataportal): removed comments
- 05:57 PM Revision f6086da6 (cdm-dataportal): made view name specimen conistent will extension filename specimen in strongarm function. tidied up code.
- 04:11 PM Revision ce4836cb (cdmlib): add o with diaeresis to name parser
- 03:13 PM Revision 91bd636e (cdmlib): Add e with diaresis to epithet parser
- 03:05 PM Revision 8abf5aab (cdmlib-apps): correct handling of NULL identifiers in Index Fungorum
- 02:40 PM Revision b01a57cc (cdmlib-apps): fix Original Source mix ERMS<->IF
- 02:39 PM Revision bbb19f42 (cdmlib): add hasNoLastAction
- 02:35 PM Revision d264dc1e (cdmlib): add hasMarker
- 01:32 PM Revision d39fdaad (cdmlib-apps): add LSIDs to Index Fungorum
- 01:10 PM Revision 734c3289 (cdmlib-apps): missing hybrid relation category cache and fixing zoolog. rel cat. caches #2816
- 10:30 AM Revision 24d12651 (cdmlib-apps): use null for pesi export partition return, bugfix
- 10:21 AM Revision 0de43298 (cdmlib): bugfix for BM common name import
- 01:18 AM Revision a0f248ad (cdmlib): Set hybridFormulas to preliminary #2721
- 01:12 AM Revision bc1b3cde (cdmlib-apps): use null for pesi export partition return
03/01/2012
- 11:22 PM Revision 3ba47b58 (cdmlib-apps): add excluded RelTypes
- 11:19 PM Revision c4289b36 (cdmlib-apps): include total count
- 08:03 PM Revision 05402f08 (cdmlib): bugfix for taxonDao.getAllRelationships
- 03:17 PM Revision fd0d07ae (cdmlib-apps): bugfix for display name for taxa
- 01:26 PM Revision 4acf4be0 (cdmlib-apps): use correct display name for misapplied names
- 01:16 PM Revision c79c864c (cdmlib-apps): fix webshowname()
- 11:55 AM Revision 5264445c (cdm-dataportal): implmented hook_permission to enable permission for the module to be set.
- 11:12 AM Revision f592b512 (taxeditor): AT: commiting latest changes to the Palm Use data extension and merger
- 11:02 AM Revision 55364080 (taxeditor): Decreased log severity for terms with missing title caches
- 10:03 AM Revision 8e6ba97f (cdmlib): fix botanical name cache strategy, due to reference cache strategy changes
- 09:35 AM Revision 297123c1 (cdmlib): fix parser bugs, due to cache strategy changes
- 12:22 AM Revision e31693ac (cdmlib): add comma before edition in cache strategy
02/29/2012
- 11:46 PM Revision 73504147 (cdmlib): bugfix for BM CommonName areas
- 09:47 PM Revision ea6725c7 (cdmlib-apps): minor
- 09:45 PM Revision b44787e3 (cdmlib-apps): minor doc
- 09:41 PM Revision aefa60f4 (cdmlib): remove imports
- 07:00 PM Revision 8e240daf (cdm-dataportal): added filter criteria to Classification to remove data that isn't a taxonomy term
- 06:46 PM Revision 13bf44d8 (cdm-dataportal): removed pager from csv views
- 06:33 PM Revision 243a5d4e (cdm-dataportal): fixed relationship in specimen view
- 06:09 PM Revision 511ff261 (cdm-dataportal): removed header from description.txt
- 05:56 PM Revision 53643c8a (cdm-dataportal): added _view_description method to make the creation of all the different description views more generic
- 05:48 PM Revision 001f43e7 (cdmlib-apps): include Sr in PesiExport
- 05:46 PM Revision e3c517a6 (cdmlib): fix Sr mapping in BM occurrence import
- 05:38 PM Revision a3dad48b (taxeditor): added name parser documentation to help content
- 05:38 PM Revision b41ab54a (cdmlib-apps): minor
- 05:32 PM Revision f637dfc4 (cdmlib-apps): uncomment phase1 in relTaxonExport
- 04:42 PM Revision c8641121 (cdmlib-apps): revert makeParent in Phase01. It doesn't work of course as parents may not be available yet
- 04:41 PM Revision cf4d31be (cdmlib-apps): revert makeParent in Phase01. It doesn't work of course as parents may not be available yet
- 04:10 PM Revision 991ca848 (cdmlib-apps): make parentFk in phase01
- 04:08 PM Revision cfa8fb6d (cdmlib): fix ExtensionMapper for extensionType == null
- 04:03 PM Revision 40d82d25 (cdm-dataportal): fixed relationship to taxon term id in Reference view
- 02:50 PM Revision 930e35a2 (cdmlib-apps): minor
- 02:48 PM Revision b77ddbac (cdmlib): show destination correctly for export
- 01:13 PM Revision 87f7aef4 (cdm-dataportal): changed name of distibution for description data as having the same name as the distibution extension was causing problems.
- 12:52 PM Revision c941534a (cdm-dataportal): fixed closing bracket
- 12:51 PM Revision 1b5f4b20 (cdm-dataportal): linked out_file_url to distribution file
- 12:49 PM Revision bbd3f5bb (cdmlib-apps): latest INdex Fungorum development
- 12:06 PM Revision 8de8732c (cdm-dataportal): tidied up Views
- 11:27 AM Revision 697f192f (cdmlib)
- 11:26 AM Revision 0e5f3241 (cdmlib)
- 11:26 AM Revision ab90979a (cdmlib-apps)
- 11:13 AM Revision d3688dac (taxeditor): fix order for common name inputs #2354
02/28/2012
- 10:40 PM Revision b85d0e2b (cdmlib-apps): IF distributions bugfix and IF export first version
- 09:53 PM Revision e67b7cfa (cdmlib-apps): Index Fungorum distribution import
- 07:17 PM Revision 9d6bec90 (cdmlib-apps): minor
- 07:13 PM Revision f946dc57 (cdmlib): latest developments for Index Fungorum import
- 07:12 PM Revision 1e41fbca (cdmlib-apps): latest developments for Index Fungorum import
- 06:08 PM Revision 8e5c42d1 (cdm-dataportal): tidies up meta.xml and Views. Added views for all the different types.
- 05:13 PM Revision dc1d8c6c (cdmlib): fixing syntax problems
- 04:55 PM Revision 34a979b1 (taxeditor): Made file extensions lower case. Was the reason that images did not show in the released version of the help plugin
- 03:53 PM Revision 38f1558f (taxeditor): Fixed #2435
- 03:04 PM Revision 2a3be6c7 (cdmlib): re-integrating branch cdmlib/3.x-unitils-upgrade
- 02:08 PM Revision b68d4791 (cdmlib): debug and log
- 02:02 PM Revision cc37e049 (cdmlib): logging log transaction binding (disabled)
- 10:23 AM Revision e991a702 (cdmlib): bugfix for TaxonServiceImplTests
- 10:13 AM Revision 82a67f71 (cdmlib): test to fix the compilation error in TcsXmlExportState
- 10:08 AM Revision abc8f6f3 (cdmlib): bugfix for TaxonServiceImplTests
02/27/2012
- 11:30 PM Revision 9a971015 (cdmlib-apps): first verson of Index Fungorum import
- 09:46 PM Revision 1a12a202 (cdmlib): ready to be reintegrated into trunk
- 09:37 PM Revision ed5f901b (cdmlib): cdmlib-ext ready for unitils 3
- 06:49 PM Revision f041d9da (cdmlib-apps): minor
- 06:45 PM Revision c4f01dd0 (cdmlib-apps): minor
- 06:44 PM Revision 00b93cdd (cdmlib): getAllRelationships reimplemented to match only relevant relationship classes,
- Export generics include Transformer type
- 06:44 PM Revision 96533ef2 (cdmlib-apps): getAllRelationships reimplemented to match only relevant relationship classes,
- Export generics include Transformer type
- 06:29 PM Revision 3615aa8e (cdm-dataportal): removed debugging code
- 06:20 PM Revision 1c0bd967 (cdm-dataportal): Added method to combine multiple Description Views for different description types into a single text file
- 05:42 PM Revision ed41a3cc (cdmlib): fixing some test, but also ignoring some since i am running out of time - sorry for that
- 02:37 PM Revision 032afbf4 (cdm-dataportal): cherry picking r13961 r14262 from http://dev.e-taxonomy.eu/svn/branches/drupal/Kew_dataportal/
- 02:11 PM Revision 1e3358ea (cdm-dataportal): launch config modified
- 01:40 PM Revision 1a1c24e1 (cdm-dataportal): AT: Comminting bug fixing for dataportal
- 11:56 AM Revision 2d16c46a (cdmlib): remove imports
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