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bug #9895
closedMultiple representations of the same entity after move of synonym
Start date:
Due date:
% Done:
100%
Estimated time:
Severity:
normal
Found in Version:
Description
This exception appears when moving a synonym to another taxon which is already open and add this synonym to another homotypic group.
last remote method : http://localhost:8080/remoting/taxonnode.service
last remote request client time : 2021-12-10T10:03:22.921
client error time : 2021-12-10T10:03:23.437
login : admin
editor version : 5.29.0.qualifier
server : localhost (localhost-dev)
schema version : 5.27.1.0.20210922
os : Windows Server 2012 R2 6.3 amd64
java : 1.8.0_121
org.eclipse.e4.core.di.InjectionException: java.lang.IllegalStateException: Multiple representations of the same entity [eu.etaxonomy.cdm.model.name.HomotypicalGroup#26361] are being merged. Detached: [HomotypicalGroup#26361<a8aac1f2-9197-4acf-9f65-86d642ea954e>]; Detached: [HomotypicalGroup#26361<a8aac1f2-9197-4acf-9f65-86d642ea954e>]
at org.eclipse.e4.core.internal.di.MethodRequestor.execute(MethodRequestor.java:65)
at org.eclipse.e4.core.internal.di.InjectorImpl.invokeUsingClass(InjectorImpl.java:282)
at org.eclipse.e4.core.internal.di.InjectorImpl.invoke(InjectorImpl.java:247)
at org.eclipse.e4.core.contexts.ContextInjectionFactory.invoke(ContextInjectionFactory.java:90)
at org.eclipse.e4.ui.internal.workbench.PartServiceSaveHandler.save(PartServiceSaveHandler.java:57)
at org.eclipse.ui.internal.WorkbenchWindow$7.save(WorkbenchWindow.java:594)
at org.eclipse.e4.ui.internal.workbench.PartServiceImpl.savePart(PartServiceImpl.java:1390)
at eu.etaxonomy.taxeditor.workbench.SaveHandler.execute(SaveHandler.java:38)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:498)
at org.eclipse.e4.core.internal.di.MethodRequestor.execute(MethodRequestor.java:55)
at org.eclipse.e4.core.internal.di.InjectorImpl.invokeUsingClass(InjectorImpl.java:282)
at org.eclipse.e4.core.internal.di.InjectorImpl.invoke(InjectorImpl.java:264)
at org.eclipse.e4.core.contexts.ContextInjectionFactory.invoke(ContextInjectionFactory.java:132)
at org.eclipse.e4.core.commands.internal.HandlerServiceHandler.execute(HandlerServiceHandler.java:152)
at org.eclipse.core.commands.Command.executeWithChecks(Command.java:494)
at org.eclipse.core.commands.ParameterizedCommand.executeWithChecks(ParameterizedCommand.java:488)
at org.eclipse.e4.core.commands.internal.HandlerServiceImpl.executeHandler(HandlerServiceImpl.java:210)
at org.eclipse.e4.ui.workbench.renderers.swt.HandledContributionItem.executeItem(HandledContributionItem.java:433)
at org.eclipse.e4.ui.workbench.renderers.swt.AbstractContributionItem.handleWidgetSelection(AbstractContributionItem.java:454)
at org.eclipse.e4.ui.workbench.renderers.swt.AbstractContributionItem$3.handleEvent(AbstractContributionItem.java:482)
at org.eclipse.swt.widgets.EventTable.sendEvent(EventTable.java:84)
at org.eclipse.swt.widgets.Display.sendEvent(Display.java:4418)
at org.eclipse.swt.widgets.Widget.sendEvent(Widget.java:1079)
at org.eclipse.swt.widgets.Display.runDeferredEvents(Display.java:4236)
at org.eclipse.swt.widgets.Display.readAndDispatch(Display.java:3824)
at org.eclipse.e4.ui.internal.workbench.swt.PartRenderingEngine$4.run(PartRenderingEngine.java:1121)
at org.eclipse.core.databinding.observable.Realm.runWithDefault(Realm.java:336)
at org.eclipse.e4.ui.internal.workbench.swt.PartRenderingEngine.run(PartRenderingEngine.java:1022)
at org.eclipse.e4.ui.internal.workbench.E4Workbench.createAndRunUI(E4Workbench.java:150)
at org.eclipse.ui.internal.Workbench$5.run(Workbench.java:693)
at org.eclipse.core.databinding.observable.Realm.runWithDefault(Realm.java:336)
at org.eclipse.ui.internal.Workbench.createAndRunWorkbench(Workbench.java:610)
at org.eclipse.ui.PlatformUI.createAndRunWorkbench(PlatformUI.java:148)
at eu.etaxonomy.taxeditor.Application.start(Application.java:20)
at org.eclipse.equinox.internal.app.EclipseAppHandle.run(EclipseAppHandle.java:196)
at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.runApplication(EclipseAppLauncher.java:134)
at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.start(EclipseAppLauncher.java:104)
at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:388)
at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:243)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:498)
at org.eclipse.equinox.launcher.Main.invokeFramework(Main.java:673)
at org.eclipse.equinox.launcher.Main.basicRun(Main.java:610)
at org.eclipse.equinox.launcher.Main.run(Main.java:1519)
at org.eclipse.equinox.launcher.Main.main(Main.java:1492)
Caused by: java.lang.IllegalStateException: Multiple representations of the same entity [eu.etaxonomy.cdm.model.name.HomotypicalGroup#26361] are being merged. Detached: [HomotypicalGroup#26361<a8aac1f2-9197-4acf-9f65-86d642ea954e>]; Detached: [HomotypicalGroup#26361<a8aac1f2-9197-4acf-9f65-86d642ea954e>]
at org.hibernate.event.internal.EntityCopyNotAllowedObserver.entityCopyDetected(EntityCopyNotAllowedObserver.java:37)
at org.hibernate.event.internal.MergeContext.put(MergeContext.java:245)
at org.hibernate.event.internal.DefaultMergeEventListener.entityIsDetached(DefaultMergeEventListener.java:303)
at org.hibernate.event.internal.DefaultMergeEventListener.onMerge(DefaultMergeEventListener.java:169)
at org.hibernate.internal.SessionImpl.fireMerge(SessionImpl.java:853)
at org.hibernate.internal.SessionImpl.merge(SessionImpl.java:835)
at org.hibernate.engine.spi.CascadingActions$6.cascade(CascadingActions.java:260)
at org.hibernate.engine.internal.Cascade.cascadeToOne(Cascade.java:423)
at org.hibernate.engine.internal.Cascade.cascadeAssociation(Cascade.java:348)
at org.hibernate.engine.internal.Cascade.cascadeProperty(Cascade.java:187)
at org.hibernate.engine.internal.Cascade.cascade(Cascade.java:136)
at org.hibernate.event.internal.DefaultMergeEventListener.cascadeOnMerge(DefaultMergeEventListener.java:460)
at org.hibernate.event.internal.DefaultMergeEventListener.entityIsDetached(DefaultMergeEventListener.java:326)
at org.hibernate.event.internal.DefaultMergeEventListener.onMerge(DefaultMergeEventListener.java:169)
at org.hibernate.internal.SessionImpl.fireMerge(SessionImpl.java:853)
at org.hibernate.internal.SessionImpl.merge(SessionImpl.java:835)
at org.hibernate.engine.spi.CascadingActions$6.cascade(CascadingActions.java:260)
at org.hibernate.engine.internal.Cascade.cascadeToOne(Cascade.java:423)
at org.hibernate.engine.internal.Cascade.cascadeAssociation(Cascade.java:348)
at org.hibernate.engine.internal.Cascade.cascadeProperty(Cascade.java:187)
at org.hibernate.engine.internal.Cascade.cascade(Cascade.java:136)
at org.hibernate.event.internal.DefaultMergeEventListener.cascadeOnMerge(DefaultMergeEventListener.java:460)
at org.hibernate.event.internal.DefaultMergeEventListener.entityIsDetached(DefaultMergeEventListener.java:326)
at org.hibernate.event.internal.DefaultMergeEventListener.onMerge(DefaultMergeEventListener.java:169)
at org.hibernate.internal.SessionImpl.fireMerge(SessionImpl.java:853)
at org.hibernate.internal.SessionImpl.merge(SessionImpl.java:835)
at org.hibernate.engine.spi.CascadingActions$6.cascade(CascadingActions.java:260)
at org.hibernate.engine.internal.Cascade.cascadeToOne(Cascade.java:423)
at org.hibernate.engine.internal.Cascade.cascadeAssociation(Cascade.java:348)
at org.hibernate.engine.internal.Cascade.cascadeProperty(Cascade.java:187)
at org.hibernate.engine.internal.Cascade.cascadeCollectionElements(Cascade.java:456)
at org.hibernate.engine.internal.Cascade.cascadeCollection(Cascade.java:388)
at org.hibernate.engine.internal.Cascade.cascadeAssociation(Cascade.java:351)
at org.hibernate.engine.internal.Cascade.cascadeProperty(Cascade.java:187)
at org.hibernate.engine.internal.Cascade.cascade(Cascade.java:136)
at org.hibernate.event.internal.DefaultMergeEventListener.cascadeOnMerge(DefaultMergeEventListener.java:460)
at org.hibernate.event.internal.DefaultMergeEventListener.entityIsDetached(DefaultMergeEventListener.java:326)
at org.hibernate.event.internal.DefaultMergeEventListener.onMerge(DefaultMergeEventListener.java:169)
at org.hibernate.internal.SessionImpl.fireMerge(SessionImpl.java:853)
at org.hibernate.internal.SessionImpl.merge(SessionImpl.java:835)
at org.hibernate.engine.spi.CascadingActions$6.cascade(CascadingActions.java:260)
at org.hibernate.engine.internal.Cascade.cascadeToOne(Cascade.java:423)
at org.hibernate.engine.internal.Cascade.cascadeAssociation(Cascade.java:348)
at org.hibernate.engine.internal.Cascade.cascadeProperty(Cascade.java:187)
at org.hibernate.engine.internal.Cascade.cascade(Cascade.java:136)
at org.hibernate.event.internal.DefaultMergeEventListener.cascadeOnMerge(DefaultMergeEventListener.java:460)
at org.hibernate.event.internal.DefaultMergeEventListener.entityIsDetached(DefaultMergeEventListener.java:326)
at org.hibernate.event.internal.DefaultMergeEventListener.onMerge(DefaultMergeEventListener.java:169)
at org.hibernate.event.internal.DefaultMergeEventListener.onMerge(DefaultMergeEventListener.java:68)
at org.hibernate.internal.SessionImpl.fireMerge(SessionImpl.java:843)
at org.hibernate.internal.SessionImpl.merge(SessionImpl.java:825)
at org.hibernate.internal.SessionImpl.merge(SessionImpl.java:830)
at eu.etaxonomy.cdm.persistence.dao.hibernate.common.CdmEntityDaoBase.merge(CdmEntityDaoBase.java:289)
at eu.etaxonomy.cdm.api.service.ServiceBase.merge(ServiceBase.java:240)
at eu.etaxonomy.cdm.api.service.ServiceBase.merge(ServiceBase.java:1)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:498)
at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
at org.springframework.transaction.interceptor.TransactionInterceptor$1.proceedWithInvocation(TransactionInterceptor.java:99)
at org.springframework.transaction.interceptor.TransactionAspectSupport.invokeWithinTransaction(TransactionAspectSupport.java:283)
at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:96)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
at com.sun.proxy.$Proxy190.merge(Unknown Source)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:498)
at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
at org.springframework.remoting.support.RemoteInvocationTraceInterceptor.invoke(RemoteInvocationTraceInterceptor.java:78)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
at com.sun.proxy.$Proxy299.merge(Unknown Source)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:498)
at org.springframework.remoting.support.RemoteInvocation.invoke(RemoteInvocation.java:212)
at eu.etaxonomy.cdm.api.remoting.DebuggingRemoteInvocationExecutor.invoke(DebuggingRemoteInvocationExecutor.java:52)
at org.springframework.remoting.support.RemoteInvocationBasedExporter.invoke(RemoteInvocationBasedExporter.java:78)
at org.springframework.remoting.support.RemoteInvocationBasedExporter.invokeAndCreateResult(RemoteInvocationBasedExporter.java:114)
at org.springframework.remoting.httpinvoker.HttpInvokerServiceExporter.handleRequest(HttpInvokerServiceExporter.java:80)
at org.springframework.web.servlet.mvc.HttpRequestHandlerAdapter.handle(HttpRequestHandlerAdapter.java:51)
at org.springframework.web.servlet.DispatcherServlet.doDispatch(DispatcherServlet.java:967)
at org.springframework.web.servlet.DispatcherServlet.doService(DispatcherServlet.java:901)
at org.springframework.web.servlet.FrameworkServlet.processRequest(FrameworkServlet.java:970)
at org.springframework.web.servlet.FrameworkServlet.doPost(FrameworkServlet.java:872)
at javax.servlet.http.HttpServlet.service(HttpServlet.java:707)
at org.springframework.web.servlet.FrameworkServlet.service(FrameworkServlet.java:846)
at javax.servlet.http.HttpServlet.service(HttpServlet.java:790)
at org.eclipse.jetty.servlet.ServletHolder.handle(ServletHolder.java:848)
at org.eclipse.jetty.servlet.ServletHandler$CachedChain.doFilter(ServletHandler.java:1780)
at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:317)
at org.springframework.security.web.access.intercept.FilterSecurityInterceptor.invoke(FilterSecurityInterceptor.java:127)
at org.springframework.security.web.access.intercept.FilterSecurityInterceptor.doFilter(FilterSecurityInterceptor.java:91)
at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:331)
at org.springframework.security.web.access.ExceptionTranslationFilter.doFilter(ExceptionTranslationFilter.java:114)
at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:331)
at org.springframework.security.web.session.SessionManagementFilter.doFilter(SessionManagementFilter.java:137)
at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:331)
at org.springframework.security.web.servletapi.SecurityContextHolderAwareRequestFilter.doFilter(SecurityContextHolderAwareRequestFilter.java:170)
at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:331)
at org.springframework.security.web.savedrequest.RequestCacheAwareFilter.doFilter(RequestCacheAwareFilter.java:63)
at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:331)
at org.springframework.security.web.authentication.www.BasicAuthenticationFilter.doFilterInternal(BasicAuthenticationFilter.java:215)
at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107)
at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:331)
at org.springframework.security.web.authentication.logout.LogoutFilter.doFilter(LogoutFilter.java:116)
at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:331)
at org.springframework.security.web.header.HeaderWriterFilter.doFilterInternal(HeaderWriterFilter.java:66)
at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107)
at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:331)
at org.springframework.security.web.context.SecurityContextPersistenceFilter.doFilter(SecurityContextPersistenceFilter.java:105)
at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:331)
at org.springframework.security.web.context.request.async.WebAsyncManagerIntegrationFilter.doFilterInternal(WebAsyncManagerIntegrationFilter.java:56)
at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107)
at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:331)
at org.springframework.security.web.FilterChainProxy.doFilterInternal(FilterChainProxy.java:214)
at org.springframework.security.web.FilterChainProxy.doFilter(FilterChainProxy.java:177)
at org.springframework.web.filter.DelegatingFilterProxy.invokeDelegate(DelegatingFilterProxy.java:347)
at org.springframework.web.filter.DelegatingFilterProxy.doFilter(DelegatingFilterProxy.java:263)
at org.eclipse.jetty.servlet.ServletHandler$CachedChain.doFilter(ServletHandler.java:1767)
at eu.etaxonomy.cdm.servlet.DateHeaderFilter.doFilter(DateHeaderFilter.java:55)
at org.eclipse.jetty.servlet.ServletHandler$CachedChain.doFilter(ServletHandler.java:1767)
at org.springframework.web.filter.CharacterEncodingFilter.doFilterInternal(CharacterEncodingFilter.java:197)
at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107)
at org.eclipse.jetty.servlet.ServletHandler$CachedChain.doFilter(ServletHandler.java:1759)
at org.eclipse.jetty.servlet.ServletHandler.doHandle(ServletHandler.java:583)
at org.eclipse.jetty.server.handler.ScopedHandler.handle(ScopedHandler.java:143)
at org.eclipse.jetty.security.SecurityHandler.handle(SecurityHandler.java:548)
at org.eclipse.jetty.server.session.SessionHandler.doHandle(SessionHandler.java:226)
at org.eclipse.jetty.server.handler.ContextHandler.doHandle(ContextHandler.java:1180)
at org.eclipse.jetty.servlet.ServletHandler.doScope(ServletHandler.java:513)
at org.eclipse.jetty.server.session.SessionHandler.doScope(SessionHandler.java:185)
at org.eclipse.jetty.server.handler.ContextHandler.doScope(ContextHandler.java:1112)
at org.eclipse.jetty.server.handler.ScopedHandler.handle(ScopedHandler.java:141)
at org.eclipse.jetty.server.handler.HandlerWrapper.handle(HandlerWrapper.java:134)
at org.eclipse.jetty.server.Server.handle(Server.java:539)
at org.eclipse.jetty.server.HttpChannel.handle(HttpChannel.java:333)
at org.eclipse.jetty.server.HttpConnection.onFillable(HttpConnection.java:251)
at org.eclipse.jetty.io.AbstractConnection$ReadCallback.succeeded(AbstractConnection.java:283)
at org.eclipse.jetty.io.FillInterest.fillable(FillInterest.java:108)
at org.eclipse.jetty.io.SelectChannelEndPoint$2.run(SelectChannelEndPoint.java:93)
at org.eclipse.jetty.util.thread.strategy.ExecuteProduceConsume.executeProduceConsume(ExecuteProduceConsume.java:303)
at org.eclipse.jetty.util.thread.strategy.ExecuteProduceConsume.produceConsume(ExecuteProduceConsume.java:148)
at org.eclipse.jetty.util.thread.strategy.ExecuteProduceConsume.run(ExecuteProduceConsume.java:136)
at org.eclipse.jetty.util.thread.QueuedThreadPool.runJob(QueuedThreadPool.java:671)
at org.eclipse.jetty.util.thread.QueuedThreadPool$2.run(QueuedThreadPool.java:589)
at java.lang.Thread.run(Thread.java:745)
at org.springframework.remoting.support.RemoteInvocationUtils.fillInClientStackTraceIfPossible(RemoteInvocationUtils.java:45)
at org.springframework.remoting.support.RemoteInvocationResult.recreate(RemoteInvocationResult.java:149)
at org.springframework.remoting.support.RemoteInvocationBasedAccessor.recreateRemoteInvocationResult(RemoteInvocationBasedAccessor.java:85)
at org.springframework.remoting.httpinvoker.HttpInvokerClientInterceptor.invoke(HttpInvokerClientInterceptor.java:158)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
at com.sun.proxy.$Proxy60.merge(Unknown Source)
at eu.etaxonomy.taxeditor.editor.e4.TaxonEditorInputE4.merge(TaxonEditorInputE4.java:430)
at eu.etaxonomy.taxeditor.editor.name.e4.TaxonNameEditorE4.save(TaxonNameEditorE4.java:411)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:498)
at org.eclipse.e4.core.internal.di.MethodRequestor.execute(MethodRequestor.java:55)
... 49 more
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