bug #9398
closedObjectNotFoundException when removing a synonym that is used as NameInSource
100%
Description
Either this is a problem on the order of operations during save. Or it is a general issue with merge where it could be a problem that the name is loaded with taxonBase initialized. Or any other problem.
How to reproduce:
- Open any taxon with a synonym in name editor
- use the synonym name as NameUsedInSource of a fact of this taxon
- save
- delete the synonym
- save the taxon again => exception
After reopening the name editor without saving the synonym is still gone (and also in the DB there is a delete event in TaxonBase for the synonym so it looks like the failing merge operation somehow runs ofter the delete operation.
last remote method : http://test.e-taxonomy.eu:80/cdmserver/rem_conf_am/remoting/taxonnode.service last remote request client time : 2021-01-18T14:13:09.862 last remote request response header time : Mon, 18 Jan 2021 14:13:09 GMT client error time : 2021-01-18T14:13:09.971 login : admin editor version : 5.19.0.202101172349 server : test.e-taxonomy.eu (edit-test) / rem_conf_am schema version : 5.18.6.0.20201124 os : Windows Server 2012 R2 6.3 amd64 java : 1.8.0_121 org.eclipse.e4.core.di.InjectionException: org.hibernate.ObjectNotFoundException: No row with the given identifier exists: [eu.etaxonomy.cdm.model.taxon.TaxonBase#18026] at org.eclipse.e4.core.internal.di.MethodRequestor.execute(MethodRequestor.java:65) at org.eclipse.e4.core.internal.di.InjectorImpl.invokeUsingClass(InjectorImpl.java:282) at org.eclipse.e4.core.internal.di.InjectorImpl.invoke(InjectorImpl.java:247) at org.eclipse.e4.core.contexts.ContextInjectionFactory.invoke(ContextInjectionFactory.java:90) at org.eclipse.e4.ui.internal.workbench.PartServiceSaveHandler.save(PartServiceSaveHandler.java:57) at org.eclipse.ui.internal.WorkbenchWindow$7.save(WorkbenchWindow.java:594) at org.eclipse.e4.ui.internal.workbench.PartServiceImpl.savePart(PartServiceImpl.java:1390) at eu.etaxonomy.taxeditor.workbench.SaveHandler.execute(SaveHandler.java:38) at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:498) at org.eclipse.e4.core.internal.di.MethodRequestor.execute(MethodRequestor.java:55) at org.eclipse.e4.core.internal.di.InjectorImpl.invokeUsingClass(InjectorImpl.java:282) at org.eclipse.e4.core.internal.di.InjectorImpl.invoke(InjectorImpl.java:264) at org.eclipse.e4.core.contexts.ContextInjectionFactory.invoke(ContextInjectionFactory.java:132) at org.eclipse.e4.core.commands.internal.HandlerServiceHandler.execute(HandlerServiceHandler.java:152) at org.eclipse.core.commands.Command.executeWithChecks(Command.java:494) at org.eclipse.core.commands.ParameterizedCommand.executeWithChecks(ParameterizedCommand.java:488) at org.eclipse.e4.core.commands.internal.HandlerServiceImpl.executeHandler(HandlerServiceImpl.java:210) at org.eclipse.e4.ui.workbench.renderers.swt.HandledContributionItem.executeItem(HandledContributionItem.java:433) at org.eclipse.e4.ui.workbench.renderers.swt.AbstractContributionItem.handleWidgetSelection(AbstractContributionItem.java:454) at org.eclipse.e4.ui.workbench.renderers.swt.AbstractContributionItem$3.handleEvent(AbstractContributionItem.java:482) at org.eclipse.swt.widgets.EventTable.sendEvent(EventTable.java:84) at org.eclipse.swt.widgets.Display.sendEvent(Display.java:4418) at org.eclipse.swt.widgets.Widget.sendEvent(Widget.java:1079) at org.eclipse.swt.widgets.Display.runDeferredEvents(Display.java:4236) at org.eclipse.swt.widgets.Display.readAndDispatch(Display.java:3824) at org.eclipse.e4.ui.internal.workbench.swt.PartRenderingEngine$4.run(PartRenderingEngine.java:1121) at org.eclipse.core.databinding.observable.Realm.runWithDefault(Realm.java:336) at org.eclipse.e4.ui.internal.workbench.swt.PartRenderingEngine.run(PartRenderingEngine.java:1022) at org.eclipse.e4.ui.internal.workbench.E4Workbench.createAndRunUI(E4Workbench.java:150) at org.eclipse.ui.internal.Workbench$5.run(Workbench.java:693) at org.eclipse.core.databinding.observable.Realm.runWithDefault(Realm.java:336) at org.eclipse.ui.internal.Workbench.createAndRunWorkbench(Workbench.java:610) at org.eclipse.ui.PlatformUI.createAndRunWorkbench(PlatformUI.java:148) at eu.etaxonomy.taxeditor.Application.start(Application.java:20) at org.eclipse.equinox.internal.app.EclipseAppHandle.run(EclipseAppHandle.java:196) at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.runApplication(EclipseAppLauncher.java:134) at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.start(EclipseAppLauncher.java:104) at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:388) at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:243) at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:498) at org.eclipse.equinox.launcher.Main.invokeFramework(Main.java:673) at org.eclipse.equinox.launcher.Main.basicRun(Main.java:610) at org.eclipse.equinox.launcher.Main.run(Main.java:1519) Caused by: org.hibernate.ObjectNotFoundException: No row with the given identifier exists: [eu.etaxonomy.cdm.model.taxon.TaxonBase#18026] at org.hibernate.boot.internal.StandardEntityNotFoundDelegate.handleEntityNotFound(StandardEntityNotFoundDelegate.java:28) at org.hibernate.event.internal.DefaultLoadEventListener.load(DefaultLoadEventListener.java:227) at org.hibernate.event.internal.DefaultLoadEventListener.proxyOrLoad(DefaultLoadEventListener.java:278) at org.hibernate.event.internal.DefaultLoadEventListener.doOnLoad(DefaultLoadEventListener.java:121) at org.hibernate.event.internal.DefaultLoadEventListener.onLoad(DefaultLoadEventListener.java:89) at org.hibernate.internal.SessionImpl.fireLoad(SessionImpl.java:1142) at org.hibernate.internal.SessionImpl.internalLoad(SessionImpl.java:1025) at org.hibernate.type.EntityType.resolveIdentifier(EntityType.java:641) at org.hibernate.type.EntityType.resolve(EntityType.java:433) at org.hibernate.type.ManyToOneType.resolve(ManyToOneType.java:227) at org.hibernate.type.EntityType.replace(EntityType.java:332) at org.hibernate.type.CollectionType.replaceElements(CollectionType.java:518) at org.hibernate.type.CollectionType.replace(CollectionType.java:663) at org.hibernate.type.TypeHelper.replace(TypeHelper.java:177) at org.hibernate.event.internal.DefaultMergeEventListener.copyValues(DefaultMergeEventListener.java:393) at org.hibernate.event.internal.DefaultMergeEventListener.entityIsDetached(DefaultMergeEventListener.java:327) at org.hibernate.event.internal.DefaultMergeEventListener.onMerge(DefaultMergeEventListener.java:169) at org.hibernate.internal.SessionImpl.fireMerge(SessionImpl.java:853) at org.hibernate.internal.SessionImpl.merge(SessionImpl.java:835) at org.hibernate.engine.spi.CascadingActions$6.cascade(CascadingActions.java:260) at org.hibernate.engine.internal.Cascade.cascadeToOne(Cascade.java:423) at org.hibernate.engine.internal.Cascade.cascadeAssociation(Cascade.java:348) at org.hibernate.engine.internal.Cascade.cascadeProperty(Cascade.java:187) at org.hibernate.engine.internal.Cascade.cascade(Cascade.java:136) at org.hibernate.event.internal.DefaultMergeEventListener.cascadeOnMerge(DefaultMergeEventListener.java:460) at org.hibernate.event.internal.DefaultMergeEventListener.entityIsDetached(DefaultMergeEventListener.java:326) at org.hibernate.event.internal.DefaultMergeEventListener.onMerge(DefaultMergeEventListener.java:169) at org.hibernate.internal.SessionImpl.fireMerge(SessionImpl.java:853) at org.hibernate.internal.SessionImpl.merge(SessionImpl.java:835) at org.hibernate.engine.spi.CascadingActions$6.cascade(CascadingActions.java:260) at org.hibernate.engine.internal.Cascade.cascadeToOne(Cascade.java:423) at org.hibernate.engine.internal.Cascade.cascadeAssociation(Cascade.java:348) at org.hibernate.engine.internal.Cascade.cascadeProperty(Cascade.java:187) at org.hibernate.engine.internal.Cascade.cascadeCollectionElements(Cascade.java:456) at org.hibernate.engine.internal.Cascade.cascadeCollection(Cascade.java:388) at org.hibernate.engine.internal.Cascade.cascadeAssociation(Cascade.java:351) at org.hibernate.engine.internal.Cascade.cascadeProperty(Cascade.java:187) at org.hibernate.engine.internal.Cascade.cascade(Cascade.java:136) at org.hibernate.event.internal.DefaultMergeEventListener.cascadeOnMerge(DefaultMergeEventListener.java:460) at org.hibernate.event.internal.DefaultMergeEventListener.entityIsDetached(DefaultMergeEventListener.java:326) at org.hibernate.event.internal.DefaultMergeEventListener.onMerge(DefaultMergeEventListener.java:169) at org.hibernate.internal.SessionImpl.fireMerge(SessionImpl.java:853) at org.hibernate.internal.SessionImpl.merge(SessionImpl.java:835) at org.hibernate.engine.spi.CascadingActions$6.cascade(CascadingActions.java:260) at org.hibernate.engine.internal.Cascade.cascadeToOne(Cascade.java:423) at org.hibernate.engine.internal.Cascade.cascadeAssociation(Cascade.java:348) at org.hibernate.engine.internal.Cascade.cascadeProperty(Cascade.java:187) at org.hibernate.engine.internal.Cascade.cascadeCollectionElements(Cascade.java:456) at org.hibernate.engine.internal.Cascade.cascadeCollection(Cascade.java:388) at org.hibernate.engine.internal.Cascade.cascadeAssociation(Cascade.java:351) at org.hibernate.engine.internal.Cascade.cascadeProperty(Cascade.java:187) at org.hibernate.engine.internal.Cascade.cascade(Cascade.java:136) at org.hibernate.event.internal.DefaultMergeEventListener.cascadeOnMerge(DefaultMergeEventListener.java:460) at org.hibernate.event.internal.DefaultMergeEventListener.entityIsDetached(DefaultMergeEventListener.java:326) at org.hibernate.event.internal.DefaultMergeEventListener.onMerge(DefaultMergeEventListener.java:169) at org.hibernate.internal.SessionImpl.fireMerge(SessionImpl.java:853) at org.hibernate.internal.SessionImpl.merge(SessionImpl.java:835) at org.hibernate.engine.spi.CascadingActions$6.cascade(CascadingActions.java:260) at org.hibernate.engine.internal.Cascade.cascadeToOne(Cascade.java:423) at org.hibernate.engine.internal.Cascade.cascadeAssociation(Cascade.java:348) at org.hibernate.engine.internal.Cascade.cascadeProperty(Cascade.java:187) at org.hibernate.engine.internal.Cascade.cascadeCollectionElements(Cascade.java:456) at org.hibernate.engine.internal.Cascade.cascadeCollection(Cascade.java:388) at org.hibernate.engine.internal.Cascade.cascadeAssociation(Cascade.java:351) at org.hibernate.engine.internal.Cascade.cascadeProperty(Cascade.java:187) at org.hibernate.engine.internal.Cascade.cascade(Cascade.java:136) at org.hibernate.event.internal.DefaultMergeEventListener.cascadeOnMerge(DefaultMergeEventListener.java:460) at org.hibernate.event.internal.DefaultMergeEventListener.entityIsDetached(DefaultMergeEventListener.java:326) at org.hibernate.event.internal.DefaultMergeEventListener.onMerge(DefaultMergeEventListener.java:169) at org.hibernate.internal.SessionImpl.fireMerge(SessionImpl.java:853) at org.hibernate.internal.SessionImpl.merge(SessionImpl.java:835) at org.hibernate.engine.spi.CascadingActions$6.cascade(CascadingActions.java:260) at org.hibernate.engine.internal.Cascade.cascadeToOne(Cascade.java:423) at org.hibernate.engine.internal.Cascade.cascadeAssociation(Cascade.java:348) at org.hibernate.engine.internal.Cascade.cascadeProperty(Cascade.java:187) at org.hibernate.engine.internal.Cascade.cascade(Cascade.java:136) at org.hibernate.event.internal.DefaultMergeEventListener.cascadeOnMerge(DefaultMergeEventListener.java:460) at org.hibernate.event.internal.DefaultMergeEventListener.entityIsDetached(DefaultMergeEventListener.java:326) at org.hibernate.event.internal.DefaultMergeEventListener.onMerge(DefaultMergeEventListener.java:169) at org.hibernate.event.internal.DefaultMergeEventListener.onMerge(DefaultMergeEventListener.java:68) at org.hibernate.internal.SessionImpl.fireMerge(SessionImpl.java:843) at org.hibernate.internal.SessionImpl.merge(SessionImpl.java:825) at org.hibernate.internal.SessionImpl.merge(SessionImpl.java:830) at eu.etaxonomy.cdm.persistence.dao.hibernate.common.CdmEntityDaoBase.merge(CdmEntityDaoBase.java:289) at eu.etaxonomy.cdm.api.service.ServiceBase.merge(ServiceBase.java:234) at eu.etaxonomy.cdm.api.service.ServiceBase.merge(ServiceBase.java:42) at sun.reflect.GeneratedMethodAccessor1795.invoke(Unknown Source) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:498) at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333) at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190) at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157) at org.springframework.transaction.interceptor.TransactionInterceptor$1.proceedWithInvocation(TransactionInterceptor.java:99) at org.springframework.transaction.interceptor.TransactionAspectSupport.invokeWithinTransaction(TransactionAspectSupport.java:283) at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:96) at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213) at com.sun.proxy.$Proxy664.merge(Unknown Source) at sun.reflect.GeneratedMethodAccessor1795.invoke(Unknown Source) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:498) at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333) at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190) at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157) at org.springframework.remoting.support.RemoteInvocationTraceInterceptor.invoke(RemoteInvocationTraceInterceptor.java:78) at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213) at com.sun.proxy.$Proxy1038.merge(Unknown Source) at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:498) at org.springframework.remoting.support.RemoteInvocation.invoke(RemoteInvocation.java:212) at eu.etaxonomy.cdm.api.remoting.DebuggingRemoteInvocationExecutor.invoke(DebuggingRemoteInvocationExecutor.java:52) at org.springframework.remoting.support.RemoteInvocationBasedExporter.invoke(RemoteInvocationBasedExporter.java:78) at org.springframework.remoting.support.RemoteInvocationBasedExporter.invokeAndCreateResult(RemoteInvocationBasedExporter.java:114) at org.springframework.remoting.httpinvoker.HttpInvokerServiceExporter.handleRequest(HttpInvokerServiceExporter.java:80) at org.springframework.web.servlet.mvc.HttpRequestHandlerAdapter.handle(HttpRequestHandlerAdapter.java:51) at org.springframework.web.servlet.DispatcherServlet.doDispatch(DispatcherServlet.java:967) at org.springframework.web.servlet.DispatcherServlet.doService(DispatcherServlet.java:901) at org.springframework.web.servlet.FrameworkServlet.processRequest(FrameworkServlet.java:970) at org.springframework.web.servlet.FrameworkServlet.doPost(FrameworkServlet.java:872) at javax.servlet.http.HttpServlet.service(HttpServlet.java:707) at org.springframework.web.servlet.FrameworkServlet.service(FrameworkServlet.java:846) at javax.servlet.http.HttpServlet.service(HttpServlet.java:790) at org.eclipse.jetty.servlet.ServletHolder$NotAsyncServlet.service(ServletHolder.java:1395) at org.eclipse.jetty.servlet.ServletHolder.handle(ServletHolder.java:755) at org.eclipse.jetty.servlet.ServletHandler$CachedChain.doFilter(ServletHandler.java:1617) at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:317) at org.springframework.security.web.access.intercept.FilterSecurityInterceptor.invoke(FilterSecurityInterceptor.java:127) at org.springframework.security.web.access.intercept.FilterSecurityInterceptor.doFilter(FilterSecurityInterceptor.java:91) at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:331) at org.springframework.security.web.access.ExceptionTranslationFilter.doFilter(ExceptionTranslationFilter.java:114) at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:331) at org.springframework.security.web.session.SessionManagementFilter.doFilter(SessionManagementFilter.java:137) at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:331) at org.springframework.security.web.servletapi.SecurityContextHolderAwareRequestFilter.doFilter(SecurityContextHolderAwareRequestFilter.java:170) at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:331) at org.springframework.security.web.savedrequest.RequestCacheAwareFilter.doFilter(RequestCacheAwareFilter.java:63) at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:331) at org.springframework.security.web.authentication.www.BasicAuthenticationFilter.doFilterInternal(BasicAuthenticationFilter.java:215) at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107) at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:331) at org.springframework.security.web.authentication.logout.LogoutFilter.doFilter(LogoutFilter.java:116) at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:331) at org.springframework.security.web.header.HeaderWriterFilter.doFilterInternal(HeaderWriterFilter.java:66) at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107) at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:331) at org.springframework.security.web.context.SecurityContextPersistenceFilter.doFilter(SecurityContextPersistenceFilter.java:105) at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:331) at org.springframework.security.web.context.request.async.WebAsyncManagerIntegrationFilter.doFilterInternal(WebAsyncManagerIntegrationFilter.java:56) at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107) at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:331) at org.springframework.security.web.FilterChainProxy.doFilterInternal(FilterChainProxy.java:214) at org.springframework.security.web.FilterChainProxy.doFilter(FilterChainProxy.java:177) at org.springframework.web.filter.DelegatingFilterProxy.invokeDelegate(DelegatingFilterProxy.java:347) at org.springframework.web.filter.DelegatingFilterProxy.doFilter(DelegatingFilterProxy.java:263) at org.eclipse.jetty.servlet.ServletHandler$CachedChain.doFilter(ServletHandler.java:1604) at eu.etaxonomy.cdm.servlet.DateHeaderFilter.doFilter(DateHeaderFilter.java:55) at org.eclipse.jetty.servlet.ServletHandler$CachedChain.doFilter(ServletHandler.java:1604) at org.springframework.web.filter.CharacterEncodingFilter.doFilterInternal(CharacterEncodingFilter.java:197) at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107) at org.eclipse.jetty.servlet.ServletHandler$CachedChain.doFilter(ServletHandler.java:1596) at org.eclipse.jetty.servlet.ServletHandler.doHandle(ServletHandler.java:545) at org.eclipse.jetty.server.handler.ScopedHandler.handle(ScopedHandler.java:143) at org.eclipse.jetty.security.SecurityHandler.handle(SecurityHandler.java:590) at org.eclipse.jetty.server.handler.HandlerWrapper.handle(HandlerWrapper.java:127) at org.eclipse.jetty.server.handler.ScopedHandler.nextHandle(ScopedHandler.java:235) at org.eclipse.jetty.server.session.SessionHandler.doHandle(SessionHandler.java:1607) at org.eclipse.jetty.server.handler.ScopedHandler.nextHandle(ScopedHandler.java:233) at org.eclipse.jetty.server.handler.ContextHandler.doHandle(ContextHandler.java:1297) at org.eclipse.jetty.server.handler.ScopedHandler.nextScope(ScopedHandler.java:188) at org.eclipse.jetty.servlet.ServletHandler.doScope(ServletHandler.java:485) at org.eclipse.jetty.server.session.SessionHandler.doScope(SessionHandler.java:1577) at org.eclipse.jetty.server.handler.ScopedHandler.nextScope(ScopedHandler.java:186) at org.eclipse.jetty.server.handler.ContextHandler.doScope(ContextHandler.java:1212) at org.eclipse.jetty.server.handler.ScopedHandler.handle(ScopedHandler.java:141) at org.eclipse.jetty.server.handler.HandlerWrapper.handle(HandlerWrapper.java:127) at eu.etaxonomy.cdm.server.logging.InstanceLogWrapper.handle(InstanceLogWrapper.java:47) at org.eclipse.jetty.server.handler.ContextHandlerCollection.handle(ContextHandlerCollection.java:221) at org.eclipse.jetty.server.handler.HandlerWrapper.handle(HandlerWrapper.java:127) at org.eclipse.jetty.server.Server.handle(Server.java:500) at org.eclipse.jetty.server.HttpChannel.lambda$handle$1(HttpChannel.java:383) at org.eclipse.jetty.server.HttpChannel.dispatch(HttpChannel.java:547) at org.eclipse.jetty.server.HttpChannel.handle(HttpChannel.java:375) at org.eclipse.jetty.server.HttpConnection.onFillable(HttpConnection.java:270) at org.eclipse.jetty.io.AbstractConnection$ReadCallback.succeeded(AbstractConnection.java:311) at org.eclipse.jetty.io.FillInterest.fillable(FillInterest.java:103) at org.eclipse.jetty.io.ChannelEndPoint$2.run(ChannelEndPoint.java:117) at org.eclipse.jetty.util.thread.strategy.EatWhatYouKill.runTask(EatWhatYouKill.java:336) at org.eclipse.jetty.util.thread.strategy.EatWhatYouKill.doProduce(EatWhatYouKill.java:313) at org.eclipse.jetty.util.thread.strategy.EatWhatYouKill.tryProduce(EatWhatYouKill.java:171) at org.eclipse.jetty.util.thread.strategy.EatWhatYouKill.run(EatWhatYouKill.java:129) at org.eclipse.jetty.util.thread.ReservedThreadExecutor$ReservedThread.run(ReservedThreadExecutor.java:388) at org.eclipse.jetty.util.thread.QueuedThreadPool.runJob(QueuedThreadPool.java:806) at org.eclipse.jetty.util.thread.QueuedThreadPool$Runner.run(QueuedThreadPool.java:938) at java.lang.Thread.run(Thread.java:748) at org.springframework.remoting.support.RemoteInvocationUtils.fillInClientStackTraceIfPossible(RemoteInvocationUtils.java:45) at org.springframework.remoting.support.RemoteInvocationResult.recreate(RemoteInvocationResult.java:149) at org.springframework.remoting.support.RemoteInvocationBasedAccessor.recreateRemoteInvocationResult(RemoteInvocationBasedAccessor.java:85) at org.springframework.remoting.httpinvoker.HttpInvokerClientInterceptor.invoke(HttpInvokerClientInterceptor.java:158) at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213) at com.sun.proxy.$Proxy49.merge(Unknown Source) at eu.etaxonomy.taxeditor.editor.e4.TaxonEditorInputE4.merge(TaxonEditorInputE4.java:428) at eu.etaxonomy.taxeditor.editor.name.e4.TaxonNameEditorE4.save(TaxonNameEditorE4.java:420) at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:498) at org.eclipse.e4.core.internal.di.MethodRequestor.execute(MethodRequestor.java:55) ... 48 more
Related issues
Updated by Andreas Müller about 3 years ago
- Related to feature request #6308: Add configuration dialog for the deletion of synonyms in name editor added
Updated by Katja Luther about 3 years ago
I think the problem is that the name used as "name used in source" still have the information to be the name of the deleted synonym during the merge of the taxon. So the delete of the synonym takes place as it should but the merge is skipped.
Updated by Katja Luther about 3 years ago
- Status changed from New to In Progress
Updated by Andreas Müller almost 3 years ago
- Target version changed from Release 5.19 to Release 5.25
This still seems to be an open issue I guess? And it should have high priority as ObjectNotFoundException should be always avoided.
Updated by Katja Luther almost 3 years ago
- Status changed from In Progress to Resolved
- % Done changed from 0 to 50
Applied in changeset cdmlib|fab7562d10933769c27f26176f401cb92d75e234.
Updated by Andreas Müller almost 3 years ago
- Status changed from Resolved to Closed
- % Done changed from 50 to 100
works as expected
Updated by Andreas Müller almost 3 years ago
- Target version changed from Release 5.25 to Release 5.24