EDIT

ABCD Specimen import via BioCASE provider silently fails

Logged in as user with GAs: Editor + TAXONNODE.[CREATE,READ,UPDATE,DELETE]{Vascular plants of Greece : Bupleurum sec. P. Dimopoulos, Th. Raus, E. Bergmeier, Th. Constantinidis, G. Iatrou, S. Kokkini, A. Strid & D. Tzanoudakis, 2013}

biocase accesspoint: http://ww3.bgbm.org/biocase/pywrapper.cgi?dsa=Herbar

Filter parameters:

• Taxon Name=Bupleurum falcatum*

select all records and import them.

The import stopps at some point with out giving any feedback, afterwards this stacktrace can be found in the log:

!ENTRY org.eclipse.core.jobs 4 0 2019-11-27 16:08:48.259
!MESSAGE This is an unexpected error.
Please contact EDIT Support (EditSupport@bgbm.org) with the error trace below (click on the 'Details' button).
!STACK 0
java.lang.Exception: login :
editor version : 5.11.0
server :  ()
schema version :
os : Linux 5.0.0-36-generic amd64
java : 1.8.0_131
org.springframework.transaction.UnexpectedRollbackException: Transaction rolled back because it has been marked as rollback-only
        at org.springframework.transaction.support.AbstractPlatformTransactionManager.commit(AbstractPlatformTransactionManager.java:724)
        at org.springframework.transaction.interceptor.TransactionAspectSupport.commitTransactionAfterReturning(TransactionAspectSupport.java:485)
        at org.springframework.transaction.interceptor.TransactionAspectSupport.invokeWithinTransaction(TransactionAspectSupport.java:291)
        at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:96)
        at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
        at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:208)
        at com.sun.proxy.$Proxy853.importDataFromStream(Unknown Source)
        at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
        at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
        at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
        at java.lang.reflect.Method.invoke(Method.java:498)
        at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:302)
        at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
        at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
        at org.springframework.remoting.support.RemoteInvocationTraceInterceptor.invoke(RemoteInvocationTraceInterceptor.java:78)
        at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
        at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:208)
        at com.sun.proxy.$Proxy1069.importDataFromStream(Unknown Source)
        at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
        at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
        at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
        at java.lang.reflect.Method.invoke(Method.java:498)
        at org.springframework.remoting.support.RemoteInvocation.invoke(RemoteInvocation.java:212)
        at org.springframework.remoting.support.DefaultRemoteInvocationExecutor.invoke(DefaultRemoteInvocationExecutor.java:39)
        at org.springframework.remoting.support.RemoteInvocationBasedExporter.invoke(RemoteInvocationBasedExporter.java:78)
        at org.springframework.remoting.support.RemoteInvocationBasedExporter.invokeAndCreateResult(RemoteInvocationBasedExporter.java:114)
        at org.springframework.remoting.httpinvoker.HttpInvokerServiceExporter.handleRequest(HttpInvokerServiceExporter.java:74)
        at org.springframework.web.servlet.mvc.HttpRequestHandlerAdapter.handle(HttpRequestHandlerAdapter.java:51)
        at org.springframework.web.servlet.DispatcherServlet.doDispatch(DispatcherServlet.java:959)
        at org.springframework.web.servlet.DispatcherServlet.doService(DispatcherServlet.java:893)
        at org.springframework.web.servlet.FrameworkServlet.processRequest(FrameworkServlet.java:969)
        at org.springframework.web.servlet.FrameworkServlet.doPost(FrameworkServlet.java:871)
        at javax.servlet.http.HttpServlet.service(HttpServlet.java:707)
        at org.springframework.web.servlet.FrameworkServlet.service(FrameworkServlet.java:845)
        at javax.servlet.http.HttpServlet.service(HttpServlet.java:790)
        at org.eclipse.jetty.servlet.ServletHolder.handle(ServletHolder.java:808)
        at org.eclipse.jetty.servlet.ServletHandler$CachedChain.doFilter(ServletHandler.java:1669)
        at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:316)
        at org.springframework.security.web.access.intercept.FilterSecurityInterceptor.invoke(FilterSecurityInterceptor.java:126)
        at org.springframework.security.web.access.intercept.FilterSecurityInterceptor.doFilter(FilterSecurityInterceptor.java:90)
        at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:330)
        at org.springframework.security.web.access.ExceptionTranslationFilter.doFilter(ExceptionTranslationFilter.java:114)
        at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:330)
        at org.springframework.security.web.session.SessionManagementFilter.doFilter(SessionManagementFilter.java:122)
        at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:330)
        at org.springframework.security.web.servletapi.SecurityContextHolderAwareRequestFilter.doFilter(SecurityContextHolderAwareRequestFilter.java:169)
        at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:330)
        at org.springframework.security.web.savedrequest.RequestCacheAwareFilter.doFilter(RequestCacheAwareFilter.java:48)
        at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:330)
        at org.springframework.security.web.authentication.www.BasicAuthenticationFilter.doFilterInternal(BasicAuthenticationFilter.java:213)
        at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107)
        at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:330)
        at org.springframework.security.web.authentication.logout.LogoutFilter.doFilter(LogoutFilter.java:120)
        at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:330)
        at org.springframework.security.web.header.HeaderWriterFilter.doFilterInternal(HeaderWriterFilter.java:64)
        at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107)
        at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:330)
        at org.springframework.security.web.context.SecurityContextPersistenceFilter.doFilter(SecurityContextPersistenceFilter.java:91)
        at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:330)
        at org.springframework.security.web.context.request.async.WebAsyncManagerIntegrationFilter.doFilterInternal(WebAsyncManagerIntegrationFilter.java:53)
        at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107)
        at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:330)
        at org.springframework.security.web.FilterChainProxy.doFilterInternal(FilterChainProxy.java:213)
        at org.eclipse.core.databinding.observable.Realm.runWithDefault(Realm.java:336)
        at org.eclipse.ui.internal.Workbench.createAndRunWorkbench(Workbench.java:610)
        at org.eclipse.ui.PlatformUI.createAndRunWorkbench(PlatformUI.java:148)
        at eu.etaxonomy.taxeditor.Application.start(Application.java:24)
        at org.eclipse.equinox.internal.app.EclipseAppHandle.run(EclipseAppHandle.java:196)
        at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.runApplication(EclipseAppLauncher.java:134)
        at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.start(EclipseAppLauncher.java:104)
        at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:388)
        at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:243)
        at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
        at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
        at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
        at java.lang.reflect.Method.invoke(Method.java:498)
        at org.eclipse.equinox.launcher.Main.invokeFramework(Main.java:673)
        at org.eclipse.equinox.launcher.Main.basicRun(Main.java:610)
        at org.eclipse.equinox.launcher.Main.run(Main.java:1519)
        at org.eclipse.equinox.launcher.Main.main(Main.java:1492)