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bug #6281

closed

delete synonym with annotations throws exception

Added by Katja Luther over 7 years ago. Updated almost 7 years ago.

Status:
Closed
Priority:
Highest
Assignee:
Category:
cdmlib
Target version:
Start date:
Due date:
% Done:

0%

Estimated time:
Severity:
critical
Found in Version:

Description

Das Löschen von Synonymen geht zwar letztlich, aber es kommt immer zuerst eine Fehlermeldung (s.u.).
Nur wenn man diese hartnäckig mit OK ignoriert, dann das Taxon schließt und wieder neu läd, sieht man, dass er das Löschen vollzogen hat.

Beste Grüße,
Norbert

login : ki
editor version : 4.4.0
server : api.cybertaxonomy.org / cybertaxonomy.org
schema version : 4.1.0.0.201607300000
os : Windows 7 6.1 amd64
java : 1.8.0_111
org.eclipse.core.commands.ExecutionException: While executing the operation, an exception occurred
                at org.eclipse.core.commands.operations.DefaultOperationHistory.execute(DefaultOperationHistory.java:521)
                at eu.etaxonomy.taxeditor.model.AbstractUtility$1.run(AbstractUtility.java:346)
                at org.eclipse.jface.operation.ModalContext.runInCurrentThread(ModalContext.java:464)
                at org.eclipse.jface.operation.ModalContext.run(ModalContext.java:372)
                at org.eclipse.jface.window.ApplicationWindow$1.run(ApplicationWindow.java:759)
                at org.eclipse.swt.custom.BusyIndicator.showWhile(BusyIndicator.java:70)
                at org.eclipse.jface.window.ApplicationWindow.run(ApplicationWindow.java:756)
                at org.eclipse.ui.internal.WorkbenchWindow.run(WorkbenchWindow.java:2649)
                at org.eclipse.ui.internal.progress.ProgressManager$RunnableWithStatus.run(ProgressManager.java:1346)
                at org.eclipse.swt.custom.BusyIndicator.showWhile(BusyIndicator.java:70)
                at org.eclipse.ui.internal.progress.ProgressManager$7.run(ProgressManager.java:1184)
                at org.eclipse.swt.widgets.Synchronizer.syncExec(Synchronizer.java:180)
                at org.eclipse.ui.internal.UISynchronizer.syncExec(UISynchronizer.java:150)
                at org.eclipse.swt.widgets.Display.syncExec(Display.java:4683)
                at org.eclipse.ui.internal.progress.ProgressManager.runInUI(ProgressManager.java:1182)
                at eu.etaxonomy.taxeditor.model.AbstractUtility.runInUI(AbstractUtility.java:658)
                at eu.etaxonomy.taxeditor.model.AbstractUtility.executeOperation(AbstractUtility.java:364)
                at eu.etaxonomy.taxeditor.editor.name.handler.DeleteTaxonBaseHandler.doExecute(DeleteTaxonBaseHandler.java:87)
                at eu.etaxonomy.taxeditor.editor.name.handler.DeleteTaxonBaseHandler.execute(DeleteTaxonBaseHandler.java:55)
                at org.eclipse.ui.internal.handlers.HandlerProxy.execute(HandlerProxy.java:293)
                at org.eclipse.core.commands.Command.executeWithChecks(Command.java:476)
                at org.eclipse.core.commands.ParameterizedCommand.executeWithChecks(ParameterizedCommand.java:508)
                at org.eclipse.ui.internal.handlers.HandlerService.executeCommand(HandlerService.java:169)
                at org.eclipse.ui.internal.handlers.SlaveHandlerService.executeCommand(SlaveHandlerService.java:241)
                at org.eclipse.ui.internal.handlers.SlaveHandlerService.executeCommand(SlaveHandlerService.java:241)
                at org.eclipse.ui.internal.handlers.SlaveHandlerService.executeCommand(SlaveHandlerService.java:241)
                at org.eclipse.ui.menus.CommandContributionItem.handleWidgetSelection(CommandContributionItem.java:829)
                at org.eclipse.ui.menus.CommandContributionItem.access$19(CommandContributionItem.java:815)
                at org.eclipse.ui.menus.CommandContributionItem$5.handleEvent(CommandContributionItem.java:805)
                at org.eclipse.swt.widgets.EventTable.sendEvent(EventTable.java:84)
                at org.eclipse.swt.widgets.Widget.sendEvent(Widget.java:1053)
                at org.eclipse.swt.widgets.Display.runDeferredEvents(Display.java:4165)
                at org.eclipse.swt.widgets.Display.readAndDispatch(Display.java:3754)
                at org.eclipse.ui.internal.Workbench.runEventLoop(Workbench.java:2701)
                at org.eclipse.ui.internal.Workbench.runUI(Workbench.java:2665)
                at org.eclipse.ui.internal.Workbench.access$4(Workbench.java:2499)
                at org.eclipse.ui.internal.Workbench$7.run(Workbench.java:679)
                at org.eclipse.core.databinding.observable.Realm.runWithDefault(Realm.java:332)
                at org.eclipse.ui.internal.Workbench.createAndRunWorkbench(Workbench.java:668)
                at org.eclipse.ui.PlatformUI.createAndRunWorkbench(PlatformUI.java:149)
                at eu.etaxonomy.taxeditor.Application.start(Application.java:24)
                at org.eclipse.equinox.internal.app.EclipseAppHandle.run(EclipseAppHandle.java:196)
                at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.runApplication(EclipseAppLauncher.java:110)
                at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.start(EclipseAppLauncher.java:79)
                at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:344)
                at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:179)
                at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
                at sun.reflect.NativeMethodAccessorImpl.invoke(Unknown Source)
                at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)
                at java.lang.reflect.Method.invoke(Unknown Source)
                at org.eclipse.equinox.launcher.Main.invokeFramework(Main.java:622)
                at org.eclipse.equinox.launcher.Main.basicRun(Main.java:577)
                at org.eclipse.equinox.launcher.Main.run(Main.java:1410)
Caused by: org.hibernate.AssertionFailure: collection owner not associated with session: eu.etaxonomy.cdm.model.common.OriginalSourceBase.annotations
                at org.hibernate.engine.internal.Collections.processDereferencedCollection(Collections.java:91)
                at org.hibernate.engine.internal.Collections.processUnreachableCollection(Collections.java:50)
                at org.hibernate.event.internal.AbstractFlushingEventListener.flushCollections(AbstractFlushingEventListener.java:243)
                at org.hibernate.event.internal.AbstractFlushingEventListener.flushEverythingToExecutions(AbstractFlushingEventListener.java:86)
                at org.hibernate.event.internal.DefaultFlushEventListener.onFlush(DefaultFlushEventListener.java:38)
                at org.hibernate.internal.SessionImpl.flush(SessionImpl.java:1282)
                at org.hibernate.internal.SessionImpl.managedFlush(SessionImpl.java:465)
                at org.hibernate.internal.SessionImpl.flushBeforeTransactionCompletion(SessionImpl.java:2963)
                at org.hibernate.internal.SessionImpl.beforeTransactionCompletion(SessionImpl.java:2339)
                at org.hibernate.engine.jdbc.internal.JdbcCoordinatorImpl.beforeTransactionCompletion(JdbcCoordinatorImpl.java:485)
                at org.hibernate.resource.transaction.backend.jdbc.internal.JdbcResourceLocalTransactionCoordinatorImpl.beforeCompletionCallback(JdbcResourceLocalTransactionCoordinatorImpl.java:147)
                at org.hibernate.resource.transaction.backend.jdbc.internal.JdbcResourceLocalTransactionCoordinatorImpl.access$100(JdbcResourceLocalTransactionCoordinatorImpl.java:38)
                at org.hibernate.resource.transaction.backend.jdbc.internal.JdbcResourceLocalTransactionCoordinatorImpl$TransactionDriverControlImpl.commit(JdbcResourceLocalTransactionCoordinatorImpl.java:231)
                at org.hibernate.engine.transaction.internal.TransactionImpl.commit(TransactionImpl.java:65)
                at org.springframework.orm.hibernate5.HibernateTransactionManager.doCommit(HibernateTransactionManager.java:581)
                at org.springframework.transaction.support.AbstractPlatformTransactionManager.processCommit(AbstractPlatformTransactionManager.java:761)
                at org.springframework.transaction.support.AbstractPlatformTransactionManager.commit(AbstractPlatformTransactionManager.java:730)
                at org.springframework.transaction.interceptor.TransactionAspectSupport.commitTransactionAfterReturning(TransactionAspectSupport.java:485)
                at org.springframework.transaction.interceptor.TransactionAspectSupport.invokeWithinTransaction(TransactionAspectSupport.java:291)
                at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:96)
                at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
                at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:208)
                at com.sun.proxy.$Proxy606.deleteSynonym(Unknown Source)
                at sun.reflect.GeneratedMethodAccessor37609.invoke(Unknown Source)
                at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
                at java.lang.reflect.Method.invoke(Method.java:498)
                at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:302)
                at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
                at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
                at org.springframework.remoting.support.RemoteInvocationTraceInterceptor.invoke(RemoteInvocationTraceInterceptor.java:78)
                at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
                at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:208)
                at com.sun.proxy.$Proxy908.deleteSynonym(Unknown Source)
                at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
                at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
                at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
                at java.lang.reflect.Method.invoke(Method.java:498)
                at org.springframework.remoting.support.RemoteInvocation.invoke(RemoteInvocation.java:212)
                at org.springframework.remoting.support.DefaultRemoteInvocationExecutor.invoke(DefaultRemoteInvocationExecutor.java:39)
                at org.springframework.remoting.support.RemoteInvocationBasedExporter.invoke(RemoteInvocationBasedExporter.java:78)
                at org.springframework.remoting.support.RemoteInvocationBasedExporter.invokeAndCreateResult(RemoteInvocationBasedExporter.java:114)
                at org.springframework.remoting.httpinvoker.HttpInvokerServiceExporter.handleRequest(HttpInvokerServiceExporter.java:74)
                at org.springframework.web.servlet.mvc.HttpRequestHandlerAdapter.handle(HttpRequestHandlerAdapter.java:51)
                at org.springframework.web.servlet.DispatcherServlet.doDispatch(DispatcherServlet.java:959)
                at org.springframework.web.servlet.DispatcherServlet.doService(DispatcherServlet.java:893)
                at org.springframework.web.servlet.FrameworkServlet.processRequest(FrameworkServlet.java:969)
                at org.springframework.web.servlet.FrameworkServlet.doPost(FrameworkServlet.java:871)
                at javax.servlet.http.HttpServlet.service(HttpServlet.java:707)
                at org.springframework.web.servlet.FrameworkServlet.service(FrameworkServlet.java:845)
                at javax.servlet.http.HttpServlet.service(HttpServlet.java:790)
                at org.eclipse.jetty.servlet.ServletHolder.handle(ServletHolder.java:808)
                at org.eclipse.jetty.servlet.ServletHandler$CachedChain.doFilter(ServletHandler.java:1669)
                at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:316)
                at org.springframework.security.web.access.intercept.FilterSecurityInterceptor.invoke(FilterSecurityInterceptor.java:126)
                at org.springframework.security.web.access.intercept.FilterSecurityInterceptor.doFilter(FilterSecurityInterceptor.java:90)
                at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:330)
                at org.springframework.security.web.access.ExceptionTranslationFilter.doFilter(ExceptionTranslationFilter.java:114)
                at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:330)
                at org.springframework.security.web.session.SessionManagementFilter.doFilter(SessionManagementFilter.java:122)
                at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:330)
                at org.springframework.security.web.servletapi.SecurityContextHolderAwareRequestFilter.doFilter(SecurityContextHolderAwareRequestFilter.java:169)
                at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:330)
                at org.springframework.security.web.savedrequest.RequestCacheAwareFilter.doFilter(RequestCacheAwareFilter.java:48)
                at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:330)
                at org.springframework.security.web.authentication.www.BasicAuthenticationFilter.doFilterInternal(BasicAuthenticationFilter.java:213)
                at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107)
                at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:330)
                at org.springframework.security.web.authentication.logout.LogoutFilter.doFilter(LogoutFilter.java:120)
                at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:330)
                at org.springframework.security.web.header.HeaderWriterFilter.doFilterInternal(HeaderWriterFilter.java:64)
                at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107)
                at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:330)
                at org.springframework.security.web.context.SecurityContextPersistenceFilter.doFilter(SecurityContextPersistenceFilter.java:91)
                at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:330)
                at org.springframework.security.web.context.request.async.WebAsyncManagerIntegrationFilter.doFilterInternal(WebAsyncManagerIntegrationFilter.java:53)
                at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107)
                at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:330)
                at org.springframework.security.web.FilterChainProxy.doFilterInternal(FilterChainProxy.java:213)
                at org.springframework.security.web.FilterChainProxy.doFilter(FilterChainProxy.java:176)
                at org.springframework.web.filter.DelegatingFilterProxy.invokeDelegate(DelegatingFilterProxy.java:346)
                at org.springframework.web.filter.DelegatingFilterProxy.doFilter(DelegatingFilterProxy.java:262)
                at org.eclipse.jetty.servlet.ServletHandler$CachedChain.doFilter(ServletHandler.java:1652)
                at org.springframework.web.filter.CharacterEncodingFilter.doFilterInternal(CharacterEncodingFilter.java:121)
                at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107)
                at org.eclipse.jetty.servlet.ServletHandler$CachedChain.doFilter(ServletHandler.java:1652)
                at org.eclipse.jetty.servlet.ServletHandler.doHandle(ServletHandler.java:585)
                at org.eclipse.jetty.server.handler.ScopedHandler.handle(ScopedHandler.java:143)
                at org.eclipse.jetty.security.SecurityHandler.handle(SecurityHandler.java:577)
                at org.eclipse.jetty.server.session.SessionHandler.doHandle(SessionHandler.java:223)
                at org.eclipse.jetty.server.handler.ContextHandler.doHandle(ContextHandler.java:1127)
                at org.eclipse.jetty.servlet.ServletHandler.doScope(ServletHandler.java:515)
                at org.eclipse.jetty.server.session.SessionHandler.doScope(SessionHandler.java:185)
                at org.eclipse.jetty.server.handler.ContextHandler.doScope(ContextHandler.java:1061)
                at org.eclipse.jetty.server.handler.ScopedHandler.handle(ScopedHandler.java:141)
                at org.eclipse.jetty.server.handler.ContextHandlerCollection.handle(ContextHandlerCollection.java:215)
                at org.eclipse.jetty.server.handler.HandlerWrapper.handle(HandlerWrapper.java:97)
                at org.eclipse.jetty.server.Server.handle(Server.java:497)
                at org.eclipse.jetty.server.HttpChannel.handle(HttpChannel.java:310)
                at org.eclipse.jetty.server.HttpConnection.onFillable(HttpConnection.java:257)
                at org.eclipse.jetty.io.AbstractConnection$2.run(AbstractConnection.java:540)
                at org.eclipse.jetty.util.thread.QueuedThreadPool.runJob(QueuedThreadPool.java:635)
                at org.eclipse.jetty.util.thread.QueuedThreadPool$3.run(QueuedThreadPool.java:555)
                at java.lang.Thread.run(Thread.java:745)
                at org.springframework.remoting.support.RemoteInvocationUtils.fillInClientStackTraceIfPossible(RemoteInvocationUtils.java:45)
                at org.springframework.remoting.support.RemoteInvocationResult.recreate(RemoteInvocationResult.java:149)
                at org.springframework.remoting.support.RemoteInvocationBasedAccessor.recreateRemoteInvocationResult(RemoteInvocationBasedAccessor.java:85)
                at org.springframework.remoting.httpinvoker.HttpInvokerClientInterceptor.invoke(HttpInvokerClientInterceptor.java:150)
                at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
                at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:208)
                at com.sun.proxy.$Proxy36.deleteSynonym(Unknown Source)
                at eu.etaxonomy.taxeditor.editor.name.operation.DeleteSynonymOperation.execute(DeleteSynonymOperation.java:78)
                at org.eclipse.core.commands.operations.DefaultOperationHistory.execute(DefaultOperationHistory.java:513)
                ... 52 more
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