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bug #6178

TOE Exception when creating a new Reference

Added by Andreas Müller almost 3 years ago. Updated almost 3 years ago.

Status:
Duplicate
Priority:
Highest
Assignee:
Category:
taxeditor
Target version:
-
Start date:
11/02/2016
Due date:
% Done:

0%

Severity:
blocker
Found in Version:

Description

I tried to add a new nomencl. reference via "Create a new Reference in Reference selection dialog.
This caused the following exception. To me it looks like following 2 lines are the critical ones:

at com.sun.proxy.$Proxy11.getReferencingObjectsCount(Unknown Source)
at eu.etaxonomy.taxeditor.ui.section.reference.ReferenceDetailElement.setWarnForReferencingObjects(ReferenceDetailElement.java:611)

This is probably a regression introduced with checking on related objects within dialogs. This should not take place for new objects at all, as they can not be related per se.

login : admin
editor version : 4.4.0.201611012350
server : test.e-taxonomy.eu / edit-test
schema version : 4.0.0.0.201604200000
os : Windows Server 2012 6.2 amd64
java : 1.7.0_65
java.lang.RuntimeException: org.hibernate.TransientObjectException: object references an unsaved transient instance - save the transient instance before flushing: eu.etaxonomy.cdm.model.reference.Reference
    at eu.etaxonomy.cdm.persistence.dao.hibernate.common.CdmGenericDaoImpl.getReferencingObjects(CdmGenericDaoImpl.java:195)
    at eu.etaxonomy.cdm.api.service.CommonServiceImpl.getReferencingObjectsCount(CommonServiceImpl.java:109)
    at sun.reflect.GeneratedMethodAccessor1892.invoke(Unknown Source)
    at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
    at java.lang.reflect.Method.invoke(Method.java:497)
    at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:302)
    at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
    at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
    at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:110)
    at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
    at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:208)
    at com.sun.proxy.$Proxy554.getReferencingObjectsCount(Unknown Source)
    at sun.reflect.GeneratedMethodAccessor1892.invoke(Unknown Source)
    at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
    at java.lang.reflect.Method.invoke(Method.java:497)
    at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:302)
    at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
    at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
    at org.springframework.remoting.support.RemoteInvocationTraceInterceptor.invoke(RemoteInvocationTraceInterceptor.java:78)
    at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
    at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:208)
    at com.sun.proxy.$Proxy848.getReferencingObjectsCount(Unknown Source)
    at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
    at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
    at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
    at java.lang.reflect.Method.invoke(Method.java:497)
    at org.springframework.remoting.support.RemoteInvocation.invoke(RemoteInvocation.java:212)
    at org.springframework.remoting.support.DefaultRemoteInvocationExecutor.invoke(DefaultRemoteInvocationExecutor.java:39)
    at org.springframework.remoting.support.RemoteInvocationBasedExporter.invoke(RemoteInvocationBasedExporter.java:78)
    at org.springframework.remoting.support.RemoteInvocationBasedExporter.invokeAndCreateResult(RemoteInvocationBasedExporter.java:114)
    at org.springframework.remoting.httpinvoker.HttpInvokerServiceExporter.handleRequest(HttpInvokerServiceExporter.java:74)
    at org.springframework.web.servlet.mvc.HttpRequestHandlerAdapter.handle(HttpRequestHandlerAdapter.java:51)
    at org.springframework.web.servlet.DispatcherServlet.doDispatch(DispatcherServlet.java:959)
    at org.springframework.web.servlet.DispatcherServlet.doService(DispatcherServlet.java:893)
    at org.springframework.web.servlet.FrameworkServlet.processRequest(FrameworkServlet.java:969)
    at org.springframework.web.servlet.FrameworkServlet.doPost(FrameworkServlet.java:871)
    at javax.servlet.http.HttpServlet.service(HttpServlet.java:707)
    at org.springframework.web.servlet.FrameworkServlet.service(FrameworkServlet.java:845)
    at javax.servlet.http.HttpServlet.service(HttpServlet.java:790)
    at org.eclipse.jetty.servlet.ServletHolder.handle(ServletHolder.java:808)
    at org.eclipse.jetty.servlet.ServletHandler$CachedChain.doFilter(ServletHandler.java:1669)
    at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:316)
    at org.springframework.security.web.access.intercept.FilterSecurityInterceptor.invoke(FilterSecurityInterceptor.java:126)
    at org.springframework.security.web.access.intercept.FilterSecurityInterceptor.doFilter(FilterSecurityInterceptor.java:90)
    at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:330)
    at org.springframework.security.web.access.ExceptionTranslationFilter.doFilter(ExceptionTranslationFilter.java:114)
    at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:330)
    at org.springframework.security.web.session.SessionManagementFilter.doFilter(SessionManagementFilter.java:122)
    at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:330)
    at org.springframework.security.web.servletapi.SecurityContextHolderAwareRequestFilter.doFilter(SecurityContextHolderAwareRequestFilter.java:169)
    at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:330)
    at org.springframework.security.web.savedrequest.RequestCacheAwareFilter.doFilter(RequestCacheAwareFilter.java:48)
    at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:330)
    at org.springframework.security.web.authentication.www.BasicAuthenticationFilter.doFilterInternal(BasicAuthenticationFilter.java:213)
    at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107)
    at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:330)
    at org.springframework.security.web.authentication.logout.LogoutFilter.doFilter(LogoutFilter.java:120)
    at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:330)
    at org.springframework.security.web.header.HeaderWriterFilter.doFilterInternal(HeaderWriterFilter.java:64)
    at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107)
    at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:330)
    at org.springframework.security.web.context.SecurityContextPersistenceFilter.doFilter(SecurityContextPersistenceFilter.java:91)
    at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:330)
    at org.springframework.security.web.context.request.async.WebAsyncManagerIntegrationFilter.doFilterInternal(WebAsyncManagerIntegrationFilter.java:53)
    at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107)
    at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:330)
    at org.springframework.security.web.FilterChainProxy.doFilterInternal(FilterChainProxy.java:213)
    at org.springframework.security.web.FilterChainProxy.doFilter(FilterChainProxy.java:176)
    at org.springframework.web.filter.DelegatingFilterProxy.invokeDelegate(DelegatingFilterProxy.java:346)
    at org.springframework.web.filter.DelegatingFilterProxy.doFilter(DelegatingFilterProxy.java:262)
    at org.eclipse.jetty.servlet.ServletHandler$CachedChain.doFilter(ServletHandler.java:1652)
    at org.springframework.web.filter.CharacterEncodingFilter.doFilterInternal(CharacterEncodingFilter.java:121)
    at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107)
    at org.eclipse.jetty.servlet.ServletHandler$CachedChain.doFilter(ServletHandler.java:1652)
    at org.eclipse.jetty.servlet.ServletHandler.doHandle(ServletHandler.java:585)
    at org.eclipse.jetty.server.handler.ScopedHandler.handle(ScopedHandler.java:143)
    at org.eclipse.jetty.security.SecurityHandler.handle(SecurityHandler.java:577)
    at org.eclipse.jetty.server.session.SessionHandler.doHandle(SessionHandler.java:223)
    at org.eclipse.jetty.server.handler.ContextHandler.doHandle(ContextHandler.java:1127)
    at org.eclipse.jetty.servlet.ServletHandler.doScope(ServletHandler.java:515)
    at org.eclipse.jetty.server.session.SessionHandler.doScope(SessionHandler.java:185)
    at org.eclipse.jetty.server.handler.ContextHandler.doScope(ContextHandler.java:1061)
    at org.eclipse.jetty.server.handler.ScopedHandler.handle(ScopedHandler.java:141)
    at org.eclipse.jetty.server.handler.ContextHandlerCollection.handle(ContextHandlerCollection.java:215)
    at org.eclipse.jetty.server.handler.HandlerWrapper.handle(HandlerWrapper.java:97)
    at org.eclipse.jetty.server.Server.handle(Server.java:497)
    at org.eclipse.jetty.server.HttpChannel.handle(HttpChannel.java:310)
    at org.eclipse.jetty.server.HttpConnection.onFillable(HttpConnection.java:257)
    at org.eclipse.jetty.io.AbstractConnection$2.run(AbstractConnection.java:540)
    at org.eclipse.jetty.util.thread.QueuedThreadPool.runJob(QueuedThreadPool.java:635)
    at org.eclipse.jetty.util.thread.QueuedThreadPool$3.run(QueuedThreadPool.java:555)
    at java.lang.Thread.run(Thread.java:745)
    at org.springframework.remoting.support.RemoteInvocationUtils.fillInClientStackTraceIfPossible(RemoteInvocationUtils.java:45)
    at org.springframework.remoting.support.RemoteInvocationResult.recreate(RemoteInvocationResult.java:149)
    at org.springframework.remoting.support.RemoteInvocationBasedAccessor.recreateRemoteInvocationResult(RemoteInvocationBasedAccessor.java:85)
    at org.springframework.remoting.httpinvoker.HttpInvokerClientInterceptor.invoke(HttpInvokerClientInterceptor.java:150)
    at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
    at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:208)
    at com.sun.proxy.$Proxy11.getReferencingObjectsCount(Unknown Source)
    at eu.etaxonomy.taxeditor.ui.section.reference.ReferenceDetailElement.setWarnForReferencingObjects(ReferenceDetailElement.java:611)
    at eu.etaxonomy.taxeditor.ui.section.reference.ReferenceDetailElement.createControls(ReferenceDetailElement.java:120)
    at eu.etaxonomy.taxeditor.ui.section.reference.ReferenceDetailElement.createControls(ReferenceDetailElement.java:1)
    at eu.etaxonomy.taxeditor.ui.section.AbstractCdmDetailElement.updateContent(AbstractCdmDetailElement.java:102)
    at eu.etaxonomy.taxeditor.ui.section.reference.ReferenceDetailElement.updateContent(ReferenceDetailElement.java:200)
    at eu.etaxonomy.taxeditor.ui.section.AbstractCdmDetailElement.setEntity(AbstractCdmDetailElement.java:89)
    at eu.etaxonomy.taxeditor.ui.section.reference.ReferenceWizardPage.createElement(ReferenceWizardPage.java:58)
    at eu.etaxonomy.taxeditor.ui.element.AbstractCdmEntityWizardPage.createControl(AbstractCdmEntityWizardPage.java:108)
    at org.eclipse.jface.wizard.Wizard.createPageControls(Wizard.java:174)
    at org.eclipse.jface.wizard.WizardDialog.createPageControls(WizardDialog.java:736)
    at org.eclipse.jface.wizard.WizardDialog.createContents(WizardDialog.java:608)
    at org.eclipse.jface.window.Window.create(Window.java:431)
    at org.eclipse.jface.dialogs.Dialog.create(Dialog.java:1089)
    at org.eclipse.jface.window.Window.open(Window.java:790)
    at eu.etaxonomy.taxeditor.ui.dialog.selection.AbstractFilteredCdmResourceSelectionDialog$3.widgetSelected(AbstractFilteredCdmResourceSelectionDialog.java:487)
    at org.eclipse.swt.widgets.TypedListener.handleEvent(TypedListener.java:240)
    at org.eclipse.swt.widgets.EventTable.sendEvent(EventTable.java:84)
    at org.eclipse.swt.widgets.Widget.sendEvent(Widget.java:1053)
    at org.eclipse.swt.widgets.Widget.sendEvent(Widget.java:1077)
    at org.eclipse.swt.widgets.Widget.sendSelectionEvent(Widget.java:1094)
    at org.eclipse.swt.widgets.Link.wmNotifyChild(Link.java:1071)
    at org.eclipse.swt.widgets.Control.wmNotify(Control.java:5534)
    at org.eclipse.swt.widgets.Composite.wmNotify(Composite.java:1896)
    at org.eclipse.swt.widgets.Control.WM_NOTIFY(Control.java:5086)
    at org.eclipse.swt.widgets.Control.windowProc(Control.java:4584)
    at org.eclipse.swt.widgets.Display.windowProc(Display.java:4985)
    at org.eclipse.swt.internal.win32.OS.CallWindowProcW(Native Method)
    at org.eclipse.swt.internal.win32.OS.CallWindowProc(OS.java:2425)
    at org.eclipse.swt.widgets.Link.callWindowProc(Link.java:172)
    at org.eclipse.swt.widgets.Widget.wmLButtonUp(Widget.java:2057)
    at org.eclipse.swt.widgets.Control.WM_LBUTTONUP(Control.java:4912)
    at org.eclipse.swt.widgets.Link.WM_LBUTTONUP(Link.java:909)
    at org.eclipse.swt.widgets.Control.windowProc(Control.java:4565)
    at org.eclipse.swt.widgets.Display.windowProc(Display.java:4985)
    at org.eclipse.swt.internal.win32.OS.DispatchMessageW(Native Method)
    at org.eclipse.swt.internal.win32.OS.DispatchMessage(OS.java:2531)
    at org.eclipse.swt.widgets.Display.readAndDispatch(Display.java:3752)
    at org.eclipse.jface.window.Window.runEventLoop(Window.java:825)
    at org.eclipse.jface.window.Window.open(Window.java:801)
    at eu.etaxonomy.taxeditor.ui.dialog.selection.AbstractFilteredCdmResourceSelectionDialog.getSelectionFromDialog(AbstractFilteredCdmResourceSelectionDialog.java:148)
    at eu.etaxonomy.taxeditor.ui.dialog.selection.NomenclaturalReferenceSelectionDialog.select(NomenclaturalReferenceSelectionDialog.java:89)
    at eu.etaxonomy.taxeditor.ui.dialog.selection.SelectionDialogFactory.getSelectionFromDialog(SelectionDialogFactory.java:80)
    at eu.etaxonomy.taxeditor.ui.selection.EntitySelectionElement.widgetSelected(EntitySelectionElement.java:223)
    at org.eclipse.swt.widgets.TypedListener.handleEvent(TypedListener.java:240)
    at org.eclipse.swt.widgets.EventTable.sendEvent(EventTable.java:84)
    at org.eclipse.swt.widgets.Widget.sendEvent(Widget.java:1053)
    at org.eclipse.swt.widgets.Display.runDeferredEvents(Display.java:4165)
    at org.eclipse.swt.widgets.Display.readAndDispatch(Display.java:3754)
    at org.eclipse.ui.internal.Workbench.runEventLoop(Workbench.java:2701)
    at org.eclipse.ui.internal.Workbench.runUI(Workbench.java:2665)
    at org.eclipse.ui.internal.Workbench.access$4(Workbench.java:2499)
    at org.eclipse.ui.internal.Workbench$7.run(Workbench.java:679)
    at org.eclipse.core.databinding.observable.Realm.runWithDefault(Realm.java:332)
    at org.eclipse.ui.internal.Workbench.createAndRunWorkbench(Workbench.java:668)
    at org.eclipse.ui.PlatformUI.createAndRunWorkbench(PlatformUI.java:149)
    at eu.etaxonomy.taxeditor.Application.start(Application.java:24)
    at org.eclipse.equinox.internal.app.EclipseAppHandle.run(EclipseAppHandle.java:196)
    at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.runApplication(EclipseAppLauncher.java:110)
    at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.start(EclipseAppLauncher.java:79)
    at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:344)
    at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:179)
    at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
    at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
    at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
    at java.lang.reflect.Method.invoke(Method.java:606)
    at org.eclipse.equinox.launcher.Main.invokeFramework(Main.java:622)
    at org.eclipse.equinox.launcher.Main.basicRun(Main.java:577)
    at org.eclipse.equinox.launcher.Main.run(Main.java:1410)
Caused by: org.hibernate.TransientObjectException: object references an unsaved transient instance - save the transient instance before flushing: eu.etaxonomy.cdm.model.reference.Reference
    at org.hibernate.engine.internal.ForeignKeys.getEntityIdentifierIfNotUnsaved(ForeignKeys.java:279)
    at org.hibernate.type.EntityType.getIdentifier(EntityType.java:455)
    at org.hibernate.type.ManyToOneType.nullSafeSet(ManyToOneType.java:153)
    at org.hibernate.param.NamedParameterSpecification.bind(NamedParameterSpecification.java:52)
    at org.hibernate.loader.hql.QueryLoader.bindParameterValues(QueryLoader.java:627)
    at org.hibernate.loader.Loader.prepareQueryStatement(Loader.java:1944)
    at org.hibernate.loader.Loader.executeQueryStatement(Loader.java:1897)
    at org.hibernate.loader.Loader.executeQueryStatement(Loader.java:1875)
    at org.hibernate.loader.Loader.doQuery(Loader.java:919)
    at org.hibernate.loader.Loader.doQueryAndInitializeNonLazyCollections(Loader.java:336)
    at org.hibernate.loader.Loader.doList(Loader.java:2611)
    at org.hibernate.loader.Loader.doList(Loader.java:2594)
    at org.hibernate.loader.Loader.listIgnoreQueryCache(Loader.java:2423)
    at org.hibernate.loader.Loader.list(Loader.java:2418)
    at org.hibernate.loader.hql.QueryLoader.list(QueryLoader.java:501)
    at org.hibernate.hql.internal.ast.QueryTranslatorImpl.list(QueryTranslatorImpl.java:371)
    at org.hibernate.engine.query.spi.HQLQueryPlan.performList(HQLQueryPlan.java:216)
    at org.hibernate.internal.SessionImpl.list(SessionImpl.java:1326)
    at org.hibernate.internal.QueryImpl.list(QueryImpl.java:87)
    at eu.etaxonomy.cdm.persistence.dao.hibernate.common.CdmGenericDaoImpl.getCdmBasesWithItemInCollection(CdmGenericDaoImpl.java:134)
    at eu.etaxonomy.cdm.persistence.dao.hibernate.common.CdmGenericDaoImpl.handleReferenceHolder(CdmGenericDaoImpl.java:269)
    at eu.etaxonomy.cdm.persistence.dao.hibernate.common.CdmGenericDaoImpl.getReferencingObjects(CdmGenericDaoImpl.java:190)
    ... 166 more

Related issues

Related to Edit - bug #6176: Creating a new Reference throws TOE (TransientObjectException) Closed 11/02/2016 11/09/2016
Related to Edit - feature request #5972: Prevent user from unwanted author and reference updates Feedback 07/08/2016

History

#1 Updated by Andreas Müller almost 3 years ago

  • Priority changed from New to Highest
  • Severity changed from normal to blocker

#2 Updated by Andreas Müller almost 3 years ago

  • Blocks bug #6129: After creating a new Reference in selection dialog, it could not be found in the selection dialog added

#3 Updated by Andreas Müller almost 3 years ago

  • Related to bug #6176: Creating a new Reference throws TOE (TransientObjectException) added

#4 Updated by Andreas Müller almost 3 years ago

This issue is very similar to #6176 (but not exactly a duplicate I guess)

#5 Updated by Andreas Müller almost 3 years ago

  • Status changed from New to Duplicate
  • Target version deleted (Release 4.4)

Looks like this was fixed together with #6178. As it was only a temporary regression within v4.4 snapshot I remove the target version.

#6 Updated by Andreas Müller almost 3 years ago

  • Blocks deleted (bug #6129: After creating a new Reference in selection dialog, it could not be found in the selection dialog)

#7 Updated by Andreas Müller almost 3 years ago

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