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bug #6178
closedTOE Exception when creating a new Reference
Start date:
Due date:
% Done:
0%
Estimated time:
Severity:
blocker
Found in Version:
Description
I tried to add a new nomencl. reference via "Create a new Reference in Reference selection dialog.
This caused the following exception. To me it looks like following 2 lines are the critical ones:
at com.sun.proxy.$Proxy11.getReferencingObjectsCount(Unknown Source) at eu.etaxonomy.taxeditor.ui.section.reference.ReferenceDetailElement.setWarnForReferencingObjects(ReferenceDetailElement.java:611)
This is probably a regression introduced with checking on related objects within dialogs. This should not take place for new objects at all, as they can not be related per se.
login : admin editor version : 4.4.0.201611012350 server : test.e-taxonomy.eu / edit-test schema version : 4.0.0.0.201604200000 os : Windows Server 2012 6.2 amd64 java : 1.7.0_65 java.lang.RuntimeException: org.hibernate.TransientObjectException: object references an unsaved transient instance - save the transient instance before flushing: eu.etaxonomy.cdm.model.reference.Reference at eu.etaxonomy.cdm.persistence.dao.hibernate.common.CdmGenericDaoImpl.getReferencingObjects(CdmGenericDaoImpl.java:195) at eu.etaxonomy.cdm.api.service.CommonServiceImpl.getReferencingObjectsCount(CommonServiceImpl.java:109) at sun.reflect.GeneratedMethodAccessor1892.invoke(Unknown Source) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:497) at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:302) at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190) at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157) at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:110) at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:208) at com.sun.proxy.$Proxy554.getReferencingObjectsCount(Unknown Source) at sun.reflect.GeneratedMethodAccessor1892.invoke(Unknown Source) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:497) at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:302) at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190) at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157) at org.springframework.remoting.support.RemoteInvocationTraceInterceptor.invoke(RemoteInvocationTraceInterceptor.java:78) at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:208) at com.sun.proxy.$Proxy848.getReferencingObjectsCount(Unknown Source) at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:497) at org.springframework.remoting.support.RemoteInvocation.invoke(RemoteInvocation.java:212) at org.springframework.remoting.support.DefaultRemoteInvocationExecutor.invoke(DefaultRemoteInvocationExecutor.java:39) at org.springframework.remoting.support.RemoteInvocationBasedExporter.invoke(RemoteInvocationBasedExporter.java:78) at org.springframework.remoting.support.RemoteInvocationBasedExporter.invokeAndCreateResult(RemoteInvocationBasedExporter.java:114) at org.springframework.remoting.httpinvoker.HttpInvokerServiceExporter.handleRequest(HttpInvokerServiceExporter.java:74) at org.springframework.web.servlet.mvc.HttpRequestHandlerAdapter.handle(HttpRequestHandlerAdapter.java:51) at org.springframework.web.servlet.DispatcherServlet.doDispatch(DispatcherServlet.java:959) at org.springframework.web.servlet.DispatcherServlet.doService(DispatcherServlet.java:893) at org.springframework.web.servlet.FrameworkServlet.processRequest(FrameworkServlet.java:969) at org.springframework.web.servlet.FrameworkServlet.doPost(FrameworkServlet.java:871) at javax.servlet.http.HttpServlet.service(HttpServlet.java:707) at org.springframework.web.servlet.FrameworkServlet.service(FrameworkServlet.java:845) at javax.servlet.http.HttpServlet.service(HttpServlet.java:790) at org.eclipse.jetty.servlet.ServletHolder.handle(ServletHolder.java:808) at org.eclipse.jetty.servlet.ServletHandler$CachedChain.doFilter(ServletHandler.java:1669) at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:316) at org.springframework.security.web.access.intercept.FilterSecurityInterceptor.invoke(FilterSecurityInterceptor.java:126) at org.springframework.security.web.access.intercept.FilterSecurityInterceptor.doFilter(FilterSecurityInterceptor.java:90) at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:330) at org.springframework.security.web.access.ExceptionTranslationFilter.doFilter(ExceptionTranslationFilter.java:114) at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:330) at org.springframework.security.web.session.SessionManagementFilter.doFilter(SessionManagementFilter.java:122) at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:330) at org.springframework.security.web.servletapi.SecurityContextHolderAwareRequestFilter.doFilter(SecurityContextHolderAwareRequestFilter.java:169) at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:330) at org.springframework.security.web.savedrequest.RequestCacheAwareFilter.doFilter(RequestCacheAwareFilter.java:48) at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:330) at org.springframework.security.web.authentication.www.BasicAuthenticationFilter.doFilterInternal(BasicAuthenticationFilter.java:213) at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107) at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:330) at org.springframework.security.web.authentication.logout.LogoutFilter.doFilter(LogoutFilter.java:120) at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:330) at org.springframework.security.web.header.HeaderWriterFilter.doFilterInternal(HeaderWriterFilter.java:64) at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107) at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:330) at org.springframework.security.web.context.SecurityContextPersistenceFilter.doFilter(SecurityContextPersistenceFilter.java:91) at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:330) at org.springframework.security.web.context.request.async.WebAsyncManagerIntegrationFilter.doFilterInternal(WebAsyncManagerIntegrationFilter.java:53) at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107) at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:330) at org.springframework.security.web.FilterChainProxy.doFilterInternal(FilterChainProxy.java:213) at org.springframework.security.web.FilterChainProxy.doFilter(FilterChainProxy.java:176) at org.springframework.web.filter.DelegatingFilterProxy.invokeDelegate(DelegatingFilterProxy.java:346) at org.springframework.web.filter.DelegatingFilterProxy.doFilter(DelegatingFilterProxy.java:262) at org.eclipse.jetty.servlet.ServletHandler$CachedChain.doFilter(ServletHandler.java:1652) at org.springframework.web.filter.CharacterEncodingFilter.doFilterInternal(CharacterEncodingFilter.java:121) at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107) at org.eclipse.jetty.servlet.ServletHandler$CachedChain.doFilter(ServletHandler.java:1652) at org.eclipse.jetty.servlet.ServletHandler.doHandle(ServletHandler.java:585) at org.eclipse.jetty.server.handler.ScopedHandler.handle(ScopedHandler.java:143) at org.eclipse.jetty.security.SecurityHandler.handle(SecurityHandler.java:577) at org.eclipse.jetty.server.session.SessionHandler.doHandle(SessionHandler.java:223) at org.eclipse.jetty.server.handler.ContextHandler.doHandle(ContextHandler.java:1127) at org.eclipse.jetty.servlet.ServletHandler.doScope(ServletHandler.java:515) at org.eclipse.jetty.server.session.SessionHandler.doScope(SessionHandler.java:185) at org.eclipse.jetty.server.handler.ContextHandler.doScope(ContextHandler.java:1061) at org.eclipse.jetty.server.handler.ScopedHandler.handle(ScopedHandler.java:141) at org.eclipse.jetty.server.handler.ContextHandlerCollection.handle(ContextHandlerCollection.java:215) at org.eclipse.jetty.server.handler.HandlerWrapper.handle(HandlerWrapper.java:97) at org.eclipse.jetty.server.Server.handle(Server.java:497) at org.eclipse.jetty.server.HttpChannel.handle(HttpChannel.java:310) at org.eclipse.jetty.server.HttpConnection.onFillable(HttpConnection.java:257) at org.eclipse.jetty.io.AbstractConnection$2.run(AbstractConnection.java:540) at org.eclipse.jetty.util.thread.QueuedThreadPool.runJob(QueuedThreadPool.java:635) at org.eclipse.jetty.util.thread.QueuedThreadPool$3.run(QueuedThreadPool.java:555) at java.lang.Thread.run(Thread.java:745) at org.springframework.remoting.support.RemoteInvocationUtils.fillInClientStackTraceIfPossible(RemoteInvocationUtils.java:45) at org.springframework.remoting.support.RemoteInvocationResult.recreate(RemoteInvocationResult.java:149) at org.springframework.remoting.support.RemoteInvocationBasedAccessor.recreateRemoteInvocationResult(RemoteInvocationBasedAccessor.java:85) at org.springframework.remoting.httpinvoker.HttpInvokerClientInterceptor.invoke(HttpInvokerClientInterceptor.java:150) at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:208) at com.sun.proxy.$Proxy11.getReferencingObjectsCount(Unknown Source) at eu.etaxonomy.taxeditor.ui.section.reference.ReferenceDetailElement.setWarnForReferencingObjects(ReferenceDetailElement.java:611) at eu.etaxonomy.taxeditor.ui.section.reference.ReferenceDetailElement.createControls(ReferenceDetailElement.java:120) at eu.etaxonomy.taxeditor.ui.section.reference.ReferenceDetailElement.createControls(ReferenceDetailElement.java:1) at eu.etaxonomy.taxeditor.ui.section.AbstractCdmDetailElement.updateContent(AbstractCdmDetailElement.java:102) at eu.etaxonomy.taxeditor.ui.section.reference.ReferenceDetailElement.updateContent(ReferenceDetailElement.java:200) at eu.etaxonomy.taxeditor.ui.section.AbstractCdmDetailElement.setEntity(AbstractCdmDetailElement.java:89) at eu.etaxonomy.taxeditor.ui.section.reference.ReferenceWizardPage.createElement(ReferenceWizardPage.java:58) at eu.etaxonomy.taxeditor.ui.element.AbstractCdmEntityWizardPage.createControl(AbstractCdmEntityWizardPage.java:108) at org.eclipse.jface.wizard.Wizard.createPageControls(Wizard.java:174) at org.eclipse.jface.wizard.WizardDialog.createPageControls(WizardDialog.java:736) at org.eclipse.jface.wizard.WizardDialog.createContents(WizardDialog.java:608) at org.eclipse.jface.window.Window.create(Window.java:431) at org.eclipse.jface.dialogs.Dialog.create(Dialog.java:1089) at org.eclipse.jface.window.Window.open(Window.java:790) at eu.etaxonomy.taxeditor.ui.dialog.selection.AbstractFilteredCdmResourceSelectionDialog$3.widgetSelected(AbstractFilteredCdmResourceSelectionDialog.java:487) at org.eclipse.swt.widgets.TypedListener.handleEvent(TypedListener.java:240) at org.eclipse.swt.widgets.EventTable.sendEvent(EventTable.java:84) at org.eclipse.swt.widgets.Widget.sendEvent(Widget.java:1053) at org.eclipse.swt.widgets.Widget.sendEvent(Widget.java:1077) at org.eclipse.swt.widgets.Widget.sendSelectionEvent(Widget.java:1094) at org.eclipse.swt.widgets.Link.wmNotifyChild(Link.java:1071) at org.eclipse.swt.widgets.Control.wmNotify(Control.java:5534) at org.eclipse.swt.widgets.Composite.wmNotify(Composite.java:1896) at org.eclipse.swt.widgets.Control.WM_NOTIFY(Control.java:5086) at org.eclipse.swt.widgets.Control.windowProc(Control.java:4584) at org.eclipse.swt.widgets.Display.windowProc(Display.java:4985) at org.eclipse.swt.internal.win32.OS.CallWindowProcW(Native Method) at org.eclipse.swt.internal.win32.OS.CallWindowProc(OS.java:2425) at org.eclipse.swt.widgets.Link.callWindowProc(Link.java:172) at org.eclipse.swt.widgets.Widget.wmLButtonUp(Widget.java:2057) at org.eclipse.swt.widgets.Control.WM_LBUTTONUP(Control.java:4912) at org.eclipse.swt.widgets.Link.WM_LBUTTONUP(Link.java:909) at org.eclipse.swt.widgets.Control.windowProc(Control.java:4565) at org.eclipse.swt.widgets.Display.windowProc(Display.java:4985) at org.eclipse.swt.internal.win32.OS.DispatchMessageW(Native Method) at org.eclipse.swt.internal.win32.OS.DispatchMessage(OS.java:2531) at org.eclipse.swt.widgets.Display.readAndDispatch(Display.java:3752) at org.eclipse.jface.window.Window.runEventLoop(Window.java:825) at org.eclipse.jface.window.Window.open(Window.java:801) at eu.etaxonomy.taxeditor.ui.dialog.selection.AbstractFilteredCdmResourceSelectionDialog.getSelectionFromDialog(AbstractFilteredCdmResourceSelectionDialog.java:148) at eu.etaxonomy.taxeditor.ui.dialog.selection.NomenclaturalReferenceSelectionDialog.select(NomenclaturalReferenceSelectionDialog.java:89) at eu.etaxonomy.taxeditor.ui.dialog.selection.SelectionDialogFactory.getSelectionFromDialog(SelectionDialogFactory.java:80) at eu.etaxonomy.taxeditor.ui.selection.EntitySelectionElement.widgetSelected(EntitySelectionElement.java:223) at org.eclipse.swt.widgets.TypedListener.handleEvent(TypedListener.java:240) at org.eclipse.swt.widgets.EventTable.sendEvent(EventTable.java:84) at org.eclipse.swt.widgets.Widget.sendEvent(Widget.java:1053) at org.eclipse.swt.widgets.Display.runDeferredEvents(Display.java:4165) at org.eclipse.swt.widgets.Display.readAndDispatch(Display.java:3754) at org.eclipse.ui.internal.Workbench.runEventLoop(Workbench.java:2701) at org.eclipse.ui.internal.Workbench.runUI(Workbench.java:2665) at org.eclipse.ui.internal.Workbench.access$4(Workbench.java:2499) at org.eclipse.ui.internal.Workbench$7.run(Workbench.java:679) at org.eclipse.core.databinding.observable.Realm.runWithDefault(Realm.java:332) at org.eclipse.ui.internal.Workbench.createAndRunWorkbench(Workbench.java:668) at org.eclipse.ui.PlatformUI.createAndRunWorkbench(PlatformUI.java:149) at eu.etaxonomy.taxeditor.Application.start(Application.java:24) at org.eclipse.equinox.internal.app.EclipseAppHandle.run(EclipseAppHandle.java:196) at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.runApplication(EclipseAppLauncher.java:110) at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.start(EclipseAppLauncher.java:79) at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:344) at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:179) at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:606) at org.eclipse.equinox.launcher.Main.invokeFramework(Main.java:622) at org.eclipse.equinox.launcher.Main.basicRun(Main.java:577) at org.eclipse.equinox.launcher.Main.run(Main.java:1410) Caused by: org.hibernate.TransientObjectException: object references an unsaved transient instance - save the transient instance before flushing: eu.etaxonomy.cdm.model.reference.Reference at org.hibernate.engine.internal.ForeignKeys.getEntityIdentifierIfNotUnsaved(ForeignKeys.java:279) at org.hibernate.type.EntityType.getIdentifier(EntityType.java:455) at org.hibernate.type.ManyToOneType.nullSafeSet(ManyToOneType.java:153) at org.hibernate.param.NamedParameterSpecification.bind(NamedParameterSpecification.java:52) at org.hibernate.loader.hql.QueryLoader.bindParameterValues(QueryLoader.java:627) at org.hibernate.loader.Loader.prepareQueryStatement(Loader.java:1944) at org.hibernate.loader.Loader.executeQueryStatement(Loader.java:1897) at org.hibernate.loader.Loader.executeQueryStatement(Loader.java:1875) at org.hibernate.loader.Loader.doQuery(Loader.java:919) at org.hibernate.loader.Loader.doQueryAndInitializeNonLazyCollections(Loader.java:336) at org.hibernate.loader.Loader.doList(Loader.java:2611) at org.hibernate.loader.Loader.doList(Loader.java:2594) at org.hibernate.loader.Loader.listIgnoreQueryCache(Loader.java:2423) at org.hibernate.loader.Loader.list(Loader.java:2418) at org.hibernate.loader.hql.QueryLoader.list(QueryLoader.java:501) at org.hibernate.hql.internal.ast.QueryTranslatorImpl.list(QueryTranslatorImpl.java:371) at org.hibernate.engine.query.spi.HQLQueryPlan.performList(HQLQueryPlan.java:216) at org.hibernate.internal.SessionImpl.list(SessionImpl.java:1326) at org.hibernate.internal.QueryImpl.list(QueryImpl.java:87) at eu.etaxonomy.cdm.persistence.dao.hibernate.common.CdmGenericDaoImpl.getCdmBasesWithItemInCollection(CdmGenericDaoImpl.java:134) at eu.etaxonomy.cdm.persistence.dao.hibernate.common.CdmGenericDaoImpl.handleReferenceHolder(CdmGenericDaoImpl.java:269) at eu.etaxonomy.cdm.persistence.dao.hibernate.common.CdmGenericDaoImpl.getReferencingObjects(CdmGenericDaoImpl.java:190) ... 166 more
Related issues
Updated by Andreas Müller over 7 years ago
- Priority changed from New to Highest
- Severity changed from normal to blocker
Updated by Andreas Müller over 7 years ago
- Blocks bug #6129: After creating a new Reference in selection dialog, it could not be found in the selection dialog added
Updated by Andreas Müller over 7 years ago
- Related to bug #6176: Creating a new Reference throws TOE (TransientObjectException) added
Updated by Andreas Müller over 7 years ago
This issue is very similar to #6176 (but not exactly a duplicate I guess)
Updated by Andreas Müller over 7 years ago
- Status changed from New to Duplicate
- Target version deleted (
Release 4.4)
Looks like this was fixed together with #6178. As it was only a temporary regression within v4.4 snapshot I remove the target version.
Updated by Andreas Müller over 7 years ago
- Blocks deleted (bug #6129: After creating a new Reference in selection dialog, it could not be found in the selection dialog)
Updated by Andreas Müller over 7 years ago
- Related to feature request #5972: Prevent user from unwanted author and reference updates added
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