Andreas Müller's activity
From 12/23/2019 to 01/21/2020
01/21/2020
- 04:56 PM EDIT Revision 09e88a38 (cdmlib): ref #1447 reimplement getParentTaxonNodeDtoForRank() to fetch taxa of specific higher ranks
- 04:53 PM EDIT Revision 2d726275 (cdmlib): ref #1447 add ancestor id splitter to TreeIndex
- 02:14 PM EDIT Revision 820ca4ec (cdmlib): cleanup
- 12:11 PM EDIT Revision 5af794eb (cdmlib): cleanup and add CdmRegEx
01/20/2020
- 04:44 PM EDIT Revision f7d60a17 (cdmlib): cleanup
- 04:44 PM EDIT Revision 2a055418 (cdmlib): add parameterized HQL API access
- 04:04 PM EDIT bug #8821 (New): ConcurrentModificationException during deduplication in bulk editor
- Hallo,
etwas Neues – Referenzen Deduplizierung, nach delete Nachfrage Save für vorheriges Delete.
HG
W
~~~
log... - 03:53 PM EDIT bug #8627: NullPointerException (NPE) on saving Specimen Editor (list)
- AK, why is this a **copy** of #8626?
Did you mean "related to"? - 03:50 PM EDIT bug #7699 (New): NPE in CdmTransientEntityCacher.getCacheElement()
- This exception appears quite often therefore I put it to the current milestone.
We need to find to handle it so t... - 03:06 PM EDIT feature request #8721 (Closed): Use webservice to get all biocase provider listed by gbif
- Generally this works. Open issues moved to #8820
- 03:04 PM EDIT task #8820 (New): Improve BioCase provider selection list
- Copied from #8721
* The access points should be searchable also by the accesspoint title, For the BGBM Herbarium t... - 02:59 PM EDIT Wiki edit: Release_Notes (#544)
- 02:38 PM EDIT Wiki edit: Release_Notes (#543)
- 02:33 PM EDIT Wiki edit: Release_Notes (#542)
- 02:52 PM EDIT feature request #8489 (Resolved): Further issues for DB preferences
- putting back to 5.10 for review, no changes since then. Follow up ticket for open issues: #8818.
During review put n... - 02:48 PM EDIT task #8818 (New): Remaining issues for DB preferences
- Copied from #8489
* check wether all (wanted) preferences are available as db preferences
* menu.disableMul... - 12:55 PM EDIT feature request #8677 (Closed): Add distribution aggregation to set subtree menu
- >source type selection per source mode
maybe there is a misunderstanding, I meant source **type** . There is still... - 12:50 PM EDIT feature request #8677: Add distribution aggregation to set subtree menu
- >use message() for enumeration labels
This seems not yet to be used by "Aggregation mode". I move this to follow u... - 12:45 PM EDIT feature request #8805 (Closed): In distribution editor synoms should be available as concatenated String
- Works and ticket can be closed. Maybe in future we can also include ppSyns and MAN and maybe there is even the possib...
- 10:48 AM EDIT feature request #8805 (Resolved): In distribution editor synoms should be available as concatenated String
- 12:21 PM EDIT Revision e756cd24 (cdmlib): ref #8815 adapt return type for uuidAndTitleCache method in taxonNodeService
- 12:12 PM EDIT bug #8736 (Feedback): LazyInitializationException (LIE) during adding Specimens to Matrix Editor
- I guess this can be closed in 5.12 as there is a follow up ticket in 5.13?
- 11:45 AM EDIT Revision 5bb4d1e3 (cdmlib): preliminary ignore DistributionAggregationTest
- 11:20 AM EDIT Revision f24b885c (cdmlib): cleanup
- 11:19 AM EDIT Revision 7de0210e (cdmlib): preliminary ignore StructuredDescriptionAggregationTest
- 11:19 AM EDIT Revision df326698 (cdmlib): cleanup
- 11:15 AM EDIT Revision b4188660 (taxeditor): ref #8805 fix potential NPE
- 11:05 AM EDIT bug #6585 (Feedback): Combo menu items have orange font
- 11:01 AM EDIT Revision f59c3f4b (cdmlib): ref #8805 cleanup TaxonDistributionDTO and simplify concatenateSynonyms method
- 10:37 AM EDIT bug #8645 (Closed): rename menu item General > Import > "OWL Import" to "Term Tree OWL Import"
- fixed
01/18/2020
- 04:22 PM EDIT Revision 4e41b80c (cdmlib-apps): ref #2826 handle verbatim years better
- 04:21 PM EDIT Revision a9047fed (cdmlib-apps): ref #2826 handle ined. authors
- 04:20 PM EDIT Revision 8fb964f0 (cdmlib-apps): ref #2826 cleanup
- 12:19 PM EDIT Revision deed567d (cdmlib-apps): ref #2826 remove not needed cdmTargetClass
- 11:45 AM EDIT Revision bb5bac58 (cdmlib-apps): minor, cleanup
01/17/2020
- 08:25 PM EDIT Revision 046b8cfb (cdmlib): cleanup
- 09:08 AM EDIT bug #8814: Clean implementation for permissions with combination of Taxonnode and other permissions
- Please always add "related issues" to follow up tickets not only in ticket description. This way it is linked bedirec...
01/16/2020
- 05:11 PM EDIT bug #8810 (Feedback): In taxeditor parts without permissions should be disabled
- 01:53 PM EDIT bug #8810 (Resolved): In taxeditor parts without permissions should be disabled
- 05:09 PM EDIT feature request #8805 (Feedback): In distribution editor synoms should be available as concatenated String
- For me no synonyms are shown in the column. I tested on rem_conf_am with classification "Testklass". At least taxon N...
- 04:51 PM EDIT Wiki edit: Release_Notes (#541)
- 01:07 PM EDIT Wiki edit: Release_Notes (#540)
- 12:52 PM EDIT Wiki edit: Release_Notes (#539)
- 11:49 AM EDIT Wiki edit: Release_Notes (#538)
- 11:38 AM EDIT Wiki edit: Release_Notes (#537)
- 10:35 AM EDIT Wiki edit: Release_Notes (#536)
- 10:34 AM EDIT Wiki edit: Release_Notes (#535)
- 10:20 AM EDIT Wiki edit: Release_Notes (#534)
- 10:19 AM EDIT Wiki edit: Release_Notes (#533)
- 02:01 PM EDIT feature request #8749: Add proposalProvider to AbstractComboElement
- should we split the ticket and move open issue to 5.13. At least partly it works as far as I remember from vocabulary...
- 01:42 PM EDIT bug #8745 (Resolved): Type designations of synonyms missing on specimen page
- 01:38 PM EDIT feature request #8299: add typification column to scientific name and homotypical group in cdm light
- I don't think we should move this. It was probably fixed in 5.12
- 01:10 PM EDIT bug #8790 (In Progress): Update measurement units for existing quantitative data missing a unit
- 01:08 PM EDIT task #8672: Source handling during (distribution) aggregation
- This might be partly implemented in 5.12 already. If fully fixed revert milestone to 5.12
- 01:05 PM EDIT feature request #8677 (Resolved): Add distribution aggregation to set subtree menu
- Moved open issues to #8811
Review needed for **this** ticket. - 01:04 PM EDIT task #8811 (New): Open issues for "Add distribution aggregation to set subtree menu"
- copied from #8677
* disable rank fields in case aggregation should run only on the 1 selected taxon (and not on s... - 12:55 PM EDIT bug #8788 (Feedback): Cloned descriptions do not show up in dataportal anymore
- Is this still an open issue? I somehow remember that you have worked on it at the beginning of the year.
- 12:23 PM EDIT feature request #6812: Improve TaxEditor download site
- Issues open here?
- 11:29 AM EDIT task #8130: Check if related feature data is cleared when supported facts type is changed
- I guess this is not yet fixed.
- 11:24 AM EDIT bug #8808 (Closed): Cdm-Light Export fix name identifier export
- I won't review as it takes too much time. I guess feedback from WGB should be enough.
- 10:14 AM EDIT bug #8797 (Closed): Navigator tree collapse after moving taxon node
- This works as expected now.
- 09:59 AM EDIT bug #8806: Multiple representations problem on saving Desriptive Data Set
- If this is reproducable it should be fixed soon.
01/15/2020
- 03:09 PM EDIT bug #8511 (Closed): The structure path in the character details view should have a line break
- This works as expected
- 01:57 PM EDIT feature request #8656 (Closed): [DISCUSS] Should only characters be allowed for DescriptiveDataSets/Character Matrix?
- This is fixed with the new implementation.
- 01:48 PM EDIT bug #8797 (Feedback): Navigator tree collapse after moving taxon node
- For me the problem still exists. No matter if I use d&d or menu or if I move within a classification or to another cl...
- 01:44 PM EDIT bug #8801 (Closed): Deselected menu items are not reactivated in navigator
- Works as expected now
- 01:40 PM EDIT bug #8804: taxeditor hangs when creating a new classification
- Can you please test on test/nightly also. This is our reference system for ticket reviews etc. Ofcourse we also need ...
- 01:17 PM EDIT bug #8804: taxeditor hangs when creating a new classification
- I can't reproduce this. Can you give more information. I created classifications in multiple DBs and it worked.
Whic... - 01:21 PM EDIT bug #8737: delete taxon included in two classifications deletes taxonname
- Please test on test/caryo_spp. #8804 is not valid for at least this DB (at least on my pc).
- 11:13 AM EDIT feature request #8803 (Resolved): Add "per mm²" to measurement units
- Applied in changeset commit:cdmlib|a65a935cd5279773ac1d32f98e4be04ecd5ea065.
- 11:08 AM EDIT feature request #8803 (Closed): Add "per mm²" to measurement units
- This is needed for some Cactaceae characters
- 11:12 AM EDIT Revision 6ad1062d (cdmlib): cleanup
- 11:12 AM EDIT Revision a65a935c (cdmlib): fix #8803 add per mm² to MeasurementUnit
- 11:12 AM EDIT Revision 5675e611 (cdmlib): fix getPage() for deduplication
- 11:12 AM EDIT Revision 30df4b0a (cdmlib): cleanup
01/14/2020
- 04:27 PM EDIT Revision 207beb84 (cdmlib-apps): cleanup
- 04:23 PM EDIT Revision bddc23ae (cdmlib-apps): minor changes to PESI Activators
- 04:15 PM EDIT Revision 567f10b2 (cdmlib-apps): latest changes to GreeceImageActivator
- 04:13 PM EDIT Revision 3f131c46 (cdmlib-apps): ref #1447 handle null and ERMS pseudo taxa and some minor changes
- 11:31 AM EDIT feature request #8802 (In Progress): Implement flowering period for Flora of Cyprus
- 11:31 AM EDIT feature request #8802 (Closed): Implement flowering period for Flora of Cyprus
- (was "Blütezeiten")
This includes a new DescriptionElement subclass "TermporalData" and a new TimePeriod subclass ...
01/13/2020
- 04:35 PM EDIT Revision 6b99e174 (cdmlib-apps): ref #1447 underscore for parent diff file
- 03:11 PM EDIT Revision fd411b34 (cdmlib-apps): ref #1447 remove unncessary casts and cleanup
- 02:48 PM EDIT Revision a163fed9 (cdmlib-apps): ref #1447 add utf8 to writer
01/12/2020
- 01:05 AM EDIT Revision ab6f97de (cdmlib-apps): cleanup
- 01:02 AM EDIT Revision 874a38f5 (cdmlib-apps): ref #8643 fix FaEu destination 2
01/10/2020
- 02:20 PM EDIT Revision 2e91751e (cdmlib): ref #1447 add StringComparator
- 01:01 PM EDIT Revision b5b0fcf5 (cdmlib-apps): ref #1447 improve PesiFindIdenticalNamesActivator
- 12:38 PM EDIT Revision c938072f (cdmlib): ref #1447 fix findIdenticalName function
- 12:07 PM EDIT Revision fa9ef8c4 (cdmlib): minor
01/09/2020
- 12:53 PM EDIT Revision 86fd29ff (cdmlib): ref #1447 change duplicate finding of names from sec to source reference and allow >2 sources
- 12:30 PM EDIT feature request #8771: display of average value with precision so that it differs from min and max by one digit
- Die Zeile verstehe ich nicht:
$precision += $precision < 0 ? - 1 : 1;
Warum muss die Richtung der Präzision... - 12:04 PM EDIT feature request #8771: display of average value with precision so that it differs from min and max by one digit
- Example on test/cactaceae:
http://test.e-taxonomy.eu/dataportal/preview/caryophyllales_spp/cdm_dataportal/descript... - 11:47 AM EDIT feature request #8771: display of average value with precision so that it differs from min and max by one digit
- Is there an example page available?
- 11:46 AM EDIT feature request #8771 (Feedback): display of average value with precision so that it differs from min and max by one digit
- 3 Verbesserungsvorschläge:
* Avg, StdAbw und Var nur ausblenden bei min=max, wenn Avg=min(=max) bzw. StdAbw und Va...
01/08/2020
- 01:29 PM EDIT bug #8800 (Resolved): If supplemental data view shows reference it is not possible to select another reference
- Applied in changeset commit:cdmlib|db7b0ee79b966b68a1d2958214303d4b101f1022.
- 12:32 PM EDIT bug #8800: If supplemental data view shows reference it is not possible to select another reference
- I checked Walters log-file (see below). So he also got an error in ReferenceDaoHibernateImpl.getUuidAndTitle but in a...
- 12:14 PM EDIT bug #8800: If supplemental data view shows reference it is not possible to select another reference
- AM:
Das klingt ein bisschen wie der Fehler den ich gestern mit dem nicht möglichen Aufrufen des Referenzdialoges f... - 01:28 PM EDIT Revision db7b0ee7 (cdmlib): fix #8800 fix NPE in Reference.getUuidAndTitle
- 12:19 PM EDIT bug #8801: Deselected menu items are not reactivated in navigator
- Being resolved this can go into 5.12, correct?
01/07/2020
- 06:19 PM EDIT Revision 4f67e0f9 (cdmlib): temporarily ignore SortIndexUpdaterWrapperTest
- 06:19 PM EDIT Revision 8b3c844e (cdmlib): cleanup and javadoc
- 04:50 PM EDIT feature request #8787: Improve layout for ExactValue on Description Pages
- Andreas Kohlbecker wrote:
> Implemented.
>
> I did not change the separator to semicolon since we are using the ... - 04:16 PM EDIT task #8799 (New): [PESI][E+M] [Discuss] Use reference author instead of (sec)-reference for (Species)ExpertName
- Other databases in PESI use only the expert name (e.g. http://www.eu-nomen.eu/portal/taxon.php?GUID=urn:lsid:marinesp...
01/06/2020
- 05:01 PM EDIT Revision 34743ac7 (cdmlib-apps): ref #8508, ref #8577 treeindex test for E+M validation and common base class for E+M and Erms validation
- 04:57 PM EDIT Revision bc416076 (cdmlib-apps): ref #1447 cleanup FaunaEuErmsFindIdenticalNamesActivator
12/28/2019
- 04:10 PM EDIT Revision 2eee7850 (cdmlib-apps): ref #1444 minor fixes for ErmsImportActivator
- 04:09 PM EDIT Revision 85c9a0d8 (cdmlib-apps): ref #2717 fix sourceFk handling for pure names
- 04:08 PM EDIT Revision 19743136 (cdmlib-apps): ref #8508 fix and finalize taxon status (cache) validation
- 11:51 AM EDIT Wiki edit: Erms_mapping (#13)
- 11:45 AM EDIT Revision 3d6c7bfc (cdmlib-apps): ref #1444, ref #8508, ref #8509 fix ERMS taxon status handling
- 10:48 AM EDIT Revision f859201a (cdmlib-apps): ref #8508 further improvements to ERMS validation
12/27/2019
- 11:16 PM EDIT Revision 0e601fdc (cdmlib-apps): ref #8509 fix sourceFk handling in PESI taxon export
- 11:14 PM EDIT Revision 744bd412 (cdmlib-apps): ref #8509 improve tagged names handling in PESI export (ERMS and others)
- 11:11 PM EDIT Revision c0411992 (cdmlib-apps): ref #1444, ref #7976 fix erronous subgenus formatting in ERMS
- 11:09 PM EDIT Revision c12d2903 (cdmlib-apps): ref #1444, ref #7976 better logging for unhandled unacceptReason
- 10:49 PM EDIT Revision 15d48661 (cdmlib-apps): cleanup
- 04:48 PM EDIT task #8796 (New): [PESI][DW] Handling of Taxon.SourceFk
- In SQL Script the Taxon.SourceFk was filled the following way:
* for taxa from ERMS, FauEU and IF it was filled by... - 12:41 PM EDIT Wiki edit: Erms_mapping (#12)
- 11:09 AM EDIT bug #8508 (In Progress): [PESI][ERMS] ERMS import pipeline validation
- 09:48 AM EDIT Revision 2abd2851 (cdmlib-apps): ref #8508 improve treeindex validation and remove source type 'i' handling
- 09:39 AM EDIT Revision 8f402cc0 (cdmlib-apps): ref #1444, ref #2871, ref #7976 improve authorship handling for MAN
- 09:37 AM EDIT Revision 751d08a3 (cdmlib-apps): ref #1444 remove 2 taxon status checks from ErmsTaxonImportValidator as they are not correct anymore
- - status is now handled via id and tu_accfinal, not via taxonStatus field
- 09:31 AM EDIT task #8795 (New): [PESI][DW] CHECK all fields on correct handling of merged data in PESI export
- Sometimes merged data needs to be pipe separated or something else. All fields need to be checked if they handle this...
12/26/2019
- 11:33 PM EDIT task #8794 (New): [PESI][Merge]+[DW] Check all SQL scripts related to merging
- Check all SQL script which are not single DB specific on Y:\BDI\PESI\sh\DBs2PESI\vCDM
- 09:12 PM EDIT Revision a12e9e83 (cdmlib-apps): ref #2104 remove fixme from unused PesiNoteSourceExport_Old
- 08:07 PM EDIT bug #8793 (New): [E+M] In-Ref authors should have full (non-abbreviated) author title without initials
- This is a E+M requirement for nom. ref. formatting
- 07:29 PM EDIT Revision dd68b822 (cdmlib-apps): ref #8508 latest changes
- 07:28 PM EDIT Revision e706b35f (cdmlib-apps): cleanup
- 07:21 PM EDIT Revision 58968197 (cdmlib-apps): ref #1444, ref #7976 improve misapplication handling in ERMS import
- 06:41 PM EDIT task #7976 (Closed): [PESI][ERMS] Erms taxon import
- 05:02 PM EDIT task #8792: Issues to have in mind for ERMS import
- Open issues from comparing SQL scripts (Y:\BDI\PESI\sh\DBs2PESI\vCDM\):
!!!! Do check again because maybe I checke... - 12:06 PM EDIT task #8792 (New): Issues to have in mind for ERMS import
- The functioning of the ERMS import (and PESI export) is explained at: [[Erms_mapping]]
## General information
O... - 03:38 PM EDIT Wiki edit: Erms_mapping (#11)
- 03:38 PM EDIT Wiki edit: Erms_mapping (#10)
- 03:37 PM EDIT Wiki edit: Erms_mapping (#9)
- 03:37 PM EDIT Wiki edit: Erms_mapping (#8)
- 02:40 PM EDIT Wiki edit: Erms_mapping (#7)
- 02:02 PM EDIT Wiki edit: Erms_mapping (#6)
- 01:28 PM EDIT Wiki edit: Erms_mapping (#5)
- 12:56 PM EDIT Wiki edit: Erms_mapping (#4)
- 12:41 PM EDIT Wiki edit: Erms_mapping (#3)
- 12:40 PM EDIT Wiki edit: Erms_mapping (#2)
- 12:17 PM EDIT Wiki edit: Erms_mapping (#1)
- 01:59 PM EDIT Revision d4c6ec84 (cdmlib-apps): ref #8508 minor and cleanup
- 01:56 PM EDIT Revision 0d26082d (cdmlib-apps): ref #8509 handle new ERMS quality status "Thematic Editor"
- 01:55 PM EDIT Revision bd4c4dee (cdmlib-apps): ref #1444, #8509 fix pipeline handling in ErmsImportActivator
- 01:54 PM EDIT Revision 2a2eb365 (cdmlib-apps): ref #1444 replace tu_acctaxon by tu_accfinal
12/24/2019
- 01:52 AM EDIT Revision 8419d12a (cdmlib-apps): ref #8508 latest changes to ERMS validation
- 01:51 AM EDIT Revision 98d96cf6 (cdmlib-apps): cleanup
- 01:45 AM EDIT Revision c44a40e4 (cdmlib-apps): ref #8509 fix taxonStatus export for ERMS
12/23/2019
- 09:37 PM EDIT Revision 0cd4c1a9 (cdmlib-apps): cleanup
- 09:36 PM EDIT Revision 7373dcf3 (cdmlib-apps): ref #2717 remove publish marker and uuidMisappliedCommonName marker handling because not needed anymore
- 09:32 PM EDIT Revision ec9963cf (cdmlib-apps): ref #2717 add 2nd source to EuroMedSourceActivator
- 08:56 PM EDIT Revision ea77fefa (cdmlib-apps): ref #1444 handle missing sourceUse
- 08:31 PM EDIT Revision 4c575756 (cdmlib-apps): ref #1444 minor changes and cleanup
- 08:30 PM EDIT Revision bd1bdb28 (cdmlib-apps): ref #1444 some changes due to upgrade to ERMS v2019
- 08:28 PM EDIT Revision e4598bb4 (cdmlib-apps): ref #1444 add new ERMS source and rename old one
- 12:09 PM EDIT feature request #8441 (Closed): Add FeatureState class
- I think we can close this ticket.
- 10:00 AM EDIT Revision 5d17ab2a (cdmlib-apps): cleanup and move isIgnoreNull from base configurator to BMconfig only
- 09:58 AM EDIT Revision cb5cbca9 (cdmlib): remove ignoreNull from ImportConfiguratorBase
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