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Andreas Kohlbecker's activity

From 04/27/2019 to 05/26/2019

05/26/2019

05:55 PM EDIT feature request #8304 (Feedback): Name page redirects to according taxon depending on query parameter
As requested in #8108 the redirection behavior of the name page to the related taxon (if there is only one) should be... Andreas Kohlbecker

05/24/2019

11:36 PM EDIT bug #6523 (Resolved): Correct display of misspellings in synonymy
Dies sollte nun soweit in Ordnung sein.
Es gibt jedoch noch offene Fragen:
1. Ist es richtig, dass die "is miss...
Andreas Kohlbecker
06:10 PM EDIT bug #6523 (Feedback): Correct display of misspellings in synonymy
sollen misspellings überhaupt in der form "non ... nec ..." dargestellt werden? Andreas Kohlbecker
11:06 PM EDIT Revision 7efd13a9 (cdm-dataportal): implementing misspelling for ref #6523; implementing name rel type filter for direct and inverse edges for #5855
Andreas Kohlbecker
06:07 PM EDIT Revision 1636cc86 (cdm-dataportal): fixing regression ref #5697: including conserverd against in non ... nec ... , ref #4177 removing dom block from inline name rels
Andreas Kohlbecker
04:31 PM EDIT Revision 96614dfe (cdm-dataportal): ref #4177 test for improved and more consistet implementation of the inline representation of name relationships
Andreas Kohlbecker
04:13 PM EDIT feature request #7975: Implement a block to display name relations
fully implemented an ready for review Andreas Kohlbecker
11:52 AM EDIT feature request #7975 (Resolved): Implement a block to display name relations
Applied in changeset commit:cdm-dataportal|ef686dd8e7c670f958e414ee6809803cc4807882. Andreas Kohlbecker
04:12 PM EDIT feature request #8196: display ortographic corrections in name relations as 'corrected name: <nameCache>'
one little bit is missing: we need to set the inverse label of the relationship term to "corrected name" in the datab... Andreas Kohlbecker
03:36 PM EDIT feature request #8196: display ortographic corrections in name relations as 'corrected name: <nameCache>'
completed, please review Andreas Kohlbecker
11:52 AM EDIT feature request #8196 (Resolved): display ortographic corrections in name relations as 'corrected name: <nameCache>'
Applied in changeset commit:cdm-dataportal|ef686dd8e7c670f958e414ee6809803cc4807882. Andreas Kohlbecker
03:52 PM EDIT Revision b465e8d2 (cdm-vaadin): bugfix related to initstrategy
Andreas Kohlbecker
03:40 PM EDIT discussion #6678: [DISCUSS] How to correctly show name relationship "orth. var." in dataportal
since different projects may require different representation. See for example #7975 where "has orthographic variant"... Andreas Kohlbecker
01:59 PM EDIT Revision 86dde6da (cdmlib): ref #8209 modularization of reference init strategies - bug fix
Andreas Kohlbecker
11:52 AM EDIT Revision ef686dd8 (cdm-dataportal): fix #7975 fix #8196 name relationships list representation implemented
Andreas Kohlbecker
11:49 AM EDIT Revision 26e4e4de (cdmlib): ref #8209 modularization of reference init strategies
Andreas Kohlbecker
11:36 AM EDIT Revision 01ca9bae (cdmlib): ref #8209 modularization of reference init strategies and improving EntitiyInitStrategy class
Andreas Kohlbecker
11:22 AM EDIT Revision 1a2cb532 (cdm-vaadin): ref #8209 modularization of reference init strategies by using the EntitiyInitStrategy class
Andreas Kohlbecker

05/23/2019

07:42 AM EDIT bug #8252: reference ellypsis must not be applied to all reference types
Since there are no more obvious problems with reference ellypsis we can close this issue, agreed? Andreas Kohlbecker

05/22/2019

05:06 PM EDIT Revision 2f30124c (cdm-dataportal): ref #8182 sloving problems with blast search menu items and renaming constants
Andreas Kohlbecker
08:49 AM EDIT bug #8252 (Resolved): reference ellypsis must not be applied to all reference types
The improvement is implemented, please review once the test server is updated. Andreas Kohlbecker
08:47 AM EDIT Revision b25e560f (cdmlib): ref #8252 preserving section authors and better title compentation
Andreas Kohlbecker

05/21/2019

11:59 AM EDIT discussion #6678 (Feedback): [DISCUSS] How to correctly show name relationship "orth. var." in dataportal
please answer to the questions in comment 3 Andreas Kohlbecker
11:57 AM EDIT Revision 23a017dd (cdm-dataportal): ref #6678 showing the prefix 'orth. var.' for orthogtapic variants
Andreas Kohlbecker
11:55 AM EDIT bug #8252 (In Progress): reference ellypsis must not be applied to all reference types
During a phone call today we decided to give the following solution a try:
1. The section author team will be trun...
Andreas Kohlbecker
08:20 AM EDIT feature request #5855 (Closed): potential improvements in settings for name relationship types
i am closing this issue now, please reopen I if you feel like you want to review this. Andreas Kohlbecker
08:13 AM EDIT feature request #5855 (Resolved): potential improvements in settings for name relationship types
Applied in changeset commit:cdm-dataportal|cd4f8f20a3ebe850407af662a1f3295bd2b3c488. Andreas Kohlbecker
08:13 AM EDIT Revision cd4f8f20 (cdm-dataportal): fix #5855 improving name relations settings:
- limiting select options
- differentiating from releations to be displayed in name page
Andreas Kohlbecker

05/20/2019

06:34 PM EDIT Revision 16592d77 (cdm-dataportal): ref #7975 renaming name relationshiop render method to emphazize on inline nature of the result
Andreas Kohlbecker
06:28 PM EDIT feature request #7975: Implement a block to display name relations
This is rather a request for a new feature than an improvement for the existing implementation which creates an inlin... Andreas Kohlbecker
04:41 PM EDIT task #5856 (Feedback): [DISCUSS] Consider implemeting additional name relationships
Is this still relevant or will the original spelling relation be removed anyway in turn of solving #3967? Andreas Kohlbecker
04:26 PM EDIT discussion #6678: [DISCUSS] How to correctly show name relationship "orth. var." in dataportal
I am having two questions regarding the ticket description:
> Maybe it is even enough to only show "orth. var." ...
Andreas Kohlbecker
03:14 PM EDIT bug #5774 (Closed): cdmserver misses to detect some errors in failed instances
It occurred again in the demo1 server.
Problem fixed.
Since it is quite time consuming to do do all the testing...
Andreas Kohlbecker
03:11 PM EDIT bug #5774 (Resolved): cdmserver misses to detect some errors in failed instances
Applied in changeset commit:cdm-server|0d7b39c76dff44342ce55bf721168a6974fccdab. Andreas Kohlbecker
03:10 PM EDIT bug #5774 (In Progress): cdmserver misses to detect some errors in failed instances
Andreas Kohlbecker
03:11 PM EDIT Revision 0d7b39c7 (cdm-server): fix #5774 configuring webapp contexts to re-throw errors on startup
Andreas Kohlbecker
01:16 PM EDIT feature request #8284 (Resolved): starting a registration for an existing name causes the name editor to pop up in read only mode
Vorschlag übernommen für beide Fälle. Dann können wir dieses Ticket schließen? Andreas Kohlbecker
01:15 PM EDIT Revision 2011fbd2 (cdm-vaadin): ref #8284 changing user hint regarding how to proceed with entering types for an existing name
Andreas Kohlbecker
01:01 PM EDIT Revision a0d2a22c (cdm-dataportal): ref #8287 comment to re-enable multi selection of options once the web service bug is fixed
Andreas Kohlbecker
12:59 PM EDIT feature request #7966: Registration search simplify type select options
@Henning: please review Andreas Kohlbecker
12:58 PM EDIT feature request #7966: Registration search simplify type select options
This issue is solved, however there is a problem in the service method driving the search (#8287) due to which the op... Andreas Kohlbecker
12:37 PM EDIT feature request #7966 (Resolved): Registration search simplify type select options
Applied in changeset commit:cdm-dataportal|84ec1c1b58a6d4667402a3f456f90e76c92ad5c5. Andreas Kohlbecker
12:56 PM EDIT bug #8287 (Closed): RegistrationServiceImpl.page( .... Collection<UUID> typeDesignationStatusUuids ... ) fails when NULL and UUIDs are passed
In case the collection of typeDesignationStatusUuids contains both, a `null` value and UUIDs the request fails.
Th...
Andreas Kohlbecker
12:38 PM EDIT Revision dc58a71b (cdm-dataportal): fix #7966 using the TypeDesignationStatusFilter to simplify the registration search by status type
Andreas Kohlbecker
12:37 PM EDIT Revision 84ec1c1b (cdm-dataportal): fix #7966 using the TypeDesignationStatusFilter to simplify the registration search by status type
Andreas Kohlbecker
12:35 PM EDIT Revision fa2b2dbb (cdmlib): ref #7966 preparing web service contollers to search for NULL type status via UUID parameter
Andreas Kohlbecker
12:33 PM EDIT feature request #7610 (Duplicate): Type search in PhycoBank Portal
Ok to close this as duplicate given by henning in #7965#note-11 implicitely Andreas Kohlbecker

05/17/2019

04:13 PM EDIT bug #8278 (Resolved): LazyInitializationException (LIE) in ReferenceEllypsisCaptionGenerator
most probably fixed - please close if the LIE no longer occurs. Andreas Kohlbecker
04:11 PM EDIT feature request #7965 (Closed): Registration search simplify type select options
Andreas Kohlbecker
04:05 PM EDIT feature request #7965: Registration search simplify type select options
NPE fixed by commit:cdm-vaadin|5fd9990b
So I will close this ticket now.
#7966 will be implemented in according...
Andreas Kohlbecker
03:34 PM EDIT feature request #7965: Registration search simplify type select options
Hallo Andreas,
bin in Test List Type Status,
wenn ich dort -none- auswähle, bekomme ich :
~~~
java.lang.NullP...
Andreas Kohlbecker
04:02 PM EDIT Revision 5fd9990b (cdmlib): fixing NPE in TypeDesignationStatusFilter processing when '- none -' is selected
Andreas Kohlbecker
04:01 PM EDIT Revision c50b9988 (cdm-vaadin): ref #8278 supporting two levels of inRefernces in init-strategies related to ellypsed reference comboboxes
Andreas Kohlbecker
03:26 PM EDIT feature request #8284: starting a registration for an existing name causes the name editor to pop up in read only mode
Im anderen Fall, nom-ref fehlt, lautet der letzte Satz: '*Click on "Save" to proceed with entering the typifications ... Andreas Kohlbecker
03:18 PM EDIT feature request #8284 (In Progress): starting a registration for an existing name causes the name editor to pop up in read only mode
Ok, verstanden!!!!
Dann ändere ich den Text so wie du es vorgeschlagen hast.
Andreas Kohlbecker
02:56 PM EDIT feature request #8284: starting a registration for an existing name causes the name editor to pop up in read only mode
> Click "Save" to start a type designation
verstehe ich das richtig? Der Dialog zur Auswahl der Type-Designation s...
Andreas Kohlbecker
02:35 PM EDIT feature request #8284: starting a registration for an existing name causes the name editor to pop up in read only mode
Wenn die Referenz fehlt kann nur diese und das Citation-Detail bearbeitet werden, dann speichert "Save" auch die Ände... Andreas Kohlbecker
02:11 PM EDIT feature request #8284: starting a registration for an existing name causes the name editor to pop up in read only mode
At the bottom of the editor an notification is shown for the user:
![](picture130-1.png)
Can we improve this te...
Andreas Kohlbecker
01:57 PM EDIT feature request #8284 (Feedback): starting a registration for an existing name causes the name editor to pop up in read only mode
it is always the name editor that pops up. This way the user can review the name before actually creating the registr... Andreas Kohlbecker
03:22 PM EDIT feature request #7610 (Feedback): Type search in PhycoBank Portal
Shall we close this ticket in favor of implementing #7966 which suggests a different solution which is exactly the sa... Andreas Kohlbecker
02:47 PM EDIT bug #8279 (Closed): ClassCastException in CdmUserHelper.user()
Andreas Kohlbecker
02:46 PM EDIT bug #8279 (Resolved): ClassCastException in CdmUserHelper.user()
Applied in changeset commit:cdmlib|b7723abf3053f0e9be6dae43c191048aa67729da. Andreas Kohlbecker
02:47 PM EDIT Revision c251b820 (cdm-vaadin): ref #8279 removing unused call to CdmUserHelper.user()
Andreas Kohlbecker
02:46 PM EDIT Revision 16dabe1c (cdmlib): fixing wording in logging
Andreas Kohlbecker
02:46 PM EDIT Revision b7723abf (cdmlib): fix #8279 avoiding ClassCastExceptin in CdmUserHelper
Andreas Kohlbecker
01:53 PM EDIT bug #8252: reference ellypsis must not be applied to all reference types
Would using the acronyms or truncating the names of the section authors to acronyms be helpful?
e.g.:
* Kulikowsy...
Andreas Kohlbecker
12:18 PM EDIT Revision ffbeace5 (cdm-dataportal): Merge tag '5.7.1' into develop
tagging version 5.7.1 Andreas Kohlbecker
12:18 PM EDIT Revision 4b239fc7 (cdm-dataportal): Merge branch 'hotfix/5.7.1'
Andreas Kohlbecker
12:17 PM EDIT Revision 64a5b05a (cdm-dataportal): Merge branch 'develop' into hotfix/5.7.1
Andreas Kohlbecker

05/16/2019

06:03 PM EDIT Wiki edit: DrupalDrushUpdate (#42)
Andreas Kohlbecker
06:03 PM EDIT Wiki edit: DrupalDrushUpdate (#41)
Andreas Kohlbecker
04:51 PM EDIT bug #8280 (Closed): polyfills folder check in zen_dataportal/theme-settings.php fails when portal is installed in subfolder
Andreas Kohlbecker
03:57 PM EDIT bug #8280 (Resolved): polyfills folder check in zen_dataportal/theme-settings.php fails when portal is installed in subfolder
Applied in changeset commit:cdm-dataportal|55a557d83c8145f8fcd3192f02001d2a9adb8b9c. Andreas Kohlbecker
03:55 PM EDIT bug #8280 (Closed): polyfills folder check in zen_dataportal/theme-settings.php fails when portal is installed in subfolder
In the http://cichorieae.e-taxonomy.net/portal/admin/appearance/settings/zen_dataportal the polyfills folder check re... Andreas Kohlbecker
03:57 PM EDIT Revision 55a557d8 (cdm-dataportal): fix #8280 fixing polyfills folder check for insrtallations in subfolders
Andreas Kohlbecker
02:54 PM EDIT Wiki edit: Release_Notes (#450)
Andreas Kohlbecker
02:46 PM EDIT bug #7896 (Closed): NPE, NullPointerException in RelationshipTermBase
It's fixed since http://api.cybertaxonomy.org/flora-malesiana/portal/taxon/09d427ff-a520-413e-b86b-e39abac29f52/synon... Andreas Kohlbecker
02:38 PM EDIT bug #7953: Book in BookSeries: incomplete titleCache misses series title
Hi Andreas this is your turn. Please see Hennings answer in comment !#10 Andreas Kohlbecker
02:36 PM EDIT feature request #8193 (Closed): TaxonNamePopupEditor: add select form element for Nomenclatural status
I don't have this little grey box in my status bar while typing. I think we should just ignore this little artifact a... Andreas Kohlbecker
02:20 PM EDIT bug #8050: Create blocking registrations for un-registered names which are to be used in nomenclatural acts
Hi Henning
i could not reproduce the problem that
> Genera imported for the taxon graph AND species eintered i...
Andreas Kohlbecker
02:11 PM EDIT bug #7881 (Closed): reference selection combobox broken after error in ...
the cascade="all-delete-orphan" problems did not occur again Andreas Kohlbecker
02:10 PM EDIT bug #8099 (Closed): Error saving name type designation editor due to problem in poupeditor context
the problem which augments other exceptions has been fixed, since further information on the root cause has been lost... Andreas Kohlbecker
02:01 PM EDIT bug #8160 (Closed): CdmBeanItemContainerFactory as readonly service bean
The implementation works as expected and the cascade="all-delete-orphan" problems did not occur again Andreas Kohlbecker
02:01 PM EDIT bug #8065 (Closed): HibernateException: corrupt session problem breaks SpecimenTypeDesignationworkingsetEditor type designation table
The implementation works as expected and the cascade="all-delete-orphan" problems did not occur again Andreas Kohlbecker
02:00 PM EDIT bug #8075 (Closed): multiple cascade all-delete-orphan exceptions related to DefinedTermBase.representations
the cascade="all-delete-orphan" problems did not occur again Andreas Kohlbecker
01:59 PM EDIT bug #8158 (Closed): cascade="all-delete-orphan" problem when ....
the cascade="all-delete-orphan" problems did not occur again Andreas Kohlbecker
01:50 PM EDIT Revision e43f8991 (cdm-vaadin): removing hard coded debug level from logger
Andreas Kohlbecker
01:48 PM EDIT bug #8279 (Closed): ClassCastException in CdmUserHelper.user()
found in the server log:
~~~
com.vaadin.server.ServerRpcManager$RpcInvocationException: Unable to invoke method c...
Andreas Kohlbecker
01:45 PM EDIT bug #8278 (Closed): LazyInitializationException (LIE) in ReferenceEllypsisCaptionGenerator
found in the server log
~~~
[phycobank] 2019-05-07 15:37:04,623 ERROR [qtp1207140081-35] [com.flowingcode.vaadin....
Andreas Kohlbecker
01:33 PM EDIT bug #8252: reference ellypsis must not be applied to all reference types
Wolf-Henning Kusber wrote:
> Ellipsis must not be applied to in-authors/nomenclatural author team.
> Example:
> ...
Andreas Kohlbecker
11:35 AM EDIT bug #8189: Allow configuration of 'user.home' via the spring environment
> The test ConfigFileUtilTest.testGetFolderSeperator does not work anymore on windows systems when running in maven
...
Andreas Kohlbecker

05/07/2019

02:04 PM EDIT Wiki edit: CdmSearchIndexMaintenance (#8)
Andreas Kohlbecker

05/06/2019

03:26 PM EDIT Revision 5cf2b1f1 (cdm-vaadin): ref #8193 fixing layout problem related to width nom status widget
Andreas Kohlbecker
10:51 AM EDIT Revision c9c5ab2b (cdm-vaadin): ref #8193 using abbreviated label for status types
Andreas Kohlbecker

04/30/2019

11:12 PM EDIT bug #8252 (Feedback): reference ellypsis must not be applied to all reference types
> All Titles are given fully up to a length of approx. 60 characters.
>
> This is okay (i) because the the title ca...
Andreas Kohlbecker
07:53 PM EDIT bug #8252 (Resolved): reference ellypsis must not be applied to all reference types
done! please review. Andreas Kohlbecker
03:13 PM EDIT bug #8252: reference ellypsis must not be applied to all reference types
I think the same accounts for book series etc.
the reference title cache ellypsis must not be applied to all refer...
Andreas Kohlbecker
11:10 PM EDIT bug #8250 (Closed): ReferenceEditor: inReference must not be required for type book
Andreas Kohlbecker
03:30 PM EDIT bug #8250: ReferenceEditor: inReference must not be required for type book
please review Andreas Kohlbecker
03:30 PM EDIT bug #8250 (Resolved): ReferenceEditor: inReference must not be required for type book
Applied in changeset commit:cdm-vaadin|80e7f7818a45beba837dadf4ef75837053efe2f0. Andreas Kohlbecker
11:09 PM EDIT bug #8251 (Closed): LazyInitializationException (LIE) in featureTree webservice
works now as expected Andreas Kohlbecker
11:33 AM EDIT bug #8251 (Closed): LazyInitializationException (LIE) in featureTree webservice
example request : http://api.cybertaxonomy.org/cichorieae/portal/featureTree.json?pageNumber=0&pageSize=500 Andreas Kohlbecker
07:54 PM EDIT bug #8220 (Closed): incomplete creation of blocking registration in case of registering existing name which misses the nomenclatural reference
Andreas Kohlbecker
09:03 AM EDIT bug #8220: incomplete creation of blocking registration in case of registering existing name which misses the nomenclatural reference
I solved all remaining issues, please review again. Andreas Kohlbecker
07:53 PM EDIT feature request #8193: TaxonNamePopupEditor: add select form element for Nomenclatural status
ready to be reviewed. Andreas Kohlbecker
03:06 PM EDIT feature request #8193 (Resolved): TaxonNamePopupEditor: add select form element for Nomenclatural status
Applied in changeset commit:cdm-vaadin|0aa1233b1d58610d498e17aeb13858211d09d49b. Andreas Kohlbecker
07:47 PM EDIT Revision 4724d189 (cdmlib): ref #8252 improving ReferenceEllypsisFormatter for print series and proceedings
Andreas Kohlbecker
04:15 PM EDIT Revision 6efa5535 (cdmlib): ref #8252 improving ReferenceEllypsisFormatter for journals and other references where the main information is in the title
Andreas Kohlbecker
03:30 PM EDIT Revision 80e7f781 (cdm-vaadin): fix #8250 RegistrationEditor inReference required only for Article Section BookSection InProceedings
Andreas Kohlbecker
03:06 PM EDIT Revision 0aa1233b (cdm-vaadin): fix #8193 ElementCollectionField to edit nomenclatural status in TaxonNamePopupEditor
Andreas Kohlbecker
03:05 PM EDIT Revision 3215b084 (cdmlib): ref #8193 collection setter for TaxonName.status
Andreas Kohlbecker

04/29/2019

05:01 PM EDIT Revision cca5f235 (cdm-vaadin): ref #8220 editing exististing names for new regitration: citation detail enabled, section only restriction disabled
Andreas Kohlbecker
04:06 PM EDIT Revision 464346c5 (cdmlib): removing debuging code line
Andreas Kohlbecker
04:05 PM EDIT feature request #7965: Registration search simplify type select options
please review once the test server is updated Andreas Kohlbecker
04:04 PM EDIT feature request #7965 (Resolved): Registration search simplify type select options
Applied in changeset commit:cdm-vaadin|4656c3e23541b17c233d565d4ff02c0053b335f2. Andreas Kohlbecker
04:04 PM EDIT Revision 4656c3e2 (cdm-vaadin): fix #7965 using the TypeDesignationStatusFilter elements to simplify the type filter select
Andreas Kohlbecker
04:03 PM EDIT Revision 72312cbc (cdmlib): ref #7965 methods to get typeDesignationStatusInUse as term an as filter object
Andreas Kohlbecker
 

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