edit-jenkins [Fri, 24 Jan 2014 12:59:04 +0000 (12:59 +0000)]
Updated version in config files to 3.3.1-SNAPSHOT
Patric Plitzner [Wed, 22 Jan 2014 15:28:36 +0000 (15:28 +0000)]
- removed specific source code path
Patric Plitzner [Wed, 22 Jan 2014 09:57:31 +0000 (09:57 +0000)]
merged campanula branch to trunk. Main features are: BioCase Query via Imports, Derivate Search View, Derivate (Hierarchy) View, Derivate perspective, type-specific DetailsViews for specimens
Patric Plitzner [Tue, 21 Jan 2014 15:03:58 +0000 (15:03 +0000)]
merge-update from trunk
Patric Plitzner [Tue, 21 Jan 2014 14:52:08 +0000 (14:52 +0000)]
- added AbstractUnboundEntityCollectionSection which allows adding elements to collection sections without adding them to the model object
Patric Plitzner [Tue, 21 Jan 2014 08:34:38 +0000 (08:34 +0000)]
merge-update from trunk
Patric Plitzner [Tue, 21 Jan 2014 08:33:00 +0000 (08:33 +0000)]
- added cdmlib sources
Patric Plitzner [Tue, 21 Jan 2014 08:30:28 +0000 (08:30 +0000)]
- partly fixed sequence reference collection section
Patric Plitzner [Mon, 20 Jan 2014 14:57:35 +0000 (14:57 +0000)]
- added java package for different occurrence/specimen types
- moved "show field unit" option to "Bulk Editor" preference page
- added preference to show only type-specific details views for specimens
Patric Plitzner [Mon, 20 Jan 2014 08:58:58 +0000 (08:58 +0000)]
merge-update fixes
Patric Plitzner [Mon, 20 Jan 2014 08:51:06 +0000 (08:51 +0000)]
merge-update from trunk
Patric Plitzner [Mon, 20 Jan 2014 08:12:36 +0000 (08:12 +0000)]
- added separate section for primer and cloning
- removed "null" message in data source conversion dialog
edit-jenkins [Thu, 16 Jan 2014 09:14:35 +0000 (09:14 +0000)]
Updated version in config files to 3.3.0
Patric Plitzner [Wed, 15 Jan 2014 10:54:06 +0000 (10:54 +0000)]
- updated "update datasource" message popup
Patric Plitzner [Wed, 15 Jan 2014 08:07:31 +0000 (08:07 +0000)]
- updated "update datasource" message popup
Andreas Müller [Tue, 14 Jan 2014 22:18:53 +0000 (22:18 +0000)]
fix missing publish flag for synonyms
Patric Plitzner [Tue, 14 Jan 2014 16:15:13 +0000 (16:15 +0000)]
merge-update from trunk
Patric Plitzner [Tue, 14 Jan 2014 16:01:08 +0000 (16:01 +0000)]
fix for #3557
- reactivated details view for taxon relationships
- added doubtful flag
Patric Plitzner [Tue, 14 Jan 2014 14:34:29 +0000 (14:34 +0000)]
- also allow *.xlsx and *.* for Excel import (fixes #3657)
Patric Plitzner [Tue, 14 Jan 2014 14:06:51 +0000 (14:06 +0000)]
- set recordBasis according to selecting in context menu (fixes #3753)
Andreas Müller [Tue, 14 Jan 2014 12:31:07 +0000 (12:31 +0000)]
change ICBN to ICNAFP in manual #3745
Cherian Mathew [Tue, 14 Jan 2014 11:45:03 +0000 (11:45 +0000)]
workaround for release 3.3.0 related to ticket 3828 forcing SHOULD_CONNECT_AT_STARTUP to always be false.
Patric Plitzner [Tue, 14 Jan 2014 07:36:35 +0000 (07:36 +0000)]
- fixed potential NPEs in Amplification DetailsView
Patric Plitzner [Mon, 13 Jan 2014 07:53:47 +0000 (07:53 +0000)]
- added reference collection section to Sequence DetailsView
- implemented handleEvent() for some DetailsViews
Patric Plitzner [Wed, 8 Jan 2014 16:32:50 +0000 (16:32 +0000)]
merge-update from trunk
Patric Plitzner [Wed, 8 Jan 2014 16:13:13 +0000 (16:13 +0000)]
- added startNumber to PolytomousKey DetailsView (fixes #3563)
Patric Plitzner [Wed, 8 Jan 2014 15:33:51 +0000 (15:33 +0000)]
- added idInVocabulary to DefinedTerm DetailsView (#3542)
Patric Plitzner [Wed, 8 Jan 2014 14:08:06 +0000 (14:08 +0000)]
added hardcoded base layer "earth" (#3941)
Patric Plitzner [Wed, 8 Jan 2014 14:07:31 +0000 (14:07 +0000)]
changed tooltip to "factual data"
Patric Plitzner [Wed, 8 Jan 2014 10:02:27 +0000 (10:02 +0000)]
- changed default map service access point (fixes #3941)
Patric Plitzner [Tue, 7 Jan 2014 08:00:15 +0000 (08:00 +0000)]
- added elements for Sequence/Amplification/SingleRead DetailsView
Patric Plitzner [Mon, 6 Jan 2014 16:49:12 +0000 (16:49 +0000)]
- added reference selection to Sequence DetailsView
Patric Plitzner [Mon, 6 Jan 2014 14:36:01 +0000 (14:36 +0000)]
- added element for Sequence DetailsView
Patric Plitzner [Mon, 6 Jan 2014 12:36:15 +0000 (12:36 +0000)]
- added support for creating and viewing SingleReads in DerivateView
- added DetailsViews for SingleReads
Patric Plitzner [Mon, 6 Jan 2014 09:56:30 +0000 (09:56 +0000)]
merge-update from trunk
Patric Plitzner [Mon, 6 Jan 2014 09:50:48 +0000 (09:50 +0000)]
- added Amplification and Sequence to DerivateView
- added context menu entry for the creation of both
- added DetailsViews for both
Patric Plitzner [Wed, 18 Dec 2013 15:37:34 +0000 (15:37 +0000)]
- added Amplifications and Seuqences (consensus) to derivate hierarchy (DerivateView)
Patric Plitzner [Wed, 18 Dec 2013 08:53:17 +0000 (08:53 +0000)]
- adapted to trunk-merge changes
Patric Plitzner [Wed, 18 Dec 2013 08:49:10 +0000 (08:49 +0000)]
merge-update from trunk
Andreas Kohlbecker [Wed, 18 Dec 2013 08:44:14 +0000 (08:44 +0000)]
adapting to method signature change
Patric Plitzner [Wed, 18 Dec 2013 07:51:37 +0000 (07:51 +0000)]
- added amplification section to DNA DetailsView
Patric Plitzner [Tue, 17 Dec 2013 15:06:25 +0000 (15:06 +0000)]
- added DetailsView for PreservedSpecimen which directly work with DerivedUnit instead of DerivedUnitFacade (new classes work in parallel to the ones using DerivedUnitFacades and start with "PreservedSpecimen")
Patric Plitzner [Tue, 17 Dec 2013 08:03:58 +0000 (08:03 +0000)]
- added specific DetailsViews that are not based on DerivedUnitFacade for DNA and specimens
Patric Plitzner [Tue, 17 Dec 2013 08:03:13 +0000 (08:03 +0000)]
- added preliminary method for getting specimen by type/record basis (needs enhancement with direct SQL queries)
Patric Plitzner [Mon, 16 Dec 2013 14:07:52 +0000 (14:07 +0000)]
- added a flag to force also searching for FieldUnits when searching occurrences
Patric Plitzner [Mon, 16 Dec 2013 09:39:25 +0000 (09:39 +0000)]
- updated DerivateSearchView and DerivateView icon
Patric Plitzner [Mon, 16 Dec 2013 08:57:16 +0000 (08:57 +0000)]
- updated DerivateSearchView icon
Patric Plitzner [Mon, 16 Dec 2013 07:54:13 +0000 (07:54 +0000)]
- added empty DetailViews for all derivate types
Patric Plitzner [Mon, 16 Dec 2013 07:53:40 +0000 (07:53 +0000)]
- added derivate types to DerivateSearchView combo
Patric Plitzner [Mon, 16 Dec 2013 07:52:56 +0000 (07:52 +0000)]
- fixed bug when creating another DescriptionElement
Patric Plitzner [Wed, 11 Dec 2013 14:38:35 +0000 (14:38 +0000)]
- enhanced DNA icon
- enhanced context menu for derivate creation
Patric Plitzner [Wed, 11 Dec 2013 10:46:32 +0000 (10:46 +0000)]
- fixed session problems by using just the UUID of the derivate from the DerivateSearchView, passing it to the DerivateViewEditorInput and start the conversation in the EditorInput. All other objects will then be created in the same conversation/session
Patric Plitzner [Wed, 11 Dec 2013 10:41:13 +0000 (10:41 +0000)]
- removed incorrect cdmlib dependencies
Patric Plitzner [Tue, 10 Dec 2013 15:06:02 +0000 (15:06 +0000)]
- added icons for derivate views
- enhanced DerivateViewEditorInput handling
Patric Plitzner [Tue, 10 Dec 2013 09:04:11 +0000 (09:04 +0000)]
- added "Derivates" perspective
- enhanced selections and icons for derivate views
Patric Plitzner [Mon, 9 Dec 2013 14:47:38 +0000 (14:47 +0000)]
- added icons
- added error handling
Patric Plitzner [Mon, 9 Dec 2013 13:26:22 +0000 (13:26 +0000)]
- fixed derivate icons
- fixed possible NPE
Patric Plitzner [Mon, 9 Dec 2013 13:02:57 +0000 (13:02 +0000)]
merge-update from trunk
Patric Plitzner [Mon, 9 Dec 2013 13:02:32 +0000 (13:02 +0000)]
- added derivate icons
- adapted transient interface
Patric Plitzner [Mon, 9 Dec 2013 09:36:25 +0000 (09:36 +0000)]
- Changed DerivateViewEditorInput to hold the FieldUnit itself
- added icons to ImageResources
Andreas Kohlbecker [Fri, 6 Dec 2013 11:58:51 +0000 (11:58 +0000)]
adapting to new method signature of getDistributionServiceRequestParameterString()
Katja Luther [Thu, 5 Dec 2013 13:33:37 +0000 (13:33 +0000)]
#3877
Patric Plitzner [Wed, 4 Dec 2013 15:12:11 +0000 (15:12 +0000)]
- added icons to derivates in DerivateView
Patric Plitzner [Wed, 4 Dec 2013 14:44:15 +0000 (14:44 +0000)]
- extracted AbstractDescriptionPostOperation to be super class of Create Specimen/Taxon DescriptionOperation
- adapted CreateDescriptionHandler to changes
- fixed refresh of factual data view after creating specimen description
Patric Plitzner [Wed, 4 Dec 2013 08:34:15 +0000 (08:34 +0000)]
- adapted sub classes of AbstractPostOperation
Patric Plitzner [Tue, 3 Dec 2013 14:44:59 +0000 (14:44 +0000)]
- extracted super class from AbstractPostOperation (same name)
- created sub class AbstractPost Taxon/Describable Operation
Patric Plitzner [Tue, 3 Dec 2013 14:11:29 +0000 (14:11 +0000)]
merge-update from trunk
Patric Plitzner [Tue, 3 Dec 2013 14:04:28 +0000 (14:04 +0000)]
- enabled DescriptiveView (Factual Data) to show descriptions of SpecimenOrObservationBase
Patric Plitzner [Tue, 3 Dec 2013 10:35:55 +0000 (10:35 +0000)]
- fix for #3849 (mark view dirty for changes on FieldUnits)
Patric Plitzner [Tue, 3 Dec 2013 10:20:50 +0000 (10:20 +0000)]
merge-update from trunk
Patric Plitzner [Mon, 2 Dec 2013 12:09:31 +0000 (12:09 +0000)]
merge-update from trunk\nadded throws to delete methods of transient services
Patric Plitzner [Mon, 2 Dec 2013 12:00:52 +0000 (12:00 +0000)]
merge-update from trunk
Katja Luther [Mon, 2 Dec 2013 11:55:22 +0000 (11:55 +0000)]
delete whole classification with children
Katja Luther [Thu, 28 Nov 2013 11:09:17 +0000 (11:09 +0000)]
minor
Andreas Müller [Wed, 27 Nov 2013 21:17:02 +0000 (21:17 +0000)]
Changed label for Descriptive View and Menus => Factual Data #3863
Andreas Müller [Wed, 27 Nov 2013 20:47:21 +0000 (20:47 +0000)]
Changed label for Descriptive View => Factual Data #3863
Andreas Müller [Wed, 27 Nov 2013 19:20:02 +0000 (19:20 +0000)]
update some logging
Patric Plitzner [Wed, 27 Nov 2013 16:36:58 +0000 (16:36 +0000)]
- Fixed the creation of a single FieldUnit via context-menu in the bulk editor which was creating two instead
- added wizard for FieldUnit creation
Patric Plitzner [Wed, 27 Nov 2013 12:36:26 +0000 (12:36 +0000)]
merge-update from trunk
Patric Plitzner [Wed, 27 Nov 2013 12:08:55 +0000 (12:08 +0000)]
- unified DerivateLabelProvider
Patric Plitzner [Wed, 27 Nov 2013 08:02:02 +0000 (08:02 +0000)]
- added functionality to context menu for derivate creation
- fixed a bug where two FieldUnits were created instead of only on
- added javadoc
Patric Plitzner [Tue, 26 Nov 2013 13:54:42 +0000 (13:54 +0000)]
- added "isDirty" functionality to DerivateView to allow saving of edited derivates
Patric Plitzner [Tue, 26 Nov 2013 11:02:07 +0000 (11:02 +0000)]
- added getter for combo element
- added setEnable() method for DerivateSearchCompositeController
Patric Plitzner [Tue, 26 Nov 2013 10:53:20 +0000 (10:53 +0000)]
- fixed selection of DerivateSearch result table
- double-click now opens DerivateView
Katja Luther [Tue, 26 Nov 2013 09:03:22 +0000 (09:03 +0000)]
#3897
Patric Plitzner [Tue, 26 Nov 2013 08:29:03 +0000 (08:29 +0000)]
- linked DerivateSearch with DerivateView via double-click (selection does not yet work)
Patric Plitzner [Tue, 26 Nov 2013 08:27:35 +0000 (08:27 +0000)]
- removed list of DerivedUnits from EditorInput to make it more light-weight
Patric Plitzner [Tue, 26 Nov 2013 07:59:07 +0000 (07:59 +0000)]
merge-update from trunk
Patric Plitzner [Mon, 25 Nov 2013 14:43:10 +0000 (14:43 +0000)]
- added DerivateSearchView
Patric Plitzner [Mon, 25 Nov 2013 07:46:33 +0000 (07:46 +0000)]
- removed usage of compatibility interface IEntitySelectionElement
Patric Plitzner [Mon, 25 Nov 2013 07:44:26 +0000 (07:44 +0000)]
- quick-fix for DerivateView: always create a FieldUnit when creating a DerivedUnitFacade because a FieldUnit is needed as the root of the hierarchy
Katja Luther [Wed, 20 Nov 2013 09:42:15 +0000 (09:42 +0000)]
add real deletion of polytomouskeynodes
Patric Plitzner [Wed, 20 Nov 2013 08:13:49 +0000 (08:13 +0000)]
- removed "hexagesimal" (fixes #3879)
Patric Plitzner [Wed, 20 Nov 2013 08:13:03 +0000 (08:13 +0000)]
- derivates now show the correct type (record basis) in the bulk editor
Patric Plitzner [Tue, 19 Nov 2013 14:54:06 +0000 (14:54 +0000)]
merge-update from trunk
Patric Plitzner [Tue, 19 Nov 2013 14:52:52 +0000 (14:52 +0000)]
- fixed NPE
Patric Plitzner [Tue, 19 Nov 2013 07:42:46 +0000 (07:42 +0000)]
- added missing wizard pages from trunk
Patric Plitzner [Mon, 18 Nov 2013 14:17:08 +0000 (14:17 +0000)]
merge-update of trunk and disabling GUI-Control separation
Patric Plitzner [Mon, 18 Nov 2013 09:16:03 +0000 (09:16 +0000)]
- added supportsCommonTaxonName checkbox to FeatureDetailElement (#3207)
Andreas Müller [Fri, 15 Nov 2013 17:04:23 +0000 (17:04 +0000)]
maybe deproxy solves #3889