Patric Plitzner [Wed, 21 May 2014 07:44:29 +0000 (07:44 +0000)]
- wrapped DerivateView selection to pass a handle on one DerivateView when dragging into another allowing refresh on that view
Patric Plitzner [Wed, 21 May 2014 07:43:39 +0000 (07:43 +0000)]
- refactored BioCaseQuery to more generic OccurrenceQuery
- for import wizard
- for DataImportEditor
- exported new cdmlib package structure for gbif and biocase querying in taxeditor.cdmlib
Andreas Müller [Tue, 20 May 2014 16:57:15 +0000 (16:57 +0000)]
fix TransienTaxonService
Andreas Müller [Tue, 20 May 2014 11:12:31 +0000 (11:12 +0000)]
update new generic services in TaxEditor #4224
Patric Plitzner [Tue, 20 May 2014 10:01:16 +0000 (10:01 +0000)]
- Increased version number in .classpath file (should be done automatically by maven)
Andreas Müller [Thu, 15 May 2014 16:26:36 +0000 (16:26 +0000)]
fix NPE in GroupBasionymContributionItem
Andreas Müller [Thu, 15 May 2014 15:59:06 +0000 (15:59 +0000)]
fix NPE for unselected feature tree
Andreas Müller [Thu, 15 May 2014 12:52:40 +0000 (12:52 +0000)]
fix transient term service
edit-jenkins [Wed, 14 May 2014 11:22:51 +0000 (11:22 +0000)]
Updated version in config files to 3.3.5-SNAPSHOT
edit-jenkins [Wed, 14 May 2014 11:16:16 +0000 (11:16 +0000)]
Updated version in config files to 3.3.4
Patric Plitzner [Wed, 14 May 2014 08:09:09 +0000 (08:09 +0000)]
- reverted unwanted merge of branch code
Patric Plitzner [Wed, 14 May 2014 07:18:25 +0000 (07:18 +0000)]
- only allow dragging in DerivateView when view is not dirty
- added missing methods to transient services
- exposed dto package in cdmlib project
- some renaming
Patric Plitzner [Tue, 13 May 2014 15:02:00 +0000 (15:02 +0000)]
- minor refactoring
Patric Plitzner [Tue, 13 May 2014 13:55:29 +0000 (13:55 +0000)]
- disabling event handling for DetailsView of TissueSample
Cherian Mathew [Tue, 13 May 2014 10:29:26 +0000 (10:29 +0000)]
setting name in case of editing datasource
Patric Plitzner [Thu, 8 May 2014 08:35:31 +0000 (08:35 +0000)]
- fixed toggling of title cache lock
Cherian Mathew [Thu, 8 May 2014 08:30:39 +0000 (08:30 +0000)]
remmoved setting of database name to empty when cloning
Andreas Müller [Wed, 7 May 2014 15:07:28 +0000 (15:07 +0000)]
make lineSeparator 1.6 compatibel again
Cherian Mathew [Wed, 7 May 2014 08:59:07 +0000 (08:59 +0000)]
added new constructor with mode argument for wizard pages and deprecated the old constructor.
CdmDataSourceWizard and CdmDataSourceTypeSelectionWizardPage now call the new constructor.
Cherian Mathew [Tue, 6 May 2014 14:54:38 +0000 (14:54 +0000)]
refactoring to cdm source
Cherian Mathew [Tue, 6 May 2014 14:53:28 +0000 (14:53 +0000)]
refactoring cdm data source to cdm source
plugin.xml : added clone menu item / command
Cherian Mathew [Tue, 6 May 2014 14:45:58 +0000 (14:45 +0000)]
.classpath : added test resources in classpath
CdmPersistentRemoteSourceTest : added new tests for remote source connection
CdmRemoteSourceBase : added code to connect to the target database (before initialising the full application context) to retrieve metadata
CdmRemoteSource, CdmPersistentRemoteSource : added required methods
remotingApplicationContext : optimisations
Cherian Mathew [Tue, 6 May 2014 14:37:45 +0000 (14:37 +0000)]
refactored wizard dialog and pages to allow for easy in place editing and cloning of datasources.
CdmDataSourceRepository : added methods for (I)PersistentRemoteSource
Cherian Mathew [Tue, 6 May 2014 14:32:28 +0000 (14:32 +0000)]
refactoring to change the specific (I)CdmDataSource to the more generic (I)CdmSource to prepare fro remoting
CloneDataSourceHandler : new handler to clone a datasource
Katja Luther [Mon, 5 May 2014 13:01:16 +0000 (13:01 +0000)]
adding a taxon bulk editor and changes because the delete methods does not throw exceptions anymore
Patric Plitzner [Tue, 29 Apr 2014 13:55:58 +0000 (13:55 +0000)]
- simplified showParts() method in DetailsViewer for showing empty page
Patric Plitzner [Wed, 23 Apr 2014 12:27:23 +0000 (12:27 +0000)]
- increased cdmlib version number in .classpath file to 3.3.4
edit-jenkins [Wed, 16 Apr 2014 15:26:36 +0000 (15:26 +0000)]
Updated version in config files to 3.3.4-SNAPSHOT
edit-jenkins [Wed, 16 Apr 2014 15:21:57 +0000 (15:21 +0000)]
Updated version in config files to 3.3.3
Patric Plitzner [Tue, 15 Apr 2014 08:20:04 +0000 (08:20 +0000)]
- renamed TextWithLabelElement to avoid import/name conflicts (ma be renamed if we fully refactor using MVC pattern)
Patric Plitzner [Tue, 15 Apr 2014 08:18:09 +0000 (08:18 +0000)]
- removed unused PropertyTester
Patric Plitzner [Tue, 15 Apr 2014 08:14:22 +0000 (08:14 +0000)]
- added interfaces and classes for MVC pattern
- implemented/adapted MVC pattern for TextWithLabelElement and EnumTermCombo element
Patric Plitzner [Tue, 15 Apr 2014 07:19:21 +0000 (07:19 +0000)]
- fixed FactualData view to show data for selection of DerivateView
- renamed util method
edit-jenkins [Fri, 11 Apr 2014 15:37:16 +0000 (15:37 +0000)]
Updated version in config files to 3.3.3-SNAPSHOT
edit-jenkins [Fri, 11 Apr 2014 15:30:18 +0000 (15:30 +0000)]
Updated version in config files to 3.3.2
Patric Plitzner [Thu, 10 Apr 2014 06:38:49 +0000 (06:38 +0000)]
- commented "Original Label Data" text field because it is not yet used in trunk
Cherian Mathew [Wed, 9 Apr 2014 14:23:23 +0000 (14:23 +0000)]
CdmStore : no longer need to set configuration in hibernate classes here
CdmStoreConnector : new method to retrieve configuration based on cdm source type
Cherian Mathew [Wed, 9 Apr 2014 14:19:16 +0000 (14:19 +0000)]
CdmPersistentRemoteSource : implemented all source methods including save and delete
CdmRemoteSourceException : new exception to deal with cdm source errors
CdmRemoteSourceBase : added default constructor
Cherian Mathew [Wed, 9 Apr 2014 14:16:59 +0000 (14:16 +0000)]
CdmApplicationRemoteController : directly loads CdmApplicationRemoteConfiguration bean and sets configuration in hibernate classes
CdmApplicationRemoteConfiguration : no longer need the bean name hack due to update in CdmApplicationRemoteController
Cherian Mathew [Wed, 9 Apr 2014 14:15:16 +0000 (14:15 +0000)]
isRemoting is no longer based on a bean in the application context, but
the type of cdm source
Cherian Mathew [Wed, 9 Apr 2014 14:13:46 +0000 (14:13 +0000)]
isRemoting is no longer based on a bean in the application context, but
the type of cdm source
Cherian Mathew [Wed, 9 Apr 2014 14:09:21 +0000 (14:09 +0000)]
cdm.datasources.xml : added test sources settings file
CdmRemoteSourceTest, RemoteLazyLoadingTest : updated tests
HttpInvokerServicesTest, CdmPersistentRemoteSourceTest, CdmApplicationRemoteControllerTest : new test classes for remoting
RemoteApplicationConfigurationTest : no longer a real test, but a super class for remote tests
Patric Plitzner [Wed, 9 Apr 2014 08:15:26 +0000 (08:15 +0000)]
- fixed link to online svn repo
Patric Plitzner [Tue, 8 Apr 2014 06:53:41 +0000 (06:53 +0000)]
- added memento restore mechanism to DerivateView (partially)
Patric Plitzner [Tue, 8 Apr 2014 06:53:11 +0000 (06:53 +0000)]
- set default derivate typ filter to "unknown"
Patric Plitzner [Tue, 8 Apr 2014 06:52:45 +0000 (06:52 +0000)]
- javadoc
Patric Plitzner [Mon, 7 Apr 2014 11:11:39 +0000 (11:11 +0000)]
- refresh view instead of setting the editor input
Patric Plitzner [Mon, 7 Apr 2014 09:43:10 +0000 (09:43 +0000)]
- cleaned DerivateView context menu code and classes
Patric Plitzner [Mon, 7 Apr 2014 09:42:22 +0000 (09:42 +0000)]
- partially added handling of input fields
Cherian Mathew [Fri, 4 Apr 2014 16:09:47 +0000 (16:09 +0000)]
added new remote package
Cherian Mathew [Fri, 4 Apr 2014 15:42:38 +0000 (15:42 +0000)]
comments and javadoc
Cherian Mathew [Fri, 4 Apr 2014 09:42:25 +0000 (09:42 +0000)]
removed repeated call to get all cdm sources
Cherian Mathew [Fri, 4 Apr 2014 09:41:10 +0000 (09:41 +0000)]
updating to align with refactored cdm source classes / interfaces
Cherian Mathew [Fri, 4 Apr 2014 09:28:07 +0000 (09:28 +0000)]
Adding CDM Remote Source set of classes to allow editor to connect to a remote cdmserver
Cherian Mathew [Fri, 4 Apr 2014 09:27:04 +0000 (09:27 +0000)]
CdmApplicationRemoteConfiguration : removed spring bean name hack, since we now have a new controller
CdmApplicationRemoteController : new Controller class to handle remoting
AbstractLazyInitializer / AbstractPersistentCollection : added missing methods to check if proxy object is initialized
CdmRemoteSourceTest : Added new test class to test the CDM Remote Source
httpInvokerServiceClients.xml : added primer service
Patric Plitzner [Wed, 2 Apr 2014 14:08:30 +0000 (14:08 +0000)]
- refactored context menu for DerivateView to be programmatic instead of declarative (using plugin.xml)
- fixed icon bug for DerivateSearchView
Patric Plitzner [Wed, 2 Apr 2014 11:01:53 +0000 (11:01 +0000)]
- only show Copy/Paste context menu for SingleRead/Sequence
Patric Plitzner [Wed, 2 Apr 2014 09:37:31 +0000 (09:37 +0000)]
- added update() method to DerivateView
- display different icon for SingleReads linked to multiple Sequences
Patric Plitzner [Wed, 2 Apr 2014 07:55:16 +0000 (07:55 +0000)]
- added util method to get the TreeNode out of a selection
Patric Plitzner [Tue, 1 Apr 2014 15:14:26 +0000 (15:14 +0000)]
- added Copy/Paste for SingleRead->Sequence to DerivateView
- copying actually just creates a link
Patric Plitzner [Tue, 1 Apr 2014 08:03:12 +0000 (08:03 +0000)]
- fixed user message
Patric Plitzner [Tue, 1 Apr 2014 07:44:46 +0000 (07:44 +0000)]
- added gel photo detail element to Amplification wizard
Patric Plitzner [Tue, 1 Apr 2014 06:51:22 +0000 (06:51 +0000)]
- removed Amplification as a TreeNode from the DerivateView
- added Amplification to DetailsView of SingleRead as an EntitySelectionElement
Patric Plitzner [Tue, 1 Apr 2014 06:49:18 +0000 (06:49 +0000)]
- fixed javadoc
Patric Plitzner [Mon, 31 Mar 2014 12:19:33 +0000 (12:19 +0000)]
- organize imports for new molecular services
Patric Plitzner [Mon, 31 Mar 2014 12:19:17 +0000 (12:19 +0000)]
- fix cdmlib version number in .classpath (why does maven not generate this anymore?)
- added "molecular" package to exported packages
- organize imports for new molecular services
Patric Plitzner [Mon, 31 Mar 2014 08:10:36 +0000 (08:10 +0000)]
- used "move derivate" methods of service layer
- added java doc
edit-jenkins [Fri, 28 Mar 2014 17:01:09 +0000 (17:01 +0000)]
Updated version in config files to 3.3.2-SNAPSHOT
edit-jenkins [Fri, 28 Mar 2014 16:28:13 +0000 (16:28 +0000)]
Updated version in config files to 3.3.1
Patric Plitzner [Wed, 26 Mar 2014 14:37:30 +0000 (14:37 +0000)]
- moved move-logic to occurrence service layer
Patric Plitzner [Wed, 26 Mar 2014 12:35:41 +0000 (12:35 +0000)]
- reset input fields of DerivateSearchView when context stops
Patric Plitzner [Wed, 26 Mar 2014 07:39:46 +0000 (07:39 +0000)]
- added drag'n'drop support for Sequences
- added context listener to DerivateSearchView
- refactored MVC pattern of DerivateSearchView
Patric Plitzner [Tue, 25 Mar 2014 16:08:44 +0000 (16:08 +0000)]
- added support for SingleRead drag'n'drop
Patric Plitzner [Tue, 25 Mar 2014 13:30:25 +0000 (13:30 +0000)]
- implemented drag'n'drop support for SpecimenOrObservationBase in Derivate View
Patric Plitzner [Tue, 25 Mar 2014 08:35:04 +0000 (08:35 +0000)]
- minor
Patric Plitzner [Mon, 24 Mar 2014 15:10:51 +0000 (15:10 +0000)]
- minor enhancement
Patric Plitzner [Mon, 24 Mar 2014 13:24:08 +0000 (13:24 +0000)]
- added timeout to internet availability check
Patric Plitzner [Mon, 24 Mar 2014 13:23:36 +0000 (13:23 +0000)]
- fixed ClassCastException for FeatureNodeContainers
Patric Plitzner [Mon, 24 Mar 2014 10:39:36 +0000 (10:39 +0000)]
- added basic drag'n'drop support to DerivateView
Cherian Mathew [Thu, 20 Mar 2014 15:20:24 +0000 (15:20 +0000)]
added more tests for both lazy loading entities and collections
Andreas Kohlbecker [Thu, 20 Mar 2014 15:06:18 +0000 (15:06 +0000)]
adding missing methods
Katja Luther [Thu, 20 Mar 2014 12:51:00 +0000 (12:51 +0000)]
#4114 sort order in taxon navigator
Patric Plitzner [Wed, 19 Mar 2014 14:53:56 +0000 (14:53 +0000)]
- fixed class cast exception resulting from TreeNodes of DerivateView
Patric Plitzner [Wed, 19 Mar 2014 14:45:36 +0000 (14:45 +0000)]
- added context menu for TissueSample in DerivateView
Katja Luther [Tue, 18 Mar 2014 13:15:06 +0000 (13:15 +0000)]
while fixing a bug, revert the setting of the comparator.
Andreas Kohlbecker [Mon, 17 Mar 2014 22:03:05 +0000 (22:03 +0000)]
taxeditor part of fix for #4121 (Changing password does not work)
Andreas Kohlbecker [Mon, 17 Mar 2014 22:03:02 +0000 (22:03 +0000)]
avoiding problems which where due to a fix for ticket #3822
Katja Luther [Mon, 17 Mar 2014 12:50:59 +0000 (12:50 +0000)]
with the fixed compareTo method the TaxonNodeComparator should work (#4114)
Patric Plitzner [Mon, 17 Mar 2014 09:02:41 +0000 (09:02 +0000)]
- added isEnabled() method to IEnableableFormElement
Patric Plitzner [Mon, 17 Mar 2014 08:58:10 +0000 (08:58 +0000)]
- added missing interface method
Patric Plitzner [Mon, 17 Mar 2014 08:43:08 +0000 (08:43 +0000)]
- removed StoreUtil.getCdmEntity() invocation (#4091)
Patric Plitzner [Mon, 17 Mar 2014 07:54:29 +0000 (07:54 +0000)]
- fixed context menu options
Patric Plitzner [Mon, 17 Mar 2014 07:51:57 +0000 (07:51 +0000)]
- implemented EntitySelectionElement for Primer
- adapted details views with primer selection element
Patric Plitzner [Mon, 17 Mar 2014 07:50:39 +0000 (07:50 +0000)]
- added missing interface method
Andreas Kohlbecker [Fri, 14 Mar 2014 13:52:45 +0000 (13:52 +0000)]
implementing #4120: User always needs to have the right to change password and hiding all user related menu contributions if no user is logged in
Andreas Kohlbecker [Fri, 14 Mar 2014 13:52:41 +0000 (13:52 +0000)]
Revert "#4114 sort order in taxon navigator " to avoid blocking bug
This reverts commit
1ef7ab55c5d437aba039bc10ee8d81e12f402309.
Cherian Mathew [Thu, 13 Mar 2014 21:24:09 +0000 (21:24 +0000)]
adding missing manifest file
Cherian Mathew [Thu, 13 Mar 2014 20:23:45 +0000 (20:23 +0000)]
setting application configuration and boolean remoting flag (bean) in hibernate proxy classes to differentiate local and remoting
Andreas Kohlbecker [Thu, 13 Mar 2014 15:51:44 +0000 (15:51 +0000)]
after review final modification for #4115 ('editor' users cannot create new references via the reference select list)
Andreas Kohlbecker [Thu, 13 Mar 2014 15:09:15 +0000 (15:09 +0000)]
implementing #4123 (add idInVocabulary to term labels in editor)