taxeditor.git
8 years agofixed ticket #3763
Alexander Oppermann [Tue, 9 Dec 2014 13:37:43 +0000 (13:37 +0000)]
fixed ticket #3763

8 years agofixed ticket #1639
Alexander Oppermann [Tue, 9 Dec 2014 12:04:14 +0000 (12:04 +0000)]
fixed ticket #1639

8 years ago(no commit message)
Katja Luther [Mon, 8 Dec 2014 12:49:14 +0000 (12:49 +0000)]

8 years ago(no commit message)
Katja Luther [Mon, 8 Dec 2014 12:29:54 +0000 (12:29 +0000)]

8 years ago(no commit message)
Katja Luther [Mon, 8 Dec 2014 12:11:56 +0000 (12:11 +0000)]

8 years ago(no commit message)
Katja Luther [Mon, 8 Dec 2014 09:09:22 +0000 (09:09 +0000)]

8 years ago - reverted to previous version due to compilation error
Patric Plitzner [Thu, 4 Dec 2014 16:53:36 +0000 (16:53 +0000)]
 - reverted to previous version due to compilation error

8 years ago - added service method to get descriptions which have a specimen set as describedSpe...
Patric Plitzner [Thu, 4 Dec 2014 15:00:20 +0000 (15:00 +0000)]
 - added service method to get descriptions which have a specimen set as describedSpecimen
 - added test which fails because the XML is loaded incorrectly

8 years ago - added delete result as warn message
Patric Plitzner [Thu, 4 Dec 2014 14:30:13 +0000 (14:30 +0000)]
 - added delete result as warn message

8 years agofix drag&drop for synonyms to another accepted taxon
Katja Luther [Thu, 4 Dec 2014 13:15:08 +0000 (13:15 +0000)]
fix drag&drop for synonyms to another accepted taxon

8 years ago - fixed ClassCastException
Patric Plitzner [Thu, 4 Dec 2014 09:27:37 +0000 (09:27 +0000)]
 - fixed ClassCastException

8 years ago - adapted to method signature change in cdmlib
Patric Plitzner [Thu, 4 Dec 2014 09:02:48 +0000 (09:02 +0000)]
 - adapted to method signature change in cdmlib

8 years ago - deleted usage of commented method in cdmlib
Patric Plitzner [Wed, 3 Dec 2014 15:39:31 +0000 (15:39 +0000)]
 - deleted usage of commented method in cdmlib

8 years ago - added command, handler, double click listener to open taxa from associated taxa...
Patric Plitzner [Wed, 3 Dec 2014 15:24:36 +0000 (15:24 +0000)]
 - added command, handler, double click listener to open taxa from associated taxa section in details view
 - caught runtime exception for orphaned taxa

8 years agoadapt transientServices to returntype of isdeletable methods
Katja Luther [Wed, 3 Dec 2014 13:00:18 +0000 (13:00 +0000)]
adapt transientServices to returntype of isdeletable methods

8 years ago - renamed interface IDerivedUnitFacadeEditor to IDerivedUnitFacadePart
Patric Plitzner [Wed, 3 Dec 2014 12:27:57 +0000 (12:27 +0000)]
 - renamed interface IDerivedUnitFacadeEditor to IDerivedUnitFacadePart
 - show field unit data in NewDerivedUnitBaseWizard

8 years ago - added interface IDerivedUnitFacadeEditor to tag editors that are working with...
Patric Plitzner [Wed, 3 Dec 2014 08:47:56 +0000 (08:47 +0000)]
 - added interface IDerivedUnitFacadeEditor to tag editors that are working with DerivedUnitFacades (e.g. BulkEditor)
 - show field unit data for DerivedUnit when selected in BulkEditor

8 years ago - removed unused imports
Patric Plitzner [Tue, 2 Dec 2014 09:32:17 +0000 (09:32 +0000)]
 - removed unused imports

8 years ago - added preference for displaying associated taxa in specimen details view
Patric Plitzner [Tue, 2 Dec 2014 09:24:50 +0000 (09:24 +0000)]
 - added preference for displaying associated taxa in specimen details view

8 years ago - added section for associated taxa (IndividualsAssocation, TypeDesignation) to...
Patric Plitzner [Tue, 2 Dec 2014 09:01:38 +0000 (09:01 +0000)]
 - added section for associated taxa (IndividualsAssocation, TypeDesignation) to DetailsView for specimen

8 years ago - added amplification description to single read label in hierarchy
Patric Plitzner [Tue, 2 Dec 2014 08:58:45 +0000 (08:58 +0000)]
 - added amplification description to single read label in hierarchy
 - added marker to update method of amplification description

8 years ago - refactored/cleaned up commands extension point
Patric Plitzner [Tue, 2 Dec 2014 08:56:31 +0000 (08:56 +0000)]
 - refactored/cleaned up commands extension point

8 years agofix the problem of referencingObjectsView and deletion in bulk editor
Katja Luther [Mon, 1 Dec 2014 11:35:40 +0000 (11:35 +0000)]
fix the problem of referencingObjectsView and deletion in bulk editor

8 years ago - added missing service method to transient service
Patric Plitzner [Mon, 1 Dec 2014 10:30:58 +0000 (10:30 +0000)]
 - added missing service method to transient service

8 years ago - refactored LanguageStringWithLabelElement (isMultiLine flag)
Patric Plitzner [Mon, 1 Dec 2014 09:43:23 +0000 (09:43 +0000)]
 - refactored LanguageStringWithLabelElement (isMultiLine flag)

8 years ago - added notes (annotations) to SingleRead details view
Patric Plitzner [Mon, 1 Dec 2014 09:26:46 +0000 (09:26 +0000)]
 - added notes (annotations) to SingleRead details view

8 years ago - layout enhancement
Patric Plitzner [Mon, 1 Dec 2014 09:26:11 +0000 (09:26 +0000)]
 - layout enhancement

8 years ago - added barcode to MediaSpecimen label
Patric Plitzner [Mon, 1 Dec 2014 09:25:43 +0000 (09:25 +0000)]
 - added barcode to MediaSpecimen label

8 years ago - fixed possible NPE when opening DerivateView for a taxon when no derivates exist
Patric Plitzner [Wed, 26 Nov 2014 15:07:51 +0000 (15:07 +0000)]
 - fixed possible NPE when opening DerivateView for a taxon when no derivates exist

8 years ago - activated filter in factual data view for displaying only IndividualsAssociations
Patric Plitzner [Wed, 26 Nov 2014 14:20:29 +0000 (14:20 +0000)]
 - activated filter in factual data view for displaying only IndividualsAssociations

8 years ago - removed obsolete Primer page for AmplificationWizard
Patric Plitzner [Wed, 26 Nov 2014 13:52:45 +0000 (13:52 +0000)]
 - removed obsolete Primer page for AmplificationWizard
 - added dnaMarker to amplification designation

8 years ago - re-enabled MediaViewPart for DerivateView (#4475)
Patric Plitzner [Wed, 26 Nov 2014 12:50:33 +0000 (12:50 +0000)]
 - re-enabled MediaViewPart for DerivateView (#4475)

8 years ago - added missing service method to transient service
Patric Plitzner [Wed, 26 Nov 2014 12:21:37 +0000 (12:21 +0000)]
 - added missing service method to transient service

8 years ago - moved extension point for taxon navigator context menu
Patric Plitzner [Wed, 26 Nov 2014 12:19:10 +0000 (12:19 +0000)]
 - moved extension point for taxon navigator context menu
 - fixed DerivateSearchView layout
 - added "disabled" extension point for toggling individual assciations in factual data view

8 years ago - set multiline flag for LanguageStringWithLabelElement #2248
Patric Plitzner [Wed, 26 Nov 2014 11:45:12 +0000 (11:45 +0000)]
 - set multiline flag for LanguageStringWithLabelElement #2248

8 years ago - added clear button to DerivateSearchView
Patric Plitzner [Wed, 26 Nov 2014 08:54:43 +0000 (08:54 +0000)]
 - added clear button to DerivateSearchView
 - made use of cdmlib service to get associated specimen for one taxon (#4506)

8 years agoadded checks to makes sure no other exception is thrown within the dialog creation...
Cherian Mathew [Tue, 25 Nov 2014 12:33:21 +0000 (12:33 +0000)]
added checks to makes sure no other exception is thrown within the dialog creation code #4502.

8 years ago - added context menu entry to taxon navigator to open associated derivates in Deriva...
Patric Plitzner [Tue, 25 Nov 2014 09:02:07 +0000 (09:02 +0000)]
 - added context menu entry to taxon navigator to open associated derivates in DerivateEditor
 - added taxon filter to DerivateSearchView (non-functional) (#4506)

8 years ago - added some more molecular parameters to the DetailsView
Patric Plitzner [Mon, 24 Nov 2014 10:47:33 +0000 (10:47 +0000)]
 - added some more molecular parameters to the DetailsView

8 years ago - removed unused code
Patric Plitzner [Mon, 24 Nov 2014 10:16:04 +0000 (10:16 +0000)]
 - removed unused code

8 years ago - converted dnaQuality from DefinedTerm to OrderedTerm (#4434)
Patric Plitzner [Mon, 24 Nov 2014 09:12:50 +0000 (09:12 +0000)]
 - converted dnaQuality from DefinedTerm to OrderedTerm (#4434)

8 years ago - adapted to cdmlib changes (#4434)
Patric Plitzner [Mon, 24 Nov 2014 08:37:19 +0000 (08:37 +0000)]
 - adapted to cdmlib changes (#4434)

8 years ago - added preference for showing Collecting Areas below Country in DetailsView (#4473)
Patric Plitzner [Thu, 20 Nov 2014 13:53:04 +0000 (13:53 +0000)]
 - added preference for showing Collecting Areas below Country in DetailsView (#4473)

8 years ago - made use of TermType DnaQuality
Patric Plitzner [Thu, 20 Nov 2014 10:15:47 +0000 (10:15 +0000)]
 - made use of TermType DnaQuality

8 years ago - added static method to DerivateLabelProvider to get the derivate text
Patric Plitzner [Thu, 20 Nov 2014 09:42:51 +0000 (09:42 +0000)]
 - added static method to DerivateLabelProvider to get the derivate text
 - refactored moving of derivates to use the operation framework.
  - immplemented undo/redo

8 years ago - DerivateView and BulkEditor trigger selection change event for MediaViewPart ...
Patric Plitzner [Thu, 20 Nov 2014 09:41:33 +0000 (09:41 +0000)]
 - DerivateView and BulkEditor trigger selection change event for MediaViewPart (fixes #4475)

8 years ago - DerivedUnits DetailsView only shows FieldUnit data in titleCache (fixes #4474)
Patric Plitzner [Thu, 20 Nov 2014 09:36:31 +0000 (09:36 +0000)]
 - DerivedUnits DetailsView only shows FieldUnit data in titleCache (fixes #4474)
 - Areas section is now shown below country for FieldUnits (fixes 4473)

8 years ago - Rights section is now part of MediaSpecimen DetailsView (fixes #4472)
Patric Plitzner [Thu, 20 Nov 2014 09:34:28 +0000 (09:34 +0000)]
 - Rights section is now part of MediaSpecimen DetailsView (fixes #4472)
 - DerivedUnits DetailsView only shows FieldUnit data in titleCache (fixes #4474)

8 years ago - extended DerivateSearchView to allow multiple selection
Patric Plitzner [Tue, 18 Nov 2014 13:47:29 +0000 (13:47 +0000)]
 - extended DerivateSearchView to allow multiple selection
  - added context menu to open multiple elements in DerivateView
 - extended DerivateView to show multiple derivate hierarchies in one view

8 years agoremotingApplicationContext : now using the cachers from cdmlib
Cherian Mathew [Tue, 18 Nov 2014 09:28:01 +0000 (09:28 +0000)]
remotingApplicationContext : now using the cachers from cdmlib
CdmServiceCacher : added unimplemented method

8 years ago#4463 fixed
Katja Luther [Mon, 17 Nov 2014 12:39:46 +0000 (12:39 +0000)]
#4463 fixed
if a titlecache is updated and the position of the parsing problem is behind the actual text no position is created.

8 years ago - exported eu.etaxonomy.cdm.io.csv.redlist.demo package to fix compile errors
Patric Plitzner [Mon, 17 Nov 2014 09:54:35 +0000 (09:54 +0000)]
 - exported eu.etaxonomy.cdm.io.csv.redlist.demo package to fix compile errors

8 years agoAdded simple CSV Export to Taxonomic Editor
Alexander Oppermann [Fri, 14 Nov 2014 16:29:20 +0000 (16:29 +0000)]
Added simple CSV Export to Taxonomic Editor

8 years ago - updated molecular DetailsViews according to requirements
Patric Plitzner [Wed, 12 Nov 2014 14:35:23 +0000 (14:35 +0000)]
 - updated molecular DetailsViews according to requirements

8 years ago - used ImageFile instead of more generic MediaRepresentationPart when creating the...
Patric Plitzner [Wed, 12 Nov 2014 08:51:52 +0000 (08:51 +0000)]
 - used ImageFile instead of more generic MediaRepresentationPart when creating the Media (fixes #4402)
 - fixed a typo

8 years ago - moved OriginalLabelData section to 2nd position
Patric Plitzner [Tue, 11 Nov 2014 13:11:11 +0000 (13:11 +0000)]
 - moved OriginalLabelData section to 2nd position
   - made text field fill horizontally

8 years ago - refactored DerivateViewEditorInput to use UUIDs instead of CDM entities
Patric Plitzner [Tue, 11 Nov 2014 08:34:23 +0000 (08:34 +0000)]
 - refactored DerivateViewEditorInput to use UUIDs instead of CDM entities
 - added delete operation to DerivateView (currently only deleting leafs of the derivate tree is allowed)

8 years agofixing problems in bulkeditor and minor
Katja Luther [Mon, 10 Nov 2014 08:55:43 +0000 (08:55 +0000)]
fixing problems in bulkeditor and minor

8 years ago - fixed possible NPE
Patric Plitzner [Tue, 4 Nov 2014 14:54:51 +0000 (14:54 +0000)]
 - fixed possible NPE

8 years ago - used more pepresentative DerivationEventTypes when creating derivates via DerivatView
Patric Plitzner [Tue, 4 Nov 2014 13:56:39 +0000 (13:56 +0000)]
 - used more pepresentative DerivationEventTypes when creating derivates via DerivatView

8 years ago(no commit message)
Katja Luther [Thu, 30 Oct 2014 10:44:49 +0000 (10:44 +0000)]

8 years agofixing #2547
Katja Luther [Thu, 30 Oct 2014 10:43:43 +0000 (10:43 +0000)]
fixing #2547

8 years ago - fixed class cast exception
Patric Plitzner [Wed, 29 Oct 2014 14:50:10 +0000 (14:50 +0000)]
 - fixed class cast exception

8 years ago(no commit message)
Katja Luther [Wed, 29 Oct 2014 12:18:01 +0000 (12:18 +0000)]

8 years ago - added exception throwing to URI assembly in Sequence class
Patric Plitzner [Wed, 29 Oct 2014 10:39:34 +0000 (10:39 +0000)]
 - added exception throwing to URI assembly in Sequence class
 - handled exception in editor details view

8 years ago - added elevation to section title
Patric Plitzner [Wed, 29 Oct 2014 10:38:50 +0000 (10:38 +0000)]
 - added elevation to section title

8 years ago - applied coding conventions
Patric Plitzner [Wed, 29 Oct 2014 10:38:11 +0000 (10:38 +0000)]
 - applied coding conventions

8 years ago - fixed possible SessionException
Patric Plitzner [Wed, 29 Oct 2014 08:37:56 +0000 (08:37 +0000)]
 - fixed possible SessionException

8 years ago - adapted derivate hierarchy assembly to cdmlib3.4 changes (TissueSample, DnaSample...
Patric Plitzner [Tue, 28 Oct 2014 18:25:17 +0000 (18:25 +0000)]
 - adapted derivate hierarchy assembly to cdmlib3.4 changes (TissueSample, DnaSample as one class)

8 years agoeu.etaxonomy.taxeditor/pom.xml : reverted addition of nebula widget jars
Cherian Mathew [Tue, 28 Oct 2014 16:52:24 +0000 (16:52 +0000)]
eu.etaxonomy.taxeditor/pom.xml : reverted addition of nebula widget jars
pom.xml : changed nebula repository to archived one
eu.etaxonomy.taxeditor/rcp.target : changed composite table jar widget to the one in the repository

8 years agoremoved version dependency for org.eclipse.nebula.widgets.compositetable
Cherian Mathew [Tue, 28 Oct 2014 14:45:30 +0000 (14:45 +0000)]
removed version dependency for org.eclipse.nebula.widgets.compositetable
and added the composite table jar to the p2 update

8 years agofix #4450
Katja Luther [Tue, 28 Oct 2014 13:10:03 +0000 (13:10 +0000)]
fix #4450

8 years agoadded space between beta prefix and version
Cherian Mathew [Tue, 28 Oct 2014 08:53:06 +0000 (08:53 +0000)]
added space between beta prefix and version

8 years ago - fixed double exception dialog popup when not connected to data source
Patric Plitzner [Mon, 27 Oct 2014 12:48:42 +0000 (12:48 +0000)]
 - fixed double exception dialog popup when not connected to data source
 - fixed NPE when starting ABCD import with dirty editors

8 years ago - fixed possible NPE when entering DnaQuality data
Patric Plitzner [Mon, 27 Oct 2014 10:50:11 +0000 (10:50 +0000)]
 - fixed possible NPE when entering DnaQuality data

8 years ago - implemented missing interface method
Patric Plitzner [Mon, 27 Oct 2014 09:22:29 +0000 (09:22 +0000)]
 - implemented missing interface method

8 years agochanged beta prefix back to beta
Cherian Mathew [Fri, 24 Oct 2014 08:22:25 +0000 (08:22 +0000)]
changed beta prefix back to beta

8 years ago - added kind of tissue to TissueSampleDetailsView
Patric Plitzner [Wed, 22 Oct 2014 13:42:08 +0000 (13:42 +0000)]
 - added kind of tissue to TissueSampleDetailsView

8 years ago - added TODO
Patric Plitzner [Wed, 22 Oct 2014 13:36:31 +0000 (13:36 +0000)]
 - added TODO

8 years agoreintegrated taxeditor-3.4 branch into trunk
Patric Plitzner [Wed, 22 Oct 2014 12:59:25 +0000 (12:59 +0000)]
reintegrated taxeditor-3.4 branch into trunk

8 years agomerge-update from trunk taxeditor-3.4 root/branches/taxeditor/taxeditor-3.4
Patric Plitzner [Wed, 22 Oct 2014 12:42:13 +0000 (12:42 +0000)]
merge-update from trunk

8 years ago - generalized sample designation GUI elements
Patric Plitzner [Wed, 22 Oct 2014 11:57:52 +0000 (11:57 +0000)]
 - generalized sample designation GUI elements
 - added sample designation to TissueSample details view
 - added some more parameters to TissueSample details view

8 years agomerge-update from trunk
Patric Plitzner [Tue, 21 Oct 2014 12:45:04 +0000 (12:45 +0000)]
merge-update from trunk

8 years ago - added empty "Delete Derivate" functionality to DerivateView
Patric Plitzner [Tue, 21 Oct 2014 12:44:52 +0000 (12:44 +0000)]
 - added empty "Delete Derivate" functionality to DerivateView

8 years ago - removed unused package
Patric Plitzner [Tue, 21 Oct 2014 11:44:23 +0000 (11:44 +0000)]
 - removed unused package

8 years agomerge-update from trunk
Patric Plitzner [Tue, 21 Oct 2014 10:42:04 +0000 (10:42 +0000)]
merge-update from trunk

8 years ago - extended DnaQuality details view
Patric Plitzner [Tue, 21 Oct 2014 10:41:34 +0000 (10:41 +0000)]
 - extended DnaQuality details view
 - refactored DateElement creation

8 years ago - added more paramaters to DnaQuality details view
Patric Plitzner [Tue, 21 Oct 2014 07:43:21 +0000 (07:43 +0000)]
 - added more paramaters to DnaQuality details view
 - fixed ordering of sample designations for DnaSamples (first is current)

8 years ago - added some detail elements
Patric Plitzner [Mon, 20 Oct 2014 15:12:41 +0000 (15:12 +0000)]
 - added some detail elements

8 years ago - refresh after updating datasource (fixes #2117)
Patric Plitzner [Mon, 20 Oct 2014 15:12:29 +0000 (15:12 +0000)]
 - refresh after updating datasource (fixes #2117)

8 years ago - adapted to cdmlib changes
Patric Plitzner [Mon, 20 Oct 2014 15:11:46 +0000 (15:11 +0000)]
 - adapted to cdmlib changes

8 years agodeleted project from trunk to work on branch
Cherian Mathew [Mon, 20 Oct 2014 11:50:14 +0000 (11:50 +0000)]
deleted project from trunk to work on branch

8 years agomerge-update from trunk
Patric Plitzner [Mon, 20 Oct 2014 11:19:09 +0000 (11:19 +0000)]
merge-update from trunk

8 years agoadding license text to feature projects since these were removed from feature.xml
Cherian Mathew [Mon, 20 Oct 2014 11:08:32 +0000 (11:08 +0000)]
adding license text to feature projects since these were removed from feature.xml

8 years agoadded polytomous key tests and initial developments on caching
Cherian Mathew [Mon, 20 Oct 2014 11:05:56 +0000 (11:05 +0000)]
added polytomous key tests and initial developments on caching

8 years agoupdated CDMServer and corresponding test files to use dbunit datasets with the possib...
Cherian Mathew [Mon, 20 Oct 2014 10:59:37 +0000 (10:59 +0000)]
updated CDMServer and corresponding test files to use dbunit datasets with the possibility
of targetting a managed as well as external instance of the CDMServer

8 years agoadded required jars and setup svn:ignore property using .svnignore
Cherian Mathew [Mon, 20 Oct 2014 10:57:19 +0000 (10:57 +0000)]
added required jars and setup svn:ignore property using .svnignore

8 years ago - added sampleDesignation section to DnaSample details view (#4237)
Patric Plitzner [Mon, 20 Oct 2014 08:47:23 +0000 (08:47 +0000)]
 - added sampleDesignation section to DnaSample details view (#4237)
 - added sampleDesignation to DerivateLabelProvider

8 years ago - re-enabled specimen type chooser
Patric Plitzner [Mon, 20 Oct 2014 08:45:19 +0000 (08:45 +0000)]
 - re-enabled specimen type chooser

8 years ago - adapted method calls to cdmlib changes
Patric Plitzner [Mon, 20 Oct 2014 08:21:56 +0000 (08:21 +0000)]
 - adapted method calls to cdmlib changes