taxeditor.git
8 years agomerged campanula branch to trunk. Main features are: BioCase Query via Imports, Deriv...
Patric Plitzner [Wed, 22 Jan 2014 09:57:31 +0000 (09:57 +0000)]
merged campanula branch to trunk. Main features are: BioCase Query via Imports, Derivate Search View, Derivate (Hierarchy) View, Derivate perspective, type-specific DetailsViews for specimens

8 years agomerge-update from trunk attic/branches/taxeditor/campanula/19945
Patric Plitzner [Tue, 21 Jan 2014 15:03:58 +0000 (15:03 +0000)]
merge-update from trunk

8 years ago - added AbstractUnboundEntityCollectionSection which allows adding elements to colle...
Patric Plitzner [Tue, 21 Jan 2014 14:52:08 +0000 (14:52 +0000)]
 - added AbstractUnboundEntityCollectionSection which allows adding elements to collection sections without adding them to the model object

8 years agomerge-update from trunk
Patric Plitzner [Tue, 21 Jan 2014 08:34:38 +0000 (08:34 +0000)]
merge-update from trunk

8 years ago - added cdmlib sources
Patric Plitzner [Tue, 21 Jan 2014 08:33:00 +0000 (08:33 +0000)]
 - added cdmlib sources

8 years ago - partly fixed sequence reference collection section
Patric Plitzner [Tue, 21 Jan 2014 08:30:28 +0000 (08:30 +0000)]
 - partly fixed sequence reference collection section

8 years ago - added java package for different occurrence/specimen types
Patric Plitzner [Mon, 20 Jan 2014 14:57:35 +0000 (14:57 +0000)]
 - added java package for different occurrence/specimen types
 - moved "show field unit" option to "Bulk Editor" preference page
 - added preference to show only type-specific details views for specimens

8 years agomerge-update fixes
Patric Plitzner [Mon, 20 Jan 2014 08:58:58 +0000 (08:58 +0000)]
merge-update fixes

8 years agomerge-update from trunk
Patric Plitzner [Mon, 20 Jan 2014 08:51:06 +0000 (08:51 +0000)]
merge-update from trunk

8 years ago - added separate section for primer and cloning
Patric Plitzner [Mon, 20 Jan 2014 08:12:36 +0000 (08:12 +0000)]
 - added separate section for primer and cloning
 - removed "null" message in data source conversion dialog

8 years agoUpdated version in config files to 3.3.0
edit-jenkins [Thu, 16 Jan 2014 09:14:35 +0000 (09:14 +0000)]
Updated version in config files to 3.3.0

8 years ago - updated "update datasource" message popup
Patric Plitzner [Wed, 15 Jan 2014 10:54:06 +0000 (10:54 +0000)]
 - updated "update datasource" message popup

8 years ago - updated "update datasource" message popup
Patric Plitzner [Wed, 15 Jan 2014 08:07:31 +0000 (08:07 +0000)]
 - updated "update datasource" message popup

8 years agofix missing publish flag for synonyms
Andreas Müller [Tue, 14 Jan 2014 22:18:53 +0000 (22:18 +0000)]
fix missing publish flag for synonyms

8 years agomerge-update from trunk
Patric Plitzner [Tue, 14 Jan 2014 16:15:13 +0000 (16:15 +0000)]
merge-update from trunk

8 years agofix for #3557
Patric Plitzner [Tue, 14 Jan 2014 16:01:08 +0000 (16:01 +0000)]
fix for #3557
 - reactivated details view for taxon relationships
 - added doubtful flag

8 years ago - also allow *.xlsx and *.* for Excel import (fixes #3657)
Patric Plitzner [Tue, 14 Jan 2014 14:34:29 +0000 (14:34 +0000)]
 - also allow *.xlsx and *.* for Excel import (fixes #3657)

8 years ago - set recordBasis according to selecting in context menu (fixes #3753)
Patric Plitzner [Tue, 14 Jan 2014 14:06:51 +0000 (14:06 +0000)]
 - set recordBasis according to selecting in context menu (fixes #3753)

8 years agochange ICBN to ICNAFP in manual #3745
Andreas Müller [Tue, 14 Jan 2014 12:31:07 +0000 (12:31 +0000)]
change ICBN to ICNAFP in manual  #3745

8 years agoworkaround for release 3.3.0 related to ticket 3828 forcing SHOULD_CONNECT_AT_STARTUP...
Cherian Mathew [Tue, 14 Jan 2014 11:45:03 +0000 (11:45 +0000)]
workaround for release 3.3.0 related to ticket 3828 forcing SHOULD_CONNECT_AT_STARTUP to always be false.

8 years ago - fixed potential NPEs in Amplification DetailsView
Patric Plitzner [Tue, 14 Jan 2014 07:36:35 +0000 (07:36 +0000)]
 - fixed potential NPEs in Amplification DetailsView

8 years ago - added reference collection section to Sequence DetailsView
Patric Plitzner [Mon, 13 Jan 2014 07:53:47 +0000 (07:53 +0000)]
 - added reference collection section to Sequence DetailsView
 - implemented handleEvent() for some DetailsViews

8 years agomerge-update from trunk
Patric Plitzner [Wed, 8 Jan 2014 16:32:50 +0000 (16:32 +0000)]
merge-update from trunk

8 years ago - added startNumber to PolytomousKey DetailsView (fixes #3563)
Patric Plitzner [Wed, 8 Jan 2014 16:13:13 +0000 (16:13 +0000)]
 - added startNumber to PolytomousKey DetailsView (fixes #3563)

8 years ago - added idInVocabulary to DefinedTerm DetailsView (#3542)
Patric Plitzner [Wed, 8 Jan 2014 15:33:51 +0000 (15:33 +0000)]
 - added idInVocabulary to DefinedTerm DetailsView (#3542)

8 years ago added hardcoded base layer "earth" (#3941)
Patric Plitzner [Wed, 8 Jan 2014 14:08:06 +0000 (14:08 +0000)]
 added hardcoded base layer "earth" (#3941)

8 years ago changed tooltip to "factual data"
Patric Plitzner [Wed, 8 Jan 2014 14:07:31 +0000 (14:07 +0000)]
 changed tooltip to "factual data"

8 years ago - changed default map service access point (fixes #3941)
Patric Plitzner [Wed, 8 Jan 2014 10:02:27 +0000 (10:02 +0000)]
 - changed default map service access point (fixes #3941)

8 years ago - added elements for Sequence/Amplification/SingleRead DetailsView
Patric Plitzner [Tue, 7 Jan 2014 08:00:15 +0000 (08:00 +0000)]
 - added elements for Sequence/Amplification/SingleRead DetailsView

8 years ago - added reference selection to Sequence DetailsView
Patric Plitzner [Mon, 6 Jan 2014 16:49:12 +0000 (16:49 +0000)]
 - added reference selection to Sequence DetailsView

8 years ago - added element for Sequence DetailsView
Patric Plitzner [Mon, 6 Jan 2014 14:36:01 +0000 (14:36 +0000)]
 - added element for Sequence DetailsView

8 years ago - added support for creating and viewing SingleReads in DerivateView
Patric Plitzner [Mon, 6 Jan 2014 12:36:15 +0000 (12:36 +0000)]
 - added support for creating and viewing SingleReads in DerivateView
 - added DetailsViews for SingleReads

8 years agomerge-update from trunk
Patric Plitzner [Mon, 6 Jan 2014 09:56:30 +0000 (09:56 +0000)]
merge-update from trunk

8 years ago - added Amplification and Sequence to DerivateView
Patric Plitzner [Mon, 6 Jan 2014 09:50:48 +0000 (09:50 +0000)]
 - added Amplification and Sequence to DerivateView
 - added context menu entry for the creation of both
 - added DetailsViews for both

8 years ago - added Amplifications and Seuqences (consensus) to derivate hierarchy (DerivateView)
Patric Plitzner [Wed, 18 Dec 2013 15:37:34 +0000 (15:37 +0000)]
 - added Amplifications and Seuqences (consensus) to derivate hierarchy (DerivateView)

8 years ago - adapted to trunk-merge changes
Patric Plitzner [Wed, 18 Dec 2013 08:53:17 +0000 (08:53 +0000)]
 - adapted to trunk-merge changes

8 years agomerge-update from trunk
Patric Plitzner [Wed, 18 Dec 2013 08:49:10 +0000 (08:49 +0000)]
merge-update from trunk

8 years agoadapting to method signature change
Andreas Kohlbecker [Wed, 18 Dec 2013 08:44:14 +0000 (08:44 +0000)]
adapting to method signature change

8 years ago - added amplification section to DNA DetailsView
Patric Plitzner [Wed, 18 Dec 2013 07:51:37 +0000 (07:51 +0000)]
 - added amplification section to DNA DetailsView

8 years ago - added DetailsView for PreservedSpecimen which directly work with DerivedUnit inste...
Patric Plitzner [Tue, 17 Dec 2013 15:06:25 +0000 (15:06 +0000)]
 - added DetailsView for PreservedSpecimen which directly work with DerivedUnit instead of DerivedUnitFacade (new classes work in parallel to the ones using DerivedUnitFacades and start with "PreservedSpecimen")

8 years ago - added specific DetailsViews that are not based on DerivedUnitFacade for DNA and...
Patric Plitzner [Tue, 17 Dec 2013 08:03:58 +0000 (08:03 +0000)]
 - added specific DetailsViews that are not based on DerivedUnitFacade for DNA and specimens

8 years ago - added preliminary method for getting specimen by type/record basis (needs enhancem...
Patric Plitzner [Tue, 17 Dec 2013 08:03:13 +0000 (08:03 +0000)]
 - added preliminary method for getting specimen by type/record basis (needs enhancement with direct SQL queries)

8 years ago - added a flag to force also searching for FieldUnits when searching occurrences
Patric Plitzner [Mon, 16 Dec 2013 14:07:52 +0000 (14:07 +0000)]
 - added a flag to force also searching for FieldUnits when searching occurrences

8 years ago - updated DerivateSearchView and DerivateView icon
Patric Plitzner [Mon, 16 Dec 2013 09:39:25 +0000 (09:39 +0000)]
 - updated DerivateSearchView and DerivateView icon

8 years ago - updated DerivateSearchView icon
Patric Plitzner [Mon, 16 Dec 2013 08:57:16 +0000 (08:57 +0000)]
 - updated DerivateSearchView icon

8 years ago - added empty DetailViews for all derivate types
Patric Plitzner [Mon, 16 Dec 2013 07:54:13 +0000 (07:54 +0000)]
 - added empty DetailViews for all derivate types

8 years ago - added derivate types to DerivateSearchView combo
Patric Plitzner [Mon, 16 Dec 2013 07:53:40 +0000 (07:53 +0000)]
 - added derivate types to DerivateSearchView combo

8 years ago - fixed bug when creating another DescriptionElement
Patric Plitzner [Mon, 16 Dec 2013 07:52:56 +0000 (07:52 +0000)]
 - fixed bug when creating another DescriptionElement

8 years ago - enhanced DNA icon
Patric Plitzner [Wed, 11 Dec 2013 14:38:35 +0000 (14:38 +0000)]
 - enhanced DNA icon
 - enhanced context menu for derivate creation

8 years ago - fixed session problems by using just the UUID of the derivate from the DerivateSea...
Patric Plitzner [Wed, 11 Dec 2013 10:46:32 +0000 (10:46 +0000)]
 - fixed session problems by using just the UUID of the derivate from the DerivateSearchView, passing it to the DerivateViewEditorInput and start the conversation in the EditorInput. All other objects will then be created in the same conversation/session

8 years ago - removed incorrect cdmlib dependencies
Patric Plitzner [Wed, 11 Dec 2013 10:41:13 +0000 (10:41 +0000)]
 - removed incorrect cdmlib dependencies

8 years ago - added icons for derivate views
Patric Plitzner [Tue, 10 Dec 2013 15:06:02 +0000 (15:06 +0000)]
 - added icons for derivate views
 - enhanced DerivateViewEditorInput handling

8 years ago - added "Derivates" perspective
Patric Plitzner [Tue, 10 Dec 2013 09:04:11 +0000 (09:04 +0000)]
 - added "Derivates" perspective
 - enhanced selections and icons for derivate views

8 years ago - added icons
Patric Plitzner [Mon, 9 Dec 2013 14:47:38 +0000 (14:47 +0000)]
 - added icons
 - added error handling

8 years ago - fixed derivate icons
Patric Plitzner [Mon, 9 Dec 2013 13:26:22 +0000 (13:26 +0000)]
 - fixed derivate icons
 - fixed possible NPE

8 years agomerge-update from trunk
Patric Plitzner [Mon, 9 Dec 2013 13:02:57 +0000 (13:02 +0000)]
merge-update from trunk

8 years ago - added derivate icons
Patric Plitzner [Mon, 9 Dec 2013 13:02:32 +0000 (13:02 +0000)]
 - added derivate icons
 - adapted transient interface

8 years ago - Changed DerivateViewEditorInput to hold the FieldUnit itself
Patric Plitzner [Mon, 9 Dec 2013 09:36:25 +0000 (09:36 +0000)]
 - Changed DerivateViewEditorInput to hold the FieldUnit itself
 - added icons to ImageResources

8 years agoadapting to new method signature of getDistributionServiceRequestParameterString()
Andreas Kohlbecker [Fri, 6 Dec 2013 11:58:51 +0000 (11:58 +0000)]
adapting to new method signature of getDistributionServiceRequestParameterString()

8 years ago#3877
Katja Luther [Thu, 5 Dec 2013 13:33:37 +0000 (13:33 +0000)]
#3877

8 years ago - added icons to derivates in DerivateView
Patric Plitzner [Wed, 4 Dec 2013 15:12:11 +0000 (15:12 +0000)]
 - added icons to derivates in DerivateView

8 years ago - extracted AbstractDescriptionPostOperation to be super class of Create Specimen...
Patric Plitzner [Wed, 4 Dec 2013 14:44:15 +0000 (14:44 +0000)]
  - extracted AbstractDescriptionPostOperation to be super class of Create Specimen/Taxon DescriptionOperation
    - adapted CreateDescriptionHandler to changes
  - fixed refresh of factual data view after creating specimen description

8 years ago - adapted sub classes of AbstractPostOperation
Patric Plitzner [Wed, 4 Dec 2013 08:34:15 +0000 (08:34 +0000)]
 - adapted sub classes of AbstractPostOperation

8 years ago - extracted super class from AbstractPostOperation (same name)
Patric Plitzner [Tue, 3 Dec 2013 14:44:59 +0000 (14:44 +0000)]
 - extracted super class from AbstractPostOperation (same name)
 - created sub class AbstractPost Taxon/Describable Operation

8 years agomerge-update from trunk
Patric Plitzner [Tue, 3 Dec 2013 14:11:29 +0000 (14:11 +0000)]
merge-update from trunk

8 years ago - enabled DescriptiveView (Factual Data) to show descriptions of SpecimenOrObservati...
Patric Plitzner [Tue, 3 Dec 2013 14:04:28 +0000 (14:04 +0000)]
 - enabled DescriptiveView (Factual Data) to show descriptions of SpecimenOrObservationBase

8 years ago - fix for #3849 (mark view dirty for changes on FieldUnits)
Patric Plitzner [Tue, 3 Dec 2013 10:35:55 +0000 (10:35 +0000)]
 - fix for #3849 (mark view dirty for changes on FieldUnits)

8 years agomerge-update from trunk
Patric Plitzner [Tue, 3 Dec 2013 10:20:50 +0000 (10:20 +0000)]
merge-update from trunk

8 years agomerge-update from trunk\nadded throws to delete methods of transient services
Patric Plitzner [Mon, 2 Dec 2013 12:09:31 +0000 (12:09 +0000)]
merge-update from trunk\nadded throws to delete methods of transient services

8 years agomerge-update from trunk
Patric Plitzner [Mon, 2 Dec 2013 12:00:52 +0000 (12:00 +0000)]
merge-update from trunk

8 years agodelete whole classification with children
Katja Luther [Mon, 2 Dec 2013 11:55:22 +0000 (11:55 +0000)]
delete whole classification with children

8 years agominor
Katja Luther [Thu, 28 Nov 2013 11:09:17 +0000 (11:09 +0000)]
minor

8 years agoChanged label for Descriptive View and Menus => Factual Data #3863
Andreas Müller [Wed, 27 Nov 2013 21:17:02 +0000 (21:17 +0000)]
Changed label for Descriptive View and Menus => Factual Data  #3863

8 years agoChanged label for Descriptive View => Factual Data #3863
Andreas Müller [Wed, 27 Nov 2013 20:47:21 +0000 (20:47 +0000)]
Changed label for Descriptive View => Factual Data  #3863

8 years agoupdate some logging
Andreas Müller [Wed, 27 Nov 2013 19:20:02 +0000 (19:20 +0000)]
update some logging

8 years ago - Fixed the creation of a single FieldUnit via context-menu in the bulk editor which...
Patric Plitzner [Wed, 27 Nov 2013 16:36:58 +0000 (16:36 +0000)]
 - Fixed the creation of a single FieldUnit via context-menu in the bulk editor which was creating two instead
 - added wizard for FieldUnit creation

8 years agomerge-update from trunk
Patric Plitzner [Wed, 27 Nov 2013 12:36:26 +0000 (12:36 +0000)]
merge-update from trunk

8 years ago - unified DerivateLabelProvider
Patric Plitzner [Wed, 27 Nov 2013 12:08:55 +0000 (12:08 +0000)]
 - unified DerivateLabelProvider

8 years ago - added functionality to context menu for derivate creation
Patric Plitzner [Wed, 27 Nov 2013 08:02:02 +0000 (08:02 +0000)]
 - added functionality to context menu for derivate creation
 - fixed a bug where two FieldUnits were created instead of only on
 - added javadoc

8 years ago - added "isDirty" functionality to DerivateView to allow saving of edited derivates
Patric Plitzner [Tue, 26 Nov 2013 13:54:42 +0000 (13:54 +0000)]
 - added "isDirty" functionality to DerivateView to allow saving of edited derivates

8 years ago - added getter for combo element
Patric Plitzner [Tue, 26 Nov 2013 11:02:07 +0000 (11:02 +0000)]
 - added getter for combo element
 - added setEnable() method for DerivateSearchCompositeController

8 years ago - fixed selection of DerivateSearch result table
Patric Plitzner [Tue, 26 Nov 2013 10:53:20 +0000 (10:53 +0000)]
 - fixed selection of DerivateSearch result table
 - double-click now opens DerivateView

8 years ago#3897
Katja Luther [Tue, 26 Nov 2013 09:03:22 +0000 (09:03 +0000)]
#3897

8 years ago - linked DerivateSearch with DerivateView via double-click (selection does not yet...
Patric Plitzner [Tue, 26 Nov 2013 08:29:03 +0000 (08:29 +0000)]
 - linked DerivateSearch with DerivateView via double-click (selection does not yet work)

8 years ago - removed list of DerivedUnits from EditorInput to make it more light-weight
Patric Plitzner [Tue, 26 Nov 2013 08:27:35 +0000 (08:27 +0000)]
 - removed list of DerivedUnits from EditorInput to make it more light-weight

8 years agomerge-update from trunk
Patric Plitzner [Tue, 26 Nov 2013 07:59:07 +0000 (07:59 +0000)]
merge-update from trunk

8 years ago - added DerivateSearchView
Patric Plitzner [Mon, 25 Nov 2013 14:43:10 +0000 (14:43 +0000)]
 - added DerivateSearchView

8 years ago - removed usage of compatibility interface IEntitySelectionElement
Patric Plitzner [Mon, 25 Nov 2013 07:46:33 +0000 (07:46 +0000)]
 - removed usage of compatibility interface IEntitySelectionElement

8 years ago - quick-fix for DerivateView: always create a FieldUnit when creating a DerivedUnitF...
Patric Plitzner [Mon, 25 Nov 2013 07:44:26 +0000 (07:44 +0000)]
 - quick-fix for DerivateView: always create a FieldUnit when creating a DerivedUnitFacade because a FieldUnit is needed as the root of the hierarchy

8 years agoadd real deletion of polytomouskeynodes
Katja Luther [Wed, 20 Nov 2013 09:42:15 +0000 (09:42 +0000)]
add real deletion of polytomouskeynodes

8 years ago - removed "hexagesimal" (fixes #3879)
Patric Plitzner [Wed, 20 Nov 2013 08:13:49 +0000 (08:13 +0000)]
 - removed "hexagesimal" (fixes #3879)

8 years ago - derivates now show the correct type (record basis) in the bulk editor
Patric Plitzner [Wed, 20 Nov 2013 08:13:03 +0000 (08:13 +0000)]
 - derivates now show the correct type (record basis) in the bulk editor

8 years agomerge-update from trunk
Patric Plitzner [Tue, 19 Nov 2013 14:54:06 +0000 (14:54 +0000)]
merge-update from trunk

8 years ago - fixed NPE
Patric Plitzner [Tue, 19 Nov 2013 14:52:52 +0000 (14:52 +0000)]
 - fixed NPE

8 years ago - added missing wizard pages from trunk
Patric Plitzner [Tue, 19 Nov 2013 07:42:46 +0000 (07:42 +0000)]
 - added missing wizard pages from trunk

8 years agomerge-update of trunk and disabling GUI-Control separation
Patric Plitzner [Mon, 18 Nov 2013 14:17:08 +0000 (14:17 +0000)]
merge-update of trunk and disabling GUI-Control separation

8 years ago - added supportsCommonTaxonName checkbox to FeatureDetailElement (#3207)
Patric Plitzner [Mon, 18 Nov 2013 09:16:03 +0000 (09:16 +0000)]
 - added supportsCommonTaxonName checkbox to FeatureDetailElement (#3207)

8 years agomaybe deproxy solves #3889
Andreas Müller [Fri, 15 Nov 2013 17:04:23 +0000 (17:04 +0000)]
maybe deproxy solves  #3889

8 years agofix ClassCast for Teams
Andreas Müller [Thu, 14 Nov 2013 12:52:28 +0000 (12:52 +0000)]
fix ClassCast for Teams

8 years agoChange label for Feature in PolyKeyNode details
Andreas Müller [Thu, 14 Nov 2013 12:37:17 +0000 (12:37 +0000)]
Change label for Feature in PolyKeyNode details