taxeditor.git
6 years agocleanup
Andreas Müller [Mon, 9 Oct 2017 04:17:25 +0000 (06:17 +0200)]
cleanup

6 years agoref #6913 Remove e3 plugin extensions
Patrick Plitzner [Fri, 6 Oct 2017 14:48:15 +0000 (16:48 +0200)]
ref #6913 Remove e3 plugin extensions

6 years agoFix possible NPE endless loop
Patrick Plitzner [Fri, 6 Oct 2017 14:36:35 +0000 (16:36 +0200)]
Fix possible NPE endless loop

6 years agoref #7008 Migrate export wizards
Patrick Plitzner [Fri, 6 Oct 2017 14:28:49 +0000 (16:28 +0200)]
ref #7008 Migrate export wizards

 - add menu items to navigator context menu

6 years agoref #7005 Refactor DI annotations
Patrick Plitzner [Fri, 6 Oct 2017 14:10:02 +0000 (16:10 +0200)]
ref #7005 Refactor DI annotations

6 years agoref #7008 Migrate CSV export
Patrick Plitzner [Fri, 6 Oct 2017 13:21:00 +0000 (15:21 +0200)]
ref #7008 Migrate CSV export

6 years agosmaller changes for simple name details configuration
Katja Luther [Fri, 6 Oct 2017 12:33:55 +0000 (14:33 +0200)]
smaller changes for simple name details configuration

6 years agoAvoid redundant rendering for views FIX
Patrick Plitzner [Fri, 6 Oct 2017 11:47:58 +0000 (13:47 +0200)]
Avoid redundant rendering for views FIX

6 years agoAvoid redundant rendering for views
Patrick Plitzner [Fri, 6 Oct 2017 11:38:10 +0000 (13:38 +0200)]
Avoid redundant rendering for views

6 years agoref #7007 Migrate bulk editor preference pages
Patrick Plitzner [Fri, 6 Oct 2017 11:07:52 +0000 (13:07 +0200)]
ref #7007 Migrate bulk editor preference pages

6 years agorefactor namedetails preference to allow override
Katja Luther [Fri, 6 Oct 2017 10:24:17 +0000 (12:24 +0200)]
refactor namedetails preference to allow override

6 years agoref #7007 Migrate TermManager memento to preference store
Patrick Plitzner [Fri, 6 Oct 2017 10:08:12 +0000 (12:08 +0200)]
ref #7007 Migrate TermManager memento to preference store

6 years agoref #7006 Fix typo
Patrick Plitzner [Fri, 6 Oct 2017 09:40:12 +0000 (11:40 +0200)]
ref #7006 Fix typo

6 years agoref #7006 Migrate store preferences
Patrick Plitzner [Fri, 6 Oct 2017 08:40:48 +0000 (10:40 +0200)]
ref #7006 Migrate store preferences

6 years agoref #7005 Refactor package structure
Patrick Plitzner [Thu, 5 Oct 2017 12:57:31 +0000 (14:57 +0200)]
ref #7005 Refactor package structure

6 years agorefactor db preferences for specimen and observations
Katja Luther [Fri, 6 Oct 2017 08:09:55 +0000 (10:09 +0200)]
refactor db preferences for specimen and observations

6 years agoref #7005 Remove e3 import command
Patrick Plitzner [Thu, 5 Oct 2017 12:47:44 +0000 (14:47 +0200)]
ref #7005 Remove e3 import command

6 years agoref #7005 Add import menu items to navigator
Patrick Plitzner [Thu, 5 Oct 2017 12:46:19 +0000 (14:46 +0200)]
ref #7005 Add import menu items to navigator

6 years agoref #7005 Remove commented code
Patrick Plitzner [Thu, 5 Oct 2017 11:56:32 +0000 (13:56 +0200)]
ref #7005 Remove commented code

6 years agoref #7005 Migrate Tcs import
Patrick Plitzner [Thu, 5 Oct 2017 11:56:21 +0000 (13:56 +0200)]
ref #7005 Migrate Tcs import

6 years agoref #7005 Migrate Excel specimen import
Patrick Plitzner [Thu, 5 Oct 2017 11:38:29 +0000 (13:38 +0200)]
ref #7005 Migrate Excel specimen import

 - refactor super class constructor

6 years agoref #7005 Migrate SDD import
Patrick Plitzner [Thu, 5 Oct 2017 09:24:05 +0000 (11:24 +0200)]
ref #7005 Migrate SDD import

6 years agoref #7005 Migrate RIS import
Patrick Plitzner [Thu, 5 Oct 2017 09:16:23 +0000 (11:16 +0200)]
ref #7005 Migrate RIS import

6 years agoref #7005 Migrate excel normal explicit taxon import
Patrick Plitzner [Thu, 5 Oct 2017 09:06:41 +0000 (11:06 +0200)]
ref #7005 Migrate excel normal explicit taxon import

6 years agoref #7005 Add selection to constructor
Patrick Plitzner [Thu, 5 Oct 2017 08:00:16 +0000 (10:00 +0200)]
ref #7005 Add selection to constructor

6 years agoref #7005 i18n + remove e3 Excel distribution wizard
Patrick Plitzner [Thu, 5 Oct 2017 07:42:59 +0000 (09:42 +0200)]
ref #7005 i18n + remove e3 Excel distribution wizard

6 years agoref #7005 Migrate Excel distribution import
Patrick Plitzner [Thu, 5 Oct 2017 07:40:28 +0000 (09:40 +0200)]
ref #7005 Migrate Excel distribution import

6 years agoref #7005 Migrate ABCD import
Patrick Plitzner [Thu, 5 Oct 2017 07:19:54 +0000 (09:19 +0200)]
ref #7005 Migrate ABCD import

6 years agofix #6921 Migrate ABCD and GBIF import views
Patrick Plitzner [Wed, 4 Oct 2017 16:04:00 +0000 (18:04 +0200)]
fix #6921 Migrate ABCD and GBIF import views

6 years agoref #6910 Fix "Open in referencing objects view" menu visibility
Patrick Plitzner [Wed, 4 Oct 2017 13:40:51 +0000 (15:40 +0200)]
ref #6910 Fix "Open in referencing objects view" menu visibility

 - clean up plugin.xml files

6 years agoref #6902 Fix visibility of menu items
Patrick Plitzner [Wed, 4 Oct 2017 10:45:10 +0000 (12:45 +0200)]
ref #6902 Fix visibility of menu items

6 years agofix #7000 Enable details view editing for bulke editor
Patrick Plitzner [Wed, 4 Oct 2017 10:04:21 +0000 (12:04 +0200)]
fix #7000 Enable details view  editing for bulke editor

6 years agoadd missing Preference Key
Katja Luther [Wed, 4 Oct 2017 09:48:45 +0000 (11:48 +0200)]
add missing Preference Key

6 years agoref #6949 Fix potential NPE
Patrick Plitzner [Wed, 4 Oct 2017 09:44:26 +0000 (11:44 +0200)]
ref #6949 Fix potential NPE

6 years agoadd allow local override to database preferences
Katja Luther [Wed, 4 Oct 2017 08:56:30 +0000 (10:56 +0200)]
add allow local override to database preferences

6 years agoref #6902 migrate alignment editor and pherogram view
Patrick Plitzner [Fri, 29 Sep 2017 13:20:17 +0000 (15:20 +0200)]
ref #6902 migrate alignment editor and pherogram view

6 years agoref #6159: fix disabling of distribution details
Katja Luther [Fri, 29 Sep 2017 11:02:58 +0000 (13:02 +0200)]
ref #6159: fix disabling of distribution details

6 years agoref #6159: disable descriptionElementDetails for distribution editor
Katja Luther [Fri, 29 Sep 2017 10:28:22 +0000 (12:28 +0200)]
ref #6159: disable descriptionElementDetails for distribution editor

6 years agoBug fix in reverse complementing uncut read sequences.
b.stoever [Mon, 19 Jun 2017 12:00:11 +0000 (14:00 +0200)]
Bug fix in reverse complementing uncut read sequences.

6 years agoTranslation of menu text corrected.
b.stoever [Mon, 19 Jun 2017 11:12:28 +0000 (13:12 +0200)]
Translation of menu text corrected.

6 years agoref #6159: minor
Katja Luther [Fri, 29 Sep 2017 08:42:39 +0000 (10:42 +0200)]
ref #6159: minor

6 years agoref #6908 Fix dirty flag handling in key list editor
Patrick Plitzner [Fri, 29 Sep 2017 08:13:53 +0000 (10:13 +0200)]
ref #6908 Fix dirty flag handling in key list editor

6 years agoref #6159: details of selected distr are shown for distr. editor
Katja Luther [Fri, 29 Sep 2017 07:38:23 +0000 (09:38 +0200)]
ref #6159: details of selected distr are shown for distr. editor

6 years agoFix potential NPE and widget disposed exception
Patrick Plitzner [Fri, 29 Sep 2017 07:20:58 +0000 (09:20 +0200)]
Fix potential NPE and widget disposed exception

6 years agoref #6925 Add non-restore flag to some parts
Patrick Plitzner [Fri, 29 Sep 2017 07:08:52 +0000 (09:08 +0200)]
ref #6925 Add non-restore flag to some parts

6 years agoref #6908 Migrate remaining polytomous context menus and handlers
Patrick Plitzner [Fri, 29 Sep 2017 06:51:13 +0000 (08:51 +0200)]
ref #6908 Migrate remaining polytomous context menus and handlers

6 years agoref #6908 Migrate polytomous key list and graph editor
Patrick Plitzner [Thu, 28 Sep 2017 14:50:05 +0000 (16:50 +0200)]
ref #6908 Migrate polytomous key list and graph editor

6 years agoref #6908 Migrate polytomous key list editor handlers
Patrick Plitzner [Thu, 28 Sep 2017 13:25:00 +0000 (15:25 +0200)]
ref #6908 Migrate polytomous key list editor handlers

6 years agoref #6908 Migrate polytomous key list editor
Patrick Plitzner [Thu, 28 Sep 2017 11:50:53 +0000 (13:50 +0200)]
ref #6908 Migrate polytomous key list editor

 - migrate some other parts and handlers

6 years agofix #6990 Migrate search result view
Patrick Plitzner [Wed, 27 Sep 2017 17:08:20 +0000 (19:08 +0200)]
fix #6990 Migrate search result view

6 years agoref #6913 Remove e3 context menus and views
Patrick Plitzner [Wed, 27 Sep 2017 16:33:57 +0000 (18:33 +0200)]
ref #6913 Remove e3 context menus and views

6 years agoref #6931 Migrate dnd for uses view
Patrick Plitzner [Wed, 27 Sep 2017 16:18:56 +0000 (18:18 +0200)]
ref #6931 Migrate dnd for uses view

6 years agoref #6931 Fix class assignment in model fragment
Patrick Plitzner [Wed, 27 Sep 2017 16:14:15 +0000 (18:14 +0200)]
ref #6931 Fix class assignment in model fragment

6 years agofix NPE in taxonnode comparator
Andreas Müller [Wed, 27 Sep 2017 14:27:48 +0000 (16:27 +0200)]
fix NPE in taxonnode comparator

6 years agofix NPE in taxonnode comparator
Andreas Müller [Wed, 27 Sep 2017 13:58:33 +0000 (15:58 +0200)]
fix NPE in taxonnode comparator

6 years agoref #6925 Fix part initialisation for open handlers
Patrick Plitzner [Wed, 27 Sep 2017 12:51:45 +0000 (14:51 +0200)]
ref #6925 Fix part initialisation for open handlers

6 years agoChecklist editor changes
Katja Luther [Wed, 27 Sep 2017 12:59:55 +0000 (14:59 +0200)]
Checklist editor changes

6 years agofix NPE in Distribution Editor
Katja Luther [Wed, 27 Sep 2017 12:06:43 +0000 (14:06 +0200)]
fix NPE in Distribution Editor

6 years agofurther migration issues for distribution editor
Katja Luther [Wed, 27 Sep 2017 10:52:21 +0000 (12:52 +0200)]
further migration issues for distribution editor

6 years agoref #6989 Refactor property tester for experimental feature
Patrick Plitzner [Wed, 27 Sep 2017 11:35:46 +0000 (13:35 +0200)]
ref #6989 Refactor property tester for experimental feature

6 years agofix #6989 Migrate concept graph
Patrick Plitzner [Wed, 27 Sep 2017 11:34:56 +0000 (13:34 +0200)]
fix #6989 Migrate concept graph

6 years agoref #6909 Remove e3 plugin extensions
Patrick Plitzner [Wed, 27 Sep 2017 09:39:19 +0000 (11:39 +0200)]
ref #6909 Remove e3 plugin extensions

6 years agominor
Katja Luther [Wed, 27 Sep 2017 08:02:23 +0000 (10:02 +0200)]
minor

6 years agomigrate Distribution Editor to e4
Katja Luther [Wed, 27 Sep 2017 07:39:45 +0000 (09:39 +0200)]
migrate Distribution Editor to e4

6 years agoref #6622 Remove e3 menu items and update e4 menu items
Patrick Plitzner [Wed, 27 Sep 2017 07:01:01 +0000 (09:01 +0200)]
ref #6622 Remove e3 menu items and update e4 menu items

 - for bulk editor and specimen editor

6 years agoref #6595 Remove e3 popup menu
Patrick Plitzner [Wed, 27 Sep 2017 06:47:38 +0000 (08:47 +0200)]
ref #6595 Remove e3 popup menu

6 years agoref #6932 Retrieve missing taxon service for saving in bulk editor
Patrick Plitzner [Tue, 26 Sep 2017 14:49:57 +0000 (16:49 +0200)]
ref #6932 Retrieve missing taxon service for saving in bulk editor

6 years agoref #6932 Add missing bulk editor menu items
Patrick Plitzner [Tue, 26 Sep 2017 14:45:45 +0000 (16:45 +0200)]
ref #6932 Add missing bulk editor menu items

6 years agoref #6925 Remove label update depending on selection input
Patrick Plitzner [Tue, 26 Sep 2017 14:10:23 +0000 (16:10 +0200)]
ref #6925 Remove label update depending on selection input

6 years agoref #6598 Migrate "Open in.." handlers
Patrick Plitzner [Tue, 26 Sep 2017 14:08:48 +0000 (16:08 +0200)]
ref #6598 Migrate "Open in.." handlers

6 years agoref #6932 Remove unused code
Patrick Plitzner [Tue, 26 Sep 2017 13:30:20 +0000 (15:30 +0200)]
ref #6932 Remove unused code

6 years agoref #6932 Migrate marker type handler
Patrick Plitzner [Tue, 26 Sep 2017 13:28:41 +0000 (15:28 +0200)]
ref #6932 Migrate marker type handler

6 years agoref #6932 Asjust menu item visibility
Patrick Plitzner [Tue, 26 Sep 2017 12:53:47 +0000 (14:53 +0200)]
ref #6932 Asjust menu item visibility

6 years agoref #6932 Add "Open in..." menu
Patrick Plitzner [Tue, 26 Sep 2017 12:53:29 +0000 (14:53 +0200)]
ref #6932 Add "Open in..." menu

6 years agoref #6597 Fix potential NPE
Patrick Plitzner [Tue, 26 Sep 2017 12:37:37 +0000 (14:37 +0200)]
ref #6597 Fix potential NPE

6 years agoref #6932 Migrate merge handlers
Patrick Plitzner [Tue, 26 Sep 2017 12:32:58 +0000 (14:32 +0200)]
ref #6932 Migrate merge handlers

6 years agoref #6925 Fix part labels for empty views
Patrick Plitzner [Tue, 26 Sep 2017 12:32:29 +0000 (14:32 +0200)]
ref #6925 Fix part labels for empty views

6 years agoref #6905 Fix potential NPE
Patrick Plitzner [Tue, 26 Sep 2017 12:32:07 +0000 (14:32 +0200)]
ref #6905 Fix potential NPE

6 years agoMerge branch 'develop' into bulkEditorE4
Patrick Plitzner [Tue, 26 Sep 2017 11:53:01 +0000 (13:53 +0200)]
Merge branch 'develop' into bulkEditorE4

6 years agoref #6694 Fix potential NPE
Patrick Plitzner [Tue, 26 Sep 2017 11:52:45 +0000 (13:52 +0200)]
ref #6694 Fix potential NPE

6 years agoMerge branch 'develop' into bulkEditorE4
Patrick Plitzner [Mon, 25 Sep 2017 16:34:15 +0000 (18:34 +0200)]
Merge branch 'develop' into bulkEditorE4

6 years agoMerge branch 'release/4.10.0' into develop
jenkins [Mon, 25 Sep 2017 13:22:06 +0000 (15:22 +0200)]
Merge branch 'release/4.10.0' into develop

6 years agoUpdated version in pom / project files to taxeditor version : 4.11.0-SNAPSHOT and...
jenkins [Mon, 25 Sep 2017 12:59:42 +0000 (14:59 +0200)]
Updated version in pom / project files to taxeditor version : 4.11.0-SNAPSHOT and cdmlib version : 4.11.0-SNAPSHOT

6 years agoUpdated version in pom / project files to taxeditor version : 4.10.0 and cdmlib versi...
jenkins [Mon, 25 Sep 2017 12:59:35 +0000 (14:59 +0200)]
Updated version in pom / project files to taxeditor version : 4.10.0 and cdmlib version : 4.10.0

6 years agoref #6933: set anamorph to false if change NC
Katja Luther [Mon, 25 Sep 2017 12:43:26 +0000 (14:43 +0200)]
ref #6933: set anamorph to false if change NC

6 years agoref #6933 minor adaptations to labels for CDM light export
Andreas Müller [Mon, 25 Sep 2017 12:34:10 +0000 (14:34 +0200)]
ref #6933 minor adaptations to labels for CDM light export

6 years agoref #6933 change Export selected classification to Export complete classification
Andreas Müller [Mon, 25 Sep 2017 12:29:37 +0000 (14:29 +0200)]
ref #6933 change Export selected classification to Export complete classification

6 years agoref #6812 adapt download site on https://cybertaxonomy.eu/taxeditor/index.html to...
Andreas Müller [Mon, 25 Sep 2017 12:22:01 +0000 (14:22 +0200)]
ref #6812 adapt download site on https://cybertaxonomy.eu/taxeditor/index.html to link to stable

6 years agoref #6933: classification of selected node preselected in classification combo
Katja Luther [Mon, 25 Sep 2017 12:06:47 +0000 (14:06 +0200)]
ref #6933: classification of selected node preselected in classification combo

6 years agoref #6933: fix NPE
Katja Luther [Mon, 25 Sep 2017 11:58:24 +0000 (13:58 +0200)]
ref #6933: fix NPE

6 years agofix #6693: anamorphic must not be true for all other than fungi
Katja Luther [Mon, 25 Sep 2017 11:42:21 +0000 (13:42 +0200)]
fix #6693: anamorphic must not be true for all other than fungi

6 years agoref #6933: if taxonnode filter is selected classification combo not visible
Katja Luther [Mon, 25 Sep 2017 11:02:20 +0000 (13:02 +0200)]
ref #6933: if taxonnode filter is selected classification combo not visible

6 years agoref ##6894: revert use of classification instead of rootnode for CdmPermittionVoter
Katja Luther [Mon, 25 Sep 2017 08:20:39 +0000 (10:20 +0200)]
ref ##6894: revert use of classification instead of rootnode for CdmPermittionVoter

6 years agoref #6693: add subGenusAuthor to null check when changing NC
Katja Luther [Mon, 25 Sep 2017 07:13:55 +0000 (09:13 +0200)]
ref #6693: add subGenusAuthor to null check when changing NC

6 years agofix details view for taxa also misapplied name
Katja Luther [Sun, 24 Sep 2017 20:49:22 +0000 (22:49 +0200)]
fix details view for taxa also misapplied name

6 years agoref #6347 remove enable from sorting alternatives and use lower case where appropriate
Andreas Müller [Sun, 24 Sep 2017 14:48:55 +0000 (16:48 +0200)]
ref #6347 remove enable from sorting alternatives and use lower case where appropriate

6 years agoref #6315 adapt labels for setSecundumForSubtree
Andreas Müller [Fri, 22 Sep 2017 16:29:41 +0000 (18:29 +0200)]
ref #6315 adapt labels for setSecundumForSubtree

6 years agoref #6315 adapt labels for setSecundumForSubtree
Andreas Müller [Fri, 22 Sep 2017 16:25:36 +0000 (18:25 +0200)]
ref #6315 adapt labels for setSecundumForSubtree

6 years agoMerge branch 'develop' into bulkEditorE4
Patrick Plitzner [Fri, 22 Sep 2017 15:43:41 +0000 (17:43 +0200)]
Merge branch 'develop' into bulkEditorE4

# Conflicts:
# eu.etaxonomy.taxeditor.editor/META-INF/MANIFEST.MF
# eu.etaxonomy.taxeditor.editor/src/main/java/eu/etaxonomy/taxeditor/editor/view/concept/e4/ConceptViewPartE4.java
# eu.etaxonomy.taxeditor.editor/src/main/java/eu/etaxonomy/taxeditor/editor/view/descriptive/e4/FactualDataPartE4.java
# eu.etaxonomy.taxeditor.editor/src/main/java/eu/etaxonomy/taxeditor/editor/view/media/e4/MediaViewPartE4.java
# eu.etaxonomy.taxeditor.navigation/src/main/java/eu/etaxonomy/taxeditor/navigation/navigator/e4/handler/DeleteHandlerE4.java
# eu.etaxonomy.taxeditor.navigation/src/main/java/eu/etaxonomy/taxeditor/navigation/navigator/e4/handler/RemotingDeleteTaxonNodeHandlerE4.java
# eu.etaxonomy.taxeditor.navigation/src/main/java/eu/etaxonomy/taxeditor/navigation/navigator/e4/handler/RemotingMoveTaxonNodeHandlerE4.java
# eu.etaxonomy.taxeditor.navigation/src/main/java/eu/etaxonomy/taxeditor/navigation/navigator/handler/SetSecReferenceForSubtreeHandler.java
# eu.etaxonomy.taxeditor.store/src/main/java/eu/etaxonomy/taxeditor/ui/section/taxon/TaxonRelationshipDetailElement.java
# eu.etaxonomy.taxeditor.store/src/main/java/eu/etaxonomy/taxeditor/view/e4/AbstractCdmEditorPartE4.java

6 years agoref #6925 Fix potential NPE
Patrick Plitzner [Fri, 22 Sep 2017 13:40:56 +0000 (15:40 +0200)]
ref #6925 Fix potential NPE