taxeditor.git
8 years ago - checked in previously deleted eclipse jar files (see #4227)
Patric Plitzner [Wed, 28 May 2014 13:45:48 +0000 (13:45 +0000)]
 - checked in previously deleted eclipse jar files (see #4227)

8 years agomove the taxon bulk editor entry to names group in menu
Katja Luther [Wed, 28 May 2014 12:31:41 +0000 (12:31 +0000)]
move the taxon bulk editor entry to names group in menu

8 years agocatch NPE #4228
Katja Luther [Wed, 28 May 2014 12:14:18 +0000 (12:14 +0000)]
catch NPE #4228

8 years ago - removed test code
Patric Plitzner [Wed, 28 May 2014 10:57:23 +0000 (10:57 +0000)]
 - removed test code

8 years ago - removed eclipse jars from svn:ignore because of too much trouble (see #4227)
Patric Plitzner [Wed, 28 May 2014 09:44:30 +0000 (09:44 +0000)]
 - removed eclipse jars from svn:ignore because of too much trouble (see #4227)

8 years ago - adapted to interface changes in cdmlib
Patric Plitzner [Wed, 28 May 2014 09:40:24 +0000 (09:40 +0000)]
 - adapted to interface changes in cdmlib

8 years ago - checked in previously deleted .classpath file (see #4227)
Patric Plitzner [Wed, 28 May 2014 09:29:41 +0000 (09:29 +0000)]
 - checked in previously deleted .classpath file (see #4227)

8 years ago - removed .classpath from svn:ignore because of too much trouble (see #4227)
Patric Plitzner [Wed, 28 May 2014 09:28:22 +0000 (09:28 +0000)]
 - removed .classpath from svn:ignore because of too much trouble (see #4227)

8 years ago(no commit message)
Katja Luther [Wed, 28 May 2014 09:27:35 +0000 (09:27 +0000)]

8 years ago - added new DataImportEditor for GbifResponses
Patric Plitzner [Wed, 28 May 2014 08:57:39 +0000 (08:57 +0000)]
 - added new DataImportEditor for GbifResponses
  - allows querying for original record via context menu

8 years ago - fixed refresh problem for SpecimenImportEditor
Patric Plitzner [Tue, 27 May 2014 08:24:41 +0000 (08:24 +0000)]
 - fixed refresh problem for SpecimenImportEditor

8 years ago - adapted info text for import wizard
Patric Plitzner [Mon, 26 May 2014 15:08:44 +0000 (15:08 +0000)]
 - adapted info text for import wizard
 - added toggle button for date field

8 years ago - removed parse logic because it was moved to cdmlib-ext
Patric Plitzner [Mon, 26 May 2014 10:32:39 +0000 (10:32 +0000)]
 - removed parse logic because it was moved to cdmlib-ext

8 years ago - removed debug/test code
Patric Plitzner [Mon, 26 May 2014 10:32:13 +0000 (10:32 +0000)]
 - removed debug/test code

8 years ago - added date support for query parameter in specimen search
Patric Plitzner [Thu, 22 May 2014 14:14:34 +0000 (14:14 +0000)]
 - added date support for query parameter in specimen search
 - linked some more query parameters

8 years ago - extended specimen search with provider selection (GBIF, BioCase)
Patric Plitzner [Thu, 22 May 2014 06:59:36 +0000 (06:59 +0000)]
 - extended specimen search with provider selection (GBIF, BioCase)

8 years ago - added some JSON to java conversion code
Patric Plitzner [Wed, 21 May 2014 11:18:35 +0000 (11:18 +0000)]
 - added some JSON to java conversion code

8 years ago - added eclipse jars and .classpath file which are automatically generated by ...
Patric Plitzner [Wed, 21 May 2014 09:09:27 +0000 (09:09 +0000)]
 - added  eclipse jars and .classpath file which are automatically generated by "mvn clean validate" and the eclipse function "Update classpath" to svn:ignore

8 years ago - deleted eclipse jars and .classpath file which are automatically generated by...
Patric Plitzner [Wed, 21 May 2014 09:02:27 +0000 (09:02 +0000)]
 - deleted  eclipse jars and .classpath file which are automatically generated by "mvn clean validate" and the eclipse function "Update classpath"

8 years ago - exported missing package
Patric Plitzner [Wed, 21 May 2014 07:57:08 +0000 (07:57 +0000)]
 - exported missing package

8 years ago - wrapped DerivateView selection to pass a handle on one DerivateView when dragging...
Patric Plitzner [Wed, 21 May 2014 07:44:29 +0000 (07:44 +0000)]
 - wrapped DerivateView selection to pass a handle on one DerivateView when dragging into another allowing refresh on that view

8 years ago - refactored BioCaseQuery to more generic OccurrenceQuery
Patric Plitzner [Wed, 21 May 2014 07:43:39 +0000 (07:43 +0000)]
 - refactored BioCaseQuery to more generic OccurrenceQuery
  - for import wizard
  - for DataImportEditor
 - exported new cdmlib package structure for gbif and biocase querying in taxeditor.cdmlib

8 years agofix TransienTaxonService
Andreas Müller [Tue, 20 May 2014 16:57:15 +0000 (16:57 +0000)]
fix TransienTaxonService

8 years agoupdate new generic services in TaxEditor #4224
Andreas Müller [Tue, 20 May 2014 11:12:31 +0000 (11:12 +0000)]
update new generic services in TaxEditor  #4224

8 years ago - Increased version number in .classpath file (should be done automatically by maven)
Patric Plitzner [Tue, 20 May 2014 10:01:16 +0000 (10:01 +0000)]
 - Increased version number in .classpath file (should be done automatically by maven)

8 years agofix NPE in GroupBasionymContributionItem
Andreas Müller [Thu, 15 May 2014 16:26:36 +0000 (16:26 +0000)]
fix NPE in GroupBasionymContributionItem

8 years agofix NPE for unselected feature tree
Andreas Müller [Thu, 15 May 2014 15:59:06 +0000 (15:59 +0000)]
fix NPE for unselected feature tree

8 years agofix transient term service
Andreas Müller [Thu, 15 May 2014 12:52:40 +0000 (12:52 +0000)]
fix transient term service

8 years agoUpdated version in config files to 3.3.5-SNAPSHOT
edit-jenkins [Wed, 14 May 2014 11:22:51 +0000 (11:22 +0000)]
Updated version in config files to 3.3.5-SNAPSHOT

8 years agoUpdated version in config files to 3.3.4
edit-jenkins [Wed, 14 May 2014 11:16:16 +0000 (11:16 +0000)]
Updated version in config files to 3.3.4

8 years ago - reverted unwanted merge of branch code
Patric Plitzner [Wed, 14 May 2014 08:09:09 +0000 (08:09 +0000)]
 - reverted unwanted merge of branch code

8 years ago - only allow dragging in DerivateView when view is not dirty
Patric Plitzner [Wed, 14 May 2014 07:18:25 +0000 (07:18 +0000)]
 - only allow dragging in DerivateView when view is not dirty
 - added missing methods to transient services
 - exposed dto package in cdmlib project
 - some renaming

8 years ago - minor refactoring
Patric Plitzner [Tue, 13 May 2014 15:02:00 +0000 (15:02 +0000)]
 - minor refactoring

8 years ago - disabling event handling for DetailsView of TissueSample
Patric Plitzner [Tue, 13 May 2014 13:55:29 +0000 (13:55 +0000)]
 - disabling event handling for DetailsView of TissueSample

8 years agosetting name in case of editing datasource
Cherian Mathew [Tue, 13 May 2014 10:29:26 +0000 (10:29 +0000)]
setting name in case of editing datasource

8 years ago - fixed toggling of title cache lock
Patric Plitzner [Thu, 8 May 2014 08:35:31 +0000 (08:35 +0000)]
 - fixed toggling of title cache lock

8 years agoremmoved setting of database name to empty when cloning
Cherian Mathew [Thu, 8 May 2014 08:30:39 +0000 (08:30 +0000)]
remmoved setting of database name to empty when cloning

8 years agomake lineSeparator 1.6 compatibel again
Andreas Müller [Wed, 7 May 2014 15:07:28 +0000 (15:07 +0000)]
make lineSeparator 1.6 compatibel again

8 years agoadded new constructor with mode argument for wizard pages and deprecated the old...
Cherian Mathew [Wed, 7 May 2014 08:59:07 +0000 (08:59 +0000)]
added new constructor with mode argument for wizard pages and deprecated the old constructor.
CdmDataSourceWizard and CdmDataSourceTypeSelectionWizardPage now call the new constructor.

8 years agorefactoring to cdm source
Cherian Mathew [Tue, 6 May 2014 14:54:38 +0000 (14:54 +0000)]
refactoring to cdm source

8 years agorefactoring cdm data source to cdm source
Cherian Mathew [Tue, 6 May 2014 14:53:28 +0000 (14:53 +0000)]
refactoring cdm data source to cdm source
plugin.xml : added clone menu item / command

8 years ago.classpath : added test resources in classpath
Cherian Mathew [Tue, 6 May 2014 14:45:58 +0000 (14:45 +0000)]
.classpath : added test resources in classpath
CdmPersistentRemoteSourceTest : added new tests for remote source connection
CdmRemoteSourceBase : added code to connect to the target database (before initialising the full application context) to retrieve metadata
CdmRemoteSource, CdmPersistentRemoteSource : added required methods
remotingApplicationContext : optimisations

8 years agorefactored wizard dialog and pages to allow for easy in place editing and cloning...
Cherian Mathew [Tue, 6 May 2014 14:37:45 +0000 (14:37 +0000)]
refactored wizard dialog and pages to allow for easy in place editing and cloning of datasources.
CdmDataSourceRepository : added methods for (I)PersistentRemoteSource

8 years agorefactoring to change the specific (I)CdmDataSource to the more generic (I)CdmSource...
Cherian Mathew [Tue, 6 May 2014 14:32:28 +0000 (14:32 +0000)]
refactoring to change the specific (I)CdmDataSource to the more generic (I)CdmSource to prepare fro remoting
CloneDataSourceHandler : new handler to clone a datasource

8 years agoadding a taxon bulk editor and changes because the delete methods does not throw...
Katja Luther [Mon, 5 May 2014 13:01:16 +0000 (13:01 +0000)]
adding a taxon bulk editor and changes because the delete methods does not throw exceptions anymore

8 years ago - simplified showParts() method in DetailsViewer for showing empty page
Patric Plitzner [Tue, 29 Apr 2014 13:55:58 +0000 (13:55 +0000)]
 - simplified showParts() method in DetailsViewer for showing empty page

8 years ago - increased cdmlib version number in .classpath file to 3.3.4
Patric Plitzner [Wed, 23 Apr 2014 12:27:23 +0000 (12:27 +0000)]
 - increased cdmlib version number in .classpath file to 3.3.4

8 years agoUpdated version in config files to 3.3.4-SNAPSHOT
edit-jenkins [Wed, 16 Apr 2014 15:26:36 +0000 (15:26 +0000)]
Updated version in config files to 3.3.4-SNAPSHOT

8 years agoUpdated version in config files to 3.3.3
edit-jenkins [Wed, 16 Apr 2014 15:21:57 +0000 (15:21 +0000)]
Updated version in config files to 3.3.3

8 years ago - renamed TextWithLabelElement to avoid import/name conflicts (ma be renamed if...
Patric Plitzner [Tue, 15 Apr 2014 08:20:04 +0000 (08:20 +0000)]
 - renamed TextWithLabelElement to avoid import/name conflicts (ma be renamed if we fully refactor using MVC pattern)

8 years ago - removed unused PropertyTester
Patric Plitzner [Tue, 15 Apr 2014 08:18:09 +0000 (08:18 +0000)]
 - removed unused PropertyTester

8 years ago - added interfaces and classes for MVC pattern
Patric Plitzner [Tue, 15 Apr 2014 08:14:22 +0000 (08:14 +0000)]
 - added interfaces and classes for MVC pattern
 - implemented/adapted MVC pattern for TextWithLabelElement and EnumTermCombo element

8 years ago - fixed FactualData view to show data for selection of DerivateView
Patric Plitzner [Tue, 15 Apr 2014 07:19:21 +0000 (07:19 +0000)]
 - fixed FactualData view to show data for selection of DerivateView
 - renamed util method

8 years agoUpdated version in config files to 3.3.3-SNAPSHOT
edit-jenkins [Fri, 11 Apr 2014 15:37:16 +0000 (15:37 +0000)]
Updated version in config files to 3.3.3-SNAPSHOT

8 years agoUpdated version in config files to 3.3.2
edit-jenkins [Fri, 11 Apr 2014 15:30:18 +0000 (15:30 +0000)]
Updated version in config files to 3.3.2

8 years ago - commented "Original Label Data" text field because it is not yet used in trunk
Patric Plitzner [Thu, 10 Apr 2014 06:38:49 +0000 (06:38 +0000)]
 - commented "Original Label Data" text field because it is not yet used in trunk

8 years agoCdmStore : no longer need to set configuration in hibernate classes here
Cherian Mathew [Wed, 9 Apr 2014 14:23:23 +0000 (14:23 +0000)]
CdmStore : no longer need to set configuration in hibernate classes here
CdmStoreConnector : new method to retrieve configuration based on cdm source type

8 years agoCdmPersistentRemoteSource : implemented all source methods including save and delete
Cherian Mathew [Wed, 9 Apr 2014 14:19:16 +0000 (14:19 +0000)]
CdmPersistentRemoteSource : implemented all source methods including save and delete
CdmRemoteSourceException : new exception to deal with cdm source errors
CdmRemoteSourceBase : added default constructor

8 years agoCdmApplicationRemoteController : directly loads CdmApplicationRemoteConfiguration...
Cherian Mathew [Wed, 9 Apr 2014 14:16:59 +0000 (14:16 +0000)]
CdmApplicationRemoteController : directly loads CdmApplicationRemoteConfiguration bean and sets configuration in hibernate classes
CdmApplicationRemoteConfiguration : no longer need the bean name hack due to update in CdmApplicationRemoteController

8 years agoisRemoting is no longer based on a bean in the application context, but
Cherian Mathew [Wed, 9 Apr 2014 14:15:16 +0000 (14:15 +0000)]
isRemoting is no longer based on a bean in the application context, but
the type of cdm source

8 years agoisRemoting is no longer based on a bean in the application context, but
Cherian Mathew [Wed, 9 Apr 2014 14:13:46 +0000 (14:13 +0000)]
isRemoting is no longer based on a bean in the application context, but
the type of cdm source

8 years agocdm.datasources.xml : added test sources settings file
Cherian Mathew [Wed, 9 Apr 2014 14:09:21 +0000 (14:09 +0000)]
cdm.datasources.xml : added test sources settings file
CdmRemoteSourceTest, RemoteLazyLoadingTest : updated tests
HttpInvokerServicesTest, CdmPersistentRemoteSourceTest, CdmApplicationRemoteControllerTest : new test classes for remoting
RemoteApplicationConfigurationTest : no longer a real test, but a super class for remote tests

8 years ago - fixed link to online svn repo
Patric Plitzner [Wed, 9 Apr 2014 08:15:26 +0000 (08:15 +0000)]
 - fixed link to online svn repo

8 years ago - added memento restore mechanism to DerivateView (partially)
Patric Plitzner [Tue, 8 Apr 2014 06:53:41 +0000 (06:53 +0000)]
 - added memento restore mechanism to DerivateView (partially)

8 years ago - set default derivate typ filter to "unknown"
Patric Plitzner [Tue, 8 Apr 2014 06:53:11 +0000 (06:53 +0000)]
 - set default derivate typ filter to "unknown"

8 years ago - javadoc
Patric Plitzner [Tue, 8 Apr 2014 06:52:45 +0000 (06:52 +0000)]
 - javadoc

8 years ago - refresh view instead of setting the editor input
Patric Plitzner [Mon, 7 Apr 2014 11:11:39 +0000 (11:11 +0000)]
 - refresh view instead of setting the editor input

8 years ago - cleaned DerivateView context menu code and classes
Patric Plitzner [Mon, 7 Apr 2014 09:43:10 +0000 (09:43 +0000)]
 - cleaned DerivateView context menu code and classes

8 years ago - partially added handling of input fields
Patric Plitzner [Mon, 7 Apr 2014 09:42:22 +0000 (09:42 +0000)]
 - partially added handling of input fields

8 years agoadded new remote package
Cherian Mathew [Fri, 4 Apr 2014 16:09:47 +0000 (16:09 +0000)]
added new remote package

8 years agocomments and javadoc
Cherian Mathew [Fri, 4 Apr 2014 15:42:38 +0000 (15:42 +0000)]
comments and javadoc

8 years agoremoved repeated call to get all cdm sources
Cherian Mathew [Fri, 4 Apr 2014 09:42:25 +0000 (09:42 +0000)]
removed repeated call to get all cdm sources

8 years agoupdating to align with refactored cdm source classes / interfaces
Cherian Mathew [Fri, 4 Apr 2014 09:41:10 +0000 (09:41 +0000)]
updating to align with refactored cdm source classes / interfaces

8 years agoAdding CDM Remote Source set of classes to allow editor to connect to a remote cdmserver
Cherian Mathew [Fri, 4 Apr 2014 09:28:07 +0000 (09:28 +0000)]
Adding CDM Remote Source set of classes to allow editor to connect to a remote cdmserver

8 years agoCdmApplicationRemoteConfiguration : removed spring bean name hack, since we now have...
Cherian Mathew [Fri, 4 Apr 2014 09:27:04 +0000 (09:27 +0000)]
CdmApplicationRemoteConfiguration : removed spring bean name hack, since we now have a new controller
CdmApplicationRemoteController : new Controller class to handle remoting
AbstractLazyInitializer / AbstractPersistentCollection : added missing methods to check if proxy object is initialized
CdmRemoteSourceTest : Added new test class to test the CDM Remote Source
httpInvokerServiceClients.xml : added primer service

8 years ago - refactored context menu for DerivateView to be programmatic instead of declarative...
Patric Plitzner [Wed, 2 Apr 2014 14:08:30 +0000 (14:08 +0000)]
 - refactored context menu for DerivateView to be programmatic instead of declarative (using plugin.xml)
 - fixed icon bug for DerivateSearchView

8 years ago - only show Copy/Paste context menu for SingleRead/Sequence
Patric Plitzner [Wed, 2 Apr 2014 11:01:53 +0000 (11:01 +0000)]
 - only show Copy/Paste context menu for SingleRead/Sequence

8 years ago - added update() method to DerivateView
Patric Plitzner [Wed, 2 Apr 2014 09:37:31 +0000 (09:37 +0000)]
 - added update() method to DerivateView
 - display different icon for SingleReads linked to multiple Sequences

8 years ago - added util method to get the TreeNode out of a selection
Patric Plitzner [Wed, 2 Apr 2014 07:55:16 +0000 (07:55 +0000)]
 - added util method to get the TreeNode out of a selection

8 years ago - added Copy/Paste for SingleRead->Sequence to DerivateView
Patric Plitzner [Tue, 1 Apr 2014 15:14:26 +0000 (15:14 +0000)]
 - added Copy/Paste for SingleRead->Sequence to DerivateView
   - copying actually just creates a link

8 years ago - fixed user message
Patric Plitzner [Tue, 1 Apr 2014 08:03:12 +0000 (08:03 +0000)]
 - fixed user message

8 years ago - added gel photo detail element to Amplification wizard
Patric Plitzner [Tue, 1 Apr 2014 07:44:46 +0000 (07:44 +0000)]
 - added gel photo detail element to Amplification wizard

8 years ago - removed Amplification as a TreeNode from the DerivateView
Patric Plitzner [Tue, 1 Apr 2014 06:51:22 +0000 (06:51 +0000)]
 - removed Amplification as a TreeNode from the DerivateView
 - added Amplification to DetailsView of SingleRead as an EntitySelectionElement

8 years ago - fixed javadoc
Patric Plitzner [Tue, 1 Apr 2014 06:49:18 +0000 (06:49 +0000)]
 - fixed javadoc

8 years ago - organize imports for new molecular services
Patric Plitzner [Mon, 31 Mar 2014 12:19:33 +0000 (12:19 +0000)]
 - organize imports for new molecular services

8 years ago - fix cdmlib version number in .classpath (why does maven not generate this anymore?)
Patric Plitzner [Mon, 31 Mar 2014 12:19:17 +0000 (12:19 +0000)]
 - fix cdmlib version number in .classpath (why does maven not generate this anymore?)
 - added "molecular" package to exported packages
 - organize imports for new molecular services

8 years ago - used "move derivate" methods of service layer
Patric Plitzner [Mon, 31 Mar 2014 08:10:36 +0000 (08:10 +0000)]
 - used "move derivate" methods of service layer
 - added java doc

8 years agoUpdated version in config files to 3.3.2-SNAPSHOT
edit-jenkins [Fri, 28 Mar 2014 17:01:09 +0000 (17:01 +0000)]
Updated version in config files to 3.3.2-SNAPSHOT

8 years agoUpdated version in config files to 3.3.1
edit-jenkins [Fri, 28 Mar 2014 16:28:13 +0000 (16:28 +0000)]
Updated version in config files to 3.3.1

8 years ago - moved move-logic to occurrence service layer
Patric Plitzner [Wed, 26 Mar 2014 14:37:30 +0000 (14:37 +0000)]
 - moved move-logic to occurrence service layer

8 years ago - reset input fields of DerivateSearchView when context stops
Patric Plitzner [Wed, 26 Mar 2014 12:35:41 +0000 (12:35 +0000)]
 - reset input fields of DerivateSearchView when context stops

8 years ago - added drag'n'drop support for Sequences
Patric Plitzner [Wed, 26 Mar 2014 07:39:46 +0000 (07:39 +0000)]
 - added drag'n'drop support for Sequences
 - added context listener to DerivateSearchView
 - refactored MVC pattern of DerivateSearchView

8 years ago - added support for SingleRead drag'n'drop
Patric Plitzner [Tue, 25 Mar 2014 16:08:44 +0000 (16:08 +0000)]
 - added support for SingleRead drag'n'drop

8 years ago - implemented drag'n'drop support for SpecimenOrObservationBase in Derivate View
Patric Plitzner [Tue, 25 Mar 2014 13:30:25 +0000 (13:30 +0000)]
 - implemented drag'n'drop support for SpecimenOrObservationBase in Derivate View

8 years ago - minor
Patric Plitzner [Tue, 25 Mar 2014 08:35:04 +0000 (08:35 +0000)]
 - minor

8 years ago - minor enhancement
Patric Plitzner [Mon, 24 Mar 2014 15:10:51 +0000 (15:10 +0000)]
 - minor enhancement

8 years ago - added timeout to internet availability check
Patric Plitzner [Mon, 24 Mar 2014 13:24:08 +0000 (13:24 +0000)]
 - added timeout to internet availability check

8 years ago - fixed ClassCastException for FeatureNodeContainers
Patric Plitzner [Mon, 24 Mar 2014 13:23:36 +0000 (13:23 +0000)]
 - fixed ClassCastException for FeatureNodeContainers

8 years ago - added basic drag'n'drop support to DerivateView
Patric Plitzner [Mon, 24 Mar 2014 10:39:36 +0000 (10:39 +0000)]
 - added basic drag'n'drop support to DerivateView

8 years agoadded more tests for both lazy loading entities and collections
Cherian Mathew [Thu, 20 Mar 2014 15:20:24 +0000 (15:20 +0000)]
added more tests for both lazy loading entities and collections