Patric Plitzner [Tue, 5 Aug 2014 12:12:40 +0000 (12:12 +0000)]
merge-update from trunk
Patric Plitzner [Tue, 5 Aug 2014 11:46:59 +0000 (11:46 +0000)]
- fixed bug that showed double or no '&' (#4302)
b.stoever [Tue, 5 Aug 2014 09:25:31 +0000 (09:25 +0000)]
Test version of an AlignmentArea added to AlignmentEditor.
Dependencies of LibrAlign added in provisional form.
During initial development stage you need to check out the following two additional project into your workspace:
- bioinfweb.commons as "_Lib" from https://secure.bioinfweb.info/Code/svn/commons.java/trunk/main/
- LibrAlign as "LibrAlign" from https://secure.nefertem.bioinfweb.info/private/svn/LibrAlign/trunk/main/
(These dependencies will be replaced by JARs after the initial development phase of this branch.)
Patric Plitzner [Mon, 4 Aug 2014 12:51:01 +0000 (12:51 +0000)]
merge-update from trunk
Andreas Müller [Mon, 4 Aug 2014 11:46:15 +0000 (11:46 +0000)]
LockMode issues in transient services
Patric Plitzner [Mon, 4 Aug 2014 10:05:09 +0000 (10:05 +0000)]
merge-update from trunk
Patric Plitzner [Mon, 4 Aug 2014 09:42:01 +0000 (09:42 +0000)]
- added empty AlignmentEditor
Patric Plitzner [Thu, 31 Jul 2014 18:11:02 +0000 (18:11 +0000)]
creating taxeditor branch for LibrAlign integration
Katja Luther [Wed, 30 Jul 2014 12:09:55 +0000 (12:09 +0000)]
adaption for error handling of delete methods
Alexander Oppermann [Wed, 16 Jul 2014 09:29:46 +0000 (09:29 +0000)]
removed style parameter for combobox. Quick fix for ticket #4289. Needs to be reviewed.
Cherian Mathew [Fri, 11 Jul 2014 13:48:29 +0000 (13:48 +0000)]
creating new instance of key statement with existing text in the case of copy/paste
Andreas Müller [Wed, 9 Jul 2014 15:44:16 +0000 (15:44 +0000)]
rename getByIdInVocabulary
edit-jenkins [Tue, 8 Jul 2014 13:34:52 +0000 (13:34 +0000)]
Updated version in config files to 3.3.7-SNAPSHOT
edit-jenkins [Tue, 8 Jul 2014 13:20:37 +0000 (13:20 +0000)]
Updated version in config files to 3.3.6
Andreas Kohlbecker [Tue, 8 Jul 2014 07:52:36 +0000 (07:52 +0000)]
adapting TransientTermService to code cleaning in TermService
Andreas Kohlbecker [Tue, 8 Jul 2014 07:52:33 +0000 (07:52 +0000)]
ignoring bin folder in eu.etaxonomy.taxeditor.cdmlib
Patric Plitzner [Thu, 3 Jul 2014 13:36:19 +0000 (13:36 +0000)]
- generalized adding MediaSpecimen in DerivateView
Patric Plitzner [Thu, 3 Jul 2014 12:32:59 +0000 (12:32 +0000)]
- added support for term retrieval by TermVocabulary
- adapted MediaSpecimen DetailsView
Patric Plitzner [Thu, 3 Jul 2014 08:36:58 +0000 (08:36 +0000)]
- reload last entered access point in wizard space
- added validation to access point text field
Patric Plitzner [Thu, 3 Jul 2014 08:36:10 +0000 (08:36 +0000)]
- reload last entered access point in wizard space
- added validation to access point text field
Cherian Mathew [Fri, 27 Jun 2014 09:57:30 +0000 (09:57 +0000)]
CdmServiceCacher : Added class to load / cache CDM entities using services
remotingApplicationContext : updated cacher bean config
httpInvokerServiceClients : removed unnecessary loading of remote config
CdmServiceCacherTest : added cacher test
Cherian Mathew [Thu, 26 Jun 2014 15:22:06 +0000 (15:22 +0000)]
implementing findWithoutFlush method in transient services
Katja Luther [Thu, 26 Jun 2014 08:51:46 +0000 (08:51 +0000)]
fix delete polytomous key node
Katja Luther [Thu, 26 Jun 2014 08:37:25 +0000 (08:37 +0000)]
fix a warning "Prevented recursive attempt to activate part..."
Cherian Mathew [Wed, 25 Jun 2014 17:24:00 +0000 (17:24 +0000)]
updating ehcache to 2.6.9
Cherian Mathew [Wed, 25 Jun 2014 15:34:13 +0000 (15:34 +0000)]
added PostFix to memento to distinguish between remote and data source
Cherian Mathew [Wed, 25 Jun 2014 15:33:15 +0000 (15:33 +0000)]
replaced static term initialisation methods with newly added cdmCacher driven methods
Cherian Mathew [Wed, 25 Jun 2014 15:15:10 +0000 (15:15 +0000)]
remotingApplicationContext : added CdmCacher as bean to be initialised
META-INF/MANIFEST.MF, .classpath, lib/ehcache-core-2.4.3.jar, lib/ehcache-core-2.6.9.jar: replaced ehcache-core-2.4.3 with ehcache-core-2.6.9 for the CdmCacher.
It seems that even though hibernate-ehcache-4.1.10.Final is embedded with ehcache-core-2.4.3, it is compatible with ehcache-core-2.6.9 according to http://architects.dzone.com/articles/hibernate-4-and-ehcache-higher.
Andreas Müller [Tue, 24 Jun 2014 14:52:32 +0000 (14:52 +0000)]
improved handling for missing representation for certain language #4249
Katja Luther [Tue, 24 Jun 2014 12:26:43 +0000 (12:26 +0000)]
#4244 fixed
Katja Luther [Tue, 24 Jun 2014 09:44:50 +0000 (09:44 +0000)]
open Taxonpage with single click in taxonnavigator
Katja Luther [Tue, 24 Jun 2014 08:55:24 +0000 (08:55 +0000)]
Katja Luther [Tue, 24 Jun 2014 08:52:59 +0000 (08:52 +0000)]
fix #4249
Katja Luther [Tue, 24 Jun 2014 07:49:27 +0000 (07:49 +0000)]
skip the dialog for setting the default nomenclatural code. The default is the botanical code.
Katja Luther [Thu, 19 Jun 2014 13:25:51 +0000 (13:25 +0000)]
minor
Katja Luther [Thu, 19 Jun 2014 13:07:54 +0000 (13:07 +0000)]
- not running imports and exports deleted from menu
- preferences for concept relations fixed
- open taxon editor with one click in taxon navigator
Patric Plitzner [Thu, 19 Jun 2014 12:39:11 +0000 (12:39 +0000)]
- removed debug output
- made DerivateLabelProvider use occurrence service
Patric Plitzner [Thu, 19 Jun 2014 12:38:25 +0000 (12:38 +0000)]
- fixed class cast exception
Patric Plitzner [Thu, 19 Jun 2014 07:45:46 +0000 (07:45 +0000)]
- removed branch code from trunk
Patric Plitzner [Thu, 19 Jun 2014 07:08:47 +0000 (07:08 +0000)]
- saved last parameters entered for specimen search
Patric Plitzner [Thu, 19 Jun 2014 07:06:57 +0000 (07:06 +0000)]
- fixed potential NPE
Patric Plitzner [Wed, 18 Jun 2014 13:37:25 +0000 (13:37 +0000)]
- commented workbenchShutdown() content
Patric Plitzner [Wed, 18 Jun 2014 13:34:58 +0000 (13:34 +0000)]
- removed TextReadOnly (#4254)
- just used a Text field with "editable" flag set to false
- added dummy title cache text as section header
- just showing the first 10 characters
Katja Luther [Wed, 18 Jun 2014 12:16:35 +0000 (12:16 +0000)]
editor changes for red list project (datasource view and create new datasource from file menu)
Patric Plitzner [Wed, 18 Jun 2014 07:14:53 +0000 (07:14 +0000)]
- added section for "Original Label Data" to DetailsView (#4254)
Patric Plitzner [Wed, 18 Jun 2014 07:09:48 +0000 (07:09 +0000)]
- added java doc
Patric Plitzner [Wed, 18 Jun 2014 07:08:36 +0000 (07:08 +0000)]
- fixed potential session exceptions during closing/saving
Patric Plitzner [Wed, 18 Jun 2014 07:07:42 +0000 (07:07 +0000)]
- changed error dialog text
Patric Plitzner [Wed, 18 Jun 2014 07:06:06 +0000 (07:06 +0000)]
- added "Detail Image" icon to ImageResources
Andreas Müller [Tue, 17 Jun 2014 14:20:36 +0000 (14:20 +0000)]
fix idInVocabulary #4243
Patric Plitzner [Tue, 17 Jun 2014 14:09:22 +0000 (14:09 +0000)]
- added icon for "Detail Image"
Patric Plitzner [Tue, 17 Jun 2014 14:09:04 +0000 (14:09 +0000)]
- added feedback if drag&drop in DerivateVie does not work
Patric Plitzner [Tue, 17 Jun 2014 13:22:10 +0000 (13:22 +0000)]
- added specimen scan icon
- save kindOfUnit
Patric Plitzner [Tue, 17 Jun 2014 12:22:28 +0000 (12:22 +0000)]
- added "Published in" parameter to MediaSpecimen DetailsView (#4239)
Patric Plitzner [Tue, 17 Jun 2014 07:27:02 +0000 (07:27 +0000)]
- added missing parameters to MediaSpecimen DetailsView (#4239)
Andreas Müller [Mon, 16 Jun 2014 15:30:30 +0000 (15:30 +0000)]
update New menu in TaxEditor
Andreas Müller [Mon, 16 Jun 2014 15:23:15 +0000 (15:23 +0000)]
update New menu in TaxEditor
Patric Plitzner [Mon, 16 Jun 2014 09:44:16 +0000 (09:44 +0000)]
Removed deleted command classes from plugin.xml
Patric Plitzner [Mon, 16 Jun 2014 09:41:09 +0000 (09:41 +0000)]
- refactored DataImportEditor context menu
- removed extension point in plugin.xml
- added dynamic context menu
Patric Plitzner [Mon, 16 Jun 2014 09:39:02 +0000 (09:39 +0000)]
- fixed potential hibernate exception when trying to close the editor (check if conversation is bound before closing it)
Patric Plitzner [Mon, 16 Jun 2014 09:29:24 +0000 (09:29 +0000)]
- removed unnecessary code
Patric Plitzner [Mon, 16 Jun 2014 09:28:23 +0000 (09:28 +0000)]
- added functionality to determination section to add determinations to FieldUnits also (#4252)
Patric Plitzner [Mon, 16 Jun 2014 08:57:24 +0000 (08:57 +0000)]
- added functionality to filter assigned specimens in the DerivateSearchView (fixes #4252)
Patric Plitzner [Mon, 16 Jun 2014 08:55:02 +0000 (08:55 +0000)]
- add placeholder for Media label
Patric Plitzner [Mon, 16 Jun 2014 08:53:12 +0000 (08:53 +0000)]
- list "Specimen Details" second in DetailsView (only for campanula, fixes #4235)
Patric Plitzner [Wed, 11 Jun 2014 15:16:30 +0000 (15:16 +0000)]
- added new dynamic context menu for DerivateSearchView
- cleaned up code
Patric Plitzner [Wed, 11 Jun 2014 07:46:20 +0000 (07:46 +0000)]
- fixed comment
Patric Plitzner [Wed, 11 Jun 2014 07:28:56 +0000 (07:28 +0000)]
- fixed TransientObjectException when adding and saving a scope for a TaxonDescription (fixes #2607)
- made use of AbstractUnboundEntityCollectionsection
- a DefinedTerm will not be created but selected from a list of existing ones
Patric Plitzner [Wed, 11 Jun 2014 07:23:48 +0000 (07:23 +0000)]
- added conversation/session support to DerivateLabelProvider
- GUI widgets using the provider need to provide a conversation/session to avoid LazyInitializationException
Katja Luther [Wed, 11 Jun 2014 07:23:10 +0000 (07:23 +0000)]
Patric Plitzner [Tue, 10 Jun 2014 11:56:25 +0000 (11:56 +0000)]
- set CdmFormFactory.createTermComboElement() to deprecated
- replaced (almost) all uses of the method with CdmFormFactory.createDefinedTermComboElement which works with TermType instead of classes
Katja Luther [Tue, 10 Jun 2014 11:47:04 +0000 (11:47 +0000)]
Patric Plitzner [Tue, 10 Jun 2014 11:20:12 +0000 (11:20 +0000)]
- added dispose check because in some undefined circumstances the setBackground() method was invoked but the label was already disposed
Katja Luther [Tue, 10 Jun 2014 11:06:59 +0000 (11:06 +0000)]
fixed Ticket #4243
Andreas Müller [Fri, 6 Jun 2014 21:06:39 +0000 (21:06 +0000)]
remove deprecated method
Katja Luther [Wed, 4 Jun 2014 12:09:23 +0000 (12:09 +0000)]
#4242 delete MA
Patric Plitzner [Wed, 4 Jun 2014 09:35:29 +0000 (09:35 +0000)]
- implemented differentiation of the three image types (Artwork, Living Plant Photo, Specimen Scan) in the DerivateView and DetailsView
Patric Plitzner [Wed, 4 Jun 2014 09:30:11 +0000 (09:30 +0000)]
- fixed copy&paste mistake (but the image file still needs to be made)
Patric Plitzner [Wed, 4 Jun 2014 09:29:24 +0000 (09:29 +0000)]
- added missing @Override annotation
Patric Plitzner [Tue, 3 Jun 2014 14:35:46 +0000 (14:35 +0000)]
- implemented derivate specific textual representation in DerivateView
Katja Luther [Tue, 3 Jun 2014 10:01:45 +0000 (10:01 +0000)]
misappliedName can be created directly from the accepted Taxon in TaxonNameEditor
Patric Plitzner [Mon, 2 Jun 2014 13:52:13 +0000 (13:52 +0000)]
- added functionality to query a BioCASE provider for the original record which is then opened in another editor
Patric Plitzner [Mon, 2 Jun 2014 09:43:18 +0000 (09:43 +0000)]
- moved query class variable to super class DataImportEditorInput
Cherian Mathew [Fri, 30 May 2014 09:51:21 +0000 (09:51 +0000)]
added sourcepath to all cdm libs
edit-jenkins [Fri, 30 May 2014 09:12:53 +0000 (09:12 +0000)]
Updated version in config files to 3.3.6-SNAPSHOT
edit-jenkins [Fri, 30 May 2014 09:02:28 +0000 (09:02 +0000)]
Updated version in config files to 3.3.5
Katja Luther [Thu, 29 May 2014 20:47:52 +0000 (20:47 +0000)]
delete in taxon bulk editor
Patric Plitzner [Wed, 28 May 2014 14:10:39 +0000 (14:10 +0000)]
- adapted to cdmlib-ext changes
Patric Plitzner [Wed, 28 May 2014 14:10:19 +0000 (14:10 +0000)]
- changed date format to mm-yyyy
Patric Plitzner [Wed, 28 May 2014 13:45:48 +0000 (13:45 +0000)]
- checked in previously deleted eclipse jar files (see #4227)
Katja Luther [Wed, 28 May 2014 12:31:41 +0000 (12:31 +0000)]
move the taxon bulk editor entry to names group in menu
Katja Luther [Wed, 28 May 2014 12:14:18 +0000 (12:14 +0000)]
catch NPE #4228
Patric Plitzner [Wed, 28 May 2014 10:57:23 +0000 (10:57 +0000)]
- removed test code
Patric Plitzner [Wed, 28 May 2014 09:44:30 +0000 (09:44 +0000)]
- removed eclipse jars from svn:ignore because of too much trouble (see #4227)
Patric Plitzner [Wed, 28 May 2014 09:40:24 +0000 (09:40 +0000)]
- adapted to interface changes in cdmlib
Patric Plitzner [Wed, 28 May 2014 09:29:41 +0000 (09:29 +0000)]
- checked in previously deleted .classpath file (see #4227)
Patric Plitzner [Wed, 28 May 2014 09:28:22 +0000 (09:28 +0000)]
- removed .classpath from svn:ignore because of too much trouble (see #4227)
Katja Luther [Wed, 28 May 2014 09:27:35 +0000 (09:27 +0000)]
Patric Plitzner [Wed, 28 May 2014 08:57:39 +0000 (08:57 +0000)]
- added new DataImportEditor for GbifResponses
- allows querying for original record via context menu
Patric Plitzner [Tue, 27 May 2014 08:24:41 +0000 (08:24 +0000)]
- fixed refresh problem for SpecimenImportEditor