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eu.etaxonomy.taxeditor.cdmlib/lib/antlr-2.7.7.jar -text
eu.etaxonomy.taxeditor.cdmlib/lib/aopalliance-1.0.jar -text
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eu.etaxonomy.taxeditor.cdmlib/lib/aspectjrt-1.7.1.jar -text
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eu.etaxonomy.taxeditor.cdmlib/lib/aspectjweaver-1.7.1.jar -text
eu.etaxonomy.taxeditor.cdmlib/lib/avro-1.6.3.jar -text
eu.etaxonomy.taxeditor.cdmlib/lib/batik-anim-1.7.jar -text
eu.etaxonomy.taxeditor.cdmlib/lib/stax-1.2.0.jar -text
eu.etaxonomy.taxeditor.cdmlib/lib/stax-api-1.0.1.jar -text
eu.etaxonomy.taxeditor.cdmlib/lib/swagger-annotations-1.3.5.jar -text
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+eu.etaxonomy.taxeditor.cdmlib/src/main/java/eu/etaxonomy/taxeditor/remoting/source/CdmServerInfo.java -text
+eu.etaxonomy.taxeditor.cdmlib/src/main/java/eu/etaxonomy/taxeditor/remoting/source/ICdmRemoteSource.java -text
+eu.etaxonomy.taxeditor.cdmlib/src/main/java/eu/etaxonomy/taxeditor/service/CachedCommonServiceImpl.java -text
+eu.etaxonomy.taxeditor.cdmlib/src/main/java/eu/etaxonomy/taxeditor/service/CdmAuthenticatedHttpInvokerRequestExecutor.java -text
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eu.etaxonomy.taxeditor.cdmlib/src/main/java/org/hibernate/collection/internal/AbstractPersistentCollection.java -text
eu.etaxonomy.taxeditor.cdmlib/src/main/java/org/hibernate/proxy/AbstractLazyInitializer.java -text
+eu.etaxonomy.taxeditor.cdmlib/src/main/resources/cdmlib-ehcache.xml -text
+eu.etaxonomy.taxeditor.cdmlib/src/main/resources/etc/jetty/.svnignore -text
+eu.etaxonomy.taxeditor.cdmlib/src/main/resources/etc/jetty/cdmlib-remote-webapp.war -text
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eu.etaxonomy.taxeditor.cdmlib/src/main/resources/eu/etaxonomy/cdm/httpInvokerServiceClients.xml -text
eu.etaxonomy.taxeditor.cdmlib/src/main/resources/eu/etaxonomy/cdm/localApplicationContext.xml -text
+eu.etaxonomy.taxeditor.cdmlib/src/main/resources/eu/etaxonomy/cdm/mappings/hibernate.cfg.xml -text
eu.etaxonomy.taxeditor.cdmlib/src/main/resources/eu/etaxonomy/cdm/remotingApplicationContext.xml -text
eu.etaxonomy.taxeditor.cdmlib/src/main/resources/eu/etaxonomy/cdm/remoting_persistence_security.xml -text
eu.etaxonomy.taxeditor.cdmlib/src/main/resources/eu/etaxonomy/cdm/remoting_services_security.xml -text
-eu.etaxonomy.taxeditor.cdmlib/src/test/resources/eu/etaxonomy/cdm/datasources/cdm.datasources.xml -text
+eu.etaxonomy.taxeditor.cdmlib/src/main/resources/log4j.properties -text
eu.etaxonomy.taxeditor.editor/.classpath -text
eu.etaxonomy.taxeditor.editor/.project -text
eu.etaxonomy.taxeditor.editor/META-INF/MANIFEST.MF -text
eu.etaxonomy.taxeditor.editor/plugin.xml -text
eu.etaxonomy.taxeditor.editor/pom.xml -text
eu.etaxonomy.taxeditor.editor/src/main/java/eu/etaxonomy/taxeditor/editor/CdmDataTransfer.java -text
+eu.etaxonomy.taxeditor.editor/src/main/java/eu/etaxonomy/taxeditor/editor/CdmEntitySessionInput.java -text
eu.etaxonomy.taxeditor.editor/src/main/java/eu/etaxonomy/taxeditor/editor/ChooseFromMultipleTaxonNodesDialog.java -text
eu.etaxonomy.taxeditor.editor/src/main/java/eu/etaxonomy/taxeditor/editor/EditorCdmViewer.java -text
eu.etaxonomy.taxeditor.editor/src/main/java/eu/etaxonomy/taxeditor/editor/EditorStateManager.java -text
eu.etaxonomy.taxeditor.store/src/main/java/eu/etaxonomy/taxeditor/featuretree/SelectFeatureTreeWizard.java -text
eu.etaxonomy.taxeditor.store/src/main/java/eu/etaxonomy/taxeditor/featuretree/SelectFeatureTreeWizardPage.java -text
eu.etaxonomy.taxeditor.store/src/main/java/eu/etaxonomy/taxeditor/handler/OpenDistributionEditorWizardHandler.java -text
+<<<<<<< HEAD
+eu.etaxonomy.taxeditor.store/src/main/java/eu/etaxonomy/taxeditor/handler/OpenInspectSessionsHandler.java -text
+=======
eu.etaxonomy.taxeditor.store/src/main/java/eu/etaxonomy/taxeditor/handler/OpenHandler.java -text
+>>>>>>> 02176688eaa23a31ff5b71c317cb5ee685483aa4
eu.etaxonomy.taxeditor.store/src/main/java/eu/etaxonomy/taxeditor/handler/OpenPasswordWizzardHandler.java -text
eu.etaxonomy.taxeditor.store/src/main/java/eu/etaxonomy/taxeditor/handler/ShowLoginWindowHandler.java -text
+eu.etaxonomy.taxeditor.store/src/main/java/eu/etaxonomy/taxeditor/handler/ShowRemotingLoginWindowHandler.java -text
eu.etaxonomy.taxeditor.store/src/main/java/eu/etaxonomy/taxeditor/identificationkey/AbstractIdentificaitonKeyWizard.java -text
eu.etaxonomy.taxeditor.store/src/main/java/eu/etaxonomy/taxeditor/io/AbstractIOManager.java -text
eu.etaxonomy.taxeditor.store/src/main/java/eu/etaxonomy/taxeditor/io/ExportManager.java -text
eu.etaxonomy.taxeditor.store/src/main/java/eu/etaxonomy/taxeditor/operation/AbstractPostOperation.java -text
eu.etaxonomy.taxeditor.store/src/main/java/eu/etaxonomy/taxeditor/operation/AbstractPostTaxonOperation.java -text
eu.etaxonomy.taxeditor.store/src/main/java/eu/etaxonomy/taxeditor/operation/IPostOperationEnabled.java -text
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eu.etaxonomy.taxeditor.store/src/main/java/eu/etaxonomy/taxeditor/parser/ParseHandler.java -text
eu.etaxonomy.taxeditor.store/src/main/java/eu/etaxonomy/taxeditor/preference/CdmPreferences.java -text
eu.etaxonomy.taxeditor.store/src/main/java/eu/etaxonomy/taxeditor/preference/CdmStorePropertyTester.java -text
eu.etaxonomy.taxeditor.store/src/main/java/eu/etaxonomy/taxeditor/ui/combo/VocabularyComboElement.java -text
eu.etaxonomy.taxeditor.store/src/main/java/eu/etaxonomy/taxeditor/ui/dialog/DefaultLanguageDialog.java -text
eu.etaxonomy.taxeditor.store/src/main/java/eu/etaxonomy/taxeditor/ui/dialog/LoginDialog.java -text
+eu.etaxonomy.taxeditor.store/src/main/java/eu/etaxonomy/taxeditor/ui/dialog/RemotingLoginDialog.java -text
eu.etaxonomy.taxeditor.store/src/main/java/eu/etaxonomy/taxeditor/ui/dialog/UriDialog.java -text
eu.etaxonomy.taxeditor.store/src/main/java/eu/etaxonomy/taxeditor/ui/dialog/deleteConfigurator/DeleteConfiguratorComposite.java -text
eu.etaxonomy.taxeditor.store/src/main/java/eu/etaxonomy/taxeditor/ui/dialog/deleteConfigurator/DeleteConfiguratorDialog.java -text
eu.etaxonomy.taxeditor.store/src/main/java/eu/etaxonomy/taxeditor/view/detail/DetailsViewPart.java -text
eu.etaxonomy.taxeditor.store/src/main/java/eu/etaxonomy/taxeditor/view/detail/DetailsViewer.java -text
eu.etaxonomy.taxeditor.store/src/main/java/eu/etaxonomy/taxeditor/view/reporting/ReportingViewPart.java -text
+eu.etaxonomy.taxeditor.store/src/main/java/eu/etaxonomy/taxeditor/view/sessions/InspectSessionsDialog.java -text
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eu.etaxonomy.taxeditor.store/src/main/java/eu/etaxonomy/taxeditor/view/specimenSearch/SpecimenProviderSelectionComposite.java -text
eu.etaxonomy.taxeditor.store/src/main/java/eu/etaxonomy/taxeditor/view/specimenSearch/SpecimenProviderSelectionController.java -text
eu.etaxonomy.taxeditor.store/src/main/java/eu/etaxonomy/taxeditor/view/specimenSearch/SpecimenSearchComposite.java -text
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eu.etaxonomy.taxeditor.test/build.properties -text
eu.etaxonomy.taxeditor.test/ide/eclipse/EDITor[!!-~]Tests.launch -text
+eu.etaxonomy.taxeditor.test/lib/byte-buddy-0.5.1.jar -text
eu.etaxonomy.taxeditor.test/pom.xml -text
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eu.etaxonomy.taxeditor.test/src/test/java/eu/etaxonomy/taxeditor/application/menu/general/NewMenuTest.java -text
+eu.etaxonomy.taxeditor.test/src/test/java/eu/etaxonomy/taxeditor/httpinvoker/BaseRemotingTest.java -text
+eu.etaxonomy.taxeditor.test/src/test/java/eu/etaxonomy/taxeditor/httpinvoker/CDMServer.java -text
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+eu.etaxonomy.taxeditor.test/src/test/java/eu/etaxonomy/taxeditor/lazyloading/AbstractLazyInitializerTest.java -text
+eu.etaxonomy.taxeditor.test/src/test/java/eu/etaxonomy/taxeditor/lazyloading/CdmEntityCacherTest.java -text
+eu.etaxonomy.taxeditor.test/src/test/java/eu/etaxonomy/taxeditor/lazyloading/CdmServiceCacherTest.java -text
+eu.etaxonomy.taxeditor.test/src/test/java/eu/etaxonomy/taxeditor/lazyloading/RemoteLazyLoadingTest.java -text
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eu.etaxonomy.taxeditor.test/src/test/java/eu/etaxonomy/taxeditor/navigation/navigator/contextmenu/ClassificationTest.java -text
eu.etaxonomy.taxeditor.test/src/test/java/eu/etaxonomy/taxeditor/newWizard/NewTaxonWizardTest.java -text
+eu.etaxonomy.taxeditor.test/src/test/java/eu/etaxonomy/taxeditor/operations/OperationTestBase.java -text
+eu.etaxonomy.taxeditor.test/src/test/java/eu/etaxonomy/taxeditor/service/ITestService.java -text
+eu.etaxonomy.taxeditor.test/src/test/java/eu/etaxonomy/taxeditor/service/ServiceInterceptorTest.java -text
+eu.etaxonomy.taxeditor.test/src/test/java/eu/etaxonomy/taxeditor/service/ServiceRebasingTest.java -text
+eu.etaxonomy.taxeditor.test/src/test/java/eu/etaxonomy/taxeditor/service/TargetTestService.java -text
+eu.etaxonomy.taxeditor.test/src/test/java/eu/etaxonomy/taxeditor/service/TestService.java -text
+eu.etaxonomy.taxeditor.test/src/test/java/eu/etaxonomy/taxeditor/session/CdmEntitySessionManagerTest.java -text
+eu.etaxonomy.taxeditor.test/src/test/java/eu/etaxonomy/taxeditor/session/MockSessionOwner.java -text
eu.etaxonomy.taxeditor.test/src/test/java/eu/etaxonomy/taxeditor/test/AbstractEditorTest.java -text
eu.etaxonomy.taxeditor.test/src/test/java/eu/etaxonomy/taxeditor/test/ContextMenuHelper.java -text
eu.etaxonomy.taxeditor.test/src/test/java/eu/etaxonomy/taxeditor/test/SwtBotUtils.java -text
+eu.etaxonomy.taxeditor.test/src/test/java/eu/etaxonomy/taxeditor/ui/dialogs/CdmServerInfoTest.java -text
eu.etaxonomy.taxeditor.test/src/test/java/eu/etaxonomy/taxeditor/ui/dialogs/LoginDialogTest.java -text
eu.etaxonomy.taxeditor.test/src/test/java/eu/etaxonomy/taxeditor/ui/selection/AbstractSelectionElementTest.java -text
eu.etaxonomy.taxeditor.test/src/test/java/eu/etaxonomy/taxeditor/ui/selection/ClassificationSelectionElementTest.java -text
src/site/resources/css/site.css -text
src/site/resources/images/taxeditor_transformed.png -text
src/site/site.xml -text
+
+# The following files will be ignored when merging another
+# branch into this branch in case of merge conflict and
+# if the 'ours' merge driver is configured.
+# WARNING : This merge driver should NOT be set in development
+# environments. It is supposed to be used only in CI
+# environments.
+# The driver can be configured by executing,
+# git config --local merge.ours.driver true
+**/pom.xml merge=ours
+**/MANIFEST.MF merge=ours
+**/feature.xml merge=ours
+eu.etaxonomy.taxeditor.cdmlib/.classpath merge=ours
+eu.etaxonomy.taxeditor.cdmlib/build.properties merge=ours
+eu.etaxonomy.taxeditor/eu.etaxonomy.taxeditor.product merge=ours
+eu.etaxonomy.taxeditor/eu.etaxonomy.taxeditor.product.with.jre merge=ours
\ No newline at end of file
/.project
+eu.etaxonomy.taxeditor.cdmlib/src/main/resources/etc/jetty/*
eu.etaxonomy.taxeditor.application/.settings
eu.etaxonomy.taxeditor.application/target
eu.etaxonomy.taxeditor.bulkeditor/.settings
eu.etaxonomy.taxeditor.cdmlib/cdmlib-*.jar
eu.etaxonomy.taxeditor.cdmlib/cdmlib-*.zip
eu.etaxonomy.taxeditor.cdmlib/dist
+eu.etaxonomy.taxeditor.cdmlib/lib/cdm-server*
eu.etaxonomy.taxeditor.cdmlib/lib/cdmlib*
eu.etaxonomy.taxeditor.cdmlib/lib/org.eclipse.equinox.servletbridge.extensionbundle-1.2.0.v20100503.jar
eu.etaxonomy.taxeditor.cdmlib/lib/org.eclipse.equinox.transforms.hook-1.0.300.v20100719.jar
<classpathentry kind="con" path="org.eclipse.jdt.launching.JRE_CONTAINER/org.eclipse.jdt.internal.debug.ui.launcher.StandardVMType/JavaSE-1.6"/>
<classpathentry kind="con" path="org.eclipse.pde.core.requiredPlugins"/>
<classpathentry including="**/*.java" kind="src" path="src/main/java"/>
- <classpathentry kind="src" path="src/main/resources"/>
+ <classpathentry kind="src" path="src/test/java"/>
<classpathentry kind="output" path="target/classes"/>
</classpath>
Bundle-ManifestVersion: 2
Bundle-Name: Application
Bundle-SymbolicName: eu.etaxonomy.taxeditor.application;singleton:=true
-Bundle-Version: 3.8.1
+Bundle-Version: 3.12.0.qualifier
Bundle-Activator: eu.etaxonomy.taxeditor.TaxonomicEditorPlugin
Bundle-Vendor: EDIT
Bundle-Localization: OSGI-INF/l10n/plugin
Export-Package: eu.etaxonomy.taxeditor
Bundle-ActivationPolicy: lazy
Bundle-RequiredExecutionEnvironment: JavaSE-1.6
-Import-Package: org.apache.log4j,
+Import-Package: eu.etaxonomy.cdm.database,
+ org.apache.log4j,
org.eclipse.equinox.app,
org.eclipse.equinox.p2.repository.metadata,
org.osgi.framework,
commandId="org.eclipse.ui.file.import"
label="%command.label.3"
style="push">
+ <visibleWhen
+ checkEnabled="true">
+ <reference
+ definitionId="isCdmStoreConnected">
+ </reference>
+ </visibleWhen>
</command>
<command
commandId="org.eclipse.ui.file.export"
label="%command.label.4"
style="push">
+ <visibleWhen
+ checkEnabled="true">
+ <reference
+ definitionId="isCdmStoreConnected">
+ </reference>
+ </visibleWhen>
</command>
<separator
name="eu.etaxonomy.taxeditor.application.filemenu.io"
<parent>
<groupId>eu.etaxonomy</groupId>
<artifactId>taxeditor-parent</artifactId>
- <version>3.8.1</version>
+ <version>3.12.0-SNAPSHOT</version>
</parent>
<modelVersion>4.0.0</modelVersion>
import eu.etaxonomy.taxeditor.store.CdmStore;
import eu.etaxonomy.taxeditor.ui.dialog.LoginDialog;
import eu.etaxonomy.taxeditor.update.P2Util;
+import eu.etaxonomy.taxeditor.util.ApplicationUtil;
/**
* <p>ApplicationWorkbenchWindowAdvisor class.</p>
configurer.setShowCoolBar(true);
configurer.setShowStatusLine(true);
configurer.setShowPerspectiveBar(true);
- configurer.setTitle("EDIT Taxonomic Editor " + ApplicationUtil.getVersion());
+ configurer.setTitle(ApplicationUtil.getTitle());
configurer.setShowProgressIndicator(true);
CdmDataSourceRepository.createDefaultH2DataSource();
import org.eclipse.core.runtime.IProgressMonitor;
import org.eclipse.core.runtime.IStatus;
-import org.eclipse.core.runtime.NullProgressMonitor;
import org.eclipse.core.runtime.OperationCanceledException;
import org.eclipse.core.runtime.Status;
import org.eclipse.core.runtime.jobs.IJobChangeEvent;
import org.eclipse.equinox.internal.p2.ui.ProvUI;
import org.eclipse.equinox.internal.p2.ui.model.ElementUtils;
import org.eclipse.equinox.internal.p2.ui.model.MetadataRepositoryElement;
-import org.eclipse.equinox.p2.repository.IRepository;
-import org.eclipse.equinox.p2.repository.IRepositoryManager;
-import org.eclipse.equinox.p2.repository.metadata.IMetadataRepository;
-import org.eclipse.equinox.p2.repository.metadata.IMetadataRepositoryManager;
import org.eclipse.equinox.p2.core.IProvisioningAgent;
import org.eclipse.equinox.p2.core.ProvisionException;
import org.eclipse.equinox.p2.operations.ProvisioningJob;
import org.eclipse.equinox.p2.operations.ProvisioningSession;
-import org.eclipse.equinox.p2.operations.RepositoryTracker;
import org.eclipse.equinox.p2.operations.Update;
import org.eclipse.equinox.p2.operations.UpdateOperation;
+import org.eclipse.equinox.p2.repository.IRepository;
+import org.eclipse.equinox.p2.repository.IRepositoryManager;
+import org.eclipse.equinox.p2.repository.metadata.IMetadataRepositoryManager;
import org.eclipse.equinox.p2.ui.ProvisioningUI;
import org.eclipse.swt.widgets.Display;
import org.eclipse.ui.PlatformUI;
import org.osgi.framework.BundleContext;
import org.osgi.framework.ServiceReference;
-import eu.etaxonomy.taxeditor.ApplicationUtil;
import eu.etaxonomy.taxeditor.TaxonomicEditorPlugin;
import eu.etaxonomy.taxeditor.model.MessagingUtils;
import eu.etaxonomy.taxeditor.preference.PreferencesUtil;
+import eu.etaxonomy.taxeditor.util.ApplicationUtil;
/**
* This class is a utility class for updating the editor from a p2 update site,
*
*/
public static void checkForUpdates() {
- // the main job which performs the update
+
Job updateJob = new Job("Update Job") {
@Override
public IStatus run(IProgressMonitor monitor) {
*/
private static IStatus doCheckForUpdates(IProgressMonitor monitor) {
+ // force refresh all the caches before
+ IMetadataRepositoryManager metaManager = ProvUI.getMetadataRepositoryManager(ProvisioningUI.getDefaultUI().getSession());
+ URI[] repos = metaManager.getKnownRepositories(IRepositoryManager.REPOSITORIES_ALL);
+ for(URI repo : repos) {
+ try {
+ metaManager.refreshRepository(repo, monitor);
+ } catch (ProvisionException pe) {
+ IStatus errorStatus = new Status(IStatus.ERROR, TaxonomicEditorPlugin.PLUGIN_ID,
+ "Error occured while reloading cache.", pe);
+
+ } catch (OperationCanceledException oce) {
+ IStatus errorStatus = new Status(IStatus.ERROR, TaxonomicEditorPlugin.PLUGIN_ID,
+ "Error occured while reloading cache.", oce);
+ }
+ }
BundleContext bundleContext = TaxonomicEditorPlugin.getContext();
ServiceReference reference = bundleContext.getServiceReference(IProvisioningAgent.SERVICE_NAME);
if (reference == null) {
+++ /dev/null
-### ************ APPENDER ***********************************###\r
-\r
-### direct log messages to stdout ###\r
-log4j.appender.stdout=org.apache.log4j.ConsoleAppender\r
-log4j.appender.stdout.Target=System.out\r
-log4j.appender.stdout.layout=org.apache.log4j.PatternLayout\r
-log4j.appender.stdout.layout.ConversionPattern=%d{ABSOLUTE} %5p %c{1}:%L - %m%n\r
-\r
-### direct messages to file hibernate.log ###\r
-log4j.appender.file=org.apache.log4j.FileAppender\r
-log4j.appender.file.File=taxeditor.log\r
-log4j.appender.file.layout=org.apache.log4j.PatternLayout\r
-log4j.appender.file.layout.ConversionPattern=%d{ABSOLUTE} %5p %c{1}:%L - %m%n\r
-\r
-### ************* LOG LEVELS *********************************###\r
-\r
-### set log levels - for more verbose logging change 'info' to 'debug' ###\r
-### levels: error, warn, debug, info\r
-log4j.rootLogger=INFO, stdout\r
-\r
-### set directory-specific levels below\r
-\r
-### basic level for editor directory\r
-log4j.logger.eu.etaxonomy.taxeditor.editor = WARN, stdout \r
-\r
-log4j.logger.eu.etaxonomy.taxeditor.editor.handler = DEBUG, stdout\r
-\r
-### log level for conversation handler\r
-#log4j.logger.eu.etaxonomy.cdm.api.application = DEBUG, stdout\r
-<?xml version="1.0" encoding="UTF-8"?>\r
-<classpath>\r
- <classpathentry kind="con" path="org.eclipse.jdt.launching.JRE_CONTAINER/org.eclipse.jdt.internal.debug.ui.launcher.StandardVMType/JavaSE-1.6"/>\r
- <classpathentry kind="con" path="org.eclipse.pde.core.requiredPlugins"/>\r
- <classpathentry including="**/*.java" kind="src" path="src/main/java"/>\r
- <classpathentry including="**/*.java" kind="src" path="src/test/java"/>\r
- <classpathentry kind="output" path="target/classes"/>\r
-</classpath>\r
+<?xml version="1.0" encoding="UTF-8"?>
+<classpath>
+ <classpathentry kind="con" path="org.eclipse.jdt.launching.JRE_CONTAINER/org.eclipse.jdt.internal.debug.ui.launcher.StandardVMType/JavaSE-1.6"/>
+ <classpathentry kind="con" path="org.eclipse.pde.core.requiredPlugins"/>
+ <classpathentry including="**/*.java" kind="src" path="src/main/java"/>
+ <classpathentry including="**/*.java" kind="src" path="src/test/java"/>
+ <classpathentry kind="output" path="target/classes"/>
+</classpath>
Bundle-ManifestVersion: 2
Bundle-Name: Bulkeditor Bundle
Bundle-SymbolicName: eu.etaxonomy.taxeditor.bulkeditor;singleton:=true
-Bundle-Version: 3.8.1
+Bundle-Version: 3.12.0.qualifier
Bundle-Activator: eu.etaxonomy.taxeditor.bulkeditor.internal.TaxeditorBulkeditorPlugin
Bundle-Vendor: EDIT
Export-Package: eu.etaxonomy.taxeditor.annotatedlineeditor,
eu.etaxonomy.taxeditor.cdmlib
Bundle-RequiredExecutionEnvironment: JavaSE-1.6
Bundle-ActivationPolicy: lazy
-Import-Package: org.eclipse.core.runtime,
+Import-Package: eu.etaxonomy.taxeditor.editor,
+ org.eclipse.core.runtime,
org.eclipse.equinox.app,
org.eclipse.jface.text,
org.eclipse.jface.text.presentation,
<parent>
<groupId>eu.etaxonomy</groupId>
<artifactId>taxeditor-parent</artifactId>
- <version>3.8.1</version>
+ <version>3.12.0-SNAPSHOT</version>
</parent>
<modelVersion>4.0.0</modelVersion>
if (annotation instanceof IEntityContainer<?>) {
IEntityContainer<?> container = (IEntityContainer<?>) annotation;
if (container.isMarkedAsNew() || container.isDirty()) {
- persistenceService.save(container.getEntity()); // save
+ Object entity = persistenceService.save(container.getEntity()); // save
+ container.setEntity(entity);
container.setDirty(false);
container.markAsNew(false);
}
// $Id$
/**
-* Copyright (C) 2007 EDIT
-* European Distributed Institute of Taxonomy
-* http://www.e-taxonomy.eu
-*
-* The contents of this file are subject to the Mozilla Public License Version 1.1
-* See LICENSE.TXT at the top of this package for the full license terms.
-*/
+ * Copyright (C) 2007 EDIT
+ * European Distributed Institute of Taxonomy
+ * http://www.e-taxonomy.eu
+ *
+ * The contents of this file are subject to the Mozilla Public License Version 1.1
+ * See LICENSE.TXT at the top of this package for the full license terms.
+ */
package eu.etaxonomy.taxeditor.annotatedlineeditor;
import java.util.Iterator;
import eu.etaxonomy.cdm.hibernate.HibernateProxyHelper;
import eu.etaxonomy.cdm.model.common.CdmBase;
import eu.etaxonomy.cdm.persistence.hibernate.CdmDataChangeMap;
+import eu.etaxonomy.taxeditor.bulkeditor.input.AbstractBulkEditorInput;
import eu.etaxonomy.taxeditor.operation.IPostOperationEnabled;
import eu.etaxonomy.taxeditor.store.CdmStore;
*/
public class AnnotatedLineEditor extends TextEditor implements IConversationEnabled, IPostOperationEnabled {
- protected ConversationHolder conversation;
-
- private IEntityPersistenceService persistenceService;
- protected ILineDisplayStrategy lineDisplayStrategy;
-
-
- /**
- * <p>Constructor for AnnotatedLineEditor.</p>
- *
- * @param conversation a {@link eu.etaxonomy.cdm.api.conversation.ConversationHolder} object.
- */
- public AnnotatedLineEditor(ConversationHolder conversation) {
- this.conversation = conversation;
- }
-
- /* (non-Javadoc)
- * @see org.eclipse.ui.editors.text.TextEditor#doSetInput(org.eclipse.ui.IEditorInput)
- */
- /** {@inheritDoc} */
- @Override
- protected void doSetInput(IEditorInput input) throws CoreException {
-
- AnnotatedLineDocumentProvider provider = new AnnotatedLineDocumentProvider(input);
-
- provider.setLineDisplayStrategy(lineDisplayStrategy, input);
- setDocumentProvider(provider);
-
- super.doSetInput(input);
- }
-
- /**
- * <p>Setter for the field <code>persistenceService</code>.</p>
- *
- * @param persistenceService a {@link eu.etaxonomy.taxeditor.annotatedlineeditor.IEntityPersistenceService} object.
- */
- protected void setPersistenceService(
- IEntityPersistenceService persistenceService) {
- this.persistenceService = persistenceService;
- }
-
- /**
- * <p>Getter for the field <code>persistenceService</code>.</p>
- *
- * @return a {@link eu.etaxonomy.taxeditor.annotatedlineeditor.IEntityPersistenceService} object.
- */
- protected IEntityPersistenceService getPersistenceService() {
- return persistenceService;
- }
-
- /**
- * <p>Setter for the field <code>lineDisplayStrategy</code>.</p>
- *
- * @param lineDisplayStrategy a {@link eu.etaxonomy.taxeditor.annotatedlineeditor.ILineDisplayStrategy} object.
- */
- protected void setLineDisplayStrategy(
- ILineDisplayStrategy lineDisplayStrategy) {
- this.lineDisplayStrategy = lineDisplayStrategy;
- }
-
- /** {@inheritDoc} */
- @Override
- protected ISourceViewer createSourceViewer(Composite parent,
- IVerticalRuler ruler, int styles) {
-
- fAnnotationAccess= getAnnotationAccess();
- fOverviewRuler= createOverviewRuler(getSharedColors());
- LineSelectionViewer viewer = new LineSelectionViewer(parent, ruler, getOverviewRuler(),
- isOverviewRulerVisible(), styles);
-// isOverviewRulerVisible(), styles | SWT.WRAP);
- getSourceViewerDecorationSupport(viewer);
-
- return viewer;
- }
-
- /**
- * Create an annotated line with an "empty" entity, i.e. using the editor
- * input's default entity type and a zero-length title cache.
- *
- * @return a {@link eu.etaxonomy.taxeditor.annotatedlineeditor.LineAnnotation} object.
- */
- public LineAnnotation createAnnotatedLineNewObject() {
-
- // Create new object
-
- AnnotatedLineDocumentProvider documentProvider = (AnnotatedLineDocumentProvider) getDocumentProvider();
- IEntityCreator entityCreator = documentProvider.getEntityCreator(getEditorInput());
- Object entity = entityCreator.createEntity(null);
-
- LineAnnotation annotation = createAnnotatedLine(entity);
- if (annotation != null) {
- annotation.markAsNew(true);
- }
- return annotation;
- }
-
- /**
- * Create an annotated line, first creating an entity of type "key" - this key
- * must be recognized by the editor's entity creator.
- *
- * @param key a {@link java.lang.Object} object.
- * @param titleCache a {@link java.lang.String} object.
- * @return a {@link eu.etaxonomy.taxeditor.annotatedlineeditor.LineAnnotation} object.
- */
- public LineAnnotation createAnnotatedLineNewObject(Object key, String titleCache) {
-
-
-
- // Create new object
- Object entity = ((AnnotatedLineDocumentProvider) getDocumentProvider()).
- getEntityCreator(getEditorInput()).createEntity(key, titleCache);
- // checks if the creator also saves the entity (in a different conversation), in which case
- // we need to bind back this editors conversation
- // we also need to reload the entity because the conversation used to
- // to create / save the entity may have been closed
- if(entity != null && ((AnnotatedLineDocumentProvider) getDocumentProvider()).getEntityCreator(getEditorInput()).savesEntity()) {
- getConversationHolder().bind();
- Object object = CdmStore.getService(IOccurrenceService.class).load(((CdmBase)entity).getUuid());
- entity = HibernateProxyHelper.deproxy(object);
- }
-
- if(entity == null) {
- return null;
- }
- LineAnnotation annotation = createAnnotatedLine(entity);
- if (annotation != null) {
- annotation.markAsNew(true);
- }
-
- return annotation;
-
- }
-
- @Override
- public boolean isDirty() {
- return super.isDirty();
- }
-
- /**
- * Creates an annotated line at the end of the document. The annotation contains the entity.
- *
- * @param entity a {@link java.lang.Object} object.
- * @return a {@link eu.etaxonomy.taxeditor.annotatedlineeditor.LineAnnotation} object.
- */
- public LineAnnotation createAnnotatedLine(Object entity) {
-
- IEditorInput input = getEditorInput();
- AnnotatedLineDocumentProvider provider = (AnnotatedLineDocumentProvider) getDocumentProvider();
-
- LineAnnotation annotation = null;
- try {
- annotation = provider.createAnnotatedLine(input, entity);
-
- // Jump to new line
- IAnnotationModel model = provider.getAnnotationModel(input);
- if(model != null){
- int start= model.getPosition(annotation).getOffset();
- selectAndReveal(start, 0);
- }
-
- } catch (BadLocationException e) {
- // TODO Auto-generated catch block
- e.printStackTrace();
- }
- return annotation;
- }
-
- /**
- * <p>removeAnnotatedLine</p>
- *
- * @param lineno a int.
- */
- public void removeAnnotatedLine(int lineno) {
- ((AnnotatedLineDocumentProvider) getDocumentProvider()).removeAnnotatedLine(lineno);
- }
-
- /**
- * <p>removeAnnotatedLine</p>
- *
- * @param annotation a {@link eu.etaxonomy.taxeditor.annotatedlineeditor.LineAnnotation} object.
- */
- public void removeAnnotatedLine(LineAnnotation annotation) {
- ((AnnotatedLineDocumentProvider) getDocumentProvider()).removeAnnotatedLine(annotation);
- }
-
- /* (non-Javadoc)
- * @see org.eclipse.ui.texteditor.AbstractTextEditor#doSave(org.eclipse.core.runtime.IProgressMonitor)
- */
- /** {@inheritDoc} */
- @Override
- public void doSave(IProgressMonitor progressMonitor) {
- if (getConversationHolder() != null) {
- if( ! getConversationHolder().isBound()){
- getConversationHolder().bind();
- }
- super.doSave(progressMonitor);
- getConversationHolder().commit(true);
- } else {
- super.doSave(progressMonitor);
- }
- firePropertyChange(PROP_DIRTY);
- }
-
- /* (non-Javadoc)
- * @see org.eclipse.ui.texteditor.AbstractTextEditor#setFocus()
- */
- /** {@inheritDoc} */
- @Override
- public void setFocus() {
- super.setFocus();
- if (getConversationHolder() != null) {
- getConversationHolder().bind();
- }
- PlatformUI.getWorkbench().getActiveWorkbenchWindow().getShell().setFocus();
- // TODO pass focus to underlying widgets
- }
-
- /* (non-Javadoc)
- * @see eu.etaxonomy.cdm.api.conversation.IConversationEnabled#getConversationHolder()
- */
- /**
- * <p>getConversationHolder</p>
- *
- * @return a {@link eu.etaxonomy.cdm.api.conversation.ConversationHolder} object.
- */
- @Override
+ protected ConversationHolder conversation;
+
+ private IEntityPersistenceService persistenceService;
+ protected ILineDisplayStrategy lineDisplayStrategy;
+
+
+ /**
+ * <p>Constructor for AnnotatedLineEditor.</p>
+ *
+ * @param conversation a {@link eu.etaxonomy.cdm.api.conversation.ConversationHolder} object.
+ */
+ public AnnotatedLineEditor(ConversationHolder conversation) {
+ this.conversation = conversation;
+ }
+
+ /* (non-Javadoc)
+ * @see org.eclipse.ui.editors.text.TextEditor#doSetInput(org.eclipse.ui.IEditorInput)
+ */
+ /** {@inheritDoc} */
+ @Override
+ protected void doSetInput(IEditorInput input) throws CoreException {
+
+ AnnotatedLineDocumentProvider provider = new AnnotatedLineDocumentProvider(input);
+
+ provider.setLineDisplayStrategy(lineDisplayStrategy, input);
+ setDocumentProvider(provider);
+
+ super.doSetInput(input);
+ }
+
+ /**
+ * <p>Setter for the field <code>persistenceService</code>.</p>
+ *
+ * @param persistenceService a {@link eu.etaxonomy.taxeditor.annotatedlineeditor.IEntityPersistenceService} object.
+ */
+ protected void setPersistenceService(
+ IEntityPersistenceService persistenceService) {
+ this.persistenceService = persistenceService;
+ }
+
+ /**
+ * <p>Getter for the field <code>persistenceService</code>.</p>
+ *
+ * @return a {@link eu.etaxonomy.taxeditor.annotatedlineeditor.IEntityPersistenceService} object.
+ */
+ protected IEntityPersistenceService getPersistenceService() {
+ return persistenceService;
+ }
+
+ /**
+ * <p>Setter for the field <code>lineDisplayStrategy</code>.</p>
+ *
+ * @param lineDisplayStrategy a {@link eu.etaxonomy.taxeditor.annotatedlineeditor.ILineDisplayStrategy} object.
+ */
+ protected void setLineDisplayStrategy(
+ ILineDisplayStrategy lineDisplayStrategy) {
+ this.lineDisplayStrategy = lineDisplayStrategy;
+ }
+
+ /** {@inheritDoc} */
+ @Override
+ protected ISourceViewer createSourceViewer(Composite parent,
+ IVerticalRuler ruler, int styles) {
+
+ fAnnotationAccess= getAnnotationAccess();
+ fOverviewRuler= createOverviewRuler(getSharedColors());
+ LineSelectionViewer viewer = new LineSelectionViewer(parent, ruler, getOverviewRuler(),
+ isOverviewRulerVisible(), styles);
+ // isOverviewRulerVisible(), styles | SWT.WRAP);
+ getSourceViewerDecorationSupport(viewer);
+
+ return viewer;
+ }
+
+ /**
+ * Create an annotated line with an "empty" entity, i.e. using the editor
+ * input's default entity type and a zero-length title cache.
+ *
+ * @return a {@link eu.etaxonomy.taxeditor.annotatedlineeditor.LineAnnotation} object.
+ */
+ public LineAnnotation createAnnotatedLineNewObject() {
+
+ // Create new object
+
+ AnnotatedLineDocumentProvider documentProvider = (AnnotatedLineDocumentProvider) getDocumentProvider();
+ IEntityCreator entityCreator = documentProvider.getEntityCreator(getEditorInput());
+ Object entity = entityCreator.createEntity(null);
+
+ LineAnnotation annotation = createAnnotatedLine(entity);
+ if (annotation != null) {
+ annotation.markAsNew(true);
+ }
+ return annotation;
+ }
+
+ /**
+ * Create an annotated line, first creating an entity of type "key" - this key
+ * must be recognized by the editor's entity creator.
+ *
+ * @param key a {@link java.lang.Object} object.
+ * @param titleCache a {@link java.lang.String} object.
+ * @return a {@link eu.etaxonomy.taxeditor.annotatedlineeditor.LineAnnotation} object.
+ */
+ public LineAnnotation createAnnotatedLineNewObject(Object key, String titleCache) {
+
+
+
+ // Create new object
+ Object entity = ((AnnotatedLineDocumentProvider) getDocumentProvider()).
+ getEntityCreator(getEditorInput()).createEntity(key, titleCache);
+ // checks if the creator also saves the entity (in a different conversation), in which case
+ // we need to bind back this editors conversation
+ // we also need to reload the entity because the conversation used to
+ // to create / save the entity may have been closed
+ if(entity != null && ((AnnotatedLineDocumentProvider) getDocumentProvider()).getEntityCreator(getEditorInput()).savesEntity()) {
+ getConversationHolder().bind();
+ Object object = CdmStore.getService(IOccurrenceService.class).load(((CdmBase)entity).getUuid());
+ entity = HibernateProxyHelper.deproxy(object);
+ }
+
+ if(entity == null) {
+ return null;
+ }
+ LineAnnotation annotation = createAnnotatedLine(entity);
+ if (annotation != null) {
+ annotation.markAsNew(true);
+ }
+
+ return annotation;
+
+ }
+
+ @Override
+ public boolean isDirty() {
+ return super.isDirty();
+ }
+
+ /**
+ * Creates an annotated line at the end of the document. The annotation contains the entity.
+ *
+ * @param entity a {@link java.lang.Object} object.
+ * @return a {@link eu.etaxonomy.taxeditor.annotatedlineeditor.LineAnnotation} object.
+ */
+ public LineAnnotation createAnnotatedLine(Object entity) {
+
+ IEditorInput input = getEditorInput();
+ AnnotatedLineDocumentProvider provider = (AnnotatedLineDocumentProvider) getDocumentProvider();
+
+ LineAnnotation annotation = null;
+ try {
+ annotation = provider.createAnnotatedLine(input, entity);
+
+ // Jump to new line
+ IAnnotationModel model = provider.getAnnotationModel(input);
+ if(model != null){
+ int start= model.getPosition(annotation).getOffset();
+ selectAndReveal(start, 0);
+ }
+
+ } catch (BadLocationException e) {
+ // TODO Auto-generated catch block
+ e.printStackTrace();
+ }
+ return annotation;
+ }
+
+ /**
+ * <p>removeAnnotatedLine</p>
+ *
+ * @param lineno a int.
+ */
+ public void removeAnnotatedLine(int lineno) {
+ ((AnnotatedLineDocumentProvider) getDocumentProvider()).removeAnnotatedLine(lineno);
+ }
+
+ /**
+ * <p>removeAnnotatedLine</p>
+ *
+ * @param annotation a {@link eu.etaxonomy.taxeditor.annotatedlineeditor.LineAnnotation} object.
+ */
+ public void removeAnnotatedLine(LineAnnotation annotation) {
+ ((AnnotatedLineDocumentProvider) getDocumentProvider()).removeAnnotatedLine(annotation);
+ }
+
+ /* (non-Javadoc)
+ * @see org.eclipse.ui.texteditor.AbstractTextEditor#doSave(org.eclipse.core.runtime.IProgressMonitor)
+ */
+ /** {@inheritDoc} */
+ @Override
+ public void doSave(IProgressMonitor progressMonitor) {
+ if (getConversationHolder() != null) {
+ if( ! getConversationHolder().isBound()){
+ getConversationHolder().bind();
+ }
+ super.doSave(progressMonitor);
+ getConversationHolder().commit(true);
+ } else {
+ super.doSave(progressMonitor);
+ }
+ firePropertyChange(PROP_DIRTY);
+ }
+
+ /* (non-Javadoc)
+ * @see org.eclipse.ui.texteditor.AbstractTextEditor#setFocus()
+ */
+ /** {@inheritDoc} */
+ @Override
+ public void setFocus() {
+ super.setFocus();
+ if (getConversationHolder() != null) {
+ getConversationHolder().bind();
+ }
+ ((AbstractBulkEditorInput)getEditorInput()).bind();
+ PlatformUI.getWorkbench().getActiveWorkbenchWindow().getShell().setFocus();
+ // TODO pass focus to underlying widgets
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.cdm.api.conversation.IConversationEnabled#getConversationHolder()
+ */
+ /**
+ * <p>getConversationHolder</p>
+ *
+ * @return a {@link eu.etaxonomy.cdm.api.conversation.ConversationHolder} object.
+ */
+ @Override
public ConversationHolder getConversationHolder() {
- return conversation;
- }
-
- /* (non-Javadoc)
- * @see eu.etaxonomy.cdm.persistence.hibernate.ICdmPostDataChangeObserver#update(eu.etaxonomy.cdm.persistence.hibernate.CdmDataChangeMap)
- */
- /** {@inheritDoc} */
- @Override
+ return conversation;
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.cdm.persistence.hibernate.ICdmPostDataChangeObserver#update(eu.etaxonomy.cdm.persistence.hibernate.CdmDataChangeMap)
+ */
+ /** {@inheritDoc} */
+ @Override
public void update(CdmDataChangeMap changeEvents) {}
- /**
- * Refreshes text in all lines.
- */
- protected void refreshLineDisplay() {
- IDocumentProvider provider = getDocumentProvider();
- IEditorInput input = getEditorInput();
- IAnnotationModel model = provider.getAnnotationModel(input);
- Iterator iter = getDocumentProvider().getAnnotationModel(getEditorInput()).getAnnotationIterator();
- while (iter.hasNext()) {
- Object next = iter.next();
- if (next instanceof LineAnnotation) {
- LineAnnotation annotation = (LineAnnotation) next;
- ((AnnotatedLineDocumentProvider) getDocumentProvider()).
- updateLineFromAnnotation(annotation);
- }
- }
- }
-
- /* (non-Javadoc)
- * @see eu.etaxonomy.taxeditor.operations.IPostOperationEnabled#postOperation(eu.etaxonomy.cdm.model.common.CdmBase)
- */
- /** {@inheritDoc} */
- @Override
+ /**
+ * Refreshes text in all lines.
+ */
+ protected void refreshLineDisplay() {
+ IDocumentProvider provider = getDocumentProvider();
+ IEditorInput input = getEditorInput();
+ IAnnotationModel model = provider.getAnnotationModel(input);
+ Iterator iter = getDocumentProvider().getAnnotationModel(getEditorInput()).getAnnotationIterator();
+ while (iter.hasNext()) {
+ Object next = iter.next();
+ if (next instanceof LineAnnotation) {
+ LineAnnotation annotation = (LineAnnotation) next;
+ ((AnnotatedLineDocumentProvider) getDocumentProvider()).
+ updateLineFromAnnotation(annotation);
+ }
+ }
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.operations.IPostOperationEnabled#postOperation(eu.etaxonomy.cdm.model.common.CdmBase)
+ */
+ /** {@inheritDoc} */
+ @Override
public boolean postOperation(CdmBase objectAffectedByOperation) {
- refreshLineDisplay();
-
- return true;
- }
-
- /* (non-Javadoc)
- * @see org.eclipse.ui.editors.text.TextEditor#dispose()
- */
- /** {@inheritDoc} */
- @Override
- public void dispose() {
- super.dispose();
- conversation.close();
- }
-
- /**
- * <p>onComplete</p>
- *
- * @return a boolean.
- */
- @Override
+ refreshLineDisplay();
+
+ return true;
+ }
+
+ /* (non-Javadoc)
+ * @see org.eclipse.ui.editors.text.TextEditor#dispose()
+ */
+ /** {@inheritDoc} */
+ @Override
+ public void dispose() {
+ super.dispose();
+ conversation.close();
+ ((AbstractBulkEditorInput)getEditorInput()).dispose();
+ }
+
+ /**
+ * <p>onComplete</p>
+ *
+ * @return a boolean.
+ */
+ @Override
public boolean onComplete() {
- // TODO Auto-generated method stub
- return false;
- }
+ // TODO Auto-generated method stub
+ return false;
+ }
+
}
// $Id$
/**
* Copyright (C) 2007 EDIT
-* European Distributed Institute of Taxonomy
+* European Distributed Institute of Taxonomy
* http://www.e-taxonomy.eu
-*
+*
* The contents of this file are subject to the Mozilla Public License Version 1.1
* See LICENSE.TXT at the top of this package for the full license terms.
*/
* @return a T object.
*/
T getEntity();
-
+
+ void setEntity(Object entity);
+
/**
* <p>getEditableText</p>
*
* @return a {@link java.lang.String} object.
*/
String getEditableText();
-
+
/**
* <p>getAttachedEntities</p>
*
* @return a {@link java.util.Set} object.
*/
Set<T> getAttachedEntities();
-
+
/**
* <p>markAsMerged</p>
*
* @param mergeTarget a T object.
*/
void markAsMerged(T mergeTarget);
-
+
/**
* <p>markAsDeleted</p>
*/
void markAsDeleted();
-
+
/**
* <p>markAsNew</p>
*
* @param isNew a boolean.
*/
void markAsNew(boolean isNew);
-
+
/**
* <p>isMarkedAsMerged</p>
*
* @return a boolean.
*/
boolean isMarkedAsMerged();
-
+
/**
* <p>isMarkedAsDeleted</p>
*
* @return a boolean.
*/
boolean isMarkedAsDeleted();
-
+
/**
* <p>isMarkedAsNew</p>
*
// $Id$
/**
* Copyright (C) 2007 EDIT
-* European Distributed Institute of Taxonomy
+* European Distributed Institute of Taxonomy
* http://www.e-taxonomy.eu
-*
+*
* The contents of this file are subject to the Mozilla Public License Version 1.1
* See LICENSE.TXT at the top of this package for the full license terms.
*/
* @version 1.0
*/
public interface IEntityPersistenceService<T> {
-
+
/**
* <p>create</p>
*
* @param entity a {@link java.lang.Object} object.
* @return a boolean.
*/
- boolean create(T entity);
-
+ T create(T entity);
+
/**
* <p>save</p>
*
* @param entity a {@link java.lang.Object} object.
* @return a boolean.
*/
- boolean save(T entity);
-
+ T save(T entity);
+
/**
* <p>merge</p>
*
* @return a boolean.
*/
boolean merge(T entity, T mergeTarget);
-
+
/**
* <p>delete</p>
*
* @param entity a {@link java.lang.Object} object.
* @return a boolean.
- * @throws ReferencedObjectUndeletableException
+ * @throws ReferencedObjectUndeletableException
*/
boolean delete(T entity) throws ReferencedObjectUndeletableException;
}
// $Id$
/**
* Copyright (C) 2007 EDIT
-* European Distributed Institute of Taxonomy
+* European Distributed Institute of Taxonomy
* http://www.e-taxonomy.eu
-*
+*
* The contents of this file are subject to the Mozilla Public License Version 1.1
* See LICENSE.TXT at the top of this package for the full license terms.
*/
/** Constant <code>TYPE_GENERIC="Annotation.TYPE_UNKNOWN"</code> */
public static final String TYPE_GENERIC = Annotation.TYPE_UNKNOWN;
-
+
private T entity;
private ILineDisplayStrategy lineDisplayStrategy;
private boolean markedAsNew;
private T mergeTarget;
-
+
/**
* <p>Constructor for LineAnnotation.</p>
*
this.lineDisplayStrategy = lineDisplayStrategy;
setType(TYPE_GENERIC);
}
-
+
/* (non-Javadoc)
* @see org.eclipse.jface.text.source.Annotation#getText()
*/
public String getText() {
return getEditableText();
}
-
+
/* (non-Javadoc)
* @see org.eclipse.jface.text.source.Annotation#setText(java.lang.String)
*/
@Override
public void setText(String text) {
lineDisplayStrategy.setText(text, entity);
- dirty = true;
+ dirty = true;
super.setText(text);
}
-
+
/** {@inheritDoc} */
@Override
public String toString() {
// For debugging
return getText();
}
-
+
/* (non-Javadoc)
* @see eu.etaxonomy.taxeditor.bulkeditor.IEntityContainer#getAttachedEntities()
*/
*
* @return a {@link java.util.Set} object.
*/
- public Set getAttachedEntities() {
+ @Override
+ public Set getAttachedEntities() {
// TODO Auto-generated method stub
return null;
}
*
* @return a T object.
*/
- public T getEntity() {
+ @Override
+ public T getEntity() {
return entity;
}
*
* @return a {@link java.lang.String} object.
*/
- public String getEditableText() {
+ @Override
+ public String getEditableText() {
return lineDisplayStrategy.getText(entity);
}
*
* @return a T object.
*/
- public T getMergeTarget() {
+ @Override
+ public T getMergeTarget() {
return mergeTarget;
}
*
* @return a boolean.
*/
- public boolean isMarkedAsDeleted() {
+ @Override
+ public boolean isMarkedAsDeleted() {
return super.isMarkedDeleted();
}
*
* @return a boolean.
*/
- public boolean isMarkedAsMerged() {
+ @Override
+ public boolean isMarkedAsMerged() {
return markedAsMerged;
}
*
* @return a boolean.
*/
- public boolean isMarkedAsNew() {
+ @Override
+ public boolean isMarkedAsNew() {
return markedAsNew;
}
/**
* <p>markAsDeleted</p>
*/
- public void markAsDeleted() {
+ @Override
+ public void markAsDeleted() {
super.markDeleted(true);
if (!isMarkedAsMerged()) {
lineDisplayStrategy.setStatusMessage(entity + " deleted.", entity);
*
* @param mergeTarget a T object.
*/
- public void markAsMerged(T mergeTarget) {
+ @Override
+ public void markAsMerged(T mergeTarget) {
this.mergeTarget = mergeTarget;
markedAsMerged = true;
lineDisplayStrategy.setStatusMessage("'" + entity + "' merged into '" + mergeTarget + "'.", entity);
* @see eu.etaxonomy.taxeditor.bulkeditor.IEntityContainer#markAsNew()
*/
/** {@inheritDoc} */
- public void markAsNew(boolean isNew) {
+ @Override
+ public void markAsNew(boolean isNew) {
markedAsNew = isNew;
lineDisplayStrategy.setStatusMessage("New entity created.", entity);
}
* @see eu.etaxonomy.taxeditor.bulkeditor.IEntityContainer#setDirty(boolean)
*/
/** {@inheritDoc} */
- public void setDirty(boolean dirty) {
+ @Override
+ public void setDirty(boolean dirty) {
this.dirty = dirty;
}
*
* @return a boolean.
*/
- public boolean isDirty() {
+ @Override
+ public boolean isDirty() {
return dirty;
}
public String getHoverText() {
return lineDisplayStrategy.getHoverText(entity);
}
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.annotatedlineeditor.IEntityContainer#setEntity(java.lang.Object)
+ */
+ @Override
+ public void setEntity(Object entity) {
+ this.entity = (T) entity;
+ }
}
displayWarningDialog();
isInitialFocus = false;
}
+ super.setFocus();
}
private void displayWarningDialog() {
import java.util.ArrayList;
import java.util.List;
-import java.util.Map;
import org.apache.commons.lang.StringUtils;
import org.eclipse.jface.action.IStatusLineManager;
import eu.etaxonomy.cdm.model.common.IAnnotatableEntity;
import eu.etaxonomy.cdm.model.common.ICdmBase;
import eu.etaxonomy.cdm.model.common.Marker;
-import eu.etaxonomy.cdm.model.common.MarkerType;
import eu.etaxonomy.cdm.model.name.TaxonNameBase;
import eu.etaxonomy.cdm.model.reference.Reference;
import eu.etaxonomy.taxeditor.annotatedlineeditor.EntityListener;
import eu.etaxonomy.taxeditor.annotatedlineeditor.ILineDisplayStrategy;
import eu.etaxonomy.taxeditor.bulkeditor.input.AbstractBulkEditorInput;
-import eu.etaxonomy.taxeditor.preference.PreferencesUtil;
/**
* <p>BulkEditorLineDisplay class.</p>
if (entity instanceof IAnnotatableEntity) {
IAnnotatableEntity annotatableEntity = (IAnnotatableEntity) HibernateProxyHelper.deproxy(entity);
- Map<MarkerType, Boolean> editMarkerTypePreferences = PreferencesUtil.getEditMarkerTypePreferences();
-
String markerText = "";
List<String> markers = new ArrayList<String>();
for (Marker marker : annotatableEntity.getMarkers()) {
// $Id$
/**
* Copyright (C) 2007 EDIT
-* European Distributed Institute of Taxonomy
+* European Distributed Institute of Taxonomy
* http://www.e-taxonomy.eu
-*
+*
* The contents of this file are subject to the Mozilla Public License Version 1.1
* See LICENSE.TXT at the top of this package for the full license terms.
*/
package eu.etaxonomy.taxeditor.bulkeditor.handler;
-import java.util.Iterator;
-import java.util.Set;
-import java.util.UUID;
+import java.util.ArrayList;
+import java.util.List;
import org.eclipse.core.commands.AbstractHandler;
import org.eclipse.core.commands.ExecutionEvent;
import org.eclipse.core.commands.ExecutionException;
-import org.eclipse.jface.dialogs.MessageDialog;
import org.eclipse.jface.viewers.ISelection;
import org.eclipse.jface.viewers.IStructuredSelection;
import org.eclipse.ui.IEditorInput;
import org.eclipse.ui.IEditorPart;
-import org.eclipse.ui.IViewPart;
-import org.eclipse.ui.IViewReference;
-import org.eclipse.ui.PlatformUI;
import org.eclipse.ui.handlers.HandlerUtil;
import org.eclipse.ui.texteditor.IDocumentProvider;
-import org.eclipse.ui.IWorkbenchPage;
+import eu.etaxonomy.cdm.api.application.ICdmApplicationConfiguration;
import eu.etaxonomy.cdm.api.service.DeleteResult;
import eu.etaxonomy.cdm.api.service.IAgentService;
import eu.etaxonomy.cdm.api.service.IGroupService;
import eu.etaxonomy.cdm.api.service.ITaxonService;
import eu.etaxonomy.cdm.api.service.IUserService;
import eu.etaxonomy.cdm.api.service.config.NameDeletionConfigurator;
-import eu.etaxonomy.cdm.hibernate.HibernateProxyHelper;
import eu.etaxonomy.cdm.model.agent.TeamOrPersonBase;
-import eu.etaxonomy.cdm.model.common.CdmBase;
import eu.etaxonomy.cdm.model.common.Group;
-import eu.etaxonomy.cdm.model.common.IdentifiableEntity;
import eu.etaxonomy.cdm.model.common.User;
import eu.etaxonomy.cdm.model.name.TaxonNameBase;
import eu.etaxonomy.cdm.model.occurrence.SpecimenOrObservationBase;
import eu.etaxonomy.cdm.model.taxon.Synonym;
import eu.etaxonomy.cdm.model.taxon.Taxon;
import eu.etaxonomy.cdm.model.taxon.TaxonBase;
-import eu.etaxonomy.cdm.persistence.dao.hibernate.HibernateBeanInitializer;
-import eu.etaxonomy.cdm.api.application.ICdmApplicationConfiguration;
import eu.etaxonomy.taxeditor.annotatedlineeditor.IEntityPersistenceService;
import eu.etaxonomy.taxeditor.annotatedlineeditor.LineAnnotation;
import eu.etaxonomy.taxeditor.annotatedlineeditor.LineAnnotationModel;
import eu.etaxonomy.taxeditor.bulkeditor.BulkEditor;
import eu.etaxonomy.taxeditor.bulkeditor.internal.TaxeditorBulkeditorPlugin;
-import eu.etaxonomy.taxeditor.bulkeditor.referencingobjects.ReferencingObjectsView;
+import eu.etaxonomy.taxeditor.model.DeleteResultMessagingUtils;
import eu.etaxonomy.taxeditor.model.MessagingUtils;
-import eu.etaxonomy.taxeditor.preference.IPreferenceKeys;
-import eu.etaxonomy.taxeditor.preference.PreferencesUtil;
import eu.etaxonomy.taxeditor.store.CdmStore;
*/
@Override
public Object execute(ExecutionEvent event) throws ExecutionException {
-
+
ISelection selection = HandlerUtil.getCurrentSelection(event);
-
+
IEditorPart editor = HandlerUtil.getActiveEditor(event);
-
+
IEditorInput input = editor.getEditorInput();
-
+
if((input instanceof IEntityPersistenceService) && (selection instanceof IStructuredSelection)){
-
-
+
+
IDocumentProvider provider = ((BulkEditor) editor).getDocumentProvider();
- LineAnnotationModel model =
+ LineAnnotationModel model =
(LineAnnotationModel) provider.getAnnotationModel(input);
-
-
+
+
IStructuredSelection structuredSelection = (IStructuredSelection) selection;
-
+
IEntityPersistenceService persistenceService = (IEntityPersistenceService) input;
-
-
+
+
for(Object object : structuredSelection.toList()){
-
+
LineAnnotation annotation = (LineAnnotation) model.getAnnotation(object);
- DeleteResult result = new DeleteResult();
+ DeleteResult result = new DeleteResult();
+ String errorMessage= "The object ";
//result.setError();
try {
ICdmApplicationConfiguration controller;
- controller = (ICdmApplicationConfiguration) CdmStore.getCurrentApplicationConfiguration();
- //persistenceService.delete(object);
+ controller = CdmStore.getCurrentApplicationConfiguration();
+
if (object instanceof SpecimenOrObservationBase){
-
IOccurrenceService service = controller.getOccurrenceService();
- SpecimenOrObservationBase persistedObject = service.load(((SpecimenOrObservationBase) object).getUuid());
- if (persistedObject != null){
- result = service.delete(persistedObject);
- }
+ if (object != null){
+ result = service.delete(((SpecimenOrObservationBase) object).getUuid());
+ errorMessage = "The specimen or observation ";
+ }
} else if (object instanceof Reference){
IReferenceService service = controller.getReferenceService();
-
- Reference persistedObject = service.load(((Reference) object).getUuid());
- if (persistedObject != null){
- result = service.delete(persistedObject);
+ if (object != null){
+ result = service.delete(((Reference) object).getUuid());
+ errorMessage = "The reference ";
}
-
+
} else if (object instanceof Group){
IGroupService service = controller.getGroupService();
- Group persistedObject = service.load(((Group) object).getUuid());
- if (persistedObject != null){
- result = service.delete(persistedObject);
+ if (object != null){
+ result = service.delete(((Group) object).getUuid());
+ errorMessage = "The group ";
}
}else if (object instanceof User){
IUserService service = controller.getUserService();
- User persistedObject = service.load(((User) object).getUuid());
- if (persistedObject != null){
- result = service.delete(persistedObject);
+ if (object != null){
+ result = service.delete(((User) object).getUuid());
+ errorMessage = "The user ";
}
} else if (object instanceof TaxonNameBase){
INameService service = controller.getNameService();
- TaxonNameBase name = service.load(((TaxonNameBase) object).getUuid());
- if (name != null){
+ if (object != null){
NameDeletionConfigurator config = new NameDeletionConfigurator();
-
- result = service.delete(name.getUuid(), config);
- }
+ result = service.delete(((TaxonNameBase) object).getUuid(), config);
+ errorMessage = "The name ";
+ }
} else if (object instanceof TaxonBase){
ITaxonService service = controller.getTaxonService();
- TaxonBase taxonBase = service.load(((TaxonBase) object).getUuid());
- if (taxonBase != null){
+ if (object != null){
if (object instanceof Taxon){
result = service.deleteTaxon(((TaxonBase) object).getUuid(), null, null);
+ errorMessage = "The taxon ";
}else{
- result = service.deleteSynonym((Synonym)object, null);
+ result = service.deleteSynonym(((Synonym)object).getUuid(), null);
+ errorMessage = "The synonym ";
}
}
} else if (object instanceof TeamOrPersonBase){
IAgentService service = controller.getAgentService();
- TeamOrPersonBase teamOrPerson = (TeamOrPersonBase)service.load(((TeamOrPersonBase) object).getUuid());
- result = service.delete((TeamOrPersonBase)object);
+ //TeamOrPersonBase teamOrPerson = (TeamOrPersonBase)service.load(((TeamOrPersonBase) object).getUuid());
+ result = service.delete(((TeamOrPersonBase)object).getUuid());
+ errorMessage = "The team or person ";
}
} catch (Exception e){
MessagingUtils.errorDialog("Exception occured. Delete not possible", getClass(), e.getMessage(), TaxeditorBulkeditorPlugin.PLUGIN_ID, null, true);
}
if (result.isError() || result.isAbort()){
if (!result.getExceptions().isEmpty()) {
- String message = null;
+ List<String> messages = new ArrayList<String>();
int i = result.getExceptions().size();
for (Exception e:result.getExceptions()){
- i--;
- message+= e.getMessage();
- if (i>0){
- message+= ", ";
- }
+ messages.add(e.getMessage());
}
-
-
- MessagingUtils.messageDialog("Delete not possible", getClass(), result.getExceptions().toString(), null);
+ errorMessage += "could not be deleted.";
+ //MessagingUtils.errorDialog("test", getClass(), "message", TaxeditorBulkeditorPlugin.PLUGIN_ID, result.getExceptions().iterator().next(),true);
+ DeleteResultMessagingUtils.messageDialogWithDetails(result,errorMessage, TaxeditorBulkeditorPlugin.PLUGIN_ID);
}else{
MessagingUtils.messageDialog("Delete not possible", getClass(), "The object could not be deleted. An exception occured.", null);
-
}
}
if (result.isOk() ){
((BulkEditor) editor).removeAnnotatedLine(annotation);
if(result.getUpdatedObjects().size() != 0 || !result.getExceptions().isEmpty()){
- MessagingUtils.informationDialog("Delete successfull", "The object is deleted but there are updated objects: " + result.toString());
+ List<String> messages = new ArrayList<String>();
+ int i = result.getExceptions().size();
+ for (Exception e:result.getExceptions()){
+ messages.add(e.getMessage());
+ }
+ errorMessage += "was deleted but related object(s) could not be deleted. ";
+ //MessagingUtils.errorDialog("test", getClass(), "message", TaxeditorBulkeditorPlugin.PLUGIN_ID, result.getExceptions().iterator().next(),true);
+ DeleteResultMessagingUtils.messageDialogWithDetails(result, errorMessage, TaxeditorBulkeditorPlugin.PLUGIN_ID);
}
}
-
- }
+
+ }
}
-
-
+
+
return null;
}
import java.util.Collections;
import java.util.Comparator;
import java.util.List;
+import java.util.Map;
import java.util.UUID;
import org.eclipse.jface.resource.ImageDescriptor;
import eu.etaxonomy.taxeditor.bulkeditor.input.sortprovider.CdmBaseSortProvider;
import eu.etaxonomy.taxeditor.bulkeditor.input.sortprovider.TitleCacheComparator;
import eu.etaxonomy.taxeditor.bulkeditor.internal.TaxeditorBulkeditorPlugin;
+import eu.etaxonomy.taxeditor.editor.CdmEntitySessionInput;
import eu.etaxonomy.taxeditor.model.MessagingUtils;
import eu.etaxonomy.taxeditor.store.CdmStore;
* @version 1.0
* @param <T>
*/
-public abstract class AbstractBulkEditorInput<T extends ICdmBase> implements IEditorInput, IEntityPersistenceService<T> {
+public abstract class AbstractBulkEditorInput<T extends ICdmBase> extends CdmEntitySessionInput implements IEditorInput ,
+ IEntityPersistenceService<T> {
private UUID entityUuid;
private static Class serviceClass;
+ public AbstractBulkEditorInput() {
+ super(true);
+ }
+
/**
* <p>NewInstance</p>
*
/** {@inheritDoc} */
@Override
- public boolean create(T entity) {
+ public T create(T entity) {
return save(entity);
}
/**
* @return
*/
- public List<?> getModel() {
+ public List<T> getModel() {
return model;
}
+ protected boolean replaceInModel(T entity) {
+ int index = model.indexOf(entity);
+ if(index >= 0) {
+ model.set(index, entity);
+ return true;
+ } else {
+ return false;
+ }
+ }
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled#getRootEntities()
+ */
+ @Override
+ public List<T> getRootEntities() {
+ return getModel();
+ }
+
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled#getPropertyPathsMap()
+ */
+ @Override
+ public Map<Object, List<String>> getPropertyPathsMap() {
+ // TODO Auto-generated method stub
+ return null;
+ }
}
return ID;
}
+
@Override
public String getName() {
return BulkEditorInputType.AGENT.label;
}
+
@Override
public String getToolTipText() {
return getName();
return true;
}
+
/** {@inheritDoc} */
@Override
public boolean isConvertingEnabled() {
public boolean delete(AgentBase entity) throws ReferencedObjectUndeletableException {
-
return CdmStore.getService(IAgentService.class).delete(entity) != null;
}
return sortProviders;
}
+
@Override
protected IEntityCreator<TeamOrPersonBase> createEntityCreator() {
return new AgentCreator();
}
@Override
- public boolean save(TeamOrPersonBase entity) {
- return CdmStore.getService(IAgentService.class).saveOrUpdate(entity) != null;
+ public TeamOrPersonBase save(TeamOrPersonBase entity) {
+ if(CdmStore.getCurrentSessionManager().isRemoting()) {
+ return (TeamOrPersonBase) CdmStore.getService(IAgentService.class).merge(entity, true).getMergedEntity();
+ } else {
+ CdmStore.getService(IAgentService.class).saveOrUpdate(entity) ;
+ return entity;
+ }
}
@Override
return false;
}
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.editor.CdmEntitySessionInput#merge()
+ */
+ @Override
+ public void merge() {
+
+ }
+
+
}
// $Id$
/**
* Copyright (C) 2007 EDIT
-* European Distributed Institute of Taxonomy
+* European Distributed Institute of Taxonomy
* http://www.e-taxonomy.eu
-*
+*
* The contents of this file are subject to the Mozilla Public License Version 1.1
* See LICENSE.TXT at the top of this package for the full license terms.
*/
package eu.etaxonomy.taxeditor.bulkeditor.input;
-import java.util.Arrays;
import java.util.List;
-import java.util.UUID;
import eu.etaxonomy.cdm.api.service.IGroupService;
import eu.etaxonomy.cdm.api.service.config.IIdentifiableEntityServiceConfigurator;
public class GroupEditorInput extends AbstractBulkEditorInput<Group> {
public static final String ID = "bulkeditor.input.group";
-
+
private static GroupEditorInput instance;
-
+
/**
* @return the instance
*/
}
return instance;
}
-
+
/* (non-Javadoc)
* @see org.eclipse.ui.IEditorInput#getName()
*/
* @see eu.etaxonomy.taxeditor.annotatedlineeditor.IEntityPersistenceService#save(java.lang.Object)
*/
@Override
- public boolean save(Group entity) {
- return CdmStore.getService(IGroupService.class).saveOrUpdate(entity) != null;
+ public Group save(Group entity) {
+ if(CdmStore.getCurrentSessionManager().isRemoting()) {
+ return CdmStore.getService(IGroupService.class).merge(entity, true).getMergedEntity();
+ } else {
+ CdmStore.getService(IGroupService.class).saveOrUpdate(entity);
+ return entity;
+ }
}
/* (non-Javadoc)
/* (non-Javadoc)
* @see eu.etaxonomy.taxeditor.bulkeditor.input.AbstractBulkEditorInput#loadEntity(java.util.UUID)
-
+
@Override
protected Group loadEntity(UUID entityUuid) {
- List<String> propertyPaths = Arrays.asList(new String[]{});
+ List<String> propertyPaths = Arrays.asList(new String[]{});
return CdmStore.getService(IGroupService.class).load(entityUuid, propertyPaths);
}
*/
protected IEntityCreator<Group> createEntityCreator() {
return new GroupCreator();
}
-
+
/* (non-Javadoc)
* @see eu.etaxonomy.taxeditor.bulkeditor.input.AbstractBulkEditorInput#getText(eu.etaxonomy.cdm.model.common.ICdmBase)
*/
return entity.getName();
}
-
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.editor.CdmEntitySessionInput#merge()
+ */
+ @Override
+ public void merge() {
+
+ }
+
+
}
// $Id$
/**
* Copyright (C) 2007 EDIT
-* European Distributed Institute of Taxonomy
+* European Distributed Institute of Taxonomy
* http://www.e-taxonomy.eu
-*
+*
* The contents of this file are subject to the Mozilla Public License Version 1.1
* See LICENSE.TXT at the top of this package for the full license terms.
*/
package eu.etaxonomy.taxeditor.bulkeditor.input;
-import java.util.Arrays;
import java.util.List;
-import java.util.UUID;
import eu.etaxonomy.cdm.api.service.INameService;
import eu.etaxonomy.cdm.api.service.config.IIdentifiableEntityServiceConfigurator;
-import eu.etaxonomy.cdm.api.service.exception.ReferencedObjectUndeletableException;
import eu.etaxonomy.cdm.model.name.TaxonNameBase;
import eu.etaxonomy.taxeditor.annotatedlineeditor.IEntityCreator;
import eu.etaxonomy.taxeditor.bulkeditor.IBulkEditorSortProvider;
public class NameEditorInput extends AbstractBulkEditorInput<TaxonNameBase> {
/**
- *
+ *
*/
private static final long serialVersionUID = -3085029575759626823L;
private static NameEditorInput instance;
/** Constant <code>ID="bulkeditor.input.name"</code> */
public static final String ID = "bulkeditor.input.name";
-
+
/**
* <p>Getter for the field <code>instance</code>.</p>
*
}
return instance;
}
-
+
/* (non-Javadoc)
* @see org.eclipse.ui.IEditorInput#getName()
*/
*
* @return a {@link java.lang.String} object.
*/
- public String getName() {
+ @Override
+ public String getName() {
return BulkEditorInputType.NAME.label;
}
*
* @return a {@link java.lang.String} object.
*/
- public String getToolTipText() {
+ @Override
+ public String getToolTipText() {
return getName();
}
return CdmStore.getSearchManager().findNames(configurator);
}
- /** {@inheritDoc}
+ /** {@inheritDoc}
@Override
public TaxonNameBase loadEntity(UUID uuid) {
- List<String> propertyPaths = Arrays.asList(new String[]{});
+ List<String> propertyPaths = Arrays.asList(new String[]{});
return CdmStore.getService(INameService.class).load(uuid, propertyPaths);
}
*/
- /** {@inheritDoc}
+ /** {@inheritDoc}
**/
- public boolean delete(TaxonNameBase entity) {
+ @Override
+ public boolean delete(TaxonNameBase entity) {
return CdmStore.getService(INameService.class).delete(entity) != null;
}
/** {@inheritDoc} */
- public boolean save(TaxonNameBase entity) {
- return CdmStore.getService(INameService.class).saveOrUpdate(entity) != null;
+ @Override
+ public TaxonNameBase save(TaxonNameBase entity) {
+ if(CdmStore.getCurrentSessionManager().isRemoting()) {
+ return CdmStore.getService(INameService.class).merge(entity, true).getMergedEntity();
+ } else {
+ CdmStore.getService(INameService.class).saveOrUpdate(entity);
+ return entity;
+ }
}
/* (non-Javadoc)
@Override
public List<IBulkEditorSortProvider<TaxonNameBase>> getSortProviders() {
List<IBulkEditorSortProvider<TaxonNameBase>> sortProviders = super.getSortProviders();
-
+
sortProviders.add(0, new IdentifiableEntitySortProvider<TaxonNameBase>());
-
+
return sortProviders;
}
-
+
/* (non-Javadoc)
* @see eu.etaxonomy.taxeditor.bulkeditor.input.AbstractBulkEditorInput#getTypeText(java.lang.Object)
*/
}
return super.getTypeText(entity);
}
-
+
/* (non-Javadoc)
* @see eu.etaxonomy.taxeditor.bulkeditor.input.AbstractBulkEditorInput#getText(eu.etaxonomy.cdm.model.common.ICdmBase)
*/
return (entity).getFullTitleCache();
}
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.editor.CdmEntitySessionInput#merge()
+ */
+ @Override
+ public void merge() {
+
+ }
+
}
// $Id$
/**
* Copyright (C) 2007 EDIT
-* European Distributed Institute of Taxonomy
+* European Distributed Institute of Taxonomy
* http://www.e-taxonomy.eu
-*
+*
* The contents of this file are subject to the Mozilla Public License Version 1.1
* See LICENSE.TXT at the top of this package for the full license terms.
*/
public class NameRelationshipEditorInput extends AbstractBulkEditorInput<NameRelationship> {
/**
- *
+ *
*/
private static final long serialVersionUID = -7453923697752787687L;
}
return instance;
}
-
+
/* (non-Javadoc)
* @see org.eclipse.ui.IEditorInput#getName()
*/
*/
/** {@inheritDoc} */
@Override
- public boolean save(NameRelationship entity) {
+ public NameRelationship save(NameRelationship entity) {
// TODO Auto-generated method stub
- return false;
+ return null;
}
/* (non-Javadoc)
/** {@inheritDoc} */
@Override
protected NameRelationship loadEntity(UUID entityUuid) {
- List<String> propertyPaths = Arrays.asList(new String[]{});
+ List<String> propertyPaths = Arrays.asList(new String[]{});
return null; // CdmStore.getNameService().load(entityUuid, propertyPaths);
}
MessagingUtils.notImplementedMessage(getClass());
return null;
}
-
+
/* (non-Javadoc)
* @see eu.etaxonomy.taxeditor.bulkeditor.input.AbstractBulkEditorInput#getTypeText(java.lang.Object)
*/
if(entity instanceof NameRelationship){
return ((NameRelationship) entity).getType().getTitleCache();
}
-
+
return super.getTypeText(entity);
}
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.editor.CdmEntitySessionInput#merge()
+ */
+ @Override
+ public void merge() {
+
+ }
+
}
package eu.etaxonomy.taxeditor.bulkeditor.input;
-import java.util.Arrays;
import java.util.List;
-import java.util.UUID;
import eu.etaxonomy.cdm.api.service.IOccurrenceService;
import eu.etaxonomy.cdm.api.service.config.IIdentifiableEntityServiceConfigurator;
import eu.etaxonomy.cdm.api.service.exception.ReferencedObjectUndeletableException;
import eu.etaxonomy.cdm.hibernate.HibernateProxyHelper;
import eu.etaxonomy.cdm.model.occurrence.SpecimenOrObservationBase;
+import eu.etaxonomy.cdm.strategy.cache.common.IIdentifiableEntityCacheStrategy;
import eu.etaxonomy.taxeditor.annotatedlineeditor.IEntityCreator;
import eu.etaxonomy.taxeditor.bulkeditor.IBulkEditorSortProvider;
import eu.etaxonomy.taxeditor.bulkeditor.input.entitycreator.OccurrenceCreator;
/* (non-Javadoc)
* @see eu.etaxonomy.taxeditor.bulkeditor.input.AbstractBulkEditorInput#loadEntity(java.util.UUID)
*/
- /** {@inheritDoc}
+ /** {@inheritDoc}
@Override
protected SpecimenOrObservationBase loadEntity(UUID entityUuid) {
List<String> propertyPaths = Arrays.asList(new String[]{});
/* (non-Javadoc)
* @see eu.etaxonomy.taxeditor.annotatedlineeditor.IEntityPersistenceService#delete(java.lang.Object)
*/
- /** {@inheritDoc}
+ /** {@inheritDoc}
* @throws ReferencedObjectUndeletableException */
@Override
public boolean delete(SpecimenOrObservationBase entity) throws ReferencedObjectUndeletableException {
*/
/** {@inheritDoc} */
@Override
- public boolean save(SpecimenOrObservationBase entity) {
- return CdmStore.getService(IOccurrenceService.class).save(entity) != null;
+ public SpecimenOrObservationBase<IIdentifiableEntityCacheStrategy> save(SpecimenOrObservationBase entity) {
+ if(CdmStore.getCurrentSessionManager().isRemoting()) {
+ return CdmStore.getService(IOccurrenceService.class).merge(entity, true).getMergedEntity();
+ } else {
+ CdmStore.getService(IOccurrenceService.class).save(entity);
+ return entity;
+ }
}
return sortProviders;
}
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.editor.CdmEntitySessionInput#merge()
+ */
+ @Override
+ public void merge() {
+
+ }
}
// $Id$
/**
* Copyright (C) 2007 EDIT
-* European Distributed Institute of Taxonomy
+* European Distributed Institute of Taxonomy
* http://www.e-taxonomy.eu
-*
+*
* The contents of this file are subject to the Mozilla Public License Version 1.1
* See LICENSE.TXT at the top of this package for the full license terms.
*/
public class ReferenceEditorInput extends AbstractBulkEditorInput<Reference> {
/**
- *
+ *
*/
private static final long serialVersionUID = 3806243517765126749L;
/** Constant <code>ID="bulkeditor.input.reference"</code> */
public static final String ID = "bulkeditor.input.reference";
-
+
private static ReferenceEditorInput instance;
/**
public static String getID() {
return ID;
}
-
+
/* (non-Javadoc)
* @see org.eclipse.ui.IEditorInput#getName()
*/
*
* @return a {@link java.lang.String} object.
*/
- public String getName() {
+ @Override
+ public String getName() {
return BulkEditorInputType.REFERENCE.label;
}
*
* @return a {@link java.lang.String} object.
*/
- public String getToolTipText() {
+ @Override
+ public String getToolTipText() {
return getName();
}
public boolean isMergingEnabled() {
return true;
}
-
+
/* (non-Javadoc)
* @see eu.etaxonomy.taxeditor.bulkeditor.input.BulkEditorInput#isMarkerTypeEditingEnabled(eu.etaxonomy.cdm.model.common.MarkerType)
*/
return super.isMarkerTypeEditingEnabled(markerType);
}
-
+
/** {@inheritDoc} */
@Override
public List listEntities(IIdentifiableEntityServiceConfigurator configurator) {
return CdmStore.getSearchManager().findReferences(configurator);
}
-
+
// Entity persistence
-
+
/** {@inheritDoc} */
@Override
public Reference loadEntity(UUID entityUuid) {
- List<String> propertyPaths = Arrays.asList(new String[]{"*", "inReference.*", "authorTeam.*"});
+ List<String> propertyPaths = Arrays.asList(new String[]{"*", "inReference.*", "authorTeam.*"});
return CdmStore.getService(IReferenceService.class).load(entityUuid, propertyPaths);
}
- /** {@inheritDoc}
+ /** {@inheritDoc}
* @throws ReferencedObjectUndeletableException */
- public boolean delete(Reference entity) throws ReferencedObjectUndeletableException {
+ @Override
+ public boolean delete(Reference entity) throws ReferencedObjectUndeletableException {
return CdmStore.getService(IReferenceService.class).delete(entity) != null;
}
/** {@inheritDoc} */
- public boolean save(Reference entity) {
- return CdmStore.getService(IReferenceService.class).saveOrUpdate(entity) != null;
+ @Override
+ public Reference save(Reference entity) {
+ if(CdmStore.getCurrentSessionManager().isRemoting()) {
+ return CdmStore.getService(IReferenceService.class).merge(entity, true).getMergedEntity();
+ } else {
+ CdmStore.getService(IReferenceService.class).saveOrUpdate(entity);
+ return entity;
+ }
}
/* (non-Javadoc)
protected IEntityCreator<Reference> createEntityCreator() {
return new ReferenceCreator();
}
-
+
/* (non-Javadoc)
* @see eu.etaxonomy.taxeditor.bulkeditor.input.AbstractBulkEditorInput#getSortProviders()
*/
@Override
public List<IBulkEditorSortProvider<Reference>> getSortProviders() {
List<IBulkEditorSortProvider<Reference>> sortProviders = super.getSortProviders();
-
+
sortProviders.add(0, new IdentifiableEntitySortProvider<Reference>());
sortProviders.add(1, new ReferenceSortProvider());
-
+
return sortProviders;
}
-
+
/* (non-Javadoc)
* @see eu.etaxonomy.taxeditor.bulkeditor.input.AbstractBulkEditorInput#getTypeText(java.lang.Object)
*/
return super.getTypeText(entity);
}
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.editor.CdmEntitySessionInput#merge()
+ */
+ @Override
+ public void merge() {
+
+ }
+
}
import java.util.List;\r
import java.util.UUID;\r
\r
-import eu.etaxonomy.cdm.api.service.INameService;\r
import eu.etaxonomy.cdm.api.service.ITaxonService;\r
import eu.etaxonomy.cdm.api.service.config.FindTaxaAndNamesConfiguratorImpl;\r
import eu.etaxonomy.cdm.api.service.config.IFindTaxaAndNamesConfigurator;\r
import eu.etaxonomy.cdm.api.service.config.IIdentifiableEntityServiceConfigurator;\r
import eu.etaxonomy.cdm.api.service.exception.ReferencedObjectUndeletableException;\r
import eu.etaxonomy.cdm.hibernate.HibernateProxyHelper;\r
-import eu.etaxonomy.cdm.model.name.TaxonNameBase;\r
import eu.etaxonomy.cdm.model.taxon.Synonym;\r
import eu.etaxonomy.cdm.model.taxon.Taxon;\r
import eu.etaxonomy.cdm.model.taxon.TaxonBase;\r
import eu.etaxonomy.cdm.persistence.query.MatchMode;\r
import eu.etaxonomy.taxeditor.annotatedlineeditor.IEntityCreator;\r
-import eu.etaxonomy.taxeditor.bulkeditor.input.entitycreator.NameCreator;\r
import eu.etaxonomy.taxeditor.bulkeditor.input.entitycreator.TaxonCreator;\r
import eu.etaxonomy.taxeditor.store.CdmStore;\r
\r
private static TaxonEditorInput instance;\r
/** Constant <code>ID="bulkeditor.input.taxon"</code> */\r
public static final String ID = "bulkeditor.input.taxon";\r
- \r
- \r
- \r
+\r
+\r
+\r
/**\r
* <p>Getter for the field <code>instance</code>.</p>\r
*\r
if (instance == null) {\r
instance = new TaxonEditorInput();\r
}\r
- \r
+\r
return instance;\r
}\r
- \r
- \r
+\r
+\r
@Override\r
public String getName() {\r
return BulkEditorInputType.TAXON.label;\r
return getName();\r
}\r
\r
- \r
+\r
/**\r
* <p>getID</p>\r
*\r
public static Object getID() {\r
return ID;\r
}\r
- \r
+\r
/* (non-Javadoc)\r
* @see eu.etaxonomy.taxeditor.bulkeditor.input.BulkEditorInput#isMergingEnabled()\r
*/\r
return false;\r
}\r
@Override\r
- public boolean save(TaxonBase entity) {\r
- return CdmStore.getService(ITaxonService.class).saveOrUpdate(entity) != null;\r
+ public TaxonBase save(TaxonBase entity) {\r
+ if(CdmStore.getCurrentSessionManager().isRemoting()) {\r
+ return CdmStore.getService(ITaxonService.class).merge(entity, true).getMergedEntity();\r
+ } else {\r
+ CdmStore.getService(ITaxonService.class).saveOrUpdate(entity);\r
+ return entity;\r
+ }\r
}\r
\r
- \r
+\r
\r
/** {@inheritDoc} */\r
@Override\r
List<TaxonBase> taxa = CdmStore.getSearchManager().findTaxa(configurator);\r
List<TaxonBase> taxaCopy = new ArrayList<TaxonBase>();\r
for (TaxonBase taxon:taxa){\r
- \r
+\r
if (taxon instanceof Taxon){\r
taxaCopy.add(HibernateProxyHelper.deproxy(taxon, Taxon.class));\r
}else{\r
\r
@Override\r
protected TaxonBase loadEntity(UUID entityUuid) {\r
- List<String> propertyPaths = Arrays.asList(new String[]{}); \r
+ List<String> propertyPaths = Arrays.asList(new String[]{});\r
return CdmStore.getService(ITaxonService.class).load(entityUuid, propertyPaths);\r
}\r
\r
- \r
\r
- /** {@inheritDoc} \r
+\r
+ /** {@inheritDoc}\r
* @throws ReferencedObjectUndeletableException */\r
- public boolean delete(TaxonBase entity) {\r
+ @Override\r
+ public boolean delete(TaxonBase entity) {\r
return CdmStore.getService(ITaxonService.class).delete(entity) != null;\r
}\r
@Override\r
return new TaxonCreator();\r
}\r
\r
+\r
+ /* (non-Javadoc)\r
+ * @see eu.etaxonomy.taxeditor.editor.CdmEntitySessionInput#merge()\r
+ */\r
+ @Override\r
+ public void merge() {\r
+\r
+ }\r
+\r
}\r
// $Id$
/**
* Copyright (C) 2007 EDIT
-* European Distributed Institute of Taxonomy
+* European Distributed Institute of Taxonomy
* http://www.e-taxonomy.eu
-*
+*
* The contents of this file are subject to the Mozilla Public License Version 1.1
* See LICENSE.TXT at the top of this package for the full license terms.
*/
package eu.etaxonomy.taxeditor.bulkeditor.input;
-import java.util.Arrays;
import java.util.List;
-import java.util.UUID;
import eu.etaxonomy.cdm.api.service.IUserService;
import eu.etaxonomy.cdm.api.service.config.IIdentifiableEntityServiceConfigurator;
public class UserEditorInput extends AbstractBulkEditorInput<User> {
public static final String ID = "bulkeditor.input.user";
-
+
private static UserEditorInput instance;
-
+
/**
* @return the instance
*/
}
return instance;
}
-
+
/* (non-Javadoc)
* @see org.eclipse.ui.IEditorInput#getName()
*/
* @see eu.etaxonomy.taxeditor.annotatedlineeditor.IEntityPersistenceService#save(java.lang.Object)
*/
@Override
- public boolean save(User entity) {
- return CdmStore.getService(IUserService.class).saveOrUpdate(entity) != null;
+ public User save(User entity) {
+ if(CdmStore.getCurrentSessionManager().isRemoting()) {
+ return CdmStore.getService(IUserService.class).merge(entity, true).getMergedEntity();
+ } else {
+ CdmStore.getService(IUserService.class).saveOrUpdate(entity);
+ return entity;
+ }
+
}
/* (non-Javadoc)
return CdmStore.getSearchManager().findUsers(configurator);
}
-
+
/* (non-Javadoc)
* @see eu.etaxonomy.taxeditor.bulkeditor.input.AbstractBulkEditorInput#loadEntity(java.util.UUID)
-
+
@Override
protected User loadEntity(UUID entityUuid) {
- List<String> propertyPaths = Arrays.asList(new String[]{});
+ List<String> propertyPaths = Arrays.asList(new String[]{});
return CdmStore.getService(IUserService.class).load(entityUuid, propertyPaths);
}
*/
protected IEntityCreator<User> createEntityCreator() {
return new UserCreator();
}
-
+
/* (non-Javadoc)
* @see eu.etaxonomy.taxeditor.bulkeditor.input.AbstractBulkEditorInput#getText(eu.etaxonomy.cdm.model.common.ICdmBase)
*/
return String.format("%s, %s", entity.getUsername(), entity.getPerson());
}
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.editor.CdmEntitySessionInput#merge()
+ */
+ @Override
+ public void merge() {
+
+ }
+
}
// $Id$
/**
* Copyright (C) 2007 EDIT
-* European Distributed Institute of Taxonomy
+* European Distributed Institute of Taxonomy
* http://www.e-taxonomy.eu
-*
+*
* The contents of this file are subject to the Mozilla Public License Version 1.1
* See LICENSE.TXT at the top of this package for the full license terms.
*/
public User createEntity(Object key, String text) {
try{
User user = User.NewInstance(text, text);
- CdmStore.getService(IUserService.class).createUser(user);
+ if(CdmStore.getCurrentSessionManager().isRemoting()) {
+ CdmStore.getService(IUserService.class).createUser(user);
+ user = CdmStore.getService(IUserService.class).loadWithUpdate(user.getUuid());
+ } else {
+ CdmStore.getService(IUserService.class).createUser(user);
+ }
return user;
} catch (AccessDeniedException e){
MessagingUtils.messageDialog("Access denied", getClass(), e.getMessage(), e);
import eu.etaxonomy.taxeditor.bulkeditor.BulkEditor;
import eu.etaxonomy.taxeditor.model.DescriptionHelper;
import eu.etaxonomy.taxeditor.model.LineSelection;
+import eu.etaxonomy.taxeditor.session.ICdmEntitySession;
import eu.etaxonomy.taxeditor.store.CdmStore;
import eu.etaxonomy.taxeditor.view.AbstractCdmViewPart;
* @created 08.07.2009
* @version 1.0
*/
-public class ReferencingObjectsView extends AbstractCdmViewPart{
+public class ReferencingObjectsView extends AbstractCdmViewPart {
private static final Logger logger = Logger
.getLogger(ReferencingObjectsView.class);
private String referencedObjectTitleCache;
private ConversationHolder conversation;
+ private ICdmEntitySession cdmEntitySession;
+
+ public ReferencingObjectsView() {
+ cdmEntitySession = CdmStore.getCurrentSessionManager().newSession(this, true);
+ }
/* (non-Javadoc)
* @see eu.etaxonomy.taxeditor.model.AbstractCdmViewPart#createViewer(org.eclipse.swt.widgets.Composite)
viewer.setColumnProperties(titles);
}
+ @Override
+ public void setFocus() {
+ cdmEntitySession.bind();
+ }
/**
* <p>updateReferencingObjects</p>
*
@Override
public void run() {
if (entityUUID != null){
-
+ ICdmEntitySession previousCdmEntitySession = CdmStore.getCurrentSessionManager().getActiveSession();
+ cdmEntitySession.bind();
List<CdmBase> referencingObjects = getReferencingObjects(entityUUID, objectClass);
-
+ if(previousCdmEntitySession != null) {
+ previousCdmEntitySession.bind();
+ }
updateView(referencingObjects);
}
}
} catch (Exception e) {
logger.error("Error retrieving referencing objects", e);
+ setContentDescription("The referencing objects view could not be loaded completely. Some Problems occured.");
}
return null;
}
conversation.close();
selectionService.removePostSelectionListener(this);
selectionService.removeSelectionListener(this);
+ cdmEntitySession.dispose();
super.dispose();
}
}
-
}
-<?xml version="1.0" encoding="UTF-8"?>\r
-<classpath>\r
- <classpathentry exported="true" kind="lib" path="lib/cdmlib-commons-3.8.0.jar"/>\r
- <classpathentry exported="true" kind="lib" path="lib/cdmlib-ext-3.8.0.jar"/>\r
- <classpathentry exported="true" kind="lib" path="lib/cdmlib-io-3.8.0.jar"/>\r
- <classpathentry exported="true" kind="lib" path="lib/cdmlib-model-3.8.0.jar"/>\r
- <classpathentry exported="true" kind="lib" path="lib/cdmlib-persistence-3.8.0.jar"/>\r
- <classpathentry exported="true" kind="lib" path="lib/cdmlib-print-3.8.0.jar"/>\r
- <classpathentry exported="true" kind="lib" path="lib/cdmlib-remote-3.8.0.jar"/>\r
- <classpathentry exported="true" kind="lib" path="lib/cdmlib-services-3.8.0.jar" sourcepath="lib/cdmlib-services-3.8.0-sources.jar"/>\r
- <classpathentry kind="con" path="org.eclipse.jdt.launching.JRE_CONTAINER/org.eclipse.jdt.internal.debug.ui.launcher.StandardVMType/JavaSE-1.6"/>\r
- <classpathentry kind="con" path="org.eclipse.pde.core.requiredPlugins"/>\r
- <classpathentry kind="src" path="src/main/java"/>\r
- <classpathentry kind="src" path="src/main/resources"/>\r
- <classpathentry exported="true" kind="lib" path="lib/activation-1.1.1.jar"/>\r
- <classpathentry exported="true" kind="lib" path="lib/antlr-2.7.7.jar"/>\r
- <classpathentry exported="true" kind="lib" path="lib/aopalliance-1.0.jar"/>\r
- <classpathentry exported="true" kind="lib" path="lib/aspectjrt-1.7.1.jar"/>\r
- <classpathentry exported="true" kind="lib" path="lib/aspectjweaver-1.7.1.jar"/>\r
- <classpathentry exported="true" kind="lib" path="lib/avro-1.6.3.jar"/>\r
- <classpathentry exported="true" kind="lib" path="lib/batik-anim-1.7.jar"/>\r
- <classpathentry exported="true" kind="lib" path="lib/batik-awt-util-1.7.jar"/>\r
- <classpathentry exported="true" kind="lib" path="lib/batik-bridge-1.7.jar"/>\r
- <classpathentry exported="true" kind="lib" path="lib/batik-css-1.7.jar"/>\r
- <classpathentry exported="true" kind="lib" path="lib/batik-dom-1.7.jar"/>\r
- <classpathentry exported="true" kind="lib" path="lib/batik-ext-1.7.jar"/>\r
- <classpathentry exported="true" kind="lib" path="lib/batik-extension-1.7.jar"/>\r
- <classpathentry exported="true" kind="lib" path="lib/batik-gvt-1.7.jar"/>\r
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+ <classpathentry kind="output" path="target/classes"/>
+</classpath>
+
-bin
\ No newline at end of file
+bin
+/target/
+/target/
+/target/
+/target/
Bundle-ManifestVersion: 2
Bundle-Name: CDM Library Dependencies Plugin
Bundle-SymbolicName: eu.etaxonomy.taxeditor.cdmlib;singleton:=true
-Bundle-Version: 3.8.1
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Eclipse-BundleShape: dir
Export-Package: com.google.api,
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eu.etaxonomy.cdm.io.sdd.ikeyplus,
eu.etaxonomy.cdm.io.sdd.in,
eu.etaxonomy.cdm.io.sdd.out,
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eu.etaxonomy.cdm.io.specimen,
eu.etaxonomy.cdm.io.specimen.abcd206.in,
eu.etaxonomy.cdm.io.specimen.excel.in,
eu.etaxonomy.cdm.persistence.dao.hibernate.occurrence,
eu.etaxonomy.cdm.persistence.dao.hibernate.reference,
eu.etaxonomy.cdm.persistence.dao.hibernate.taxon,
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eu.etaxonomy.cdm.persistence.dao.hibernate.view,
eu.etaxonomy.cdm.persistence.dao.media,
eu.etaxonomy.cdm.persistence.dao.name,
eu.etaxonomy.cdm.print.out.pdf,
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eu.etaxonomy.cdm.print.out.xml,
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eu.etaxonomy.cdm.remote.config,
eu.etaxonomy.cdm.remote.controller,
eu.etaxonomy.cdm.remote.controller.dto,
eu.etaxonomy.cdm.validation.annotation,
eu.etaxonomy.cdm.validation.constraint,
eu.etaxonomy.remote.dto.rdf,
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org.jadira.usertype.dateandtime.shared.spi,
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org.odftoolkit.odfdom.dom.element,
org.odftoolkit.odfdom.dom.element.style,
org.odftoolkit.odfdom.dom.style,
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org.springframework.beans.factory.wiring,
org.springframework.core.type,
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org.springframework.core.io.support,
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org.springframework.security.access,
org.springframework.security.authentication,
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org.springframework.security.authentication.event,
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org.springframework.security.core.userdetails,
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org.apache.commons.logging,
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Bundle-Vendor: EDIT
Bundle-RequiredExecutionEnvironment: JavaSE-1.6
Require-Bundle: org.eclipse.osgi,
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+ lib/cdmlib-services-3.12.0-SNAPSHOT.jar
Import-Package: eu.etaxonomy.cdm.api.application
lib/spring-security-core-3.1.3.RELEASE.jar,\\r
lib/stax-1.2.0.jar,\\r
lib/stax-api-1.0.1.jar,\\r
- lib/unitils-core-3.3.jar,\\r
- lib/unitils-database-3.3.jar,\\r
- lib/unitils-dbmaintainer-3.3.jar,\\r
- lib/unitils-dbunit-3.3.jar,\\r
- lib/unitils-easymock-3.3.jar,\\r
- lib/unitils-inject-3.3.jar,\\r
- lib/unitils-mock-3.3.jar,\\r
- lib/unitils-orm-3.3.jar,\\r
- lib/unitils-spring-3.3.jar,\\r
lib/usertype.jodatime-2.0.1.jar,\\r
lib/usertype.spi-2.0.1.jar,\\r
lib/validation-api-1.0.0.GA.jar,\\r
lib/poi-ooxml-schemas-3.10-FINAL.jar,\\r
lib/xmlbeans-2.3.0.jar,\\r
lib/swagger-annotations-1.3.5.jar,\\r
- lib/cdmlib-commons-3.8.0.jar,\\r
- lib/cdmlib-ext-3.8.0.jar,\\r
- lib/cdmlib-io-3.8.0.jar,\\r
- lib/cdmlib-model-3.8.0.jar,\\r
- lib/cdmlib-persistence-3.8.0.jar,\\r
- lib/cdmlib-print-3.8.0.jar,\\r
- lib/cdmlib-remote-3.8.0.jar,\\r
- lib/cdmlib-services-3.8.0.jar\r
+ lib/cdmlib-commons-3.12.0-SNAPSHOT.jar,\\r
+ lib/cdmlib-ext-3.12.0-SNAPSHOT.jar,\\r
+ lib/cdmlib-io-3.12.0-SNAPSHOT.jar,\\r
+ lib/cdmlib-model-3.12.0-SNAPSHOT.jar,\\r
+ lib/cdmlib-persistence-3.12.0-SNAPSHOT.jar,\\r
+ lib/cdmlib-print-3.12.0-SNAPSHOT.jar,\\r
+ lib/cdmlib-remote-3.12.0-SNAPSHOT.jar,\\r
+ lib/cdmlib-services-3.12.0-SNAPSHOT.jar,\\r
+ lib/apache-log4j-extras-1.2.17.jar,\\r
+ resources/cdm.map.ser\r
\r
jars.compile.order = .\r
output.. = bin/\r
source.. = src/main/java/,\\r
- src/main/resources/,\\r
- src/test/java/\r
+ src/main/resources/\r
src.includes = src/\r
\r
-<?xml version="1.0" encoding="UTF-8"?>
-<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/maven-v4_0_0.xsd">
- <parent>
- <groupId>eu.etaxonomy</groupId>
- <artifactId>taxeditor-parent</artifactId>
- <version>3.8.1</version>
- </parent>
- <modelVersion>4.0.0</modelVersion>
- <artifactId>eu.etaxonomy.taxeditor.cdmlib</artifactId>
- <packaging>eclipse-plugin</packaging>
- <name>CDM Library Dependencies Plugin</name>
- <description>CDM Library and dependencies as a plugin</description>
- <build>
- <plugins>
- <plugin>
- <groupId>org.apache.maven.plugins</groupId>
- <artifactId>maven-dependency-plugin</artifactId>
- <version>2.4</version>
- <executions>
- <execution>
- <id>copy-dependencies</id>
- <phase>validate</phase>
- <goals>
- <goal>copy-dependencies</goal>
- </goals>
- <configuration>
- <includeArtifactIds>cdmlib-commons,cdmlib-model,cdmlib-persistence,cdmlib-remote,cdmlib-print,cdmlib-services,cdmlib-ext,cdmlib-io</includeArtifactIds>
- <outputDirectory>lib</outputDirectory>
- <overWriteReleases>true</overWriteReleases>
- <overWriteSnapshots>true</overWriteSnapshots>
- <excludeTransitive>true</excludeTransitive>
- </configuration>
- </execution>
- <execution>
- <id>copy-dependencies-sources</id>
- <phase>validate</phase>
- <goals>
- <goal>copy-dependencies</goal>
- </goals>
- <configuration>
- <classifier>sources</classifier>
- <includeArtifactIds>cdmlib-commons,cdmlib-model,cdmlib-persistence,cdmlib-remote,cdmlib-print,cdmlib-services,cdmlib-ext,cdmlib-io</includeArtifactIds>
- <outputDirectory>lib</outputDirectory>
- <overWriteReleases>true</overWriteReleases>
- <overWriteSnapshots>true</overWriteSnapshots>
- <excludeTransitive>true</excludeTransitive>
- <failOnMissingClassifierArtifact>false</failOnMissingClassifierArtifact>
- </configuration>
- </execution>
- </executions>
- </plugin>
- <plugin>
- <groupId>org.apache.maven.plugins</groupId>
- <artifactId>maven-antrun-plugin</artifactId>
- <version>1.7</version>
- <executions>
- <execution>
- <id>remove-existing-jars</id>
- <phase>clean</phase>
- <goals>
- <goal>run</goal>
- </goals>
- <configuration>
- <target>
- <echo>Remove all cdmlib jars</echo>
- <delete>
- <fileset dir="./lib" includes="cdmlib-*" />
- </delete>
- </target>
- </configuration>
- </execution>
- <execution>
- <id>update-snapshot-jar-names</id>
- <phase>validate</phase>
- <goals>
- <goal>run</goal>
- </goals>
- <configuration>
- <target>
- <echo>Update cdmlib jars to SNAPSHOT when build with timestamp</echo>
- <move todir="./lib">
- <fileset dir="./lib" />
- <mapper type="regexp" from="(^cdmlib\-.*\-[0-9]\.[0-9]\.[0-9]\-)[0-9.-]+(\.jar)" to="\1SNAPSHOT\2" />
- </move>
- <move todir="./lib">
- <fileset dir="./lib" />
- <mapper type="regexp" from="(^cdmlib\-.*\-[0-9]\.[0-9]\.[0-9]\-)[0-9.-]+(\-sources\.jar)" to="\1SNAPSHOT\2" />
- </move>
- </target>
- </configuration>
- </execution>
- </executions>
- </plugin>
- </plugins>
- </build>
- <dependencies>
- <dependency>
- <groupId>identificationKeyAPI</groupId>
- <artifactId>identificationKeyAPI</artifactId>
- <version>1.0-SNAPSHOT</version>
- </dependency>
- <dependency>
- <groupId>eu.etaxonomy</groupId>
- <artifactId>cdmlib-commons</artifactId>
- <version>${cdmlib.version}</version>
- </dependency>
- <dependency>
- <groupId>eu.etaxonomy</groupId>
- <artifactId>cdmlib-model</artifactId>
- <version>${cdmlib.version}</version>
- </dependency>
- <dependency>
- <groupId>eu.etaxonomy</groupId>
- <artifactId>cdmlib-persistence</artifactId>
- <version>${cdmlib.version}</version>
- </dependency>
- <dependency>
- <groupId>eu.etaxonomy</groupId>
- <artifactId>cdmlib-remote</artifactId>
- <version>${cdmlib.version}</version>
- </dependency>
- <dependency>
- <groupId>eu.etaxonomy</groupId>
- <artifactId>cdmlib-print</artifactId>
- <version>${cdmlib.version}</version>
- </dependency>
- <dependency>
- <groupId>eu.etaxonomy</groupId>
- <artifactId>cdmlib-services</artifactId>
- <version>${cdmlib.version}</version>
- </dependency>
- <dependency>
- <groupId>eu.etaxonomy</groupId>
- <artifactId>cdmlib-io</artifactId>
- <version>${cdmlib.version}</version>
- </dependency>
- <dependency>
- <groupId>eu.etaxonomy</groupId>
- <artifactId>cdmlib-ext</artifactId>
- <version>${cdmlib.version}</version>
- </dependency>
- <dependency>
- <groupId>org.aspectj</groupId>
- <artifactId>aspectjrt</artifactId>
- <version>1.7.1</version>
- </dependency>
- <dependency>
- <groupId>org.aspectj</groupId>
- <artifactId>aspectjweaver</artifactId>
- <version>1.7.1</version>
- </dependency>
-
- <!-- for ikey-plus
- TODO this should not be needed but the utils class contained in this jar
- seems to be loaded as bean by spring
- -->
- </dependencies>
-</project>
+<?xml version="1.0" encoding="UTF-8"?>\r
+<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"\r
+ xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/maven-v4_0_0.xsd">\r
+ <parent>\r
+ <groupId>eu.etaxonomy</groupId>\r
+ <artifactId>taxeditor-parent</artifactId>\r
+ <version>3.12.0-SNAPSHOT</version>\r
+ </parent>\r
+ <modelVersion>4.0.0</modelVersion>\r
+ <artifactId>eu.etaxonomy.taxeditor.cdmlib</artifactId>\r
+ <packaging>eclipse-plugin</packaging>\r
+ <name>CDM Library Dependencies Plugin</name>\r
+ <description>CDM Library and dependencies as a plugin</description>\r
+\r
+ <build>\r
+ <pluginManagement>\r
+ <plugins>\r
+ <plugin>\r
+ <groupId>org.apache.maven.plugins</groupId>\r
+ <artifactId>maven-surefire-plugin</artifactId>\r
+ <version>2.7</version>\r
+ </plugin>\r
+ </plugins>\r
+ </pluginManagement>\r
+ <plugins>\r
+ <plugin>\r
+ <groupId>org.apache.maven.plugins</groupId>\r
+ <artifactId>maven-dependency-plugin</artifactId>\r
+ <version>2.4</version>\r
+ <executions>\r
+ <execution>\r
+ <id>copy-dependencies</id>\r
+ <phase>validate</phase>\r
+ <goals>\r
+ <goal>copy-dependencies</goal>\r
+ </goals>\r
+ <configuration>\r
+ <excludeArtifactIds>\r
+ cdmlib-remote-webapp\r
+ </excludeArtifactIds>\r
+ <includeArtifactIds>\r
+ cdmlib-services,cdmlib-commons,cdmlib-persistence,cdmlib-ext,cdmlib-model,cdmlib-io,cdmlib-print,cdmlib-remote\r
+ </includeArtifactIds>\r
+ <outputDirectory>${basedir}/lib</outputDirectory>\r
+ <overWriteReleases>true</overWriteReleases>\r
+ <overWriteSnapshots>true</overWriteSnapshots>\r
+ <excludeTransitive>true</excludeTransitive>\r
+ </configuration>\r
+ </execution>\r
+ <execution>\r
+ <id>copy-dependency-war</id>\r
+ <phase>validate</phase>\r
+ <goals>\r
+ <goal>copy-dependencies</goal>\r
+ </goals>\r
+ <configuration>\r
+ <includeArtifactIds>\r
+ cdmlib-remote-webapp\r
+ </includeArtifactIds>\r
+ <outputDirectory>\r
+ ${basedir}/src/main/resources/etc/jetty\r
+ </outputDirectory>\r
+ <overWriteReleases>true</overWriteReleases>\r
+ <overWriteSnapshots>true</overWriteSnapshots>\r
+ <excludeTransitive>true</excludeTransitive>\r
+ </configuration>\r
+ </execution>\r
+ </executions>\r
+ </plugin>\r
+ <plugin>\r
+ <groupId>org.apache.maven.plugins</groupId>\r
+ <artifactId>maven-antrun-plugin</artifactId>\r
+ <version>1.7</version>\r
+ <executions>\r
+ <execution>\r
+ <id>update-snapshot-jar-names</id>\r
+ <phase>validate</phase>\r
+ <goals>\r
+ <goal>run</goal>\r
+ </goals>\r
+ <configuration>\r
+ <target>\r
+ <echo>Anonymizing war</echo>\r
+ <move todir="./src/main/resources/etc/jetty">\r
+ <fileset dir="./src/main/resources/etc/jetty" />\r
+ <mapper type="regexp"\r
+ from="(^cdmlib\-remote\-webapp).*(\.war)" to="\1\2" />\r
+ </move>\r
+ <echo>Update cdmlib jars to SNAPSHOT when build with\r
+ timestamp\r
+ </echo>\r
+ <move todir="./lib">\r
+ <fileset dir="./lib" />\r
+ <mapper type="regexp"\r
+ from="(^cdmlib\-.*\-\d+\.\d+\.\d+\-)[\d.-]+(\.jar)"\r
+ to="\1SNAPSHOT\2" />\r
+ </move>\r
+ <move todir="./lib">\r
+ <fileset dir="./lib" />\r
+ <mapper type="regexp"\r
+ from="(^cdmlib\-.*\-\d+\.\d+\.\d+\-)[\d.-]+(\-sources\.jar)"\r
+ to="\1SNAPSHOT\2" />\r
+ </move>\r
+ </target>\r
+ </configuration>\r
+ </execution>\r
+ <execution>\r
+ <id>remove-existing-jars</id>\r
+ <phase>clean</phase>\r
+ <goals>\r
+ <goal>run</goal>\r
+ </goals>\r
+ <configuration>\r
+ <target>\r
+ <echo>Remove all cdmlib jars</echo>\r
+ <delete>\r
+ <fileset dir="./lib" includes="cdmlib-*" />\r
+ </delete>\r
+ </target>\r
+ </configuration>\r
+ </execution>\r
+ </executions>\r
+ </plugin>\r
+ </plugins>\r
+ </build>\r
+ <profiles>\r
+ <profile>\r
+ <id>copyAllJars</id>\r
+ <build>\r
+ <plugins>\r
+ <plugin>\r
+ <groupId>org.apache.maven.plugins</groupId>\r
+ <artifactId>maven-dependency-plugin</artifactId>\r
+ <version>2.4</version>\r
+ <executions>\r
+ <execution>\r
+ <id>copy-all-dependencies</id>\r
+ <phase>validate</phase>\r
+ <goals>\r
+ <goal>copy-dependencies</goal>\r
+ </goals>\r
+ <configuration>\r
+ <excludeArtifactIds>\r
+ cdmlib-remote-webapp\r
+ </excludeArtifactIds>\r
+ <outputDirectory>${basedir}/lib</outputDirectory>\r
+ <overWriteReleases>true</overWriteReleases>\r
+ <overWriteSnapshots>true</overWriteSnapshots>\r
+ <excludeTransitive>true</excludeTransitive>\r
+ </configuration>\r
+ </execution>\r
+ </executions>\r
+ </plugin>\r
+ </plugins>\r
+ </build>\r
+ </profile>\r
+ </profiles>\r
+ <repositories>\r
+ <repository>\r
+ <id>SpringSource Enterprise Bundle Repository - External Bundle\r
+ Milestones\r
+ </id>\r
+ <url>http://repository.springsource.com/maven/bundles/milestone\r
+ </url>\r
+ </repository>\r
+ <repository>\r
+ <id>SpringSource Enterprise Bundle Repository - SpringSource\r
+ Bundle\r
+ Releases\r
+ </id>\r
+ <url>http://repository.springsource.com/maven/bundles/release\r
+ </url>\r
+ </repository>\r
+ <repository>\r
+ <id>SpringSource Enterprise Bundle Repository - External Bundle\r
+ Releases\r
+ </id>\r
+ <url>http://repository.springsource.com/maven/bundles/external\r
+ </url>\r
+ </repository>\r
+ </repositories>\r
+ <dependencies>\r
+ <dependency>\r
+ <groupId>eu.etaxonomy</groupId>\r
+ <artifactId>cdmlib-remote-webapp</artifactId>\r
+ <version>${cdmlib.version}</version>\r
+ <type>war</type>\r
+ </dependency>\r
+ <dependency>\r
+ <groupId>eu.etaxonomy</groupId>\r
+ <artifactId>cdmlib-commons</artifactId>\r
+ <version>${cdmlib.version}</version>\r
+ </dependency>\r
+ <dependency>\r
+ <groupId>eu.etaxonomy</groupId>\r
+ <artifactId>cdmlib-model</artifactId>\r
+ <version>${cdmlib.version}</version>\r
+ </dependency>\r
+ <dependency>\r
+ <groupId>eu.etaxonomy</groupId>\r
+ <artifactId>cdmlib-persistence</artifactId>\r
+ <version>${cdmlib.version}</version>\r
+ </dependency>\r
+ <dependency>\r
+ <groupId>eu.etaxonomy</groupId>\r
+ <artifactId>cdmlib-remote</artifactId>\r
+ <version>${cdmlib.version}</version>\r
+ </dependency>\r
+ <dependency>\r
+ <groupId>eu.etaxonomy</groupId>\r
+ <artifactId>cdmlib-print</artifactId>\r
+ <version>${cdmlib.version}</version>\r
+ </dependency>\r
+ <dependency>\r
+ <groupId>eu.etaxonomy</groupId>\r
+ <artifactId>cdmlib-services</artifactId>\r
+ <version>${cdmlib.version}</version>\r
+ </dependency>\r
+ <dependency>\r
+ <groupId>eu.etaxonomy</groupId>\r
+ <artifactId>cdmlib-io</artifactId>\r
+ <version>${cdmlib.version}</version>\r
+ </dependency>\r
+ <dependency>\r
+ <groupId>eu.etaxonomy</groupId>\r
+ <artifactId>cdmlib-ext</artifactId>\r
+ <version>${cdmlib.version}</version>\r
+ </dependency>\r
+\r
+ <!-- <dependency> -->\r
+ <!-- <groupId>org.eclipse.jetty</groupId> -->\r
+ <!-- <artifactId>jetty-server</artifactId> -->\r
+ <!-- <version>9.1.3.v20140225</version> -->\r
+ <!-- </dependency> -->\r
+ <!-- <dependency> -->\r
+ <!-- <groupId>org.eclipse.jetty</groupId> -->\r
+ <!-- <artifactId>jetty-util</artifactId> -->\r
+ <!-- <version>9.1.3.v20140225</version> -->\r
+ <!-- </dependency> -->\r
+ <!-- <dependency> -->\r
+ <!-- <groupId>org.eclipse.jetty</groupId> -->\r
+ <!-- <artifactId>jetty-xml</artifactId> -->\r
+ <!-- <version>9.1.3.v20140225</version> -->\r
+ <!-- </dependency> -->\r
+ <!-- <dependency> -->\r
+ <!-- <groupId>org.eclipse.jetty</groupId> -->\r
+ <!-- <artifactId>jetty-servlet</artifactId> -->\r
+ <!-- <version>9.1.3.v20140225</version> -->\r
+ <!-- </dependency> -->\r
+ <!-- <dependency> -->\r
+ <!-- <groupId>org.eclipse.jetty</groupId> -->\r
+ <!-- <artifactId>jetty-webapp</artifactId> -->\r
+ <!-- <version>9.1.3.v20140225</version> -->\r
+ <!-- </dependency> -->\r
+ <!-- <dependency> -->\r
+ <!-- <groupId>org.eclipse.jetty</groupId> -->\r
+ <!-- <artifactId>jetty-security</artifactId> -->\r
+ <!-- <version>9.1.3.v20140225</version> -->\r
+ <!-- </dependency> -->\r
+ <!-- <dependency> -->\r
+ <!-- <groupId>org.eclipse.jetty</groupId> -->\r
+ <!-- <artifactId>jetty-http</artifactId> -->\r
+ <!-- <version>${jetty.version}</version> -->\r
+ <!-- </dependency> -->\r
+ <!-- <dependency> -->\r
+ <!-- <groupId>org.eclipse.jetty</groupId> -->\r
+ <!-- <artifactId>jetty-io</artifactId> -->\r
+ <!-- <version>${jetty.version}</version> -->\r
+ <!-- </dependency> -->\r
+ <!-- <dependency> -->\r
+ <!-- <groupId>javax.servlet</groupId> -->\r
+ <!-- <artifactId>javax.servlet-api</artifactId> -->\r
+ <!-- <version>3.1.0</version> -->\r
+ <!-- </dependency> -->\r
+\r
+ <!-- <dependency> -->\r
+ <!-- <groupId>javax.servlet</groupId> -->\r
+ <!-- <artifactId>jsp-api</artifactId> -->\r
+ <!-- <version>2.0</version> -->\r
+ <!-- </dependency> -->\r
+\r
+ <dependency>\r
+ <groupId>net.sf.ehcache</groupId>\r
+ <artifactId>ehcache-core</artifactId>\r
+ <version>2.4.3</version>\r
+ </dependency>\r
+ <dependency>\r
+ <groupId>org.hibernate</groupId>\r
+ <artifactId>hibernate-core</artifactId>\r
+ <version>4.1.10.Final</version>\r
+ </dependency>\r
+ <dependency>\r
+ <groupId>org.hibernate.common</groupId>\r
+ <artifactId>hibernate-commons-annotations</artifactId>\r
+ <version>4.0.1.Final</version>\r
+ </dependency>\r
+ <dependency>\r
+ <groupId>org.hibernate</groupId>\r
+ <artifactId>hibernate-search-engine</artifactId>\r
+ <version>4.2.0.Final</version>\r
+ </dependency>\r
+ <dependency>\r
+ <groupId>org.hibernate.javax.persistence</groupId>\r
+ <artifactId>hibernate-jpa-2.0-api</artifactId>\r
+ <version>1.0.1.Final</version>\r
+ </dependency>\r
+ <dependency>\r
+ <groupId>org.hibernate</groupId>\r
+ <artifactId>hibernate-envers</artifactId>\r
+ <version>4.1.10.Final</version>\r
+ </dependency>\r
+ <dependency>\r
+ <groupId>org.hibernate</groupId>\r
+ <artifactId>hibernate-entitymanager</artifactId>\r
+ <version>4.1.10.Final</version>\r
+ </dependency>\r
+ <dependency>\r
+ <groupId>dom4j</groupId>\r
+ <artifactId>dom4j</artifactId>\r
+ <version>1.6</version>\r
+ </dependency>\r
+ <dependency>\r
+ <groupId>org.jadira.usertype</groupId>\r
+ <artifactId>usertype.jodatime</artifactId>\r
+ <version>2.0.1</version>\r
+ </dependency>\r
+ <dependency>\r
+ <groupId>org.jadira.usertype</groupId>\r
+ <artifactId>usertype.spi</artifactId>\r
+ <version>2.0.1</version>\r
+ </dependency>\r
+\r
+ <dependency>\r
+ <groupId>junit</groupId>\r
+ <artifactId>junit</artifactId>\r
+ <version>4.11</version>\r
+ <scope>test</scope>\r
+ </dependency>\r
+ <dependency>\r
+ <groupId>log4j</groupId>\r
+ <artifactId>log4j</artifactId>\r
+ <version>1.2.17</version>\r
+ </dependency>\r
+ <dependency>\r
+ <groupId>org.jdom</groupId>\r
+ <artifactId>jdom</artifactId>\r
+ <version>1.1.3</version>\r
+ </dependency>\r
+ <dependency>\r
+ <groupId>org.springframework</groupId>\r
+ <artifactId>org.springframework.context</artifactId>\r
+ <version>3.2.2.RELEASE</version>\r
+ </dependency>\r
+ <dependency>\r
+ <groupId>org.springframework</groupId>\r
+ <artifactId>org.springframework.context.support</artifactId>\r
+ <version>3.2.2.RELEASE</version>\r
+ </dependency>\r
+ <dependency>\r
+ <groupId>org.springframework</groupId>\r
+ <artifactId>org.springframework.aspects</artifactId>\r
+ <version>3.2.2.RELEASE</version>\r
+ </dependency>\r
+ <dependency>\r
+ <groupId>org.springframework</groupId>\r
+ <artifactId>org.springframework.test</artifactId>\r
+ <version>3.2.2.RELEASE</version>\r
+ </dependency>\r
+ <dependency>\r
+ <groupId>org.springframework</groupId>\r
+ <artifactId>org.springframework.beans</artifactId>\r
+ <version>3.2.2.RELEASE</version>\r
+ </dependency>\r
+ <dependency>\r
+ <groupId>org.springframework</groupId>\r
+ <artifactId>org.springframework.transaction</artifactId>\r
+ <version>3.2.2.RELEASE</version>\r
+ </dependency>\r
+ <dependency>\r
+ <groupId>org.springframework</groupId>\r
+ <artifactId>org.springframework.web</artifactId>\r
+ <version>3.2.2.RELEASE</version>\r
+ </dependency>\r
+ <dependency>\r
+ <groupId>org.springframework</groupId>\r
+ <artifactId>org.springframework.core</artifactId>\r
+ <version>3.2.2.RELEASE</version>\r
+ </dependency>\r
+ <dependency>\r
+ <groupId>org.springframework</groupId>\r
+ <artifactId>org.springframework.aop</artifactId>\r
+ <version>3.2.2.RELEASE</version>\r
+ </dependency>\r
+ <dependency>\r
+ <groupId>org.springframework</groupId>\r
+ <artifactId>org.springframework.expression</artifactId>\r
+ <version>3.2.2.RELEASE</version>\r
+ </dependency>\r
+ <dependency>\r
+ <groupId>org.springframework</groupId>\r
+ <artifactId>org.springframework.orm</artifactId>\r
+ <version>3.2.2.RELEASE</version>\r
+ </dependency>\r
+ <dependency>\r
+ <groupId>org.springframework</groupId>\r
+ <artifactId>org.springframework.jdbc</artifactId>\r
+ <version>3.2.2.RELEASE</version>\r
+ </dependency>\r
+ <dependency>\r
+ <groupId>org.springframework.security</groupId>\r
+ <artifactId>spring-security-core</artifactId>\r
+ <version>3.1.3.RELEASE</version>\r
+ </dependency>\r
+ <dependency>\r
+ <groupId>org.springframework.security</groupId>\r
+ <artifactId>spring-security-config</artifactId>\r
+ <version>3.1.3.RELEASE</version>\r
+ </dependency>\r
+ <dependency>\r
+ <groupId>org.springframework.security</groupId>\r
+ <artifactId>spring-security-remoting</artifactId>\r
+ <version>3.1.3.RELEASE</version>\r
+ </dependency>\r
+ <dependency>\r
+ <groupId>org.jboss.logging</groupId>\r
+ <artifactId>jboss-logging</artifactId>\r
+ <version>3.1.3.GA</version>\r
+ </dependency>\r
+ <dependency>\r
+ <groupId>org.hamcrest</groupId>\r
+ <artifactId>hamcrest-core</artifactId>\r
+ <version>1.3</version>\r
+ </dependency>\r
+ <dependency>\r
+ <groupId>com.mchange</groupId>\r
+ <artifactId>c3p0</artifactId>\r
+ <version>0.9.2</version>\r
+ </dependency>\r
+ <dependency>\r
+ <groupId>org.jboss.spec.javax.transaction</groupId>\r
+ <artifactId>jboss-transaction-api_1.1_spec</artifactId>\r
+ <version>1.0.0.Final</version>\r
+ </dependency>\r
+ <dependency>\r
+ <groupId>org.aspectj</groupId>\r
+ <artifactId>aspectjrt</artifactId>\r
+ <version>1.7.1</version>\r
+ </dependency>\r
+ <dependency>\r
+ <groupId>commons-logging</groupId>\r
+ <artifactId>commons-logging</artifactId>\r
+ <version>1.1.1</version>\r
+ </dependency>\r
+ <dependency>\r
+ <groupId>commons-lang</groupId>\r
+ <artifactId>commons-lang</artifactId>\r
+ <version>2.6</version>\r
+ </dependency>\r
+ <dependency>\r
+ <groupId>aopalliance</groupId>\r
+ <artifactId>aopalliance</artifactId>\r
+ <version>1.0</version>\r
+ </dependency>\r
+ <dependency>\r
+ <groupId>joda-time</groupId>\r
+ <artifactId>joda-time</artifactId>\r
+ <version>2.1</version>\r
+ </dependency>\r
+ <dependency>\r
+ <groupId>com.ibm.lsid</groupId>\r
+ <artifactId>lsid-client</artifactId>\r
+ <version>1.1.2</version>\r
+ </dependency>\r
+ <dependency>\r
+ <groupId>com.ibm.lsid</groupId>\r
+ <artifactId>lsid-server</artifactId>\r
+ <version>1.1.2</version>\r
+ </dependency>\r
+ <dependency>\r
+ <groupId>org.apache.lucene</groupId>\r
+ <artifactId>lucene-core</artifactId>\r
+ <version>3.6.2</version>\r
+ </dependency>\r
+ <dependency>\r
+ <groupId>org.slf4j</groupId>\r
+ <artifactId>slf4j-api</artifactId>\r
+ <version>1.7.2</version>\r
+ </dependency>\r
+ <dependency>\r
+ <groupId>org.javassist</groupId>\r
+ <artifactId>javassist</artifactId>\r
+ <version>3.17.1-GA</version>\r
+ </dependency>\r
+ <dependency>\r
+ <groupId>au.com.bytecode</groupId>\r
+ <artifactId>opencsv</artifactId>\r
+ <version>2.4</version>\r
+ </dependency>\r
+\r
+ <!-- For Unit Tests Start -->\r
+\r
+ <dependency>\r
+ <groupId>org.unitils</groupId>\r
+ <artifactId>unitils-core</artifactId>\r
+ <version>3.4.2</version>\r
+ </dependency>\r
+ <dependency>\r
+ <groupId>org.unitils</groupId>\r
+ <artifactId>unitils-spring</artifactId>\r
+ <version>3.4.2</version>\r
+ </dependency>\r
+ <dependency>\r
+ <groupId>org.unitils</groupId>\r
+ <artifactId>unitils-database</artifactId>\r
+ <version>3.4.2</version>\r
+ </dependency>\r
+ <dependency>\r
+ <groupId>commons-dbcp</groupId>\r
+ <artifactId>commons-dbcp</artifactId>\r
+ <version>1.4</version>\r
+ </dependency>\r
+ <dependency>\r
+ <groupId>commons-pool</groupId>\r
+ <artifactId>commons-pool</artifactId>\r
+ <version>1.5.4</version>\r
+ </dependency>\r
+ <dependency>\r
+ <groupId>org.unitils</groupId>\r
+ <artifactId>unitils-dbmaintainer</artifactId>\r
+ <version>3.4.2</version>\r
+ </dependency>\r
+ <dependency>\r
+ <groupId>com.h2database</groupId>\r
+ <artifactId>h2</artifactId>\r
+ <version>1.4.181</version>\r
+ </dependency>\r
+ <dependency>\r
+ <groupId>org.unitils</groupId>\r
+ <artifactId>unitils-dbunit</artifactId>\r
+ <version>3.4.2</version>\r
+ </dependency>\r
+ <dependency>\r
+ <groupId>org.dbunit</groupId>\r
+ <artifactId>dbunit</artifactId>\r
+ <version>2.4.9</version>\r
+ </dependency>\r
+ <!-- For Unit Tests End -->\r
+\r
+ <!-- For Hibernate Mapping Start -->\r
+ <dependency>\r
+ <groupId>wsdl4j</groupId>\r
+ <artifactId>wsdl4j</artifactId>\r
+ <version>1.6.3</version>\r
+ </dependency>\r
+ <dependency>\r
+ <groupId>javax.validation</groupId>\r
+ <artifactId>validation-api</artifactId>\r
+ <version>1.1.0.Final</version>\r
+ </dependency>\r
+ <!-- For Hibernate Mapping End -->\r
+\r
+ </dependencies>\r
+</project>\r
+
--- /dev/null
+// $Id$
+/**
+* Copyright (C) 2015 EDIT
+* European Distributed Institute of Taxonomy
+* http://www.e-taxonomy.eu
+*
+* The contents of this file are subject to the Mozilla Public License Version 1.1
+* See LICENSE.TXT at the top of this package for the full license terms.
+*/
+package eu.etaxonomy.cdm.api.application;
+
+/**
+ * @author cmathew
+ * @date 18 Jun 2015
+ *
+ */
+public class CdmApplicationException extends Exception {
+
+ public CdmApplicationException(Exception ex) {
+ super(ex);
+ }
+
+}
/**\r
-* Copyright (C) 2014 EDIT\r
-* European Distributed Institute of Taxonomy \r
-* http://www.e-taxonomy.eu\r
-* \r
-* The contents of this file are subject to the Mozilla Public License Version 1.1\r
-* See LICENSE.TXT at the top of this package for the full license terms.\r
-*/\r
+ * Copyright (C) 2014 EDIT\r
+ * European Distributed Institute of Taxonomy\r
+ * http://www.e-taxonomy.eu\r
+ *\r
+ * The contents of this file are subject to the Mozilla Public License Version 1.1\r
+ * See LICENSE.TXT at the top of this package for the full license terms.\r
+ */\r
\r
package eu.etaxonomy.cdm.api.application;\r
\r
-import javax.sql.DataSource;\r
-\r
-import org.hibernate.SessionFactory;\r
+import java.util.ArrayList;\r
+import java.util.Arrays;\r
+import java.util.HashMap;\r
+import java.util.List;\r
+import java.util.Map;\r
\r
import org.apache.log4j.Logger;\r
-import org.springframework.beans.factory.annotation.Autowired;\r
+import org.springframework.beans.BeansException;\r
+import org.springframework.context.ApplicationContext;\r
+import org.springframework.context.ApplicationContextAware;\r
+import org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean;\r
+import org.springframework.security.access.AccessDecisionVoter;\r
+import org.springframework.security.authentication.AuthenticationProvider;\r
+import org.springframework.security.authentication.ProviderManager;\r
+import org.springframework.security.authentication.UsernamePasswordAuthenticationToken;\r
+import org.springframework.security.authentication.dao.DaoAuthenticationProvider;\r
+import org.springframework.security.authentication.dao.ReflectionSaltSource;\r
+import org.springframework.security.authentication.encoding.Md5PasswordEncoder;\r
+import org.springframework.security.core.Authentication;\r
+import org.springframework.security.core.context.SecurityContext;\r
+import org.springframework.security.core.context.SecurityContextHolder;\r
import org.springframework.stereotype.Component;\r
import org.springframework.transaction.PlatformTransactionManager;\r
import org.springframework.transaction.TransactionStatus;\r
\r
import eu.etaxonomy.cdm.api.conversation.ConversationHolder;\r
import eu.etaxonomy.cdm.api.conversation.ConversationHolderMock;\r
+import eu.etaxonomy.cdm.api.service.IAgentService;\r
+import eu.etaxonomy.cdm.api.service.IAnnotationService;\r
+import eu.etaxonomy.cdm.api.service.IClassificationService;\r
+import eu.etaxonomy.cdm.api.service.ICollectionService;\r
+import eu.etaxonomy.cdm.api.service.ICommonService;\r
import eu.etaxonomy.cdm.api.service.IDatabaseService;\r
+import eu.etaxonomy.cdm.api.service.IDescriptionService;\r
+import eu.etaxonomy.cdm.api.service.IEntityConstraintViolationService;\r
+import eu.etaxonomy.cdm.api.service.IEntityValidationService;\r
+import eu.etaxonomy.cdm.api.service.IFeatureNodeService;\r
+import eu.etaxonomy.cdm.api.service.IFeatureTreeService;\r
+import eu.etaxonomy.cdm.api.service.IGrantedAuthorityService;\r
+import eu.etaxonomy.cdm.api.service.IGroupService;\r
+import eu.etaxonomy.cdm.api.service.IIdentificationKeyService;\r
+import eu.etaxonomy.cdm.api.service.ILocationService;\r
+import eu.etaxonomy.cdm.api.service.IMediaService;\r
+import eu.etaxonomy.cdm.api.service.INameService;\r
+import eu.etaxonomy.cdm.api.service.IOccurrenceService;\r
+import eu.etaxonomy.cdm.api.service.IPolytomousKeyNodeService;\r
+import eu.etaxonomy.cdm.api.service.IPolytomousKeyService;\r
+import eu.etaxonomy.cdm.api.service.IReferenceService;\r
+import eu.etaxonomy.cdm.api.service.IService;\r
+import eu.etaxonomy.cdm.api.service.ITaxonNodeService;\r
+import eu.etaxonomy.cdm.api.service.ITaxonService;\r
+import eu.etaxonomy.cdm.api.service.ITermService;\r
+import eu.etaxonomy.cdm.api.service.ITestService;\r
+import eu.etaxonomy.cdm.api.service.IUserService;\r
+import eu.etaxonomy.cdm.api.service.IVocabularyService;\r
+import eu.etaxonomy.cdm.api.service.IWorkingSetService;\r
+import eu.etaxonomy.cdm.api.service.molecular.IAmplificationService;\r
+import eu.etaxonomy.cdm.api.service.molecular.IPrimerService;\r
+import eu.etaxonomy.cdm.api.service.molecular.ISequenceService;\r
import eu.etaxonomy.cdm.ext.geo.IEditGeoService;\r
+import eu.etaxonomy.cdm.io.service.IIOService;\r
+import eu.etaxonomy.cdm.model.common.CdmBase;\r
+import eu.etaxonomy.cdm.persistence.hibernate.permission.CdmPermissionEvaluator;\r
+import eu.etaxonomy.cdm.persistence.hibernate.permission.ICdmPermissionEvaluator;\r
+import eu.etaxonomy.cdm.persistence.hibernate.permission.UnanimousBasedUnrevokable;\r
+import eu.etaxonomy.cdm.persistence.hibernate.permission.voter.DescriptionBaseVoter;\r
+import eu.etaxonomy.cdm.persistence.hibernate.permission.voter.DescriptionElementVoter;\r
+import eu.etaxonomy.cdm.persistence.hibernate.permission.voter.GrantAlwaysVoter;\r
+import eu.etaxonomy.cdm.persistence.hibernate.permission.voter.TaxonBaseVoter;\r
+import eu.etaxonomy.cdm.persistence.hibernate.permission.voter.TaxonNodeVoter;\r
+import eu.etaxonomy.taxeditor.remoting.source.ICdmRemoteSource;\r
+import eu.etaxonomy.taxeditor.service.CachedCommonServiceImpl;\r
+import eu.etaxonomy.taxeditor.service.CdmServiceRequestExecutor;\r
+import eu.etaxonomy.taxeditor.service.ICachedCommonService;\r
+import eu.etaxonomy.taxeditor.service.TermServiceRequestExecutor;\r
+import eu.etaxonomy.taxeditor.session.CdmEntitySessionManager;\r
+import eu.etaxonomy.taxeditor.session.ICdmEntitySessionManager;\r
\r
\r
/**\r
*\r
*/\r
@Component\r
-public class CdmApplicationRemoteConfiguration extends CdmApplicationDefaultConfiguration {\r
- \r
- @SuppressWarnings("unused")\r
- private static final Logger logger = Logger.getLogger(CdmApplicationRemoteConfiguration.class);\r
-\r
- @Autowired\r
- IEditGeoService editGeoService;\r
- \r
- public CdmApplicationRemoteConfiguration() {\r
- }\r
- \r
+public class CdmApplicationRemoteConfiguration implements ICdmApplicationConfiguration, ApplicationContextAware {\r
+\r
+ @SuppressWarnings("unused")\r
+ private static final Logger logger = Logger.getLogger(CdmApplicationRemoteConfiguration.class);\r
+\r
+ protected ApplicationContext applicationContext;\r
+\r
+ private ICdmRemoteSource remoteSource;\r
+\r
+ private Map serviceMap = new HashMap<Class<IService>, IService>();\r
+\r
+ private ICdmEntitySessionManager cdmEntitySessionManager;\r
+\r
+ private CdmPermissionEvaluator cdmPermissionEvaluator;\r
+\r
+ private ProviderManager authenticationManager;\r
+\r
+ private ICachedCommonService cachedCommonService;\r
+\r
+ public CdmApplicationRemoteConfiguration() {}\r
+\r
+ public CdmApplicationRemoteConfiguration(ICdmRemoteSource remoteSource) {\r
+ this.remoteSource = remoteSource;\r
+ }\r
+\r
+ public void setRemoteSource(ICdmRemoteSource remoteSource) {\r
+ this.remoteSource = remoteSource;\r
+ }\r
+\r
+ private Object getService(Class<?> clazz, String serviceSuffix, CdmServiceRequestExecutor executor) {\r
+ if(serviceMap.containsKey(clazz)) {\r
+ return serviceMap.get(clazz);\r
+ }\r
+ String baseUrl;\r
+ if(remoteSource.getContextPath() == null || remoteSource.getContextPath().equals("")) {\r
+ baseUrl = "http://" + remoteSource.getServer() + ":" + String.valueOf(remoteSource.getPort());\r
+ } else {\r
+ baseUrl = "http://" + remoteSource.getServer() + ":" + String.valueOf(remoteSource.getPort()) + "/" + remoteSource.getContextPath();\r
+ }\r
+ HttpInvokerProxyFactoryBean proxy = new HttpInvokerProxyFactoryBean();\r
+ proxy.setServiceInterface(clazz);\r
+ proxy.setServiceUrl(baseUrl + serviceSuffix);\r
+ if(executor != null) {\r
+ executor.setReadTimeout(0);\r
+ proxy.setHttpInvokerRequestExecutor(executor);\r
+ }\r
+ proxy.afterPropertiesSet();\r
+ Object service = proxy.getObject();\r
+ serviceMap.put(clazz, service);\r
+ return service;\r
+ }\r
+\r
+ // ****************************** APPLICATION CONTEXT *************************************************/\r
+\r
+ @Override\r
+ public void setApplicationContext(ApplicationContext applicationContext) throws BeansException{\r
+ this.applicationContext = applicationContext;\r
+ }\r
+\r
/* (non-Javadoc)\r
* @see eu.etaxonomy.cdm.api.application.CdmApplicationDefaultConfiguration#getTransactionManager()\r
*/\r
@Override\r
public PlatformTransactionManager getTransactionManager() throws UnsupportedOperationException {\r
- throw new UnsupportedOperationException("getTransactionManager is not implemented for CdmApplicationRemoteConfiguration");\r
- }\r
+ throw new UnsupportedOperationException("getTransactionManager is not implemented for CdmApplicationRemoteConfiguration");\r
+ }\r
\r
\r
- /* (non-Javadoc)\r
- * @see eu.etaxonomy.cdm.api.application.ICdmApplicationConfiguration#startTransaction()\r
+\r
+ /**\r
+ * @return\r
*/\r
+ public IEditGeoService getEditGeoService() {\r
+ return (IEditGeoService) getService(IEditGeoService.class, "/remoting/editgeo.service", new CdmServiceRequestExecutor());\r
+ }\r
+\r
+ /**\r
+ * @return\r
+ */\r
+ public ICachedCommonService getCachedCommonService(){\r
+ if(cachedCommonService == null) {\r
+ cachedCommonService = new CachedCommonServiceImpl();\r
+ }\r
+ return cachedCommonService;\r
+ }\r
+\r
+\r
+ public ICdmEntitySessionManager getCdmEntitySessionManager() {\r
+ if(cdmEntitySessionManager == null) {\r
+ cdmEntitySessionManager = new CdmEntitySessionManager();\r
+ }\r
+ return cdmEntitySessionManager;\r
+ }\r
+\r
+\r
+\r
+\r
+\r
+\r
+ // ****************************** GETTER *************************************************/\r
+\r
@Override\r
- public TransactionStatus startTransaction() throws UnsupportedOperationException {\r
- throw new UnsupportedOperationException("startTransaction is not implemented for CdmApplicationRemoteConfiguration");\r
- }\r
+ public final Object getBean(String name){\r
+ throw new UnsupportedOperationException("getBean is not implemented for CdmApplicationRemoteConfiguration");\r
+ }\r
\r
+ @Override\r
+ public IAgentService getAgentService(){\r
+ return (IAgentService) getService(IAgentService.class, "/remoting/agent.service", new CdmServiceRequestExecutor());\r
+ }\r
+\r
+ @Override\r
+ public IAnnotationService getAnnotationService(){\r
+ return (IAnnotationService) getService(IAnnotationService.class, "/remoting/annotation.service", new CdmServiceRequestExecutor());\r
+ }\r
+\r
+ @Override\r
+ public IDatabaseService getDatabaseService(){\r
+ return (IDatabaseService) getService(IDatabaseService.class, "/remoting/database.service", new CdmServiceRequestExecutor());\r
+ }\r
+\r
+ @Override\r
+ public INameService getNameService(){\r
+ return (INameService) getService(INameService.class, "/remoting/name.service", new CdmServiceRequestExecutor());\r
+ }\r
+\r
+ @Override\r
+ public IReferenceService getReferenceService(){\r
+ return (IReferenceService) getService(IReferenceService.class, "/remoting/reference.service", new CdmServiceRequestExecutor());\r
+ }\r
+\r
+ @Override\r
+ public ITaxonService getTaxonService(){\r
+ return (ITaxonService) getService(ITaxonService.class, "/remoting/taxon.service", new CdmServiceRequestExecutor());\r
+ }\r
+\r
+ @Override\r
+ public IClassificationService getClassificationService(){\r
+ return (IClassificationService) getService(IClassificationService.class, "/remoting/classification.service", new CdmServiceRequestExecutor());\r
+ }\r
+\r
+ @Override\r
+ public ITaxonNodeService getTaxonNodeService(){\r
+ return (ITaxonNodeService) getService(ITaxonNodeService.class, "/remoting/taxonnode.service", new CdmServiceRequestExecutor());\r
+ }\r
+\r
+ @Override\r
+ public IDescriptionService getDescriptionService(){\r
+ return (IDescriptionService) getService(IDescriptionService.class, "/remoting/description.service", new CdmServiceRequestExecutor());\r
+ }\r
+\r
+ @Override\r
+ public IOccurrenceService getOccurrenceService(){\r
+ return (IOccurrenceService) getService(IOccurrenceService.class, "/remoting/occurrence.service", new CdmServiceRequestExecutor());\r
+ }\r
+\r
+ @Override\r
+ public IPrimerService getPrimerService(){\r
+ return (IPrimerService) getService(IPrimerService.class, "/remoting/primer.service", new CdmServiceRequestExecutor());\r
+ }\r
+\r
+ @Override\r
+ public IAmplificationService getAmplificationService(){\r
+ return (IAmplificationService) getService(IAmplificationService.class, "/remoting/amplification.service", new CdmServiceRequestExecutor());\r
+ }\r
+\r
+ @Override\r
+ public ISequenceService getSequenceService(){\r
+ return (ISequenceService) getService(ISequenceService.class, "/remoting/sequence.service", new CdmServiceRequestExecutor());\r
+ }\r
+\r
+ @Override\r
+ public IMediaService getMediaService(){\r
+ return (IMediaService) getService(IMediaService.class, "/remoting/media.service", new CdmServiceRequestExecutor());\r
+ }\r
+\r
+ @Override\r
+ public ITermService getTermService(){\r
+ return (ITermService) getService(ITermService.class, "/remoting/term.service", new TermServiceRequestExecutor());\r
+ }\r
+\r
+ @Override\r
+ public ICommonService getCommonService(){\r
+ return (ICommonService) getService(ICommonService.class, "/remoting/common.service", new CdmServiceRequestExecutor());\r
+ }\r
+\r
+ @Override\r
+ public ILocationService getLocationService(){\r
+ return (ILocationService) getService(ILocationService.class, "/remoting/location.service", new CdmServiceRequestExecutor());\r
+ }\r
+\r
+ @Override\r
+ public IUserService getUserService(){\r
+ return (IUserService) getService(IUserService.class, "/remoting-public/user.service", new CdmServiceRequestExecutor());\r
+ }\r
+\r
+ @Override\r
+ public IGrantedAuthorityService getGrantedAuthorityService(){\r
+ return (IGrantedAuthorityService) getService(IGrantedAuthorityService.class, "/remoting/grantedauthority.service", new CdmServiceRequestExecutor());\r
+ }\r
+\r
+ @Override\r
+ public IService<CdmBase> getMainService(){\r
+ return null;\r
+ }\r
+\r
+\r
+ @Override\r
+ public ProviderManager getAuthenticationManager(){\r
+ if(authenticationManager != null) {\r
+ return authenticationManager;\r
+ }\r
+ Md5PasswordEncoder passwordEncoder = new Md5PasswordEncoder();\r
+ ReflectionSaltSource saltSource = new ReflectionSaltSource();\r
+ saltSource.setUserPropertyToUse("getUsername");\r
+\r
+ DaoAuthenticationProvider daoAuthenticationProvider = new DaoAuthenticationProvider();\r
+ daoAuthenticationProvider.setUserDetailsService(getUserService());\r
+ daoAuthenticationProvider.setSaltSource(saltSource);\r
+ daoAuthenticationProvider.setPasswordEncoder(passwordEncoder);\r
+\r
+ authenticationManager = new ProviderManager(Arrays.asList((AuthenticationProvider)daoAuthenticationProvider));\r
+ return authenticationManager;\r
+ }\r
+\r
+\r
+ @Override\r
+ public ConversationHolder NewConversation() {\r
+ return new ConversationHolderMock();\r
+ }\r
+\r
+ @Override\r
+ public ICollectionService getCollectionService(){\r
+ return (ICollectionService) getService(ICollectionService.class, "/remoting/collection.service", new CdmServiceRequestExecutor());\r
+ }\r
+\r
+ @Override\r
+ public IFeatureTreeService getFeatureTreeService(){\r
+ return (IFeatureTreeService) getService(IFeatureTreeService.class, "/remoting/featuretree.service", new CdmServiceRequestExecutor());\r
+ }\r
+\r
+ @Override\r
+ public IFeatureNodeService getFeatureNodeService(){\r
+ return (IFeatureNodeService) getService(IFeatureNodeService.class, "/remoting/featurenode.service", new CdmServiceRequestExecutor());\r
+ }\r
+\r
+ @Override\r
+ public IVocabularyService getVocabularyService(){\r
+ return (IVocabularyService) getService(IVocabularyService.class, "/remoting/vocabulary.service", new CdmServiceRequestExecutor());\r
+ }\r
+\r
+ @Override\r
+ public IIdentificationKeyService getIdentificationKeyService(){\r
+ return (IIdentificationKeyService) getService(IIdentificationKeyService.class, "/remoting/identificationkey.service", new CdmServiceRequestExecutor());\r
+ }\r
+\r
+ @Override\r
+ public IPolytomousKeyService getPolytomousKeyService(){\r
+ return (IPolytomousKeyService) getService(IPolytomousKeyService.class, "/remoting/polytomouskey.service", new CdmServiceRequestExecutor());\r
+ }\r
+\r
+\r
+ @Override\r
+ public IPolytomousKeyNodeService getPolytomousKeyNodeService(){\r
+ return (IPolytomousKeyNodeService) getService(IPolytomousKeyNodeService.class, "/remoting/polytomouskeynode.service", new CdmServiceRequestExecutor());\r
+ }\r
+\r
+ @Override\r
+ public IWorkingSetService getWorkingSetService(){\r
+ return (IWorkingSetService) getService(IWorkingSetService.class, "/remoting/workingset.service", new CdmServiceRequestExecutor());\r
+ }\r
+\r
+ @Override\r
+ public IGroupService getGroupService(){\r
+ return (IGroupService) getService(IGroupService.class, "/remoting/group.service", new CdmServiceRequestExecutor());\r
+ }\r
+\r
+\r
+ @Override\r
+ public IEntityValidationService getEntityValidationService(){\r
+ return (IEntityValidationService) getService(IEntityValidationService.class, "/remoting/entityvalidation.service", new CdmServiceRequestExecutor());\r
+ }\r
+\r
+\r
+ @Override\r
+ public IEntityConstraintViolationService getEntityConstraintViolationService(){\r
+ return (IEntityConstraintViolationService) getService(IEntityConstraintViolationService.class, "/remoting/entityconstraintviolation.service", new CdmServiceRequestExecutor());\r
+ }\r
+\r
+ @Override\r
+ public ICdmPermissionEvaluator getPermissionEvaluator(){\r
+\r
+ if(cdmPermissionEvaluator != null) {\r
+ return cdmPermissionEvaluator;\r
+ }\r
+ List<AccessDecisionVoter> decisionVoters = new ArrayList<AccessDecisionVoter>();\r
+ decisionVoters.add(new GrantAlwaysVoter());\r
+ decisionVoters.add(new TaxonNodeVoter());\r
+ decisionVoters.add(new TaxonBaseVoter());\r
+ decisionVoters.add(new DescriptionBaseVoter());\r
+ decisionVoters.add(new DescriptionElementVoter());\r
+ UnanimousBasedUnrevokable accessDecisionManager = new UnanimousBasedUnrevokable(decisionVoters);\r
+\r
+ cdmPermissionEvaluator = new CdmPermissionEvaluator();\r
+ cdmPermissionEvaluator.setAccessDecisionManager(accessDecisionManager);\r
+\r
+ return cdmPermissionEvaluator;\r
+ }\r
+\r
+\r
+ @Override\r
+ public TransactionStatus startTransaction() throws UnsupportedOperationException {\r
+ throw new UnsupportedOperationException("startTransaction is not implemented for CdmApplicationRemoteConfiguration");\r
+ }\r
\r
- /* (non-Javadoc)\r
- * @see eu.etaxonomy.cdm.api.application.ICdmApplicationConfiguration#startTransaction()\r
- */\r
@Override\r
public TransactionStatus startTransaction(Boolean readOnly) throws UnsupportedOperationException {\r
- throw new UnsupportedOperationException("startTransaction is not implemented for CdmApplicationRemoteConfiguration");\r
- }\r
+ throw new UnsupportedOperationException("startTransaction is not implemented for CdmApplicationRemoteConfiguration");\r
+ }\r
\r
\r
- /* (non-Javadoc)\r
- * @see eu.etaxonomy.cdm.api.application.CdmApplicationDefaultConfiguration#commitTransaction(org.springframework.transaction.TransactionStatus)\r
- */\r
@Override\r
public void commitTransaction(TransactionStatus txStatus) throws UnsupportedOperationException {\r
- throw new UnsupportedOperationException("commitTransaction is not implemented for CdmApplicationRemoteConfiguration");\r
- }\r
- \r
- /* (non-Javadoc)\r
- * @see eu.etaxonomy.cdm.api.application.CdmApplicationDefaultConfiguration#NewConversation()\r
- */\r
- @Override\r
- public ConversationHolder NewConversation() { \r
- return new ConversationHolderMock();\r
- }\r
- \r
- /**\r
- * @return\r
- */\r
- public IEditGeoService getEditGeoService() {\r
- return this.editGeoService;\r
- }\r
- \r
- /* (non-Javadoc)\r
- * @see eu.etaxonomy.cdm.api.application.CdmApplicationDefaultConfiguration#setDataSource(javax.sql.DataSource)\r
- */\r
- @Override\r
- public void setDataSource(DataSource dataSource) { \r
- }\r
- \r
- /* (non-Javadoc)\r
- * @see eu.etaxonomy.cdm.api.application.CdmApplicationDefaultConfiguration#setTransactionManager(org.springframework.transaction.PlatformTransactionManager)\r
- */\r
- @Override\r
- public void setTransactionManager(PlatformTransactionManager transactionManager) { \r
- }\r
- \r
- /* (non-Javadoc)\r
- * @see eu.etaxonomy.cdm.api.application.CdmApplicationDefaultConfiguration#setSessionFactory(org.hibernate.SessionFactory)\r
- */\r
- @Override\r
- public void setSessionFactory(SessionFactory sessionFactory) { \r
+ throw new UnsupportedOperationException("commitTransaction is not implemented for CdmApplicationRemoteConfiguration");\r
+ }\r
+\r
+ @Override\r
+ public void authenticate(String username, String password){\r
+ UsernamePasswordAuthenticationToken tokenForUser = new UsernamePasswordAuthenticationToken(username, password);\r
+ Authentication authentication = this.getAuthenticationManager().authenticate(tokenForUser);\r
+ SecurityContext context = SecurityContextHolder.getContext();\r
+ context.setAuthentication(authentication);\r
+ }\r
+\r
+ public IIOService getIOService() {\r
+ return (IIOService) getService(IIOService.class, "/remoting/io.service", new CdmServiceRequestExecutor());\r
+ }\r
+\r
+ public ITestService getTestService() {\r
+ return (ITestService) getService(ITestService.class, "/remoting/test.service", new CdmServiceRequestExecutor());\r
}\r
}\r
/**
-* Copyright (C) 2014 EDIT
-* European Distributed Institute of Taxonomy
-* http://www.e-taxonomy.eu
-*
-* The contents of this file are subject to the Mozilla Public License Version 1.1
-* See LICENSE.TXT at the top of this package for the full license terms.
-*/
+ * Copyright (C) 2014 EDIT
+ * European Distributed Institute of Taxonomy
+ * http://www.e-taxonomy.eu
+ *
+ * The contents of this file are subject to the Mozilla Public License Version 1.1
+ * See LICENSE.TXT at the top of this package for the full license terms.
+ */
package eu.etaxonomy.cdm.api.application;
import java.util.List;
-import java.util.Properties;
import org.apache.log4j.Logger;
import org.hibernate.collection.internal.AbstractPersistentCollection;
import org.hibernate.proxy.AbstractLazyInitializer;
-import org.springframework.beans.MutablePropertyValues;
-import org.springframework.beans.factory.config.BeanDefinition;
-import org.springframework.beans.factory.xml.XmlBeanDefinitionReader;
import org.springframework.context.ApplicationListener;
-import org.springframework.context.support.PropertySourcesPlaceholderConfigurer;
import org.springframework.core.io.ClassPathResource;
import org.springframework.core.io.Resource;
+import eu.etaxonomy.cdm.api.service.ITestService;
import eu.etaxonomy.cdm.common.monitor.IProgressMonitor;
import eu.etaxonomy.cdm.common.monitor.NullProgressMonitor;
-import eu.etaxonomy.cdm.common.monitor.SubProgressMonitor;
-import eu.etaxonomy.cdm.remote.ICdmRemoteSource;
+import eu.etaxonomy.cdm.io.service.IIOService;
+import eu.etaxonomy.taxeditor.remoting.cache.CdmRemoteCacheManager;
+import eu.etaxonomy.taxeditor.remoting.source.ICdmRemoteSource;
+import eu.etaxonomy.taxeditor.service.ICachedCommonService;
+import eu.etaxonomy.taxeditor.session.ICdmEntitySessionManager;
/**
* CDM Application Controller class for remoting clients
- *
+ *
* FIXME:Remoting extending {@link CdmApplicationController} is a temporary workaround.
* The {@link CdmApplicationController} should be split into a CdmApplicationControllerBase
* class with {@link CdmApplicationController} and this class as subclasses
*
*/
public class CdmApplicationRemoteController extends CdmApplicationController {
-
+
private static final Logger logger = Logger.getLogger(CdmApplicationRemoteController.class);
- public static final Resource DEFAULT_REMOTE_APPLICATION_CONTEXT_RESOURCE =
- new ClassPathResource("/eu/etaxonomy/cdm/remotingApplicationContext.xml");
+
+ public static final Resource DEFAULT_REMOTE_APPLICATION_CONTEXT_RESOURCE =
+ new ClassPathResource("/eu/etaxonomy/cdm/remotingApplicationContext.xml");
private final Resource applicationContextResource;
private final IProgressMonitor progressMonitor;
-
+ private ICdmRemoteSource remoteSource;
+
+
/**
* Creates new instance of CdmApplicationRemoteController
- *
+ *
* @param applicationContextResource
* @param remoteSource
* @param omitTermLoading
* @param listeners
* @return
*/
- public static CdmApplicationRemoteController NewInstance(Resource applicationContextResource,
- ICdmRemoteSource remoteSource,
- boolean omitTermLoading,
- IProgressMonitor progressMonitor,
- List<ApplicationListener> listeners) {
- return new CdmApplicationRemoteController(applicationContextResource,
- remoteSource,
- omitTermLoading,
- progressMonitor,
- listeners);
-
- }
+// public static CdmApplicationRemoteController NewInstance(Resource applicationContextResource,
+// ICdmRemoteSource remoteSource,
+// IProgressMonitor progressMonitor,
+// List<ApplicationListener> listeners) {
+// return new CdmApplicationRemoteController(applicationContextResource,
+// remoteSource,
+// false,
+// progressMonitor,
+// listeners);
+//
+// }
/**
* Creates new instance of CdmApplicationRemoteController
- *
+ *
* @param applicationContextResource
* @param remoteSource
* @param omitTermLoading
* @param listeners
* @return
*/
- public static CdmApplicationRemoteController NewInstance(ICdmRemoteSource remoteSource,
- boolean omitTermLoading,
- IProgressMonitor progressMonitor,
- List<ApplicationListener> listeners) {
-
- return new CdmApplicationRemoteController(DEFAULT_REMOTE_APPLICATION_CONTEXT_RESOURCE,
- remoteSource,
- omitTermLoading,
- progressMonitor,
- listeners);
-
+ public static CdmApplicationRemoteController NewInstance(ICdmRemoteSource remoteSource,
+ IProgressMonitor progressMonitor,
+ List<ApplicationListener> listeners) {
+
+ return new CdmApplicationRemoteController(DEFAULT_REMOTE_APPLICATION_CONTEXT_RESOURCE,
+ remoteSource,
+ false,
+ progressMonitor,
+ listeners);
+
+ }
+
+ public static CdmApplicationRemoteController NewInstance(ICdmRemoteSource remoteSource,
+ boolean validateXml,
+ IProgressMonitor progressMonitor,
+ List<ApplicationListener> listeners) {
+
+ return new CdmApplicationRemoteController(DEFAULT_REMOTE_APPLICATION_CONTEXT_RESOURCE,
+ remoteSource,
+ validateXml,
+ progressMonitor,
+ listeners);
+
}
-
- /**
- * Constructs CdmApplicationRemoteController
- *
- * @param applicationContextResource
- * @param remoteSource
- * @param omitTermLoading
- * @param progressMonitor
- * @param listeners
- */
- private CdmApplicationRemoteController(Resource applicationContextResource,
- ICdmRemoteSource remoteSource,
- boolean omitTermLoading,
- IProgressMonitor progressMonitor,
-
List<ApplicationListener> listeners){
- logger.info("Start CdmApplicationRemoteController with remote source: " + remoteSource.getName());
- this.applicationContextResource =
- applicationContextResource != null ? applicationContextResource : DEFAULT_REMOTE_APPLICATION_CONTEXT_RESOURCE;
+
+ /**
+ * Constructs CdmApplicationRemoteController
+ *
+ * @param applicationContextResource
+ * @param remoteSource
+ * @param omitTermLoading
+ * @param progressMonitor
+ * @param listeners
+ */
+ private CdmApplicationRemoteController(Resource applicationContextResource,
+ ICdmRemoteSource remoteSource,
+ boolean validateXml,
+ IProgressMonitor progressMonitor,
+ List<ApplicationListener> listeners){
+ logger.info("Start CdmApplicationRemoteController with remote source: " + remoteSource.getName());
+ this.applicationContextResource =
+ applicationContextResource != null ? applicationContextResource : DEFAULT_REMOTE_APPLICATION_CONTEXT_RESOURCE;
this.progressMonitor = progressMonitor != null ? progressMonitor : new NullProgressMonitor();
+ this.remoteSource = remoteSource;
+ setNewRemoteSource(remoteSource, validateXml, listeners);
+
+ }
+
+
- setNewRemoteSource(remoteSource, omitTermLoading, listeners);
-
- }
-
-
-
/**
* Creates and starts a new spring application context
- *
+ *
* @param remoteSource object for connecting to an http-invoker server
* @param omitTermLoading
* @param listeners
* @return
*/
- protected boolean setNewRemoteSource(ICdmRemoteSource remoteSource,
- boolean omitTermLoading,
-
List<ApplicationListener> listeners){
+ public boolean setNewRemoteSource(ICdmRemoteSource remoteSource,
+ boolean validateXml,
+ List<ApplicationListener> listeners){
logger.info("Connecting to '" + remoteSource.getName() + "'");
- MonitoredGenericApplicationContext applicationContext = new MonitoredGenericApplicationContext();
- int refreshTasks = 45;
- int nTasks = 5 + refreshTasks;
+ int nTasks = 2;
progressMonitor.beginTask("Connecting to '" + remoteSource.getName() + "'", nTasks);
- progressMonitor.subTask("Registering remote source.");
- PropertySourcesPlaceholderConfigurer pspc = new PropertySourcesPlaceholderConfigurer();
- Properties properties = new Properties();
- properties.setProperty("remoteServer", remoteSource.getServer());
- properties.setProperty("remotePort", String.valueOf(remoteSource.getPort()));
- properties.setProperty("remoteContext", remoteSource.getContextPath());
- pspc.setProperties(properties);
- applicationContext.addBeanFactoryPostProcessor(pspc);
- progressMonitor.worked(1);
-
- XmlBeanDefinitionReader xmlReader = new XmlBeanDefinitionReader(applicationContext);
- //xmlReader.setValidationMode(XmlBeanDefinitionReader.VALIDATION_NONE);
- progressMonitor.subTask("Registering resources.");
- xmlReader.loadBeanDefinitions(applicationContextResource);
+ progressMonitor.subTask("Initialising CDM Model Cache ...");
+ CdmRemoteCacheManager.getInstance();
progressMonitor.worked(1);
-
- //omitTerms
- if (omitTermLoading == true){
- String initializerName = "persistentTermInitializer";
- BeanDefinition beanDef = applicationContext.getBeanDefinition(initializerName);
- MutablePropertyValues values = beanDef.getPropertyValues();
- values.addPropertyValue("omit", omitTermLoading);
- }
-
- if (listeners != null){
- for(ApplicationListener listener : listeners){
- applicationContext.addApplicationListener(listener);
- }
- }
-
-
- applicationContext.refresh(new SubProgressMonitor(progressMonitor, refreshTasks));
- applicationContext.start();
-
- progressMonitor.subTask("Cleaning up.");
- setApplicationContext(applicationContext);
+ progressMonitor.subTask("Starting application context ...");
+ init();
progressMonitor.worked(1);
-
progressMonitor.done();
return true;
}
-
+
+
+
/* (non-Javadoc)
* @see eu.etaxonomy.cdm.api.application.CdmApplicationController#init()
*/
@Override
- protected void init(){
- configuration = (ICdmApplicationConfiguration)applicationContext.getBean("cdmApplicationRemoteConfiguration");
- AbstractLazyInitializer.setConfiguration(this);
- AbstractPersistentCollection.setConfiguration(this);
+ protected void init(){
+ configuration = new CdmApplicationRemoteConfiguration(remoteSource);
+ ((CdmApplicationRemoteConfiguration)configuration).setApplicationContext(applicationContext);
+ AbstractLazyInitializer.setConfiguration((CdmApplicationRemoteConfiguration)configuration);
+ AbstractPersistentCollection.setConfiguration((CdmApplicationRemoteConfiguration)configuration);
+ }
+ public ICdmEntitySessionManager getCdmEntitySessionManager() {
+ return ((CdmApplicationRemoteConfiguration)configuration).getCdmEntitySessionManager();
}
+ public IIOService getIOService(){
+ return ((CdmApplicationRemoteConfiguration)configuration).getIOService();
+ }
+
+ public ITestService getTestService(){
+ return ((CdmApplicationRemoteConfiguration)configuration).getTestService();
+ }
+
+ public ICachedCommonService getCachedCommonService(){
+ return ((CdmApplicationRemoteConfiguration)configuration).getCachedCommonService();
+ }
}
--- /dev/null
+// $Id$
+/**
+* Copyright (C) 2015 EDIT
+* European Distributed Institute of Taxonomy
+* http://www.e-taxonomy.eu
+*
+* The contents of this file are subject to the Mozilla Public License Version 1.1
+* See LICENSE.TXT at the top of this package for the full license terms.
+*/
+package eu.etaxonomy.cdm.api.application;
+
+import java.io.File;
+import java.io.IOException;
+import java.lang.reflect.InvocationTargetException;
+import java.lang.reflect.Method;
+import java.lang.reflect.Type;
+import java.net.URISyntaxException;
+import java.net.URL;
+import java.util.Dictionary;
+import java.util.jar.Attributes;
+import java.util.jar.JarFile;
+import java.util.jar.Manifest;
+
+import org.eclipse.core.runtime.FileLocator;
+import org.eclipse.core.runtime.Platform;
+import org.eclipse.osgi.util.ManifestElement;
+import org.osgi.framework.Bundle;
+import org.osgi.framework.BundleException;
+import org.osgi.framework.Constants;
+import org.springframework.security.core.context.SecurityContext;
+
+import eu.etaxonomy.cdm.api.cache.CdmServiceCacher;
+import eu.etaxonomy.cdm.api.service.ICommonService;
+import eu.etaxonomy.cdm.api.service.IService;
+import eu.etaxonomy.cdm.api.service.ITestService;
+import eu.etaxonomy.cdm.io.service.IIOService;
+import eu.etaxonomy.cdm.model.common.CdmBase;
+import eu.etaxonomy.taxeditor.service.ICachedCommonService;
+import eu.etaxonomy.taxeditor.session.DefaultNewEntityListener;
+
+/**
+ * @author cmathew
+ * @date 17 Jun 2015
+ *
+ */
+public class CdmApplicationState {
+
+ private static CdmApplicationState cdmApplicationState;
+
+ private ICdmApplicationConfiguration appConfig;
+
+ private ICdmDataChangeService dataChangeService;
+
+ private SecurityContext securityContext;
+
+ private static CdmServiceCacher cdmServiceCacher;
+
+ private static String cdmlibVersion = null;
+ private static String cdmlibLastModified = null;
+
+ public static CdmApplicationState getInstance() {
+ if(cdmApplicationState == null) {
+ cdmApplicationState = new CdmApplicationState();
+ }
+
+ return cdmApplicationState;
+ }
+
+ public void setAppConfig(ICdmApplicationConfiguration appConfig) {
+ this.appConfig = appConfig;
+ if(appConfig instanceof CdmApplicationRemoteController) {
+ CdmBase.setNewEntityListener(new DefaultNewEntityListener());
+ } else {
+ CdmBase.setNewEntityListener(null);
+ }
+ }
+
+ public ICdmApplicationConfiguration getAppConfig() {
+ return appConfig;
+ }
+
+ public static void setCurrentAppConfig(ICdmApplicationConfiguration appConfig) {
+ getInstance().setAppConfig(appConfig);
+ }
+
+ public static ICdmApplicationConfiguration getCurrentAppConfig() {
+ return getInstance().getAppConfig();
+ }
+
+ /**
+ * @return the dataChangeService
+ */
+ public ICdmDataChangeService getDataChangeService() {
+ return dataChangeService;
+ }
+
+ /**
+ * @param dataChangeService the dataChangeService to set
+ */
+ public void setDataChangeService(ICdmDataChangeService dataChangeService) {
+ this.dataChangeService = dataChangeService;
+ }
+
+ public static ICdmDataChangeService getCurrentDataChangeService() {
+ return getInstance().getDataChangeService();
+ }
+
+ public static void setCurrentDataChangeService(ICdmDataChangeService dataChangeService) {
+ getInstance().setDataChangeService(dataChangeService);
+ }
+
+
+
+ /**
+ * @return the securityContext
+ */
+ public SecurityContext getSecurityContext() {
+ return securityContext;
+ }
+
+ /**
+ * @param securityContext the securityContext to set
+ */
+ public void setSecurityContext(SecurityContext securityContext) {
+ this.securityContext = securityContext;
+ }
+
+ /**
+ * @return the securityContext
+ */
+ public static SecurityContext getCurrentSecurityContext() {
+ return getInstance().getSecurityContext();
+ }
+
+ /**
+ * @param securityContext the securityContext to set
+ */
+ public static void setCurrentSecurityContext(SecurityContext securityContext) {
+ getInstance().setSecurityContext(securityContext);
+ }
+
+ public static void dispose() {
+ getInstance().setCurrentDataChangeService(null);
+ getInstance().setAppConfig(null);
+ getInstance().setSecurityContext(null);
+ cdmApplicationState = null;
+ cdmServiceCacher = null;
+ cdmlibVersion = null;
+ cdmlibLastModified = null;
+ }
+
+
+ /**
+ * Generic method that will scan the getters of {@link ICdmApplicationConfiguration} for the given service
+ * interface. If a matching getter is found the according service implementation is returned by
+ * invoking the getter otherwise the method returns <code>null</code>.
+ *
+ * @param <T>
+ * @param serviceClass
+ * @return the configured implementation of <code>serviceClass</code> or <code>null</code>
+ * @throws CdmApplicationException
+ */
+ public static <T extends IService> T getService(Class<T> serviceClass) throws CdmApplicationException {
+ ICdmApplicationConfiguration configuration = getCurrentAppConfig();
+
+ Method[] methods = ICdmApplicationConfiguration.class.getDeclaredMethods();
+
+ T service = null;
+
+ for (Method method : methods) {
+ Type type = method.getGenericReturnType();
+
+ if (type.equals(serviceClass)) {
+ try {
+ service = (T) method.invoke(configuration, null);
+ break;
+ } catch (IllegalArgumentException iae) {
+ throw new CdmApplicationException(iae);
+ } catch (IllegalAccessException iae) {
+ throw new CdmApplicationException(iae);
+ } catch (InvocationTargetException ite) {
+ throw new CdmApplicationException(ite);
+ }
+ }
+ }
+
+ return service;
+ }
+
+
+ /**
+ * @see #getService(Class)
+ * As ICommonService is not extending IService we need a specific request here
+ */
+ public static ICommonService getCommonService() {
+ ICdmApplicationConfiguration configuration = getCurrentAppConfig();
+
+ return configuration.getCommonService();
+
+ }
+
+ public static IIOService getIOService() {
+ ICdmApplicationConfiguration configuration = getCurrentAppConfig();
+
+ return ((CdmApplicationRemoteController)configuration).getIOService();
+
+ }
+
+
+ public static ITestService getTestService() {
+ ICdmApplicationConfiguration configuration = getCurrentAppConfig();
+
+ return ((CdmApplicationRemoteController)configuration).getTestService();
+
+ }
+
+ public static ICachedCommonService getCachedCommonService() {
+ ICdmApplicationConfiguration configuration = getCurrentAppConfig();
+
+ return ((CdmApplicationRemoteController)configuration).getCachedCommonService();
+
+ }
+
+ public static CdmServiceCacher getCdmServiceCacher() {
+ return cdmServiceCacher;
+ }
+
+ public static void setCdmServiceCacher(CdmServiceCacher cacher) {
+ cdmServiceCacher = cacher;
+ }
+
+ public static void updateCdmlibManifestInfo() {
+ cdmlibVersion = null;
+ cdmlibLastModified = null;
+ String cdmlibPathPrefix = "lib/cdmlib-services-";
+ String jarSuffix = ".jar";
+ Bundle bundle = Platform.getBundle("eu.etaxonomy.taxeditor.cdmlib");
+ Dictionary<String, String> headers = bundle.getHeaders();
+ String bundleClasspath = headers.get(Constants.BUNDLE_CLASSPATH);
+ try {
+ ManifestElement[] elements = ManifestElement.parseHeader(Constants.BUNDLE_CLASSPATH, bundleClasspath);
+ for (ManifestElement manifestElement : elements) {
+ String jar = manifestElement.getValue();
+ if(jar.startsWith(cdmlibPathPrefix) && jar.endsWith(jarSuffix)) {
+ URL fileURL = bundle.getEntry(jar);
+ File file = null;
+ try {
+ file = new File(FileLocator.resolve(fileURL).toURI());
+ JarFile jarFile = new JarFile(file);
+ Manifest manifest = jarFile.getManifest();
+ Attributes attributes = manifest.getMainAttributes();
+ // from the OSGI spec the LastModified value is " the number of milliseconds
+ // since midnight Jan. 1, 1970 UTC with the condition that a change must
+ // always result in a higher value than the previous last modified time
+ // of any bundle"
+ cdmlibVersion = attributes.getValue("Bundle-Version");
+ cdmlibLastModified = attributes.getValue("Bnd-LastModified");
+
+ if(cdmlibVersion == null || cdmlibLastModified == null) {
+ throw new IllegalStateException("Invalid cdmlib manifest info");
+ }
+ } catch (URISyntaxException urise) {
+ throw new IllegalStateException(urise);
+ } catch (IOException ioe) {
+ throw new IllegalStateException(ioe);
+ }
+ }
+ }
+ } catch (BundleException e) {
+ throw new IllegalStateException(e);
+ }
+ }
+
+ public static String getCdmlibVersion() {
+ if(cdmlibVersion == null) {
+ updateCdmlibManifestInfo();
+ }
+ return cdmlibVersion;
+ }
+
+ public static String getCdmlibLastModified() {
+ if(cdmlibLastModified == null) {
+ updateCdmlibManifestInfo();
+ }
+ return cdmlibLastModified;
+ }
+}
--- /dev/null
+// $Id$
+/**
+* Copyright (C) 2015 EDIT
+* European Distributed Institute of Taxonomy
+* http://www.e-taxonomy.eu
+*
+* The contents of this file are subject to the Mozilla Public License Version 1.1
+* See LICENSE.TXT at the top of this package for the full license terms.
+*/
+package eu.etaxonomy.cdm.api.application;
+
+import java.util.HashSet;
+import java.util.Set;
+
+import eu.etaxonomy.cdm.model.common.CdmBase;
+
+/**
+ * @author cmathew
+ * @date 7 Apr 2015
+ *
+ */
+public class CdmChangeEvent {
+
+ public enum Action {
+ Create,
+ Update,
+ Delete
+ }
+
+ private final Action action;
+ private final Set<CdmBase> changedObjects;
+ private final Class sourceType;
+ private Class entityType;
+ private Object source;
+
+ public CdmChangeEvent(Action action, Set<CdmBase> changedObjects, Class sourceType) {
+ this.action = action;
+ this.changedObjects = changedObjects;
+ this.sourceType = sourceType;
+ }
+
+ public CdmChangeEvent(Action action, CdmBase changedObject, Class sourceType) {
+ this.action = action;
+ changedObjects = new HashSet<CdmBase>();
+ changedObjects.add(changedObject);
+ this.sourceType = sourceType;
+ }
+
+ public CdmChangeEvent(Action action, Set<CdmBase> changedObjects, Class sourceType, Class entityType) {
+ this(action, changedObjects, sourceType);
+ this.entityType = entityType;
+ }
+
+ public CdmChangeEvent(Action action, Set<CdmBase> changedObjects, Object source) {
+ this(action, changedObjects, source.getClass());
+ this.source = source;
+ }
+
+ /**
+ * @return the action
+ */
+ public Action getAction() {
+ return action;
+ }
+
+ /**
+ * @return the changedObjects
+ */
+ public Set<? extends CdmBase> getChangedObjects() {
+ return changedObjects;
+ }
+
+ /**
+ * @return the sourceType
+ */
+ public Class getSourceType() {
+ return sourceType;
+ }
+
+
+ /**
+ * @return the source
+ */
+ public Object getSource() {
+ return source;
+ }
+
+ public Class getEntityType() {
+ return entityType;
+ }
+
+ public boolean hasChanges() {
+ return changedObjects != null && !changedObjects.isEmpty();
+ }
+
+}
--- /dev/null
+// $Id$
+/**
+ * Copyright (C) 2015 EDIT
+ * European Distributed Institute of Taxonomy
+ * http://www.e-taxonomy.eu
+ *
+ * The contents of this file are subject to the Mozilla Public License Version 1.1
+ * See LICENSE.TXT at the top of this package for the full license terms.
+ */
+package eu.etaxonomy.cdm.api.application;
+
+import java.util.ArrayList;
+import java.util.HashSet;
+import java.util.List;
+import java.util.Set;
+
+/**
+ * @author cmathew
+ * @date 18 Jun 2015
+ *
+ */
+public class CdmDataChangeService implements ICdmDataChangeService {
+
+ protected final Set<ICdmChangeListener> listeners;
+
+ private final List<CdmChangeEvent> currentEvents;
+
+ public CdmDataChangeService() {
+ listeners = new HashSet<ICdmChangeListener>();
+ currentEvents = new ArrayList<CdmChangeEvent>();
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.store.ICdmDataChangeService#register(eu.etaxonomy.cdm.api.application.ICdmChangeListener)
+ */
+ @Override
+ public void register(ICdmChangeListener listener) {
+ listeners.add(listener);
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.cdm.api.application.ICdmDataChangeService#unregister(eu.etaxonomy.cdm.api.application.ICdmChangeListener)
+ */
+ @Override
+ public void unregister(ICdmChangeListener listener) {
+ listeners.remove(listener);
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.store.ICdmDataChangeService#addEvent(eu.etaxonomy.cdm.api.application.CdmChangeEvent)
+ */
+ @Override
+ public void addEvent(CdmChangeEvent event) {
+ currentEvents.add(event);
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.store.ICdmDataChangeService#fireCurrentChangeEvents(boolean)
+ */
+ @Override
+ public void fireCurrentChangeEvents(boolean async) {
+ try {
+ for(CdmChangeEvent event : currentEvents) {
+ fireChangeEvent(event,async);
+ }
+ } finally {
+ currentEvents.clear();
+ }
+ }
+
+
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.store.ICdmDataChangeService#fireChangeEvent(eu.etaxonomy.cdm.api.application.CdmChangeEvent, boolean)
+ */
+ @Override
+ public void fireChangeEvent(final CdmChangeEvent event, boolean async) {
+
+ for(final ICdmChangeListener listener : listeners) {
+ listener.onChange(event);
+ }
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.store.ICdmDataChangeService#clear()
+ */
+ @Override
+ public void clear() {
+ listeners.clear();
+ currentEvents.clear();
+ }
+
+
+}
--- /dev/null
+// $Id$
+/**
+* Copyright (C) 2015 EDIT
+* European Distributed Institute of Taxonomy
+* http://www.e-taxonomy.eu
+*
+* The contents of this file are subject to the Mozilla Public License Version 1.1
+* See LICENSE.TXT at the top of this package for the full license terms.
+*/
+package eu.etaxonomy.cdm.api.application;
+
+/**
+ * @author cmathew
+ * @date 7 Apr 2015
+ *
+ */
+public interface ICdmChangeListener {
+
+ public void onChange(CdmChangeEvent event);
+
+}
--- /dev/null
+// $Id$
+/**
+ * Copyright (C) 2015 EDIT
+ * European Distributed Institute of Taxonomy
+ * http://www.e-taxonomy.eu
+ *
+ * The contents of this file are subject to the Mozilla Public License Version 1.1
+ * See LICENSE.TXT at the top of this package for the full license terms.
+ */
+package eu.etaxonomy.cdm.api.application;
+
+
+/**
+ * @author cmathew
+ * @date 18 Jun 2015
+ *
+ */
+public interface ICdmDataChangeService {
+
+ public abstract void register(ICdmChangeListener listener);
+
+ public abstract void unregister(ICdmChangeListener listener);
+
+ public abstract void addEvent(CdmChangeEvent event);
+
+ public abstract void fireCurrentChangeEvents(boolean async);
+
+ public abstract void fireChangeEvent(CdmChangeEvent event, boolean async);
+
+ public abstract void clear();
+
+}
\ No newline at end of file
import java.util.UUID;
-import org.springframework.beans.factory.annotation.Autowired;
+import net.sf.ehcache.config.CacheConfiguration;
+import net.sf.ehcache.config.SizeOfPolicyConfiguration;
+
import org.springframework.stereotype.Component;
-import eu.etaxonomy.cdm.api.service.ITermService;
+import eu.etaxonomy.cdm.api.application.CdmApplicationState;
import eu.etaxonomy.cdm.model.common.CdmBase;
+import eu.etaxonomy.cdm.model.common.DefinedTermBase;
+import eu.etaxonomy.taxeditor.remoting.cache.CacheLoader;
+import eu.etaxonomy.taxeditor.remoting.cache.CdmEntityCacheKey;
+import eu.etaxonomy.taxeditor.remoting.cache.CdmTransientEntityCacher;
+import eu.etaxonomy.taxeditor.service.TermServiceRequestExecutor;
+import eu.etaxonomy.taxeditor.session.CdmEntitySession;
+import eu.etaxonomy.taxeditor.session.ICdmEntitySession;
+import eu.etaxonomy.taxeditor.session.ICdmEntitySessionManager;
+import eu.etaxonomy.taxeditor.session.ICdmEntitySessionManagerObserver;
/**
* Class which uses CDM services to cache cdm entities
* @param <T>
*/
@Component
-public class CdmServiceCacher<T extends CdmBase> extends CdmCacher {
+public class CdmServiceCacher extends CdmCacher implements ICdmEntitySessionManagerObserver {
- @Autowired
- ITermService termService;
- @Override
- protected T findByUuid(UUID uuid) {
- return (T)termService.findWithoutFlush(uuid);
- }
- /* (non-Javadoc)
- * @see eu.etaxonomy.cdm.api.cache.CdmCacher#setup()
- */
+ private ICdmEntitySessionManager cdmEntitySessionManager;
+
+ private CdmTransientEntityCacher cdmTransientEntityCacher;
+
+ private CacheLoader cacheLoader;
+
@Override
protected void setup() {
- // TODO Auto-generated method stub
+ DefinedTermBase.setCacher(this);
+ CdmTransientEntityCacher.setDefaultCacher(this);
+ TermServiceRequestExecutor.setDefaultCacher(this);
+ cacheLoader = new CacheLoader(this);
+ }
+
+
+ @Override
+ protected CacheConfiguration getDefaultCacheConfiguration() {
+ // For a better understanding on how to size caches, refer to
+ // http://ehcache.org/documentation/configuration/cache-size
+
+ SizeOfPolicyConfiguration sizeOfConfig = new SizeOfPolicyConfiguration();
+ sizeOfConfig.setMaxDepth(100);
+ sizeOfConfig.setMaxDepthExceededBehavior("abort");
+
+ return new CacheConfiguration(DEFAULT_CACHE_NAME, 0)
+ .eternal(true)
+ .statistics(true)
+ .sizeOfPolicy(sizeOfConfig)
+ .overflowToOffHeap(false);
+
+ }
+
+ @Override
+ protected CdmBase findByUuid(UUID uuid) {
+ CdmBase term = CdmApplicationState.getCurrentAppConfig().getTermService().findWithoutFlush(uuid);
+ return load(term);
}
/* (non-Javadoc)
* @see eu.etaxonomy.cdm.model.ICdmCacher#isCachable(eu.etaxonomy.cdm.model.common.CdmBase)
*/
@Override
- public boolean isCachable(CdmBase arg0) {
- // TODO Auto-generated method stub
+ public boolean isCachable(CdmBase cdmEntity) {
+ if(cdmEntity != null && cdmEntity instanceof DefinedTermBase) {
+ return true;
+ }
return false;
}
+
+ public void setCdmEntitySessionManager(ICdmEntitySessionManager cdmEntitySessionManager) {
+ this.cdmEntitySessionManager = cdmEntitySessionManager;
+ if(cdmEntitySessionManager != null) {
+ cdmEntitySessionManager.addSessionObserver(this);
+ }
+ }
+
+
+ public CdmTransientEntityCacher getCurrentCacher() {
+ ICdmEntitySession cdmEntitySession = cdmEntitySessionManager.getActiveSession();
+ if(cdmEntitySession != null && cdmEntitySession instanceof CdmEntitySession) {
+ return ((CdmEntitySession) cdmEntitySession).getCacher();
+ }
+ return null;
+ }
+
+ @Override
+ public CdmBase getFromCache(CdmBase cdmBase) {
+ CdmBase cachedCdmEntity = null;
+ // first we check in the active session cache if the
+ // entity has been loaded there
+ // FIXME:Remoting do we really need the cdmTransientEntityCacher
+ // here. Is it not guarenteed that all every entity which 'isCachable'
+ // by this cacher is cached only in this cacher ?
+ if(!isCachable(cdmBase) && cdmTransientEntityCacher != null) {
+ CdmEntityCacheKey key = CdmTransientEntityCacher.generateKey(cdmBase);
+ cachedCdmEntity = cdmTransientEntityCacher.getFromCache(key);
+
+ }
+ if(cachedCdmEntity == null) {
+ cachedCdmEntity = super.getFromCache(cdmBase);
+ }
+ return cachedCdmEntity;
+ }
+
+
/* (non-Javadoc)
* @see eu.etaxonomy.cdm.api.cache.CdmCacher#load(eu.etaxonomy.cdm.model.common.CdmBase)
*/
@Override
- public CdmBase load(CdmBase arg0) {
- // TODO Auto-generated method stub
- return null;
+ public CdmBase load(CdmBase cdmEntity) {
+ CdmBase cachedCdmEntity = getFromCache(cdmEntity.getUuid());
+
+ if(isCachable(cdmEntity) && cachedCdmEntity == null) {
+ cachedCdmEntity = cacheLoader.load(cdmEntity, false, true);
+ }
+ return cachedCdmEntity;
}
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySessionManagerObserver#changed()
+ */
+ @Override
+ public void changed() {
+ ICdmEntitySession cdmEntitySession = cdmEntitySessionManager.getActiveSession();
+ if(cdmEntitySession != null && cdmEntitySession instanceof CdmEntitySession) {
+ this.cdmTransientEntityCacher = ((CdmEntitySession) cdmEntitySession).getCacher();
+ } else {
+ this.cdmTransientEntityCacher = null;
+ }
+ }
}
--- /dev/null
+package eu.etaxonomy.taxeditor.remoting;
+
+public class CdmEagerLoadingException extends RuntimeException {
+
+ public CdmEagerLoadingException(Throwable t) {
+ super(t);
+ }
+
+ public CdmEagerLoadingException(String message) {
+ super(message);
+ }
+
+}
--- /dev/null
+package eu.etaxonomy.taxeditor.remoting;
+
+public class CdmRemotingException extends RuntimeException {
+
+ /**
+ *
+ */
+ private static final long serialVersionUID = -560332689478356360L;
+
+ public CdmRemotingException(String message) {
+ super(message);
+ }
+
+ public CdmRemotingException(Exception exception) {
+ super(exception);
+ }
+
+}
--- /dev/null
+// $Id$
+/**
+ * Copyright (C) 2015 EDIT
+ * European Distributed Institute of Taxonomy
+ * http://www.e-taxonomy.eu
+ *
+ * The contents of this file are subject to the Mozilla Public License Version 1.1
+ * See LICENSE.TXT at the top of this package for the full license terms.
+ */
+package eu.etaxonomy.taxeditor.remoting.cache;
+
+import java.lang.reflect.Field;
+import java.util.ArrayList;
+import java.util.Collection;
+import java.util.Iterator;
+import java.util.List;
+import java.util.Map;
+
+import net.sf.ehcache.Cache;
+import net.sf.ehcache.Element;
+
+import org.apache.log4j.Logger;
+import org.springframework.util.ReflectionUtils;
+
+import eu.etaxonomy.cdm.api.service.pager.Pager;
+import eu.etaxonomy.cdm.model.ICdmCacher;
+import eu.etaxonomy.cdm.model.common.CdmBase;
+import eu.etaxonomy.cdm.persistence.dto.MergeResult;
+
+/**
+ * @author cmathew
+ * @date 19 Feb 2015
+ *
+ */
+public class CacheLoader {
+ private static final Logger logger = Logger.getLogger(CacheLoader.class);
+
+ private static boolean isRecursiveEnabled = true;
+
+ protected final ICdmCacher cdmCacher;
+
+ private final Cache cdmlibModelCache;
+
+
+
+ public CacheLoader(ICdmCacher cdmCacher) {
+ this.cdmCacher = cdmCacher;
+ this.cdmlibModelCache = CdmRemoteCacheManager.getInstance().getCdmModelGetMethodsCache();
+
+ }
+
+
+ public CdmModelFieldPropertyFromClass getFromCdmlibModelCache(String className) {
+ Element e = cdmlibModelCache.get(className);
+ if (e == null) {
+ return null;
+ } else {
+ return (CdmModelFieldPropertyFromClass) e.getObjectValue();
+ }
+ }
+
+ @SuppressWarnings("unchecked")
+ public <T extends Object> T load(T obj, boolean recursive, boolean update) {
+ if(obj == null) {
+ return null;
+ }
+ if(obj instanceof CdmBase) {
+ return (T) load((CdmBase)obj, recursive, update);
+ } else if (obj instanceof Map) {
+ return (T) load((Map<T,T>)obj, recursive, update);
+ } else if (obj instanceof Collection) {
+ return (T) load((Collection<T>)obj, recursive, update);
+ } else if(obj instanceof Pager) {
+ load(((Pager)obj).getRecords(), recursive, update);
+ return obj;
+ } else if(obj instanceof MergeResult) {
+ return (T) load((MergeResult<CdmBase>)obj, recursive, update);
+ }
+
+ return obj;
+ }
+
+ @SuppressWarnings("unchecked")
+ private <T extends Object> T loadRecursive(T obj, List<Object> alreadyVisitedEntities, boolean update) {
+ if(obj == null) {
+ return null;
+ }
+ if(obj instanceof CdmBase) {
+ return (T) loadRecursive((CdmBase)obj, alreadyVisitedEntities, update);
+ } else if (obj instanceof Map) {
+ return (T) load((Map<T,T>)obj, alreadyVisitedEntities, update);
+ } else if (obj instanceof Collection) {
+ return (T) load((Collection<T>)obj, alreadyVisitedEntities, update);
+ }
+
+
+ logger.info("No caching yet for type " + obj.getClass().getName());
+
+ return obj;
+ }
+
+ public <T extends Object> Map<T,T> load(Map<T,T> map, boolean recursive, boolean update){
+
+
+ if(isRecursiveEnabled && recursive) {
+ logger.info("---- starting recursive load for cdm entity map");
+ List<Object> alreadyVisitedEntities = new ArrayList<Object>();
+ Map<T,T> cachedMap = load(map, alreadyVisitedEntities, update);
+ alreadyVisitedEntities.clear();
+ logger.info("---- ending recursive load for cdm entity map \n");
+ return cachedMap;
+ } else {
+ return load(map, null, update);
+ }
+ }
+
+
+ private <T extends Object> Map<T,T> load(Map<T,T> map, List<Object> alreadyVisitedEntities, boolean update){
+ //map = (Map<T,T>)deproxy(map);
+
+ if(map == null || map.isEmpty()) {
+ return map;
+ }
+
+ int originalMapSize = map.size();
+ Object[] result = new Object[ map.size() * 2 ];
+ Iterator<Map.Entry<T,T>> iter = map.entrySet().iterator();
+ int i=0;
+ // to avoid ConcurrentModificationException
+ alreadyVisitedEntities.add(map);
+ while ( iter.hasNext() ) {
+ Map.Entry<T,T> e = iter.next();
+ result[i++] = e.getKey();
+ result[i++] = e.getValue();
+ }
+
+ for(i=0; i<result.length;i++) {
+ if(alreadyVisitedEntities == null) {
+ result[i] = load(result[i], false, update);
+ } else {
+ result[i] = loadRecursive(result[i], alreadyVisitedEntities, update);
+ }
+ }
+ map.clear();
+ for(i = 0; i < originalMapSize; i+=2 ) {
+ map.put(
+ (T)result[i],
+ (T)result[i+1]
+ );
+ }
+ return map;
+ }
+
+ public <T extends Object> Collection<T> load(Collection<T> collection, boolean recursive, boolean update){
+
+ Collection<T> loadedCollection;
+ if(isRecursiveEnabled && recursive) {
+ logger.info("---- starting recursive load for cdm entity collection");
+ List<Object> alreadyVisitedEntities = new ArrayList<Object>();
+ Collection<T> cachedCollection = load(collection, alreadyVisitedEntities, update);
+ alreadyVisitedEntities.clear();
+ logger.info("---- ending recursive load for cdm entity collection \n");
+ loadedCollection = cachedCollection;
+ } else {
+ loadedCollection = load(collection, null, update);
+ }
+ return loadedCollection;
+ }
+
+ @SuppressWarnings("unchecked")
+ private <T extends Object> Collection<T> load(Collection<T> collection, List<Object> alreadyVisitedEntities, boolean update) {
+
+
+
+ if(collection == null || collection.isEmpty()) {
+ return collection;
+ }
+ int length = collection.size();
+ Object[] result = new Object[length];
+ Iterator<T> collectionItr = collection.iterator();
+ int count = 0;
+ // to avoid ConcurrentModificationException
+ alreadyVisitedEntities.add(collection);
+ while(collectionItr.hasNext()) {
+ Object obj = collectionItr.next();
+ if(alreadyVisitedEntities == null) {
+ result[count] = load(obj, false, update);
+ } else {
+ result[count] = loadRecursive(obj, alreadyVisitedEntities, update);
+ }
+
+ count++;
+ }
+
+ collection.clear();
+
+ for ( int i = 0; i < length; i++ ) {
+ collection.add((T)result[i]);
+ }
+
+ return collection;
+ }
+
+
+ public MergeResult<CdmBase> load(MergeResult<CdmBase> mergeResult, boolean recursive, boolean update) {
+ CdmBase cdmBase = load(mergeResult.getMergedEntity(), recursive, update);
+ load(mergeResult.getNewEntities(), recursive, update);
+ return mergeResult;
+ }
+
+
+ /**
+ * Puts the (Key,Value) pair of ({@link java.util.UUID}, {@link eu.etaxonomy.cdm.model.common.CdmBase}),
+ * in the cache corresponding to the given cache id
+ *
+ * @param cacheId
+ * @param uuid
+ * @param cdmEntity
+ */
+ public CdmBase load(CdmBase cdmEntity, boolean recursive, boolean update) {
+ if(cdmEntity == null) {
+ return null;
+ }
+
+ // start by looking up the cdm entity in the cache
+ CdmBase cachedCdmEntity = cdmCacher.getFromCache(cdmEntity);
+
+ if(cachedCdmEntity != null) {
+ // if cdm entity was found in cache then
+ logger.info(" - object of type " + cdmEntity.getClass().getName() + " with id " + cdmEntity.getId() + " already exists");
+ // .. return if the cached and input objects are identical, else (this is a newly loaded object so) continue
+ if(cachedCdmEntity == cdmEntity) {
+ return cachedCdmEntity;
+ }
+ }
+
+ CdmBase loadedCdmBase;
+ if(isRecursiveEnabled && recursive) {
+ logger.info("---- starting recursive load for cdm entity " + cdmEntity.getClass().getName() + " with id " + cdmEntity.getId());
+ List<Object> alreadyVisitedEntities = new ArrayList<Object>();
+ CdmBase cb = loadRecursive(cdmEntity, alreadyVisitedEntities, update);
+ alreadyVisitedEntities.clear();
+ logger.info("---- ending recursive load for cdm entity " + cdmEntity.getClass().getName() + " with id " + cdmEntity.getId() + "\n");
+ loadedCdmBase = cb;
+ } else {
+ loadedCdmBase = load(cdmEntity);
+ }
+ return loadedCdmBase;
+
+ }
+
+
+ protected CdmBase load(CdmBase cdmEntity) {
+ logger.info("loading object of type " + cdmEntity.getClass().getName() + " with id " + cdmEntity.getId());
+ cdmCacher.put((CdmBase)ProxyUtils.deproxy(cdmEntity));
+ return cdmCacher.getFromCache(cdmEntity);
+ }
+
+
+ private CdmBase loadRecursive(CdmBase cdmEntity, List<Object> alreadyVisitedEntities, boolean update) {
+
+ CdmBase cachedCdmEntity = load(cdmEntity);
+
+
+ // we want to recursive through the cdmEntity (and not the cachedCdmEntity)
+ // since there could be new or deleted objects in the cdmEntity sub-graph
+
+ // start by getting the fields from the cdm entity
+ String className = cdmEntity.getClass().getName();
+ CdmModelFieldPropertyFromClass cmgmfc = getFromCdmlibModelCache(className);
+ if(cmgmfc != null) {
+ alreadyVisitedEntities.add(cdmEntity);
+ List<String> fields = cmgmfc.getFields();
+ for(String field : fields) {
+ // retrieve the actual object corresponding to the field.
+ // this object will be either a CdmBase or a Collection / Map
+ // with CdmBase as the generic type
+
+ CdmBase cdmEntityInSubGraph = getCdmBaseTypeFieldValue(cdmEntity, cachedCdmEntity, field, alreadyVisitedEntities, update);
+ if(cdmEntityInSubGraph != null) {
+ //checkForIdenticalCdmEntity(alreadyVisitedEntities, cdmEntityInSubGraph);
+ if(!checkForIdenticalCdmEntity(alreadyVisitedEntities, cdmEntityInSubGraph)) {
+ logger.info("recursive loading object of type " + cdmEntityInSubGraph.getClass().getName() + " with id " + cdmEntityInSubGraph.getId());
+ loadRecursive(cdmEntityInSubGraph, alreadyVisitedEntities, update);
+ } else {
+ logger.info("object of type " + cdmEntityInSubGraph.getClass().getName() + " with id " + cdmEntityInSubGraph.getId() + " already visited");
+ }
+ }
+ }
+ } else {
+ throw new CdmClientCacheException("CdmEntity with class " + cdmEntity.getClass().getName() + " is not found in the cdmlib model cache. " +
+ "The cache may be corrupted or not in sync with the latest model version" );
+ }
+
+ return cachedCdmEntity;
+ }
+
+
+ private CdmBase getCdmBaseTypeFieldValue(CdmBase cdmEntity,
+ CdmBase cachedCdmEntity,
+ String fieldName,
+ List<Object> alreadyVisitedEntities,
+ boolean update) {
+
+ // this method attempts to make sure that for any two objects found in
+ // the object graph, if they are equal then they should also be the same,
+ // which is crucial for the merge to work
+ if(cachedCdmEntity == null) {
+ throw new CdmClientCacheException("When trying to set field value, the cached cdm entity cannot be null");
+ }
+
+ Class<?> clazz = cdmEntity.getClass();
+ try {
+ // this call will search in the provided class as well as
+ // the super classes until it finds the field
+ Field field = ReflectionUtils.findField(clazz, fieldName);
+
+ if(field == null) {
+ throw new CdmClientCacheException("Field '" + fieldName
+ + "' not found when searching in class '" + clazz.getName() + "' and its supercalsses");
+ }
+ field.setAccessible(true);
+ Object o = field.get(cdmEntity);
+ // resetting the value in cdm entity to the deproxied object
+ o = ProxyUtils.deproxy(o);
+ field.set(cdmEntity, o);
+ Object cachedo = field.get(cachedCdmEntity);
+ CdmBase cdmEntityInSubGraph = null;
+
+ if(update || ProxyUtils.isProxy(cachedo)) {
+ // if we are in update mode we have to make the field of the cached entity
+ // up-to-date by setting it to the value of the cdm entity being loaded
+ //
+ // if the cdm entity is a proxy then we always update to make sure that
+ // newly created entities are always up-to-date
+ //
+ // NOTE : the field is overridden in the case of the exception
+ // found below
+ field.set(cachedCdmEntity, o);
+
+ }
+
+ if(o != null && !ProxyUtils.isProxy(o)) {
+ if(CdmBase.class.isAssignableFrom(o.getClass())) {
+ logger.info("found initialised cdm entity '" + fieldName + "' in object of type " + clazz.getName() + " with id " + cdmEntity.getId());
+
+ cdmEntityInSubGraph = (CdmBase)o;
+ CdmBase cachedCdmEntityInSubGraph = cdmCacher.getFromCache(cdmEntityInSubGraph);
+
+ if(cachedCdmEntityInSubGraph != null) {
+ if(cachedCdmEntityInSubGraph != cdmEntityInSubGraph) {
+ // exception : is the case where
+ // the field has been already initialised, cached and
+ // is not the same as the one in the cache, in which case we set the value
+ // of the field to the one found in the cache
+ logger.info("setting cached + real value to '" + fieldName + "' in object of type " + clazz.getName() + " with id " + cdmEntity.getId());
+ field.set(cachedCdmEntity, cachedCdmEntityInSubGraph);
+ field.set(cdmEntity, cachedCdmEntityInSubGraph);
+ } else {
+ // since the field value object in cdmEntity
+ // is the same as the field value object in cachedCdmEntity
+ // we are sure that the its subgraph is also correctly loaded,
+ // so we can exit the recursion
+ return null;
+ }
+ }
+ } else if(o instanceof Map && !checkForIdenticalCdmEntity(alreadyVisitedEntities, o)) {
+ loadRecursive((Map)o, alreadyVisitedEntities, update);
+ } else if(o instanceof Collection && !checkForIdenticalCdmEntity(alreadyVisitedEntities, o)) {
+ loadRecursive((Collection)o, alreadyVisitedEntities, update);
+ }
+ }
+ // we return the original cdm entity in the sub graph because we
+ // want to continue to recurse on the input cdm entity graph
+ // and not the one in the cache
+ return cdmEntityInSubGraph;
+ } catch (SecurityException e) {
+ throw new CdmClientCacheException(e);
+ } catch (IllegalArgumentException e) {
+ throw new CdmClientCacheException(e);
+ } catch (IllegalAccessException e) {
+ throw new CdmClientCacheException(e);
+ }
+ }
+
+ private boolean checkForIdenticalCdmEntity(List<Object> objList, Object objToCompare) {
+ if(objToCompare != null) {
+ for(Object obj : objList) {
+ if(obj == objToCompare) {
+ return true;
+ }
+ }
+ }
+ return false;
+ }
+
+
+ public static boolean isRecursiveEnabled() {
+ return isRecursiveEnabled;
+ }
+
+ public static void setRecursiveEnabled(boolean ire) {
+ isRecursiveEnabled = ire;
+ }
+}
--- /dev/null
+package eu.etaxonomy.taxeditor.remoting.cache;
+
+public class CdmClientCacheException extends RuntimeException {
+
+ public CdmClientCacheException(String message) {
+ super(message);
+ }
+
+ public CdmClientCacheException(Exception e) {
+ super(e);
+ }
+}
--- /dev/null
+package eu.etaxonomy.taxeditor.remoting.cache;
+
+import eu.etaxonomy.cdm.model.common.CdmBase;
+
+public class CdmEntityCacheKey {
+
+ private Class<? extends CdmBase> persistenceClass;
+ private int persistenceId;
+
+ public CdmEntityCacheKey(CdmBase cdmBase) {
+ this.persistenceClass = cdmBase.getClass();
+ this.persistenceId = cdmBase.getId();
+ }
+
+ public CdmEntityCacheKey(Class<? extends CdmBase> clazz, int id) {
+ this.persistenceClass = clazz;
+ this.persistenceId = id;
+ }
+
+
+
+ public Class<? extends CdmBase> getPersistenceClass() {
+ return persistenceClass;
+ }
+
+ public int getPersistenceId() {
+ return persistenceId;
+ }
+ @Override
+ public boolean equals(Object obj) {
+ if(obj == null || !(obj instanceof CdmEntityCacheKey)) {
+ return false;
+ }
+
+ if(this == obj) {
+ return true;
+ }
+ CdmEntityCacheKey that = (CdmEntityCacheKey) obj;
+ if(this.persistenceClass.equals(that.persistenceClass) && this.persistenceId == that.persistenceId) {
+ return true;
+ }
+
+ return false;
+ }
+
+ @Override
+ public int hashCode() {
+ return (this.persistenceClass.getName() + String.valueOf(this.persistenceId)).hashCode();
+ }
+
+ @Override
+ public String toString() {
+ return this.persistenceClass.getName() + String.valueOf(this.persistenceId);
+ }
+
+}
--- /dev/null
+package eu.etaxonomy.taxeditor.remoting.cache;
+
+import java.io.FileInputStream;
+import java.io.FileOutputStream;
+import java.io.IOException;
+import java.io.ObjectInputStream;
+import java.io.ObjectOutputStream;
+import java.lang.reflect.Field;
+import java.net.URISyntaxException;
+import java.net.URL;
+import java.util.HashMap;
+import java.util.Iterator;
+import java.util.Map;
+
+import net.sf.ehcache.Cache;
+import net.sf.ehcache.Element;
+
+import org.eclipse.core.runtime.FileLocator;
+import org.eclipse.core.runtime.Platform;
+import org.hibernate.cfg.Configuration;
+import org.hibernate.mapping.PersistentClass;
+import org.hibernate.mapping.Property;
+import org.hibernate.property.Getter;
+import org.osgi.framework.Bundle;
+
+
+public class CdmModelCacher {
+
+
+
+
+ public static String HB_CONFIG_FILE_PATH= "/eu/etaxonomy/cdm/mappings/hibernate.cfg.xml";
+
+ public static final String CDM_MAP_SER_FILE_PATH = "resources/cdm.map.ser";
+
+
+
+
+ public void cacheGetterFields(Cache cache) throws IOException, ClassNotFoundException, URISyntaxException {
+ Map<String, CdmModelFieldPropertyFromClass> modelClassMap = loadModelClassMap();
+
+ cache.removeAll();
+
+ for(Map.Entry<String, CdmModelFieldPropertyFromClass> entry : modelClassMap.entrySet()) {
+ cache.put(new Element(entry.getKey(), entry.getValue()));
+ }
+ }
+
+ public Map<String, CdmModelFieldPropertyFromClass> loadModelClassMap() throws URISyntaxException, IOException, ClassNotFoundException {
+
+ Bundle bundle = Platform.getBundle("eu.etaxonomy.taxeditor.cdmlib");
+
+ URL modelMapFileBundleURL = bundle.getEntry(CDM_MAP_SER_FILE_PATH);
+ URL modelMapFileURL = FileLocator.resolve(modelMapFileBundleURL);
+ String modelMapFilePath = modelMapFileURL.getFile();
+
+ FileInputStream fin = new FileInputStream(modelMapFilePath);
+ ObjectInputStream ois = new ObjectInputStream(fin);
+ Map<String, CdmModelFieldPropertyFromClass> modelClassMap = (Map<String, CdmModelFieldPropertyFromClass>) ois.readObject();
+ ois.close();
+ return modelClassMap;
+ }
+
+
+ public Map<String, CdmModelFieldPropertyFromClass> generateModelClassMap() {
+
+ Configuration configuration = buildConfiguration(HB_CONFIG_FILE_PATH);
+ Iterator<PersistentClass> classMappingIterator = configuration.getClassMappings();
+
+ Map<String, CdmModelFieldPropertyFromClass> modelClassMap = new HashMap<String, CdmModelFieldPropertyFromClass>();
+
+ while(classMappingIterator.hasNext()) {
+ PersistentClass persistentClass = classMappingIterator.next();
+ Class mappedClass = persistentClass.getMappedClass();
+ String mappedClassName = mappedClass.getName();
+
+ CdmModelFieldPropertyFromClass cmgmfc = new CdmModelFieldPropertyFromClass(mappedClassName);
+ System.out.println("Adding class : " + mappedClassName + " to cache");
+ addGetters(persistentClass, cmgmfc);
+ modelClassMap.put(mappedClassName, cmgmfc);
+ }
+ return modelClassMap;
+ }
+
+
+ public static Configuration buildConfiguration(String hibernateConfigFilePath) {
+ Configuration configuration = new Configuration().configure(hibernateConfigFilePath);
+ configuration.buildMappings();
+ return configuration;
+ }
+
+ private void addGetters(PersistentClass persistentClass, CdmModelFieldPropertyFromClass cmgmfc) {
+ if (persistentClass != null) {
+ Iterator propertyIt = persistentClass.getPropertyIterator();
+
+ while(propertyIt.hasNext())
+ {
+ Property property = (Property)propertyIt.next();
+ Getter getter = property.getGetter(persistentClass.getMappedClass());
+ if(getter != null && getter.getMember() != null) {
+ Field field = (Field)getter.getMember();
+
+ //logger.info(" - contains field '" + field.getName() + "' of type '" + field.getType().getName() + "'");
+ cmgmfc.addGetMethods(field.getName());
+ }
+ }
+ addGetters(persistentClass.getSuperclass(), cmgmfc);
+ }
+ }
+
+
+
+ public static void main(String argv[]) {
+
+ // To re-create the serialised cdm map run,
+ // mvn exec:java -Dexec.mainClass="eu.etaxonomy.taxeditor.remoting.cache.CdmModelCacher"
+ // in the eu.etaxonomy.taxeditor.cdmlib project root dir
+ String CDM_MAP_SER_DIR = "resources/";
+
+ CdmModelCacher cdmModelCacher = new CdmModelCacher();
+ Map<String, CdmModelFieldPropertyFromClass> modelClassMap = cdmModelCacher.generateModelClassMap();
+ try{
+
+ FileOutputStream fout = new FileOutputStream(CDM_MAP_SER_DIR + "cdm.map.ser");
+ ObjectOutputStream oos = new ObjectOutputStream(fout);
+ oos.writeObject(modelClassMap);
+ oos.close();
+ System.out.println("CDM Map serialized");
+
+ }catch(Exception ex){
+ ex.printStackTrace();
+ }
+
+ }
+
+
+}
--- /dev/null
+package eu.etaxonomy.taxeditor.remoting.cache;
+
+import java.io.Serializable;
+import java.util.ArrayList;
+import java.util.List;
+
+public class CdmModelFieldPropertyFromClass implements Serializable {
+
+ private static final long serialVersionUID = 5726395976531887526L;
+ private String className;
+ private String parentClassName;
+
+ private List<String> fields = new ArrayList<String>();
+
+
+ public CdmModelFieldPropertyFromClass(String className) {
+ this.setClassName(className);
+ }
+
+ public String getParentClassName() {
+ return parentClassName;
+ }
+
+ public void setParentClassName(String parentClassName) {
+ this.parentClassName = parentClassName;
+ }
+
+ public List<String> getFields() {
+ return fields;
+ }
+
+ public void setFields(List<String> fields) {
+ this.fields = fields;
+ }
+
+ public void addGetMethods(String getMethod) {
+ this.fields.add(getMethod);
+ }
+
+ public String getClassName() {
+ return className;
+ }
+
+ public void setClassName(String className) {
+ this.className = className;
+ }
+
+
+
+
+}
--- /dev/null
+package eu.etaxonomy.taxeditor.remoting.cache;
+
+import java.io.IOException;
+import java.net.URISyntaxException;
+
+import net.sf.ehcache.Cache;
+import net.sf.ehcache.CacheException;
+import net.sf.ehcache.CacheManager;
+import net.sf.ehcache.config.CacheConfiguration;
+import net.sf.ehcache.config.SizeOfPolicyConfiguration;
+
+import org.apache.log4j.Logger;
+
+
+public class CdmRemoteCacheManager {
+
+ private static final Logger logger = Logger.getLogger(CdmRemoteCacheManager.class);
+
+
+ private Cache cdmlibModelCache;
+
+ private static CdmRemoteCacheManager cdmRemoteCacheManager = null;
+
+ public static final String CDM_MODEL_CACHE_NAME = "cdmModelGetMethodsCache";
+
+ private static Thread initThread;
+
+ private static boolean cacheInitialised = false;
+
+ public enum CdmCacheManagerType {
+ CDMLIB_MODEL,
+ DEFAULT
+ }
+
+ public static CdmRemoteCacheManager getInstance(){
+
+ if(cdmRemoteCacheManager == null) {
+ cdmRemoteCacheManager = new CdmRemoteCacheManager();
+ }
+ return cdmRemoteCacheManager;
+ }
+ private CdmRemoteCacheManager() {
+
+
+ try {
+ // NOTE:Programmatically creating the cache manager may solve the problem of
+ // recreating data written to disk on startup
+ // see https://stackoverflow.com/questions/1729605/ehcache-persist-to-disk-issues
+ //String cacheFilePath = CDMLIB_CACHE_MANAGER_CONFIG_RESOURCE.getFile().getAbsolutePath();
+ //InputStream in = this.getClass().getClassLoader().getResourceAsStream("cdmlib-ehcache.xml");
+
+ SizeOfPolicyConfiguration sizeOfConfig = new SizeOfPolicyConfiguration();
+ sizeOfConfig.setMaxDepth(1000);
+ sizeOfConfig.setMaxDepthExceededBehavior("abort");
+
+ CacheConfiguration modelcc = new CacheConfiguration(CDM_MODEL_CACHE_NAME, 0)
+ .eternal(true)
+ .statistics(true)
+ .sizeOfPolicy(sizeOfConfig)
+ .overflowToOffHeap(false);
+
+ cdmlibModelCache = new Cache(modelcc);
+
+ CacheManager.create().addCache(cdmlibModelCache);
+ CdmModelCacher cmdmc = new CdmModelCacher();
+ cmdmc.cacheGetterFields(cdmlibModelCache);
+
+ } catch (CacheException e) {
+ throw new CdmClientCacheException(e);
+ } catch (ClassNotFoundException e) {
+ throw new CdmClientCacheException(e);
+ } catch (IOException e) {
+ throw new CdmClientCacheException(e);
+ } catch (URISyntaxException e) {
+ throw new CdmClientCacheException(e);
+ }
+
+ }
+
+
+ public Cache getCdmModelGetMethodsCache(){
+ return cdmlibModelCache;
+ }
+
+ public static void removeEntityCaches() {
+ CacheManager cm = CacheManager.create();
+ String[] cacheNames = CacheManager.create().getCacheNames();
+ for(String cacheName : cacheNames) {
+ if(!cacheName.equals(CDM_MODEL_CACHE_NAME)) {
+ cm.removeCache(cacheName);
+ }
+ }
+ }
+}
--- /dev/null
+// $Id$
+/**
+ * Copyright (C) 2014 EDIT
+ * European Distributed Institute of Taxonomy
+ * http://www.e-taxonomy.eu
+ *
+ * The contents of this file are subject to the Mozilla Public License Version 1.1
+ * See LICENSE.TXT at the top of this package for the full license terms.
+ */
+package eu.etaxonomy.taxeditor.remoting.cache;
+
+import java.util.ArrayList;
+import java.util.Collection;
+import java.util.HashMap;
+import java.util.HashSet;
+import java.util.List;
+import java.util.Map;
+import java.util.Set;
+import java.util.UUID;
+
+import net.sf.ehcache.Cache;
+import net.sf.ehcache.CacheManager;
+import net.sf.ehcache.Element;
+import net.sf.ehcache.Status;
+import net.sf.ehcache.config.CacheConfiguration;
+import net.sf.ehcache.config.SizeOfPolicyConfiguration;
+import net.sf.ehcache.statistics.LiveCacheStatistics;
+
+import org.apache.log4j.Logger;
+
+import eu.etaxonomy.cdm.api.application.CdmApplicationState;
+import eu.etaxonomy.cdm.api.cache.CdmServiceCacher;
+import eu.etaxonomy.cdm.api.service.UpdateResult;
+import eu.etaxonomy.cdm.api.service.dto.CdmEntityIdentifier;
+import eu.etaxonomy.cdm.model.ICdmCacher;
+import eu.etaxonomy.cdm.model.common.CdmBase;
+import eu.etaxonomy.cdm.persistence.dto.MergeResult;
+import eu.etaxonomy.taxeditor.session.ICdmEntitySessionManager;
+
+/**
+ *
+ * This cache guarantees that
+ * - all objects put will be ancestors of CdmBase
+ * - all CdmBase objects in the cache will be already de-proxied
+ * - after any CdmBase object is put in the cache,
+ * all non-null / non-proxy CdmBase objects in the sub-graph
+ * will also be present in the cache.
+ *
+ * @author cmathew
+ * @date 14 Oct 2014
+ *
+ */
+
+public class CdmTransientEntityCacher implements ICdmCacher {
+
+ private static final Logger logger = Logger.getLogger(CdmTransientEntityCacher.class);
+
+
+ private final ICdmEntitySessionManager cdmEntitySessionManager;
+
+ private static CdmServiceCacher cdmServiceCacher;
+
+ private final String cacheId;
+
+ private final Cache cache;
+
+ private final CacheLoader cacheLoader;
+
+ private final Map<UUID, CdmBase> newEntitiesMap = new HashMap<UUID, CdmBase>();
+
+ public CdmTransientEntityCacher(String cacheId, ICdmEntitySessionManager cdmEntitySessionManager) {
+ this.cacheId = cacheId;
+
+ cache = new Cache(getEntityCacheConfiguration(cacheId));
+
+ CacheManager.create().addCache(cache);
+
+ this.cdmEntitySessionManager = cdmEntitySessionManager;
+
+ cacheLoader = new CacheLoader(this);
+
+ }
+
+ public CdmTransientEntityCacher(Object sessionOwner, ICdmEntitySessionManager cdmEntitySessionManager) {
+ this(generateCacheId(sessionOwner), cdmEntitySessionManager);
+ }
+
+ public static String generateCacheId(Object sessionOwner) {
+ return sessionOwner.getClass().getName() + String.valueOf(sessionOwner.hashCode());
+ }
+
+ /**
+ * Returns the default cache configuration.
+ *
+ * @return
+ */
+ private CacheConfiguration getEntityCacheConfiguration(String cacheId) {
+ SizeOfPolicyConfiguration sizeOfConfig = new SizeOfPolicyConfiguration();
+ sizeOfConfig.setMaxDepth(100);
+ sizeOfConfig.setMaxDepthExceededBehavior("abort");
+
+ return new CacheConfiguration(cacheId, 0)
+ .eternal(true)
+ .statistics(true)
+ .sizeOfPolicy(sizeOfConfig)
+ .overflowToOffHeap(false);
+
+ }
+
+ public static void setDefaultCacher(CdmServiceCacher css) {
+ cdmServiceCacher = css;
+ }
+
+ public LiveCacheStatistics getCacheStatistics() {
+ if(cache.getStatus() == Status.STATUS_ALIVE) {
+ return cache.getLiveCacheStatistics();
+ }
+ return null;
+
+ }
+
+ /**
+ * Returns the cache corresponding to the cache id
+ *
+ * @param cacheId
+ * @return
+ */
+ private Cache getCache() {
+ return CacheManager.create().getCache(cacheId);
+ }
+
+ public <T extends Object> T load(T obj, boolean update) {
+ return cacheLoader.load(obj, true, update);
+ }
+
+ public <T extends Object> Map<T,T> load(Map<T,T> map, boolean update){
+ return cacheLoader.load(map, true, update);
+ }
+
+ public <T extends Object> Collection<T> load(Collection<T> collection, boolean update){
+ return cacheLoader.load(collection, true, update);
+ }
+
+ public CdmBase load(CdmBase cdmEntity, boolean update) {
+ return cacheLoader.load(cdmEntity, true, update);
+ }
+
+
+ private CdmBase load(CdmEntityIdentifier cei, boolean update) {
+ return CdmApplicationState.getCommonService().findWithUpdate(cei.getCdmClass(), cei.getId());
+ }
+
+
+ public UpdateResult load(UpdateResult result, boolean update) {
+ // probably a good time to broadcast to other sessions
+
+ Set<CdmBase> updatedObjects = result.getUpdatedObjects();
+ Set<CdmBase> reloadedObjects = new HashSet<CdmBase>();
+ Set<CdmEntityIdentifier> updatedCdmIds = result.getUpdatedCdmIds();
+ boolean updatedCdmIdsIsEmpty = updatedCdmIds.isEmpty();
+
+ // if the cdm identifier set contains identifiers of objects already
+ // present in the updated objects set reomve them
+ for(CdmBase updatedObject : updatedObjects) {
+ if(updatedObject != null && exists(new CdmEntityCacheKey(updatedObject.getClass(), updatedObject.getId()))) {
+ CdmEntityIdentifier cdmEntityIdentifier = new CdmEntityIdentifier(updatedObject.getId(), updatedObject.getClass());
+ if(!updatedCdmIdsIsEmpty && updatedCdmIds.contains(cdmEntityIdentifier)) {
+ updatedCdmIds.remove(cdmEntityIdentifier);
+ }
+ reloadedObjects.add(cacheLoader.load(updatedObject, true, update));
+ }
+ }
+
+ // remote load cdm identifiers of objects which already exist
+ // in the cache
+
+ for(CdmEntityIdentifier cei : updatedCdmIds) {
+ if(exists(new CdmEntityCacheKey(cei.getCdmClass(), cei.getId()))) {
+ reloadedObjects.add(load(cei, update));
+ }
+
+ }
+ updatedObjects.clear();
+ result.addUpdatedObjects(reloadedObjects);
+ return result;
+ }
+
+ public MergeResult<CdmBase> load(MergeResult<CdmBase> mergeResult, boolean update) {
+ return cacheLoader.load(mergeResult, true, update);
+ }
+
+ public CdmModelFieldPropertyFromClass getFromCdmlibModelCache(String className) {
+ return cacheLoader.getFromCdmlibModelCache(className);
+ }
+
+
+ public void addNewEntity(CdmBase newEntity) {
+ if(newEntity != null && newEntity.getId() == 0 && newEntity.getUuid() != null) {
+ newEntitiesMap.put(newEntity.getUuid(), newEntity);
+ }
+ }
+
+ @Override
+ public void put(CdmBase cdmEntity) {
+
+ CdmBase cachedCdmEntity = cdmServiceCacher.load(cdmEntity);
+ if(cachedCdmEntity != null) {
+ logger.info("Cdm Entity with id : " + cdmEntity.getId() + " already exists in permanent cache. Ignoring put.");
+ return;
+ }
+ CdmEntityCacheKey id = new CdmEntityCacheKey(cdmEntity);
+
+ cachedCdmEntity = getFromCache(id);
+ if(cachedCdmEntity == null) {
+ CdmBase cdmEntityToCache = cdmEntity;
+ CdmBase newEntity = newEntitiesMap.get(cdmEntity.getUuid());
+ if(newEntity != null) {
+ newEntity.setId(cdmEntity.getId());
+ cdmEntityToCache = newEntity;
+ }
+ getCache().put(new Element(id, cdmEntityToCache));
+ cdmEntityToCache.initListener();
+ newEntitiesMap.remove(cdmEntity.getUuid());
+ logger.info(" - object of type " + cdmEntityToCache.getClass().getName() + " with id " + cdmEntityToCache.getId() + " put in cache");
+ return;
+ }
+ logger.info(" - object of type " + cdmEntity.getClass().getName() + " with id " + cdmEntity.getId() + " already exists");
+ }
+
+
+ private Element getCacheElement(CdmEntityCacheKey key) {
+ return getCache().get(key);
+ }
+
+
+ public CdmBase getFromCache(CdmEntityCacheKey id) {
+ Element e = getCacheElement(id);
+
+ if (e == null) {
+ return null;
+ } else {
+ return (CdmBase) e.getObjectValue();
+ }
+ }
+
+ public CdmBase getFromCache(Class<? extends CdmBase> clazz, int id) {
+ CdmEntityCacheKey cacheId = generateKey(clazz,id);
+ return getFromCache(cacheId);
+ }
+
+ @Override
+ public CdmBase getFromCache(CdmBase cdmBase) {
+
+ CdmEntityCacheKey cacheId = generateKey((CdmBase)ProxyUtils.deproxy(cdmBase));
+ // first try this cache
+ CdmBase cachedCdmEntity = getFromCache(cacheId);
+
+ if(cachedCdmEntity == null) {
+ // ... then try the permanent cache
+ cachedCdmEntity = cdmServiceCacher.getFromCache(cdmBase.getUuid());
+ }
+
+ return cachedCdmEntity;
+ }
+
+ public CdmBase getFromCache(CdmBase cdmBase, Class<? extends CdmBase> clazz) {
+
+ cdmBase = CdmBase.deproxy(cdmBase, clazz);
+ return getFromCache(cdmBase);
+ }
+
+ public List<CdmBase> getAllEntities() {
+ List<CdmBase> entities = new ArrayList<CdmBase>();
+ Map<String, CdmBase> elementsMap = getCache().getAllWithLoader(getCache().getKeys(), null);
+ for (Map.Entry<String, CdmBase> entry : elementsMap.entrySet()) {
+ entities.add(entry.getValue());
+ }
+ return entities;
+ }
+
+ public boolean exists(CdmEntityCacheKey key) {
+ return (getCacheElement(key) != null);
+ }
+
+ public boolean existsAndIsNotNull(CdmEntityCacheKey id) {
+ return getFromCache(id) != null;
+ }
+
+ public void clear() {
+ cache.removeAll();
+ }
+
+ public void dispose() {
+ CacheManager.create().removeCache(cache.getName());
+ cache.dispose();
+ newEntitiesMap.clear();
+
+ }
+
+
+ public static CdmEntityCacheKey generateKey(Class<? extends CdmBase> clazz, int id) {
+ return new CdmEntityCacheKey(clazz, id);
+ }
+
+
+ public static CdmEntityCacheKey generateKey(CdmBase cdmBase) {
+ Class<? extends CdmBase> entityClass = cdmBase.getClass();
+ int id = cdmBase.getId();
+ return new CdmEntityCacheKey(entityClass, id);
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.cdm.model.ICdmCacher#load(eu.etaxonomy.cdm.model.common.CdmBase)
+ */
+ @Override
+ public CdmBase load(CdmBase cdmEntity) {
+ return load(cdmEntity, true);
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.cdm.model.ICdmCacher#isCachable(eu.etaxonomy.cdm.model.common.CdmBase)
+ */
+ @Override
+ public boolean isCachable(CdmBase cdmEntity) {
+ return true;
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.cdm.model.ICdmCacher#exists(eu.etaxonomy.cdm.model.common.CdmBase)
+ */
+ @Override
+ public boolean exists(CdmBase cdmBase) {
+ return exists(generateKey(cdmBase));
+ }
+
+
+
+}
--- /dev/null
+// $Id$
+/**
+ * Copyright (C) 2015 EDIT
+ * European Distributed Institute of Taxonomy
+ * http://www.e-taxonomy.eu
+ *
+ * The contents of this file are subject to the Mozilla Public License Version 1.1
+ * See LICENSE.TXT at the top of this package for the full license terms.
+ */
+package eu.etaxonomy.taxeditor.remoting.cache;
+
+import java.lang.reflect.Field;
+import java.util.ArrayList;
+import java.util.Collection;
+import java.util.HashMap;
+import java.util.Iterator;
+import java.util.List;
+import java.util.Map;
+
+import net.sf.ehcache.Cache;
+import net.sf.ehcache.CacheManager;
+import net.sf.ehcache.Element;
+
+import org.apache.log4j.Logger;
+import org.hibernate.collection.spi.PersistentCollection;
+import org.hibernate.proxy.HibernateProxy;
+import org.hibernate.proxy.LazyInitializer;
+import org.springframework.util.ReflectionUtils;
+
+import eu.etaxonomy.cdm.api.cache.CdmCacher;
+import eu.etaxonomy.cdm.model.common.CdmBase;
+
+/**
+ * @author cmathew
+ * @date 9 Feb 2015
+ *
+ */
+public class EntityCacherDebugResult {
+
+ private static final Logger logger = Logger.getLogger(EntityCacherDebugResult.class);
+
+ private Map<CdmEntityInfo, CdmEntityInfo> duplicateCdmEntityMap;
+
+ private List<CdmEntityInfo> notInCacheList;
+
+ private CdmTransientEntityCacher cacher;
+
+ private List<CdmEntityInfo> rootElements;
+
+ StringBuilder debugOutput = new StringBuilder();
+
+ public EntityCacherDebugResult() {
+ }
+
+
+ public <T extends CdmBase> EntityCacherDebugResult(CdmTransientEntityCacher cacher, Collection<T> rootEntities) {
+ this.cacher = cacher;
+ init();
+
+ if(rootEntities != null && !rootEntities.isEmpty()) {
+ for(CdmBase rootEntity : rootEntities) {
+ debug(rootEntity, true);
+ String out = toString(duplicateCdmEntityMap, notInCacheList, rootEntity);
+ System.out.println(out);
+ debugOutput.append(out);
+ clear();
+ }
+
+ }
+ }
+
+ private void init() {
+ duplicateCdmEntityMap = new HashMap<CdmEntityInfo, CdmEntityInfo>();
+ notInCacheList = new ArrayList<CdmEntityInfo>();
+ rootElements = new ArrayList<CdmEntityInfo>();
+ }
+
+ private void clear() {
+ duplicateCdmEntityMap.clear();
+ notInCacheList.clear();
+ }
+
+ public void addDuplicateEntity(CdmEntityInfo cei, CdmEntityInfo cachedCei) {
+ duplicateCdmEntityMap.put(cei, cachedCei);
+ }
+
+ public void addEntityNotInCache(CdmEntityInfo cei) {
+ notInCacheList.add(cei);
+ }
+
+ public List<CdmEntityInfo> getRootElements() {
+ return rootElements;
+ }
+
+ private void print(Map<CdmEntityInfo, CdmEntityInfo> duplicateCdmEntityMap,
+ List<CdmEntityInfo> notInCacheList,
+ CdmBase rootEntity) {
+ System.out.println(toString(duplicateCdmEntityMap, notInCacheList, rootEntity));
+ }
+
+
+ @Override
+ public String toString() {
+ return debugOutput.toString();
+ }
+
+ private String toString(Map<CdmEntityInfo, CdmEntityInfo> duplicateCdmEntityMap,
+ List<CdmEntityInfo> notInCacheList,
+ CdmBase rootEntity) {
+
+
+ StringBuilder sb = new StringBuilder();
+ sb.append(System.getProperty("line.separator"));
+ sb.append("<<< Root Entity " + rootEntity.getUserFriendlyTypeName() + " with id " + rootEntity.getId() + " >>>");
+ sb.append(System.getProperty("line.separator"));
+ if(duplicateCdmEntityMap.isEmpty()) {
+ sb.append("No Duplicate CDM Entities.");
+ } else {
+ sb.append("Duplicate CDM Entities,");
+
+ for (Map.Entry<CdmEntityInfo, CdmEntityInfo> entry : duplicateCdmEntityMap.entrySet())
+ {
+ sb.append(System.getProperty("line.separator"));
+ CdmEntityInfo cei = entry.getKey();
+ CdmBase cb = (CdmBase) cei.getObject();
+
+ sb.append(" - " + cei.getField().getName() + ":" + cb.getUserFriendlyTypeName() + "/" + cb.getId());
+ if(cei.getParent() != null) {
+ Object cbParent = cei.getParent().getObject();
+ sb.append(" in entity " + cbParent.getClass().getCanonicalName());
+ if(cbParent instanceof CdmBase) {
+
+ sb.append(" with id : " + ((CdmBase)cbParent).getId());
+ }
+ }
+ sb.append(System.getProperty("line.separator"));
+ sb.append(" -- entity belongs to cache(s) : " + getCachesContainingEntity(cb));
+ sb.append(System.getProperty("line.separator"));
+
+
+ CdmEntityInfo dupCei = entry.getValue();
+ CdmBase dupCb = (CdmBase) dupCei.getObject();
+
+ String dupCeiFieldName = "";
+ if(dupCei.getField() != null) {
+ dupCeiFieldName = dupCei.getField().getName();
+ }
+ sb.append(" - " + dupCeiFieldName + ":" + dupCb.getUserFriendlyTypeName() + "/" + dupCb.getId());
+ if(dupCei.getParent() != null) {
+ Object dupCbParent = dupCei.getParent().getObject();
+ sb.append(" in entity " + dupCbParent.getClass().getCanonicalName());
+ if(dupCbParent instanceof CdmBase) {
+ sb.append(" with id : " + ((CdmBase)dupCbParent).getId());
+ }
+ }
+ sb.append(System.getProperty("line.separator"));
+ sb.append(" -- entity belongs to cache(s) : " + getCachesContainingEntity(dupCb));
+ sb.append(System.getProperty("line.separator"));
+ sb.append("-----------");
+ }
+ }
+
+ sb.append(System.getProperty("line.separator"));
+ sb.append(System.getProperty("line.separator"));
+
+ if(notInCacheList.isEmpty()) {
+ sb.append("No Entities found which are not in Cache.");
+ } else {
+ sb.append("Not In Cache Entities,");
+
+ for(CdmEntityInfo cei : notInCacheList) {
+ CdmBase cb = (CdmBase) cei.getObject();
+ Object cbParent = cei.getParent().getObject();
+
+ sb.append(System.getProperty("line.separator"));
+
+ String fieldName = "";
+ if(cei.getField() != null) {
+ fieldName = cei.getField().getName();
+ }
+ sb.append(" - " + fieldName + ":" + cb.getUserFriendlyTypeName() + "/" + cb.getId());
+
+ if(cbParent instanceof CdmBase) {
+ sb.append(" of entity " + ((CdmBase)cbParent).getUserFriendlyTypeName());
+ } else {
+ sb.append(" of entity " + cbParent.getClass().getName());
+ }
+ }
+ }
+ sb.append(System.getProperty("line.separator"));
+ return sb.toString();
+ }
+
+ private String getCachesContainingEntity(CdmBase cdmEntity) {
+ Cache defaultCache = CacheManager.create().getCache(CdmCacher.DEFAULT_CACHE_NAME);
+ String caches = "";
+ Element dce = defaultCache.get(cdmEntity.getUuid());
+ if(dce != null && dce.getObjectValue() == cdmEntity) {
+ caches = "{DC}";
+ }
+
+ Object cte = cacher.getFromCache(CdmTransientEntityCacher.generateKey(cdmEntity));
+ if(cte != null && cte == cdmEntity) {
+ caches += "{TC}";
+ }
+ return caches;
+ }
+
+
+ private void debug(CdmBase cdmEntity, boolean recursive) {
+ if(cdmEntity == null) {
+ return;
+ }
+ logger.info("---- starting recursive debug for cdm entity " + cdmEntity.getClass().getName() + " with id " + cdmEntity.getId());
+ List<CdmEntityInfo> alreadyVisitedEntities = new ArrayList<CdmEntityInfo>();
+ CdmEntityInfo cei = new CdmEntityInfo(ProxyUtils.deproxy(cdmEntity));
+ debugRecursive(cdmEntity, alreadyVisitedEntities, cei);
+ rootElements.add(cei);
+ alreadyVisitedEntities.clear();
+ logger.info("---- ending recursive debug for cdm entity " + cdmEntity.getClass().getName() + " with id " + cdmEntity.getId() + "\n");
+ }
+
+ private <T extends Object> void debugRecursive(T obj,
+ List<CdmEntityInfo> alreadyVisitedEntities,
+ CdmEntityInfo cei) {
+ if(obj == null) {
+ return;
+ }
+ if(obj instanceof CdmBase) {
+ debugRecursive((CdmBase)obj, alreadyVisitedEntities, cei);
+ } else if (obj instanceof Map) {
+ debug((Map<T,T>)obj, alreadyVisitedEntities, cei);
+ } else if (obj instanceof Collection) {
+ debug((Collection<T>)obj, alreadyVisitedEntities, cei);
+ }
+
+ logger.info("No caching yet for type " + obj.getClass().getName());
+
+
+ }
+
+ private <T extends Object> void debug(Map<T,T> map,
+ List<CdmEntityInfo> alreadyVisitedEntities,
+ CdmEntityInfo cei) {
+ if(map == null || map.isEmpty()) {
+ return;
+ }
+
+ int originalMapSize = map.size();
+
+ Iterator<Map.Entry<T,T>> iter = map.entrySet().iterator();
+ int i=0;
+ while ( iter.hasNext() ) {
+ Map.Entry<T,T> e = iter.next();
+ CdmEntityInfo childCei = new CdmEntityInfo(e);
+ cei.addChild(childCei);
+
+ CdmEntityInfo keyCei = new CdmEntityInfo(ProxyUtils.deproxy(e.getKey()));
+ childCei.addChild(keyCei);
+ CdmEntityInfo valueCei = new CdmEntityInfo(ProxyUtils.deproxy(e.getValue()));
+ childCei.addChild(valueCei);
+
+ debugRecursive(e.getKey(), alreadyVisitedEntities, keyCei);
+ debugRecursive(e.getValue(), alreadyVisitedEntities, valueCei);
+ }
+ }
+
+ private <T extends Object> void debug(Collection<T> collection,
+ List<CdmEntityInfo> alreadyVisitedEntities,
+ CdmEntityInfo cei) {
+ int length = collection.size();
+ Object[] result = new Object[length];
+ Iterator<T> collectionItr = collection.iterator();
+
+ while(collectionItr.hasNext()) {
+ Object obj = collectionItr.next();
+ CdmEntityInfo childCei = new CdmEntityInfo(ProxyUtils.deproxy(obj));
+ cei.addChild(childCei);
+ debugRecursive(obj, alreadyVisitedEntities, childCei);
+
+ }
+
+ }
+
+ private void debugRecursive(CdmBase cdmEntity,
+ List<CdmEntityInfo> alreadyVisitedEntities,
+ CdmEntityInfo cei) {
+
+ CdmBase cachedCdmEntityInSubGraph = null;
+
+ if(cei.getObject() instanceof CdmBase) {
+ CdmBase cb = (CdmBase)cei.getObject();
+ cachedCdmEntityInSubGraph = cacher.getFromCache(cb);
+ if(cachedCdmEntityInSubGraph != cb) {
+ // found a cdm entity which is not in cache - need to record this
+ //logger.info(" - found entity not in cache " + fieldName + "' in object of type " + clazz.getName() + " with id " + cdmEntity.getId());
+ addEntityNotInCache(cei);
+ }
+ }
+
+
+ // we want to recursive through the cdmEntity (and not the cachedCdmEntity)
+ // since there could be new or deleted objects in the cdmEntity sub-graph
+
+ // start by getting the fields from the cdm entity
+ String className = cdmEntity.getClass().getName();
+ CdmModelFieldPropertyFromClass cmgmfc = cacher.getFromCdmlibModelCache(className);
+ if(cmgmfc != null) {
+ alreadyVisitedEntities.add(cei);
+ List<String> fields = cmgmfc.getFields();
+ for(String field : fields) {
+ // retrieve the actual object corresponding to the field.
+ // this object will be either a CdmBase or a Collection / Map
+ // with CdmBase as the generic type
+ String f = field;
+ CdmEntityInfo childCei = getDebugCdmBaseTypeFieldValue(cdmEntity, field, alreadyVisitedEntities, cei);
+ if(!childCei.isProxy()) {
+ Object object = childCei.getObject();
+ if(object != null && object instanceof CdmBase) {
+ CdmBase cdmEntityInSubGraph = (CdmBase)object;
+ if(!containsIdenticalCdmEntity(alreadyVisitedEntities, cdmEntityInSubGraph)) {
+ logger.info("recursive debugging object of type " + cdmEntityInSubGraph.getClass().getName() + " with id " + cdmEntityInSubGraph.getId());
+ debugRecursive(cdmEntityInSubGraph, alreadyVisitedEntities, childCei);
+ } else {
+ logger.info("object of type " + cdmEntityInSubGraph.getClass().getName() + " with id " + cdmEntityInSubGraph.getId() + " already visited");
+ }
+ }
+ }
+ }
+ } else {
+ throw new CdmClientCacheException("CdmEntity with class " + cdmEntity.getClass().getName() + " is not found in the cdmlib model cache. " +
+ "The cache may be corrupted or not in sync with the latest model version" );
+ }
+
+ }
+
+
+ private CdmEntityInfo getDebugCdmBaseTypeFieldValue(CdmBase cdmEntity,
+ String fieldName,
+ List<CdmEntityInfo> alreadyVisitedEntities,
+ CdmEntityInfo cei) {
+
+ CdmEntityInfo childCei = null;
+ Class<?> clazz = cdmEntity.getClass();
+ try {
+ // this call will search in the provided class as well as
+ // the super classes until it finds the field
+ Field field = ReflectionUtils.findField(clazz, fieldName);
+
+ if(field == null) {
+ throw new CdmClientCacheException("Field '" + fieldName
+ + "' not found when searching in class '" + clazz.getName() + "' and its supercalsses");
+ }
+ field.setAccessible(true);
+ Object o = field.get(cdmEntity);
+ o = ProxyUtils.deproxy(o);
+ CdmBase cdmEntityInSubGraph = null;
+
+ boolean isHibernateProxy = false;
+ boolean isPersistentCollection = false;
+
+ childCei = new CdmEntityInfo(o);
+ cei.addChild(childCei);
+ childCei.setField(field);
+
+ if(o != null) {
+ boolean isProxy = ProxyUtils.isProxy(o);
+
+ childCei.setProxy(isProxy);
+ if(!isProxy) {
+ childCei.setObject(o);
+ if(CdmBase.class.isAssignableFrom(o.getClass())) {
+ logger.info("found initialised cdm entity '" + fieldName + "' in object of type " + clazz.getName() + " with id " + cdmEntity.getId());
+ cdmEntityInSubGraph = (CdmBase)o;
+
+ //logger.info(" - found duplicate entity at " + fieldName + "' in object of type " + clazz.getName() + " with id " + cdmEntity.getId());
+ CdmEntityInfo dupCei = getDuplicate(alreadyVisitedEntities, cdmEntityInSubGraph);
+ if(dupCei != null) {
+ addDuplicateEntity(childCei, dupCei);
+ }
+
+ } else if(o instanceof Map) {
+ debugRecursive((Map)o, alreadyVisitedEntities, childCei);
+ } else if(o instanceof Collection) {
+ debugRecursive((Collection)o, alreadyVisitedEntities, childCei);
+ }
+
+ }
+ }
+ // we return the original cdm entity in the sub graph because we
+ // want to continue to recurse on the input cdm entity graph
+ // and not the one in the cache
+
+ return childCei;
+ } catch (SecurityException e) {
+ throw new CdmClientCacheException(e);
+ } catch (IllegalArgumentException e) {
+ throw new CdmClientCacheException(e);
+ } catch (IllegalAccessException e) {
+ throw new CdmClientCacheException(e);
+ }
+ }
+
+
+ private CdmEntityInfo getDuplicate(List<CdmEntityInfo> alreadyVisitedEntities, Object objectToCompare) {
+ if(objectToCompare != null ) {
+ for(CdmEntityInfo cei: alreadyVisitedEntities) {
+ if(objectToCompare.equals(cei.getObject()) && objectToCompare != cei.getObject()) {
+ return cei;
+ }
+ }
+ }
+ return null;
+ }
+
+ private boolean containsIdenticalCdmEntity(List<CdmEntityInfo> ceiSet, Object objectToCompare) {
+ boolean foundIdentical = false;
+ if(objectToCompare != null) {
+ for(CdmEntityInfo cei : ceiSet) {
+ if(cei.getObject() == objectToCompare) {
+ foundIdentical = true;
+ } else if(objectToCompare.equals(cei.getObject())) {
+ return false;
+ }
+ }
+ }
+ return foundIdentical;
+ }
+
+ public class CdmEntityInfo {
+
+ private Object object;
+ private CdmEntityInfo parent;
+ private List<CdmEntityInfo> children;
+ private Field field;
+ private String label;
+ private boolean isProxy;
+
+ public CdmEntityInfo(Object object) {
+ this.object = object;
+ isProxy = false;
+ children = new ArrayList<CdmEntityInfo>();
+ }
+
+ public CdmEntityInfo getParent() {
+ return parent;
+ }
+
+ public void setParent(CdmEntityInfo parent) {
+ this.parent = parent;
+ }
+
+ public List<CdmEntityInfo> getChildren() {
+ return children;
+ }
+
+ public void setChildren(List<CdmEntityInfo> children) {
+ this.children = children;
+ }
+
+ public void addChild(CdmEntityInfo cei) {
+ this.children.add(cei);
+ cei.setParent(this);
+ }
+
+ public Field getField() {
+ return field;
+ }
+
+ public void setField(Field field) {
+ this.field = field;
+ }
+
+
+ public String getLabel() {
+ String label;
+ String fieldName = "";
+ if(field != null) {
+ fieldName = field.getName();
+ }
+
+ if(object != null) {
+ String className = object.getClass().getName();
+ if(object instanceof HibernateProxy) {
+ LazyInitializer hli = ((HibernateProxy)object).getHibernateLazyInitializer();
+ if(hli.isUninitialized()) {
+ className = "HibernateProxy";
+ } else {
+ className = "InitialisedHibernateProxy";
+ }
+ label = "[" + className + "] " + fieldName;
+ } else if(object instanceof PersistentCollection) {
+ PersistentCollection pc = ((PersistentCollection)object);
+ if(!pc.wasInitialized()) {
+ className = "PersistentCollection";
+ } else {
+ className = "InitialisedPersistentCollection";
+ }
+ label = "[" + className + "] " + fieldName;
+ } else if(object instanceof Collection) {
+ label = "[" + className + "] " + fieldName + " : " + String.valueOf(((Collection)object).size());
+ } else if(object instanceof Map) {
+ label = "[" + className + "] " + fieldName + " : " + String.valueOf(((Map)object).size());
+ } else if(object instanceof CdmBase) {
+ label = getCachesContainingEntity((CdmBase)object) + "[" + className + ",id" + ((CdmBase)object).getId() + "] " + fieldName + " : " + object.toString();
+ } else {
+ label = "[" + className + "] " + fieldName + " : " + object.toString();
+ }
+ } else {
+ label = "[NULL] " + fieldName;
+ }
+ return label;
+ }
+
+ public void setLabel(String label) {
+ this.label = label;
+ }
+
+ public Object getObject() {
+ return object;
+ }
+
+ public void setObject(Object object) {
+ this.object = object;
+ }
+
+ public boolean isProxy() {
+ return isProxy;
+ }
+
+ public void setProxy(boolean isProxy) {
+ this.isProxy = isProxy;
+ }
+
+
+
+ }
+
+}
--- /dev/null
+// $Id$
+/**
+* Copyright (C) 2015 EDIT
+* European Distributed Institute of Taxonomy
+* http://www.e-taxonomy.eu
+*
+* The contents of this file are subject to the Mozilla Public License Version 1.1
+* See LICENSE.TXT at the top of this package for the full license terms.
+*/
+package eu.etaxonomy.taxeditor.remoting.cache;
+
+import java.lang.reflect.Field;
+import java.util.ArrayList;
+import java.util.HashMap;
+import java.util.HashSet;
+import java.util.List;
+import java.util.Map;
+import java.util.Set;
+import java.util.TreeMap;
+import java.util.TreeSet;
+import java.util.UUID;
+
+import org.hibernate.collection.internal.PersistentBag;
+import org.hibernate.collection.internal.PersistentList;
+import org.hibernate.collection.internal.PersistentMap;
+import org.hibernate.collection.internal.PersistentSet;
+import org.hibernate.collection.internal.PersistentSortedMap;
+import org.hibernate.collection.internal.PersistentSortedSet;
+import org.hibernate.collection.spi.PersistentCollection;
+import org.hibernate.proxy.HibernateProxy;
+import org.hibernate.proxy.LazyInitializer;
+import org.springframework.util.ReflectionUtils;
+
+import eu.etaxonomy.cdm.api.application.CdmApplicationState;
+import eu.etaxonomy.cdm.model.common.CdmBase;
+import eu.etaxonomy.cdm.model.common.PersistentMultiLanguageText;
+import eu.etaxonomy.taxeditor.remoting.CdmRemotingException;
+
+/**
+ * @author cmathew
+ * @date 17 Feb 2015
+ *
+ */
+public class ProxyUtils {
+
+
+
+ public static enum CollectionType {
+ SET,
+ LIST,
+ MAP;
+
+ @Override
+ public String toString() {
+ return this.name().toLowerCase();
+ }
+ }
+
+ public static Object getCollectionType(Object obj) {
+ if(obj != null) {
+ if(obj instanceof List) {
+ return CollectionType.LIST;
+ }
+ if(obj instanceof Set) {
+ return CollectionType.SET;
+ }
+ if(obj instanceof Map) {
+ return CollectionType.MAP;
+ }
+ throw new CdmRemotingException("Cannot get Collection Type for " + obj.getClass().getName());
+ }
+ return null;
+ }
+
+ public static Object getObject(PersistentCollection pc) {
+ if(pc != null) {
+ if(pc instanceof PersistentSet) {
+ return new HashSet((Set)pc);
+ }
+ if(pc instanceof PersistentSortedSet) {
+ return new TreeSet((Set)pc);
+ }
+ if(pc instanceof PersistentList || pc instanceof PersistentBag) {
+ return new ArrayList((List)pc);
+ }
+ if(pc instanceof PersistentMap || pc instanceof PersistentMultiLanguageText) {
+ return new HashMap((Map)pc);
+ }
+ if(pc instanceof PersistentSortedMap) {
+ return new TreeMap((Map)pc);
+ }
+ throw new CdmRemotingException("Cannot get Collection field for type " + pc.getClass().getName());
+ }
+ return null;
+ }
+
+ public static CollectionField getCollectionField(PersistentCollection pc) {
+ if(pc != null) {
+ if(pc instanceof PersistentSet) {
+ return new CollectionField(new HashSet((Set)pc), CollectionType.SET);
+ }
+ if(pc instanceof PersistentSortedSet) {
+ return new CollectionField(new TreeSet((Set)pc), CollectionType.SET);
+ }
+ if(pc instanceof PersistentList) {
+ return new CollectionField(new ArrayList((List)pc), CollectionType.LIST);
+ }
+ if(pc instanceof PersistentMap || pc instanceof PersistentMultiLanguageText) {
+ return new CollectionField(new HashMap((Map)pc), CollectionType.MAP);
+ }
+ if(pc instanceof PersistentSortedMap) {
+ return new CollectionField(new TreeMap((Map)pc), CollectionType.MAP);
+ }
+ throw new CdmRemotingException("Cannot get Collection field for type " + pc.getClass().getName());
+ }
+ return null;
+ }
+
+ public static class CollectionField {
+ private final Object col;
+ private final CollectionType type;
+ public CollectionField(Object col, CollectionType type) {
+ this.col = col;
+ this.type = type;
+ }
+
+ public Object getCollection() {
+ return this.col;
+ }
+
+ public CollectionType getType() {
+ return this.type;
+ }
+ }
+
+
+ public static Object deproxy(Object o) {
+ if(o != null && o instanceof HibernateProxy) {
+ LazyInitializer hli = ((HibernateProxy)o).getHibernateLazyInitializer();
+ if(!hli.isUninitialized()) {
+ return hli.getImplementation();
+
+ }
+ }
+
+ if(o != null && o instanceof PersistentCollection) {
+ PersistentCollection pc = ((PersistentCollection)o);
+ if(pc.wasInitialized()) {
+ return ProxyUtils.getObject(pc);
+
+ }
+ }
+ return o;
+ }
+
+ public static boolean isProxy(Object o) {
+ if(o != null && o instanceof HibernateProxy) {
+ LazyInitializer hli = ((HibernateProxy)o).getHibernateLazyInitializer();
+ if(hli.isUninitialized()) {
+ return true;
+ }
+ }
+
+ if(o != null && o instanceof PersistentCollection) {
+ PersistentCollection pc = ((PersistentCollection)o);
+ if(!pc.wasInitialized()) {
+ return true;
+ }
+ }
+
+ return false;
+ }
+
+ public static Object remoteLoadPersistentCollectionIfProxy(Object o, UUID ownerUuid, String fieldName) throws ClassNotFoundException {
+ if(o != null && o instanceof HibernateProxy) {
+ LazyInitializer hli = ((HibernateProxy)o).getHibernateLazyInitializer();
+ if(hli.isUninitialized()) {
+ return CdmApplicationState.getCachedCommonService().find((Class<CdmBase>)Class.forName(hli.getEntityName()),
+ ((Integer)hli.getIdentifier()).intValue());
+ }
+ }
+
+ if(o != null && o instanceof PersistentCollection) {
+ PersistentCollection pc = ((PersistentCollection)o);
+ if(!pc.wasInitialized()) {
+ return CdmApplicationState.getCachedCommonService().initializeCollection(ownerUuid, fieldName);
+ }
+ }
+
+ return o;
+ }
+
+
+
+
+ public static void setRoleValueInOwner(Object owner, String role, Object value) {
+ if(role == null || role.isEmpty()) {
+ throw new CdmRemotingException("Role cannot be null or an empty string");
+ }
+
+ String fieldName = role.substring(role.lastIndexOf(".") + 1);
+
+ Field field = ReflectionUtils.findField(owner.getClass(), fieldName);
+
+ if(field == null) {
+ throw new CdmRemotingException("Field '" + fieldName
+ + "' not found when searching in class '" + owner.getClass() + "' and its supercalsses");
+ }
+
+ field.setAccessible(true);
+
+ try {
+ field.set(owner, value);
+ } catch (IllegalArgumentException e) {
+ throw new CdmRemotingException(e);
+ } catch (IllegalAccessException e) {
+ throw new CdmRemotingException(e);
+ }
+ }
+
+}
--- /dev/null
+// $Id$
+/**
+* Copyright (C) 2014 EDIT
+* European Distributed Institute of Taxonomy
+* http://www.e-taxonomy.eu
+*
+* The contents of this file are subject to the Mozilla Public License Version 1.1
+* See LICENSE.TXT at the top of this package for the full license terms.
+*/
+package eu.etaxonomy.taxeditor.remoting.server;
+
+/**
+ * @author cmathew
+ * @date 23 Sep 2014
+ *
+ */
+public class CDMServerException extends Exception {
+
+ public CDMServerException(String message) {
+ super(message);
+ }
+
+ public CDMServerException(Exception e) {
+ super(e);
+ }
+
+ public CDMServerException(String message,Exception e) {
+ super(message,e);
+ }
+
+}
/**
* Copyright (C) 2014 EDIT
-* European Distributed Institute of Taxonomy
+* European Distributed Institute of Taxonomy
* http://www.e-taxonomy.eu
-*
+*
* The contents of this file are subject to the Mozilla Public License Version 1.1
* See LICENSE.TXT at the top of this package for the full license terms.
*/
-package eu.etaxonomy.cdm.remote;
+package eu.etaxonomy.taxeditor.remoting.source;
import static eu.etaxonomy.cdm.common.XmlHelp.getBeansRoot;
import static eu.etaxonomy.cdm.common.XmlHelp.insertXmlBean;
import eu.etaxonomy.cdm.common.XmlHelp;
import eu.etaxonomy.cdm.config.CdmPersistentSourceUtils;
import eu.etaxonomy.cdm.config.CdmPersistentXMLSource;
-import eu.etaxonomy.cdm.config.CdmSourceException;
-import eu.etaxonomy.cdm.config.ICdmPersistentSource;
import eu.etaxonomy.cdm.config.CdmPersistentXMLSource.CdmSourceProperties;
-import eu.etaxonomy.cdm.database.CdmDataSource;
-import eu.etaxonomy.cdm.database.CdmPersistentDataSource;
-import eu.etaxonomy.cdm.database.DataSourceNotFoundException;
-import eu.etaxonomy.cdm.database.DatabaseTypeEnum;
-import eu.etaxonomy.cdm.database.ICdmDataSource;
-import eu.etaxonomy.cdm.database.types.IDatabaseType;
+import eu.etaxonomy.cdm.config.ICdmPersistentSource;
import eu.etaxonomy.cdm.model.name.NomenclaturalCode;
/**
*/
public class CdmPersistentRemoteSource extends CdmRemoteSourceBase implements ICdmPersistentSource{
private static final Logger logger = Logger.getLogger(CdmPersistentRemoteSource.class);
-
+
public static final String REMOTESOURCE_BEAN_POSTFIX = "RemoteSource";
private String beanName;
private Properties cdmSourceProperties;
private List<Attribute> cdmSourceAttributes;
-
+
/**
* Creates a new instance of CdmPersistentRemoteSource
- *
+ *
* @param name
* @param server
* @param port
* @param contextPath
* @param nomenclaturalCode
* @return
- * @throws CdmRemoteSourceException
+ * @throws CdmRemoteSourceException
*/
public static CdmPersistentRemoteSource NewInstance(String remoteSource) throws CdmRemoteSourceException {
if(exists(remoteSource)) {
} else {
throw new CdmRemoteSourceException("Remote source '" + remoteSource + "' does not exist in sources setting file");
}
-
+
}
-
+
/**S
* Creates a new CdmPersistentRemoteSource
- *
+ *
* @param name
* @param server
* @param port
* @param contextPath
* @param nomenclaturalCode
- * @throws CdmRemoteSourceException
+ * @throws CdmRemoteSourceException
*/
- private CdmPersistentRemoteSource(String remoteSource) throws CdmRemoteSourceException {
-
+ private CdmPersistentRemoteSource(String remoteSource) throws CdmRemoteSourceException {
+
CdmPersistentXMLSource cdmPersistentXMLSource = CdmPersistentXMLSource.NewInstance(remoteSource, REMOTESOURCE_BEAN_POSTFIX);
if(cdmPersistentXMLSource.getElement() != null) {
beanName = cdmPersistentXMLSource.getBeanName();
- // properties from the persistent xml file
+ // properties from the persistent xml file
cdmSourceProperties = cdmPersistentXMLSource.getCdmSourceProperties();
cdmSourceAttributes = cdmPersistentXMLSource.getCdmSourceAttributes();
checkProperties(cdmSourceProperties);
} else {
throw new CdmRemoteSourceException("Remote source '" + remoteSource + "' does not exist in settings file");
- }
+ }
initDatabaseConnection();
}
-
+
private static void checkProperties(Properties cdmSourceProperties) throws CdmRemoteSourceException {
if(!cdmSourceProperties.containsKey(CdmSourceProperties.SERVER.toString())) {
- throw new CdmRemoteSourceException("Could not initialise remote source. Required property '" + CdmSourceProperties.SERVER.toString() + "' is missing");
+ throw new CdmRemoteSourceException("Could not initialise remote source. Required property '" + CdmSourceProperties.SERVER.toString() + "' is missing");
}
String port = (String)cdmSourceProperties.get(CdmSourceProperties.PORT.toString());
if(port == null || port.isEmpty()) {
- throw new CdmRemoteSourceException("Could not initialise remote source. Required property '" + CdmSourceProperties.SERVER.toString() + "' is missing");
- }
+ throw new CdmRemoteSourceException("Could not initialise remote source. Required property '" + CdmSourceProperties.SERVER.toString() + "' is missing");
+ }
if(!cdmSourceProperties.containsKey(CdmSourceProperties.CONTEXTPATH.toString())) {
- throw new CdmRemoteSourceException("Could not initialise remote source. Required property '" + CdmSourceProperties.SERVER.toString() + "' is missing");
- }
+ throw new CdmRemoteSourceException("Could not initialise remote source. Required property '" + CdmSourceProperties.SERVER.toString() + "' is missing");
+ }
// default NomenclaturalCode is always ICNAFP
- if(!cdmSourceProperties.containsKey(CdmSourceProperties.NOMENCLATURAL_CODE.toString())) {
+ if(!cdmSourceProperties.containsKey(CdmSourceProperties.NOMENCLATURAL_CODE.toString())) {
cdmSourceProperties.put(CdmSourceProperties.NOMENCLATURAL_CODE.toString(), NomenclaturalCode.ICNAFP.name());
- }
+ }
}
/* (non-Javadoc)
public String getBeanName() {
return beanName;
}
-
+
@Override
public String getServer() {
return cdmSourceProperties.getProperty(CdmSourceProperties.SERVER.toString());
}
-
+
@Override
public int getPort() {
String port = CdmUtils.Nz(cdmSourceProperties.getProperty(CdmSourceProperties.PORT.toString()));
return Integer.valueOf(port);
}
}
-
+
@Override
public String getContextPath() {
return cdmSourceProperties.getProperty(CdmSourceProperties.CONTEXTPATH.toString());
}
-
+
@Override
public NomenclaturalCode getNomenclaturalCode() {
return NomenclaturalCode.fromString(cdmSourceProperties.getProperty(CdmSourceProperties.NOMENCLATURAL_CODE.toString()));
}
-
+
public static CdmPersistentRemoteSource save(String strRemoteSourceName, ICdmRemoteSource remoteSource) throws CdmRemoteSourceException {
Properties cdmSourceProperties = new Properties();
cdmSourceProperties.put(CdmSourceProperties.SERVER.toString(), remoteSource.getServer());
checkProperties(cdmSourceProperties);
return save(strRemoteSourceName, cdmSourceProperties);
}
-
+
private static CdmPersistentRemoteSource save(String strRemoteSourceName,Properties cdmSourceProperties) throws CdmRemoteSourceException {
//root
}
//save
- saveToXml(root.getDocument(),
- CdmPersistentSourceUtils.getResourceDirectory(),
- CdmPersistentXMLSource.CDMSOURCE_FILE_NAME,
+ saveToXml(root.getDocument(),
+ CdmPersistentSourceUtils.getResourceDirectory(),
+ CdmPersistentXMLSource.CDMSOURCE_FILE_NAME,
XmlHelp.prettyFormat );
return NewInstance(strRemoteSourceName) ;
}
-
+
/**
* @param strDataSourceName
* @param dataSource
- * @param code
+ * @param code
* @return
* the updated dataSource, null if not succesful
*/
CdmPersistentSourceUtils.delete(CdmPersistentSourceUtils.getBeanName(strRemoteSourceName,REMOTESOURCE_BEAN_POSTFIX));
return save(strRemoteSourceName, remoteSource);
}
-
+
/**
* Tests existing of the datsource in the according config file.
* @return true if a datasource with the given name exists in the according datasource config file.
Element bean = CdmPersistentSourceUtils.getCdmSourceBeanXml(strRemoteSourceName, REMOTESOURCE_BEAN_POSTFIX);
return (bean != null);
}
-
+
/**
* Returns a list of all datasources stored in the datasource config file
* @return all existing data sources
- * @throws CdmRemoteSourceException
+ * @throws CdmRemoteSourceException
*/
@SuppressWarnings("unchecked")
static public List<CdmPersistentRemoteSource> getAllRemoteSources() throws CdmRemoteSourceException{
List<CdmPersistentRemoteSource> remoteSources = new ArrayList<CdmPersistentRemoteSource>();
-
+
Element root = getBeansRoot(CdmPersistentSourceUtils.getCdmSourceInputStream());
if (root == null){
return null;
}else{
List<Element> lsChildren = root.getChildren("bean", root.getNamespace());
-
+
for (Element elBean : lsChildren){
String strId = elBean.getAttributeValue("id");
if (strId != null && strId.endsWith(REMOTESOURCE_BEAN_POSTFIX)){
}
return remoteSources;
}
-
+
@Override
public String toString(){
if (getName() != null){
* The contents of this file are subject to the Mozilla Public License Version 1.1
* See LICENSE.TXT at the top of this package for the full license terms.
*/
-package eu.etaxonomy.cdm.remote;
+package eu.etaxonomy.taxeditor.remoting.source;
import eu.etaxonomy.cdm.model.name.NomenclaturalCode;
/**
* Copyright (C) 2014 EDIT
-* European Distributed Institute of Taxonomy
+* European Distributed Institute of Taxonomy
* http://www.e-taxonomy.eu
-*
+*
* The contents of this file are subject to the Mozilla Public License Version 1.1
* See LICENSE.TXT at the top of this package for the full license terms.
*/
-package eu.etaxonomy.cdm.remote;
+package eu.etaxonomy.taxeditor.remoting.source;
import java.util.Map;
import org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean;
-import eu.etaxonomy.cdm.api.service.IDatabaseService;
+import eu.etaxonomy.cdm.api.service.IUserService;
import eu.etaxonomy.cdm.config.CdmSource;
import eu.etaxonomy.cdm.config.CdmSourceException;
-import eu.etaxonomy.cdm.database.DatabaseTypeEnum;
import eu.etaxonomy.cdm.model.metadata.CdmMetaData.MetaDataPropertyName;
import eu.etaxonomy.cdm.model.name.NomenclaturalCode;
/**
- * Base class representing a CDM remote source.
+ * Base class representing a CDM remote source.
* This class handles all the configuration relating to the remoting aspect of
* a CDM source.
*
protected static final NomenclaturalCode DEFAULT_NOMENCLATURAL_CODE = NomenclaturalCode.ICNAFP;
private String contextPath;
private String baseUrl;
-
- private IDatabaseService databaseService;
-
+
+ private IUserService userService;
+
/**
* Constructs a CdmRemoteSourceBase object with default values.
- *
+ *
*/
protected CdmRemoteSourceBase() {
setName(DEFAULT_NAME);
setContextPath(DEFAULT_CONTEXT_PATH);
setNomenclaturalCode(DEFAULT_NOMENCLATURAL_CODE);
}
-
+
/**
* Constructs a CdmRemoteSourceBase
- *
+ *
* @param name
* @param server
* @param port
* @param contextPath
* @param nomenclaturalCode
*/
- protected CdmRemoteSourceBase(String name, String server, int port, String contextPath, NomenclaturalCode nomenclaturalCode) {
+ public CdmRemoteSourceBase(String name, String server, int port, String contextPath, NomenclaturalCode nomenclaturalCode) {
setName(name);
setServer(server);
setPort(port);
setContextPath(contextPath);
- setNomenclaturalCode(nomenclaturalCode);
+ setNomenclaturalCode(nomenclaturalCode);
initDatabaseConnection();
}
-
+
protected void initDatabaseConnection() {
if(getContextPath() == null || getContextPath().equals("")) {
setBaseUrl("http://" + getServer() + ":" + String.valueOf(getPort()));
} else {
setBaseUrl("http://" + getServer() + ":" + String.valueOf(getPort()) + "/" + getContextPath());
- }
+ }
// the database service needs to be initialised (before the spring
- // application context initialsation) since it is required to
+ // application context initialsation) since it is required to
// to make queries related to the source database
HttpInvokerProxyFactoryBean proxy = new HttpInvokerProxyFactoryBean();
- proxy.setServiceInterface(IDatabaseService.class);
- proxy.setServiceUrl(baseUrl + "/remoting/database.service");
+ proxy.setServiceInterface(IUserService.class);
+ // FIXME:Remoting need to fix this hardcoded url and make it configurable somehow
+ proxy.setServiceUrl(baseUrl + "/remoting-public/user.service");
proxy.afterPropertiesSet();
- databaseService = (IDatabaseService) proxy.getObject();
+ userService = (IUserService) proxy.getObject();
}
-
+
/* (non-Javadoc)
* @see eu.etaxonomy.cdm.remote.ICdmRemoteSource#getBaseUrl()
*/
}
/**
- * Sets the base url for the http-invoker services as listed in
+ * Sets the base url for the http-invoker services as listed in
* httpInvokerServicesClients.xml.
- * e.g. for 'http://127.0.0.1:8080/col/remoting/common.service', the
+ * e.g. for 'http://127.0.0.1:8080/col/remoting/common.service', the
* base url would be 'http://127.0.0.1:8080/col'
- *
+ *
* @param baseUrl
*/
public void setBaseUrl(String baseUrl) {
/**
* Sets the context path.
- * e.g. for 'http://127.0.0.1:8080/col/remoting/common.service', the
+ * e.g. for 'http://127.0.0.1:8080/col/remoting/common.service', the
* context path would be 'col'
- *
+ *
* @param contextPath
*/
public void setContextPath(String contextPath) {
*/
@Override
public String getDbSchemaVersion() throws CdmSourceException {
- return databaseService.getDbSchemaVersion();
+ return userService.getDbSchemaVersion();
}
*/
@Override
public boolean isDbEmpty() throws CdmSourceException {
- return databaseService.isDbEmpty();
+ return userService.isDbEmpty();
}
*/
@Override
public boolean checkConnection() throws CdmSourceException {
- // assuming that database service works implies
+ // assuming that database service works implies
// the connection is up
- // if no exception is thrown then we assume that the
+ // if no exception is thrown then we assume that the
// connection is up
// FIXME:Remoting is this really correct?
- databaseService.getDbSchemaVersion();
+ userService.getDbSchemaVersion();
return true;
}
*/
@Override
public String getConnectionMessage() {
- return "Conncting to Remote CDM Server " + getName();
+ return "Connecting to Remote CDM Instance " + getName() + ":" + getPort() + "/" + getContextPath();
}
-
+
@Override
public Map<MetaDataPropertyName, String> getMetaDataMap() throws CdmSourceException {
- return databaseService.getCdmMetadataMap();
+ return userService.getCdmMetadataMap();
}
/**
*
*/
-package eu.etaxonomy.cdm.remote;
+package eu.etaxonomy.taxeditor.remoting.source;
/**
*
--- /dev/null
+// $Id$
+/**
+ * Copyright (C) 2015 EDIT
+ * European Distributed Institute of Taxonomy
+ * http://www.e-taxonomy.eu
+ *
+ * The contents of this file are subject to the Mozilla Public License Version 1.1
+ * See LICENSE.TXT at the top of this package for the full license terms.
+ */
+package eu.etaxonomy.taxeditor.remoting.source;
+
+import java.io.IOException;
+import java.net.Socket;
+import java.util.ArrayList;
+import java.util.Collections;
+import java.util.Comparator;
+import java.util.List;
+
+import org.apache.commons.lang.StringUtils;
+import org.apache.http.HttpEntity;
+import org.apache.http.HttpResponse;
+import org.apache.http.client.ClientProtocolException;
+import org.apache.http.client.HttpClient;
+import org.apache.http.client.ResponseHandler;
+import org.apache.http.client.methods.HttpGet;
+import org.apache.http.impl.client.DefaultHttpClient;
+import org.apache.http.params.HttpConnectionParams;
+import org.apache.http.params.HttpParams;
+import org.apache.http.util.EntityUtils;
+import org.apache.log4j.Logger;
+import org.json.JSONArray;
+import org.json.JSONException;
+import org.json.JSONObject;
+
+import eu.etaxonomy.cdm.api.application.CdmApplicationState;
+import eu.etaxonomy.cdm.config.CdmSourceException;
+import eu.etaxonomy.cdm.database.CdmPersistentDataSource;
+import eu.etaxonomy.cdm.database.ICdmDataSource;
+import eu.etaxonomy.cdm.model.metadata.CdmMetaData;
+import eu.etaxonomy.taxeditor.remoting.server.CDMServerException;
+
+/**
+ * @author cmathew
+ * @date 20 Jan 2015
+ *
+ */
+public class CdmServerInfo {
+ public static final Logger logger = Logger.getLogger(CdmServerInfo.class);
+
+ private final static String CDMSERVER_PREFIX = "cdmserver";
+ private final static String NAME_PRODUCTION = "edit-production";
+ private final static String SERVER_PRODUCTION = "dev.e-taxonomy.eu";
+
+ private final static String NAME_INTEGRATION = "edit-integration";
+ private final static String SERVER_INTEGRATION = "int.e-taxonomy.eu";
+
+ private final static String NAME_DEMO_1 = "edit-WS I";
+ private final static String SERVER_DEMO_1 = "160.45.63.230";
+
+ private final static String NAME_DEMO_2 = "edit-WS II";
+ private final static String SERVER_DEMO_2 = "160.45.63.231";
+
+ private final static String NAME_TEST = "edit-test";
+ private final static String SERVER_TEST = "test.e-taxonomy.eu";
+
+ public final static String SERVER_LOCALHOST = "localhost";
+ private final static String NAME_LOCALHOST = "localhost";
+ public final static String NAME_LOCALHOST_MGD = "localhost mgd.";
+
+ private final static String NAME_LOCALHOST_DEV = "localhost-dev";
+ private final static String NAME_INSTANCE_LOCALHOST_DEV = "local-dev";
+ private final static String SERVER_LOCALHOST_DEV = "localhost";
+ private final static int PORT_LOCALHOST_DEV = 8080;
+ private final static String BASEPATH_LOCALHOST_DEV = "";
+
+ private final String name;
+ private final String server;
+ private final int port;
+ private final List<CdmInstanceInfo> instances;
+
+ private static List<CdmServerInfo> cdmServerInfoList;
+
+ private String cdmlibServicesVersion = "";
+ private String cdmlibServicesLastModified = "";
+
+
+ public CdmServerInfo(String name, String server, int port) {
+ this.name = name;
+ this.server = server;
+ this.port = port;
+ instances = new ArrayList<CdmInstanceInfo>();
+
+ }
+
+
+ public CdmInstanceInfo addInstance(String name, String basePath) {
+ CdmInstanceInfo cii = new CdmInstanceInfo(name, basePath);
+ instances.add(cii);
+ return cii;
+
+ }
+
+ public boolean isLocalhost() {
+ return name.startsWith(SERVER_LOCALHOST);
+ }
+
+ public boolean isLocalhostMgd() {
+ return NAME_LOCALHOST_MGD.equals(name);
+ }
+
+ public String getCdmlibServicesVersion() {
+ return cdmlibServicesVersion;
+ }
+
+ public String getCdmlibLastModified() {
+ return cdmlibServicesLastModified;
+ }
+
+ public void refreshInstances() throws CDMServerException {
+ instances.clear();
+ if(isLocalhostMgd()) {
+ addInstancesFromDataSourcesConfig();
+ } else {
+ addInstancesViaHttp();
+ }
+ Collections.sort(instances, new Comparator<CdmInstanceInfo>() {
+ @Override
+ public int compare(CdmInstanceInfo cii1, CdmInstanceInfo cii2)
+ {
+ return cii1.getName().toString().compareTo(cii2.getName().toString());
+ }
+ });
+ }
+
+ public void updateInfo() throws CDMServerException {
+ String url = "http://" + server + ":" + String.valueOf(port) + "/" + CDMSERVER_PREFIX + "/info.jsp";
+ String responseBody = getResponse(url);
+ if(responseBody != null) {
+ try {
+ JSONObject info = new JSONObject(responseBody);
+ cdmlibServicesVersion = info.getString("cdmlibServicesVersion");
+ cdmlibServicesLastModified = info.getString("cdmlibServicesLastModified");
+ } catch (JSONException e) {
+ throw new CDMServerException(e);
+ }
+ }
+ }
+
+ public void addInstancesViaHttp() throws CDMServerException {
+ updateInfo();
+ String url = "http://" + server + ":" + String.valueOf(port) + "/" + CDMSERVER_PREFIX + "/instances.jsp";
+ String responseBody = getResponse(url);
+ if(responseBody != null) {
+ try {
+ JSONArray array = new JSONArray(responseBody);
+ for(int i=0;i<array.length();i++) {
+ JSONObject instance = (JSONObject)array.get(i);
+ if(instance != null) {
+ JSONObject conf = (JSONObject)instance.get("configuration");
+ if(conf != null) {
+ String instanceName = conf.getString("instanceName");
+ // we need to remove the first (char) forward slash from
+ // the base path
+ String basePath = conf.getString("basePath").substring(1);
+ addInstance(instanceName, basePath);
+ logger.info("Added instance with name : " + instanceName + ", basePath : " + basePath);
+ }
+ }
+ }
+ } catch (JSONException e) {
+ throw new CDMServerException(e);
+ }
+ }
+ }
+
+ private String getResponse(String url) throws CDMServerException {
+ HttpClient client = new DefaultHttpClient();
+ HttpParams params = client.getParams();
+
+ HttpConnectionParams.setConnectionTimeout(params, 5000);
+ HttpConnectionParams.setSoTimeout(params, 5000);
+
+ HttpGet httpGet = new HttpGet(url);
+
+ logger.info("Executing request " + httpGet.getRequestLine());
+
+ // Create a custom response handler
+ ResponseHandler<String> responseHandler = new ResponseHandler<String>() {
+
+ @Override
+ public String handleResponse(
+ final HttpResponse response) throws ClientProtocolException, IOException {
+ int status = response.getStatusLine().getStatusCode();
+ if (status >= 200 && status < 300) {
+ HttpEntity entity = response.getEntity();
+ return entity != null ? EntityUtils.toString(entity) : null;
+ } else {
+ throw new ClientProtocolException("Unexpected response status: " + status);
+ }
+ }
+
+ };
+ String responseBody = null;
+ try {
+ responseBody = client.execute(httpGet, responseHandler);
+ } catch (ClientProtocolException e) {
+ throw new CDMServerException(e);
+ } catch (IOException e) {
+ throw new CDMServerException(e);
+ }
+ return responseBody;
+ }
+
+ public void addInstancesFromDataSourcesConfig() {
+
+ for(ICdmDataSource dataSource : CdmPersistentDataSource.getAllDataSources()){
+ logger.warn("Adding local instance " + dataSource.getName());
+ addInstance(dataSource.getName(), dataSource.getName());
+ }
+
+ }
+
+ public String toString(String instanceName, int port) {
+ return server + ":" + String.valueOf(port) + "/" + instanceName;
+ }
+
+ public CdmInstanceInfo getInstanceFromName(String instanceName) {
+ if(instanceName == null) {
+ return null;
+ }
+
+ for(CdmInstanceInfo instance : instances) {
+ if(instance.getName() != null && instance.getName().equals(instanceName)) {
+ return instance;
+ }
+ }
+ return null;
+ }
+
+ public CdmRemoteSource getCdmRemoteSource(CdmInstanceInfo instance, int port) {
+ if(instance != null) {
+ return CdmRemoteSource.NewInstance(name,
+ server,
+ port,
+ instance.getBasePath(),
+ null);
+ }
+ return null;
+ }
+
+ public boolean pingServer() {
+ try {
+ Socket s = new Socket(server, port);
+ logger.info("[CDM-Server] Available @ " + server + ":" + port );
+ updateInfo();
+ return true;
+ } catch (IOException ioe) {
+
+ } catch (CDMServerException e) {
+
+ }
+ return false;
+ }
+
+ public boolean pingInstance(CdmInstanceInfo instance, int port) throws CDMServerException {
+
+ ICdmRemoteSource crs = getCdmRemoteSource(instance, port);
+ try {
+ if(crs != null && crs.checkConnection()) {
+ logger.info("[CDM-Server] Running @ " + server + ":" + port + " for instance " + instance);
+ return true;
+ }
+ } catch (CdmSourceException e) {
+ throw new CDMServerException(e);
+ }
+
+ return false;
+ }
+
+ public int compareDbSchemaVersion(CdmInstanceInfo instance, int port) throws CDMServerException {
+
+ ICdmRemoteSource crs = getCdmRemoteSource(instance, port);
+ String dbSchemaVersion;
+ try {
+ dbSchemaVersion = crs.getDbSchemaVersion();
+ } catch (CdmSourceException e) {
+ throw new CDMServerException(e);
+ }
+
+
+ if(dbSchemaVersion != null) {
+ return CdmMetaData.compareVersion(dbSchemaVersion, CdmMetaData.getDbSchemaVersion(), 3, null);
+ } else {
+ throw new CDMServerException("Cannot determine editor db. schema version");
+ }
+ }
+
+ public int compareCdmlibServicesVersion() throws CdmSourceException {
+
+ String serverVersion = cdmlibServicesVersion;
+ String serverCdmlibLastModified = cdmlibServicesLastModified;
+
+ return compareCdmlibServicesVersion(serverVersion, serverCdmlibLastModified);
+ }
+
+
+ /**
+ * @param serverVersion
+ * @param editorVersion
+ * @throws CdmSourceException
+ */
+ public static int compareCdmlibServicesVersion(String serverVersion, String serverCdmlibLastModified) throws CdmSourceException {
+
+ String editorVersion = CdmApplicationState.getCdmlibVersion();
+ String editorCdmlibLastModified = CdmApplicationState.getCdmlibLastModified();
+
+ int result = 0;
+ if(StringUtils.isBlank(serverVersion) || StringUtils.isBlank(editorVersion)) {
+ throw new CdmSourceException("cdmlib-services server or editor version is empty");
+ }
+
+ String[] serverVersionSplit = serverVersion.split("\\.");
+ String[] editorVersionSplit = editorVersion.split("\\.");
+
+ if(serverVersionSplit.length < 3 || editorVersionSplit.length < 3 || serverVersionSplit.length > 4 || editorVersionSplit.length > 4) {
+ throw new CdmSourceException("cdmlib-services server or editor version is invalid");
+ }
+
+ Integer serverVersionPart;
+ Integer editorVersionPart;
+
+ for(int i=0 ; i<3 ; i++) {
+ serverVersionPart = Integer.valueOf(serverVersionSplit[i]);
+ editorVersionPart = Integer.valueOf(editorVersionSplit[i]);
+
+ int partCompare = serverVersionPart.compareTo(editorVersionPart);
+ if (partCompare != 0){
+ return partCompare;
+ }
+ }
+ // at this point major, minor and patch versions are matching
+
+ if(StringUtils.isBlank(serverCdmlibLastModified) || StringUtils.isBlank(editorCdmlibLastModified)) {
+ throw new CdmSourceException("cdmlib-services server or editor version is empty");
+ }
+
+ String cdmServerIgnoreVersion = System.getProperty("cdm.server.version.lm.ignore");
+ if(StringUtils.isBlank(cdmServerIgnoreVersion) || !cdmServerIgnoreVersion.equals("true")) {
+ Long serverLastModified = Long.valueOf(serverCdmlibLastModified);
+ Long editorLastModified = Long.valueOf(editorCdmlibLastModified);
+ return serverLastModified.compareTo(editorLastModified);
+ }
+
+ return 0;
+ }
+
+
+
+ public static List<CdmServerInfo> getCdmServers() {
+ if(cdmServerInfoList == null) {
+ cdmServerInfoList = new ArrayList<CdmServerInfo>();
+ //cdmServerInfoList.add(new CdmServerInfo(NAME_PRODUCTION, SERVER_PRODUCTION, 80));
+ //cdmServerInfoList.add(new CdmServerInfo(NAME_INTEGRATION, SERVER_INTEGRATION, 80));
+ cdmServerInfoList.add(new CdmServerInfo(NAME_DEMO_1, SERVER_DEMO_1, 80));
+ cdmServerInfoList.add(new CdmServerInfo(NAME_DEMO_2, SERVER_DEMO_2, 80));
+ cdmServerInfoList.add(new CdmServerInfo(NAME_TEST, SERVER_TEST, 80));
+ cdmServerInfoList.add(new CdmServerInfo(NAME_LOCALHOST, SERVER_LOCALHOST, 8080));
+ cdmServerInfoList.add(new CdmServerInfo(NAME_LOCALHOST_MGD, SERVER_LOCALHOST,8080));
+ }
+ return cdmServerInfoList;
+ }
+
+ public String getName() {
+ return name;
+ }
+
+ public String getServer() {
+ return server;
+ }
+
+
+ public int getPort() {
+ return port;
+ }
+
+
+ public List<CdmInstanceInfo> getInstances() throws CDMServerException {
+ if(instances.isEmpty()) {
+ refreshInstances();
+ }
+ return instances;
+ }
+
+ public static CdmRemoteSource getDevServerRemoteSource() {
+ String value = System.getProperty("cdm.server.dev.port");
+ boolean available = false;
+ CdmInstanceInfo devInstance = null;
+ if(value != null && !value.isEmpty()) {
+ int devPort = Integer.valueOf(value);
+ CdmServerInfo devCii = new CdmServerInfo(NAME_LOCALHOST_DEV, SERVER_LOCALHOST_DEV, devPort);
+ try {
+ devInstance = devCii.addInstance(NAME_INSTANCE_LOCALHOST_DEV, BASEPATH_LOCALHOST_DEV);
+ available = devCii.pingInstance(devInstance, devPort);
+ if(available) {
+ return devCii.getCdmRemoteSource(devInstance, devPort);
+ }
+ } catch (Exception e) {
+
+ }
+ }
+ return null;
+ }
+
+ public class CdmInstanceInfo {
+ private final String name;
+
+ /**
+ * The full path of the instance including the the prefix (if any).
+ * E.g. for an EDIT instance this would be something like "cdmserver/remoting"
+ * For a managed local server this would simply be "remoting"
+ */
+ private final String basePath;
+
+
+ public CdmInstanceInfo(String name, String basePath) {
+ this.name = name;
+ this.basePath = basePath;
+ }
+
+
+ public String getName() {
+ return name;
+ }
+
+ public String getBasePath() {
+ return basePath;
+ }
+ }
+}
* The contents of this file are subject to the Mozilla Public License Version 1.1
* See LICENSE.TXT at the top of this package for the full license terms.
*/
-package eu.etaxonomy.cdm.remote;
+package eu.etaxonomy.taxeditor.remoting.source;
import eu.etaxonomy.cdm.config.ICdmSource;
--- /dev/null
+// $Id$
+/**
+* Copyright (C) 2014 EDIT
+* European Distributed Institute of Taxonomy
+* http://www.e-taxonomy.eu
+*
+* The contents of this file are subject to the Mozilla Public License Version 1.1
+* See LICENSE.TXT at the top of this package for the full license terms.
+*/
+package eu.etaxonomy.taxeditor.service;
+
+import java.util.List;
+import java.util.UUID;
+
+import org.springframework.stereotype.Component;
+
+import eu.etaxonomy.cdm.api.application.CdmApplicationRemoteController;
+import eu.etaxonomy.cdm.api.application.CdmApplicationState;
+import eu.etaxonomy.cdm.model.common.CdmBase;
+import eu.etaxonomy.taxeditor.session.ICdmEntitySession;
+
+/**
+ * @author cmathew
+ * @date 14 Oct 2014
+ *
+ */
+@Component
+public class CachedCommonServiceImpl implements ICachedCommonService {
+
+
+ private static boolean cacheEnabled = true;
+
+ public static boolean isCacheEnabled() {
+ return cacheEnabled;
+ }
+
+ public static void setCacheEnabled(boolean cacheEnabled) {
+ CachedCommonServiceImpl.cacheEnabled = cacheEnabled;
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.remoting.service.ICachedCommonService#find(java.lang.Class, int)
+ */
+ @Override
+ public CdmBase find(Class<? extends CdmBase> clazz, int id) {
+ CdmBase cdmEntity = CdmApplicationState.getCurrentAppConfig().getCommonService().find(clazz, id, getPropertyPaths(clazz));
+ if(cdmEntity == null) {
+ throw new NullPointerException("CDM Entity of type " + clazz.getName() + " with id " + id + " is null.");
+ }
+ return cdmEntity;
+
+ }
+
+
+ private List<String> getPropertyPaths(Object obj) {
+ List<String> propertyPaths = null;
+ ICdmEntitySession cdmEntitySession =
+ ((CdmApplicationRemoteController)CdmApplicationState.getCurrentAppConfig()).getCdmEntitySessionManager().getActiveSession();
+ if(cdmEntitySession != null) {
+ propertyPaths = cdmEntitySession.getPropertyPaths(obj);
+ }
+ return propertyPaths;
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.service.ICachedCommonService#initializeCollection(java.util.UUID, java.lang.String)
+ */
+ @Override
+ public Object initializeCollection(UUID ownerUuid, String fieldName) {
+ return CdmApplicationState.getCurrentAppConfig().getCommonService().initializeCollection(ownerUuid, fieldName, getPropertyPaths(fieldName));
+ }
+
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.remoting.service.ICachedCommonService#isEmpty(org.hibernate.collection.spi.PersistentCollection)
+ */
+ @Override
+ public boolean isEmpty(UUID ownerUuid, String fieldName) {
+ return CdmApplicationState.getCurrentAppConfig().getCommonService().isEmpty(ownerUuid, fieldName);
+
+ }
+
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.remoting.service.ICachedCommonService#size(org.hibernate.collection.spi.PersistentCollection)
+ */
+ @Override
+ public int size(UUID ownerUuid, String fieldName) {
+ return CdmApplicationState.getCurrentAppConfig().getCommonService().size(ownerUuid, fieldName);
+ }
+
+
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.remoting.service.ICachedCommonService#contains(org.hibernate.collection.spi.PersistentCollection, java.lang.Object)
+ */
+ @Override
+ public boolean contains(UUID ownerUuid, String fieldName, Object element) {
+ return CdmApplicationState.getCurrentAppConfig().getCommonService().contains(ownerUuid, fieldName, element);
+ }
+
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.remoting.service.ICachedCommonService#containsKey(org.hibernate.collection.spi.PersistentCollection, java.lang.Object)
+ */
+ @Override
+ public boolean containsKey(UUID ownerUuid, String fieldName, Object key) {
+ return CdmApplicationState.getCurrentAppConfig().getCommonService().containsKey(ownerUuid, fieldName, key);
+ }
+
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.remoting.service.ICachedCommonService#containsValue(org.hibernate.collection.spi.PersistentCollection, java.lang.Object)
+ */
+ @Override
+ public boolean containsValue(UUID ownerUuid, String fieldName, Object element) {
+ return CdmApplicationState.getCurrentAppConfig().getCommonService().containsValue(ownerUuid, fieldName, element);
+ }
+
+
+
+
+
+
+}
--- /dev/null
+// $Id$
+/**
+ * Copyright (C) 2015 EDIT
+ * European Distributed Institute of Taxonomy
+ * http://www.e-taxonomy.eu
+ *
+ * The contents of this file are subject to the Mozilla Public License Version 1.1
+ * See LICENSE.TXT at the top of this package for the full license terms.
+ */
+package eu.etaxonomy.taxeditor.service;
+
+import java.io.IOException;
+
+import org.apache.commons.codec.binary.Base64;
+import org.apache.commons.httpclient.methods.PostMethod;
+import org.springframework.remoting.httpinvoker.CommonsHttpInvokerRequestExecutor;
+import org.springframework.remoting.httpinvoker.HttpInvokerClientConfiguration;
+import org.springframework.security.core.Authentication;
+import org.springframework.security.core.context.SecurityContext;
+
+import eu.etaxonomy.cdm.api.application.CdmApplicationState;
+
+/**
+ * @author cmathew
+ * @date 27 Jan 2015
+ *
+ */
+public class CdmAuthenticatedHttpInvokerRequestExecutor extends CommonsHttpInvokerRequestExecutor {
+
+ @Override
+ protected PostMethod createPostMethod(HttpInvokerClientConfiguration config) throws IOException {
+ PostMethod postMethod = super.createPostMethod(config);
+
+ SecurityContext securityContext = CdmApplicationState.getCurrentSecurityContext();
+ if(securityContext != null) {
+ Authentication auth = securityContext.getAuthentication();
+ if ((auth != null) && (auth.getName() != null) &&
+ (auth.getCredentials() != null)) {
+ String base64 = auth.getName() + ":" + auth.getCredentials().toString();
+ postMethod.setRequestHeader("Authorization", "Basic " +
+ new String(Base64.encodeBase64(base64.getBytes())));
+ }
+ }
+ return postMethod;
+ }
+}
\ No newline at end of file
--- /dev/null
+package eu.etaxonomy.taxeditor.service;
+
+public class CdmServiceInterceptorException extends RuntimeException {
+
+ public CdmServiceInterceptorException(String message) {
+ super(message);
+ }
+
+ public CdmServiceInterceptorException(Exception ex) {
+ super(ex);
+ }
+
+}
--- /dev/null
+package eu.etaxonomy.taxeditor.service;
+
+import java.io.IOException;
+import java.io.OutputStream;
+import java.util.HashSet;
+import java.util.Set;
+
+import org.apache.log4j.Logger;
+import org.springframework.remoting.httpinvoker.HttpInvokerClientConfiguration;
+import org.springframework.remoting.support.RemoteInvocation;
+import org.springframework.remoting.support.RemoteInvocationResult;
+import org.springframework.stereotype.Component;
+
+import eu.etaxonomy.cdm.api.application.CdmApplicationRemoteController;
+import eu.etaxonomy.cdm.api.application.CdmApplicationState;
+import eu.etaxonomy.cdm.api.service.UpdateResult;
+import eu.etaxonomy.taxeditor.session.ICdmEntitySessionManager;
+
+@Component
+public class CdmServiceRequestExecutor extends CdmAuthenticatedHttpInvokerRequestExecutor {
+
+ private static final Logger logger = Logger.getLogger(CdmServiceRequestExecutor.class);
+
+ private ICdmEntitySessionManager cdmEntitySessionManager ;
+
+ private RemoteInvocation currentRemoteInvocation;
+
+ protected final static Set<String> cachableMethods = new HashSet<String>();
+
+
+
+ public CdmServiceRequestExecutor() {
+ cachableMethods.add("merge");
+ cachableMethods.add("save");
+ cachableMethods.add("findWithUpdate");
+ cachableMethods.add("loadWithUpdate");
+ }
+
+ @Override
+ protected void writeRemoteInvocation(RemoteInvocation invocation, OutputStream os) throws IOException {
+ if(cdmEntitySessionManager == null) {
+ cdmEntitySessionManager =
+ ((CdmApplicationRemoteController)CdmApplicationState.getCurrentAppConfig()).getCdmEntitySessionManager();
+ }
+ currentRemoteInvocation = invocation;
+ super.writeRemoteInvocation(invocation, os);
+ }
+
+ @Override
+ protected RemoteInvocationResult doExecuteRequest(HttpInvokerClientConfiguration config,
+ java.io.ByteArrayOutputStream baos)
+ throws java.io.IOException,
+ java.lang.ClassNotFoundException {
+ RemoteInvocationResult rir = fromCache(currentRemoteInvocation);
+
+ if(rir == null) {
+ logger.info("Remote invoking : " + currentRemoteInvocation.getMethodName() + "@" + config.getServiceUrl());
+ rir = super.doExecuteRequest(config, baos);
+ if(rir.getValue() != null && !rir.hasException()) {
+ if(cachableMethods.contains(currentRemoteInvocation.getMethodName())) {
+ rir = new RemoteInvocationResult(cdmEntitySessionManager.load(rir.getValue(), true));
+ } else if(rir.getValue() instanceof UpdateResult){
+ UpdateResult result = (UpdateResult)rir.getValue();
+ if(result.isOk()){
+ cdmEntitySessionManager.load(result, true);
+ }
+ } else {
+ rir = new RemoteInvocationResult(cdmEntitySessionManager.load(rir.getValue(), false));
+ }
+ }
+ cache(currentRemoteInvocation, rir);
+ }
+ currentRemoteInvocation = null;
+
+ return rir;
+ }
+
+ public void cache(RemoteInvocation ri, RemoteInvocationResult rir) {
+
+ }
+
+ public RemoteInvocationResult fromCache(RemoteInvocation ri) {
+ return null;
+ }
+}
--- /dev/null
+// $Id$
+/**
+ * Copyright (C) 2014 EDIT
+ * European Distributed Institute of Taxonomy
+ * http://www.e-taxonomy.eu
+ *
+ * The contents of this file are subject to the Mozilla Public License Version 1.1
+ * See LICENSE.TXT at the top of this package for the full license terms.
+ */
+package eu.etaxonomy.taxeditor.service;
+
+import java.util.UUID;
+
+import eu.etaxonomy.cdm.model.common.CdmBase;
+
+/**
+ * @author cmathew
+ * @date 14 Oct 2014
+ *
+ */
+public interface ICachedCommonService {
+
+ public CdmBase find(Class<? extends CdmBase> clazz, int id);
+
+
+ /**
+ * Initializes a collection or map.
+ *
+ * @param ownerUuid uuid of owner cdm entity
+ * @param fieldName field name of collection or map
+ * @return initialised collection or map
+ */
+ public Object initializeCollection(UUID ownerUuid, String fieldName);
+
+ /**
+ * Checks if a collection or map is empty.
+ *
+ * @param ownerUuid uuid of owner cdm entity
+ * @param fieldName field name of collection or map
+ * @return true if the collection of map is empty, else false
+ */
+ public boolean isEmpty(UUID ownerUuid, String fieldName);
+
+ /**
+ * Returns the size of requested collection or map.
+ *
+ * @param ownerUuid uuid of owner cdm entity
+ * @param fieldName field name of collection or map
+ * @return the size of the persistent collection
+ */
+ public int size(UUID ownerUuid, String fieldName);
+
+ /**
+ * Checks whether an object is contained within a persistent collection.
+ *
+ * @param ownerUuid uuid of owner cdm entity
+ * @param fieldName field name of collection or map
+ * @param element the element to check for
+ * @return true if the element exists in the collection, false o/w
+ */
+ public boolean contains(UUID ownerUuid, String fieldName, Object element);
+
+ /**
+ * Checks whether an index object exists within a persistent collection
+ * (usually a map)
+ *
+ * @param ownerUuid uuid of owner cdm entity
+ * @param fieldName field name of map
+ * @param key the index object to look for.
+ * @return true if the index object exists in the collection, false o/w
+ */
+ public boolean containsKey(UUID ownerUuid, String fieldName, Object key);
+
+ /**
+ * checks whether an value object exists within a persistent collection
+ * (usually a map)
+ *
+ * @param ownerUuid uuid of owner cdm entity
+ * @param fieldName field name of map
+ * @param key the value object to look for.
+ * @return true if the value object exists in the collection, false o/w
+ */
+ public boolean containsValue(UUID ownerUuid, String fieldName, Object element);
+
+
+
+
+}
\ No newline at end of file
--- /dev/null
+package eu.etaxonomy.taxeditor.service;
+
+import java.util.HashMap;
+import java.util.HashSet;
+import java.util.List;
+import java.util.Map;
+import java.util.Set;
+
+import org.apache.log4j.Logger;
+import org.springframework.remoting.support.RemoteInvocation;
+import org.springframework.remoting.support.RemoteInvocationResult;
+
+import eu.etaxonomy.cdm.api.cache.CdmServiceCacher;
+import eu.etaxonomy.cdm.model.common.DefinedTermBase;
+import eu.etaxonomy.cdm.model.common.TermType;
+
+
+public class TermServiceRequestExecutor extends CdmServiceRequestExecutor {
+ private static final Logger logger = Logger.getLogger(TermServiceRequestExecutor.class);
+
+ private static Map<TermType, RemoteInvocationResult> termTypeMap = new
+ HashMap<TermType, RemoteInvocationResult>();
+
+ private static CdmServiceCacher cdmServiceCacher;
+
+ public static void setDefaultCacher(CdmServiceCacher css) {
+ cdmServiceCacher = css;
+ }
+
+ @Override
+ public void cache(RemoteInvocation ri, RemoteInvocationResult rir) {
+ if(cdmServiceCacher != null) {
+ if(ri.getMethodName().equals("listByTermType")) {
+ if(ri.getArguments()[1] == null) {
+ Set<DefinedTermBase> terms = new HashSet<DefinedTermBase>();
+ if(rir.getValue() != null) {
+ terms.addAll((List<DefinedTermBase>)rir.getValue());
+
+ for(DefinedTermBase<?> term : terms) {
+ cdmServiceCacher.load(term);
+ }
+ termTypeMap.put((TermType)ri.getArguments()[0], rir);
+ }
+
+ }
+ }
+ } else {
+ logger.info("Default CdmServiceCacher is null. Cannot cache terms");
+ }
+ }
+
+
+ @Override
+ public RemoteInvocationResult fromCache(RemoteInvocation ri) {
+ return termTypeMap.get(ri.getArguments()[0]);
+ }
+
+
+
+}
--- /dev/null
+package eu.etaxonomy.taxeditor.session;
+
+public class CdmClientSessionException extends RuntimeException {
+
+ public CdmClientSessionException(String message) {
+ super(message);
+ }
+}
--- /dev/null
+// $Id$
+/**
+ * Copyright (C) 2014 EDIT
+ * European Distributed Institute of Taxonomy
+ * http://www.e-taxonomy.eu
+ *
+ * The contents of this file are subject to the Mozilla Public License Version 1.1
+ * See LICENSE.TXT at the top of this package for the full license terms.
+ */
+package eu.etaxonomy.taxeditor.session;
+
+import java.util.ArrayList;
+import java.util.Arrays;
+import java.util.Collection;
+import java.util.List;
+import java.util.Map;
+import java.util.UUID;
+
+import net.sf.ehcache.statistics.LiveCacheStatistics;
+
+import org.apache.log4j.Logger;
+
+import eu.etaxonomy.cdm.api.service.IService;
+import eu.etaxonomy.cdm.api.service.UpdateResult;
+import eu.etaxonomy.cdm.model.common.CdmBase;
+import eu.etaxonomy.cdm.persistence.dto.MergeResult;
+import eu.etaxonomy.taxeditor.remoting.cache.CdmTransientEntityCacher;
+import eu.etaxonomy.taxeditor.remoting.cache.EntityCacherDebugResult;
+
+
+/**
+ *
+ * NOTE : It would be nice to have this class performing merge / delete operations
+ * using services, but this is only possible if we can 'intelligently'
+ * get from a model class to the correspoding service class
+ * @author cmathew
+ * @date 20 Oct 2014
+ *
+ */
+
+public class CdmEntitySession implements ICdmEntitySession {
+
+ private static final Logger logger = Logger.getLogger(CdmEntitySession.class);
+
+ private final CdmEntitySessionManager cdmEntitySessionManager;
+
+ private final ICdmEntitySessionEnabled sessionOwner;
+
+ private CdmTransientEntityCacher cdmTransientEntityCacher;
+
+ private List<ICdmEntitySessionEnabled> changeObservers;
+
+
+ public CdmEntitySession(ICdmEntitySessionEnabled sessionOwner, CdmEntitySessionManager cdmEntitySessionManager) {
+ this.sessionOwner = sessionOwner;
+ this.cdmEntitySessionManager = cdmEntitySessionManager;
+ init(sessionOwner, cdmEntitySessionManager);
+ }
+
+ private void init(ICdmEntitySessionEnabled sessionOwner, CdmEntitySessionManager cdmEntitySessionManager) {
+ this.cdmTransientEntityCacher = new CdmTransientEntityCacher(sessionOwner, cdmEntitySessionManager);
+ this.changeObservers = new ArrayList<ICdmEntitySessionEnabled>();
+ cdmEntitySessionManager.addToOwnerSessionMap(sessionOwner, this);
+ }
+
+
+
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySession#load(java.lang.Object, boolean)
+ */
+ @Override
+ public <O extends Object> O load(O obj, boolean update) {
+ return cdmTransientEntityCacher.load(obj, update);
+ }
+
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySession#load(eu.etaxonomy.cdm.model.common.CdmBase, boolean)
+ */
+ @Override
+ public <T extends CdmBase> T load(T cdmBase, boolean update) {
+ return (T)cdmTransientEntityCacher.load(cdmBase, update);
+ }
+
+
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySession#load(eu.etaxonomy.cdm.api.service.UpdateResult, boolean)
+ */
+ @Override
+ public UpdateResult load(UpdateResult updateResult, boolean update) {
+ return cdmTransientEntityCacher.load(updateResult, update);
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySession#load(eu.etaxonomy.cdm.persistence.dto.MergeResult, boolean)
+ */
+ @Override
+ public <T extends CdmBase> MergeResult<T> load(MergeResult<T> mergeResult, boolean update) {
+ return cdmTransientEntityCacher.load(mergeResult, update);
+ }
+
+ @Override
+ public <T extends CdmBase> void update() {
+ Collection<T> rootEntities = getRootEntities();
+ if(rootEntities != null) {
+ for(T rootEntity : rootEntities) {
+ load(rootEntity, true);
+ }
+ }
+ }
+
+// @Override
+// public <T extends ICdmBase> void update(T cdmBase, Set<CdmBase> affectedObjects) {
+// addEvent(cdmBase, affectedObjects, EventType.UPDATE);
+// }
+//
+// @Override
+// public <T extends ICdmBase> void update(T cdmBase, CdmBase affectedObject) {
+// Set<CdmBase> set = new HashSet<CdmBase>();
+// set.add(affectedObject);
+// addEvent(cdmBase, set, EventType.UPDATE);
+// }
+//
+//
+// @Override
+// public <T extends ICdmBase> void delete(T cdmBase, Set<CdmBase> affectedObjects) {
+// addEvent(cdmBase, affectedObjects, EventType.DELETE);
+// }
+//
+// @Override
+// public <T extends ICdmBase> void delete(Set<T> cdmBases, Set<CdmBase> affectedObjects) {
+// addEvent(cdmBases, affectedObjects, EventType.DELETE);
+// }
+
+
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySession#debug(eu.etaxonomy.cdm.model.common.CdmBase)
+ */
+ @Override
+ public <T extends CdmBase> EntityCacherDebugResult debug(T cdmBase) {
+ return debug(Arrays.asList(cdmBase));
+ }
+
+
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySession#debug(java.util.List)
+ */
+ @Override
+ public <T extends CdmBase> EntityCacherDebugResult debug(Collection<T> cdmBases) {
+ EntityCacherDebugResult entityCacherDebugResult =
+ new EntityCacherDebugResult(cdmTransientEntityCacher, cdmBases);
+ return entityCacherDebugResult;
+ }
+
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySession#debug()
+ */
+ @Override
+ public <T extends CdmBase> EntityCacherDebugResult debug() {
+ return debug(getRootEntities());
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySession#load(java.util.Collection)
+ */
+ @Override
+ public <T extends CdmBase> Collection<T> load(Collection<T> cdmBaseList, boolean update) {
+ return cdmTransientEntityCacher.load(cdmBaseList, update);
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySession#setEntitiesAsLatest()
+ */
+ @Override
+ public void setEntitiesAsLatest() {
+ //FIXME:Remoting need to think more about whether we really need this
+ // List<CdmBase> entities = cdmTransientEntityCacher.getAllEntities();
+ // for(CdmBase entity : entities) {
+ // cdmEntitySessionManager.setEntityAsLatest(entity);
+ // }
+ }
+
+
+ @Override
+ public void bind() {
+ logger.info("Binding session with owner " + sessionOwner.toString());
+ if(!cdmEntitySessionManager.contains(sessionOwner)) {
+ init(sessionOwner, cdmEntitySessionManager);
+ }
+ cdmEntitySessionManager.bind(sessionOwner);
+
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySession#dispose()
+ */
+ @Override
+ public void dispose() {
+
+ cdmTransientEntityCacher.dispose();
+ changeObservers.clear();
+ cdmEntitySessionManager.remove(sessionOwner);
+
+ }
+
+
+// /* (non-Javadoc)
+// * @see eu.etaxonomy.taxeditor.session.ICdmEntitySession#commit()
+// */
+// @Override
+// public void addEvent(ICdmBase cdmBase, Set<CdmBase> affectedObjects, EventType eventType) {
+// affectedObjects = (Set<CdmBase>) load(affectedObjects, true);
+// CdmDataChangeEvent cdce = CdmDataChangeEvent.NewInstance((CdmBase)cdmBase, affectedObjects, eventType);
+// CdmPostDataChangeObservableListener.getDefault().notifyObservers(cdce);
+// }
+
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySession#load(java.util.UUID, java.lang.Class)
+ */
+ @Override
+ public <T extends CdmBase> T remoteLoad(IService<T> service, UUID uuid) {
+ T cdmBase = service.load(uuid);
+ return load(cdmBase, false);
+ }
+
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySession#load(eu.etaxonomy.cdm.api.service.IService, java.util.UUID, java.util.List)
+ */
+ @Override
+ public <T extends CdmBase> T remoteLoad(IService<T> service, UUID uuid, List<String> propertyPaths) {
+ T cdmBase = service.load(uuid, propertyPaths);
+ return load(cdmBase, false);
+ }
+
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySession#save(eu.etaxonomy.cdm.api.service.IService, eu.etaxonomy.cdm.model.common.CdmBase)
+ */
+ @Override
+ public <T extends CdmBase> UUID remoteSave(IService<T> service, T cdmBase) {
+ UUID uuid = service.save(cdmBase).getUuid();
+ load(cdmBase,false);
+ return uuid;
+ }
+
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySession#update(eu.etaxonomy.cdm.api.service.IService, eu.etaxonomy.cdm.model.common.CdmBase)
+ */
+ @Override
+ public <T extends CdmBase> T remoteUpdate(IService<T> service, T cdmBase) {
+ T mergedCdmBase = service.merge(cdmBase, true).getMergedEntity();
+ return mergedCdmBase;
+ }
+
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySession#isActive()
+ */
+ @Override
+ public boolean isActive() {
+ return cdmEntitySessionManager.getActiveSession() == this;
+ }
+
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySession#getOwner()
+ */
+ @Override
+ public ICdmEntitySessionEnabled getOwner() {
+ return sessionOwner;
+ }
+
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySession#getNoOfObjectsInCache()
+ */
+ @Override
+ public LiveCacheStatistics getCacheStatistics() {
+ return cdmTransientEntityCacher.getCacheStatistics();
+ }
+
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySession#getRootEntities()
+ */
+ @Override
+ public <T extends CdmBase> Collection<T> getRootEntities() {
+ return sessionOwner.getRootEntities();
+ }
+
+ public CdmTransientEntityCacher getCacher() {
+ return cdmTransientEntityCacher;
+ }
+
+ @Override
+ public List<String> getPropertyPaths(Object obj) {
+ Map<Object, List<String>> propertyPathsMap = sessionOwner.getPropertyPathsMap();
+ if(propertyPathsMap == null || propertyPathsMap.isEmpty()) {
+ return null;
+ }
+ return propertyPathsMap.get(obj);
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySession#addNewCdmEntity(eu.etaxonomy.cdm.model.common.CdmBase)
+ */
+ @Override
+ public void addNewCdmEntity(CdmBase newEntity) {
+ cdmTransientEntityCacher.addNewEntity(newEntity);
+ }
+
+}
--- /dev/null
+// $Id$
+/**
+ * Copyright (C) 2014 EDIT
+ * European Distributed Institute of Taxonomy
+ * http://www.e-taxonomy.eu
+ *
+ * The contents of this file are subject to the Mozilla Public License Version 1.1
+ * See LICENSE.TXT at the top of this package for the full license terms.
+ */
+package eu.etaxonomy.taxeditor.session;
+
+import java.util.ArrayList;
+import java.util.Collection;
+import java.util.HashMap;
+import java.util.HashSet;
+import java.util.List;
+import java.util.Map;
+import java.util.Set;
+
+import org.apache.log4j.Logger;
+import org.springframework.stereotype.Component;
+
+import eu.etaxonomy.cdm.api.service.UpdateResult;
+import eu.etaxonomy.cdm.model.common.CdmBase;
+import eu.etaxonomy.cdm.persistence.dto.MergeResult;
+
+/**
+ * @author cmathew
+ * @date 16 Oct 2014
+ *
+ */
+@Component
+public class CdmEntitySessionManager implements ICdmEntitySessionManager {
+ private static final Logger logger = Logger.getLogger(CdmEntitySessionManager.class);
+
+ private final Map<ICdmEntitySessionEnabled, ICdmEntitySession> ownerSessionMap =
+ new HashMap<ICdmEntitySessionEnabled, ICdmEntitySession>();
+
+ private final List<ICdmEntitySessionManagerObserver> sessionObservers = new ArrayList<ICdmEntitySessionManagerObserver>();
+
+ private ICdmEntitySession activeSession;
+
+ private NullSession nullSession;
+
+ @Override
+ public ICdmEntitySession getNullSession() {
+ return nullSession;
+ }
+
+ @Override
+ public ICdmEntitySession newSession(ICdmEntitySessionEnabled sessionOwner, boolean setAsActive) {
+ ICdmEntitySession session = ownerSessionMap.get(sessionOwner);
+ if(session == null) {
+ session = new CdmEntitySession(sessionOwner, this);
+ addToOwnerSessionMap(sessionOwner, session);
+ }
+
+ if(setAsActive) {
+ setActiveSession(session);
+ }
+
+ return session;
+ }
+
+ @Override
+ public ICdmEntitySession bindNullSession() {
+
+ if(nullSession == null) {
+ nullSession = new NullSession(null, this);
+ }
+
+ setActiveSession(nullSession);
+
+ return nullSession;
+ }
+
+ @Override
+ public ICdmEntitySession getActiveSession() {
+ return activeSession;
+ }
+
+ private void setActiveSession(ICdmEntitySession activeSession) {
+ this.activeSession = activeSession;
+ notifyObservers();
+ }
+
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySessionManager#getSessions()
+ */
+ @Override
+ public Collection<ICdmEntitySession> getSessions() {
+ return ownerSessionMap.values();
+ }
+
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySessionManager#bind(eu.etaxonomy.taxeditor.session.ISessionEventListener)
+ */
+ @Override
+ public void bind(ICdmEntitySessionEnabled sessionOwner) {
+ if(sessionOwner == null) {
+ setActiveSession(null);
+ return;
+ }
+ ICdmEntitySession session = ownerSessionMap.get(sessionOwner);
+ if(session == null) {
+ throw new CdmClientSessionException("Trying to bind session which does not exist");
+ }
+
+ setActiveSession(session);
+
+ }
+
+ @Override
+ public boolean contains(ICdmEntitySessionEnabled sessionOwner) {
+ return ownerSessionMap.containsKey(sessionOwner);
+ }
+
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySessionManager#load(T)
+ */
+ @Override
+ public <T extends Object> T load(T obj, boolean update) {
+ if(activeSession == null) {
+ return obj;
+ } else {
+ return activeSession.load(obj, update);
+ }
+ }
+
+
+ @Override
+ public <T extends CdmBase> void update() {
+ if(activeSession != null) {
+ activeSession.update();
+ }
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySessionManager#load(T)
+ */
+ @Override
+ public <T extends CdmBase> T load(T cdmBase, boolean update) {
+ if(activeSession == null) {
+ return cdmBase;
+ }
+ return activeSession.load(cdmBase, update);
+ }
+
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySessionManager#load(eu.etaxonomy.cdm.api.service.UpdateResult, boolean)
+ */
+ @Override
+ public UpdateResult load(UpdateResult updateResult, boolean update) {
+ if(activeSession == null) {
+ return updateResult;
+ }
+ return activeSession.load(updateResult, update);
+ }
+
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySessionManager#load(eu.etaxonomy.cdm.persistence.dto.MergeResult, boolean)
+ */
+ @Override
+ public MergeResult load(MergeResult mergeResult, boolean update) {
+ if(activeSession == null) {
+ return mergeResult;
+ }
+ return activeSession.load(mergeResult, update);
+ }
+
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySessionManager#load(java.util.Collection)
+ */
+ @Override
+ public <T extends CdmBase> Collection<T> load(Collection<T> cdmBaseList, boolean update) {
+ if(activeSession == null) {
+ return cdmBaseList;
+ }
+ return activeSession.load(cdmBaseList, update);
+ }
+
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySessionManager#dispose(eu.etaxonomy.taxeditor.session.ISessionEventListener)
+ */
+ void remove(ICdmEntitySessionEnabled owner) {
+ ICdmEntitySession session = ownerSessionMap.get(owner);
+ if(session == null) {
+ logger.info("No Session connected to owner, nothing to do");
+ return;
+ }
+ if(session == activeSession) {
+ setActiveSession(null);
+ }
+ ownerSessionMap.remove(owner);
+ notifyObservers();
+
+ }
+
+ @Override
+ public void dispose(ICdmEntitySessionEnabled owner) {
+ ICdmEntitySession session = ownerSessionMap.get(owner);
+ if(session != null) {
+ session.dispose();
+ }
+ if(nullSession != null && nullSession.getOwner() == owner) {
+ nullSession = null;
+ }
+
+ }
+
+
+ @Override
+ public void disposeAll() {
+ Set<ICdmEntitySessionEnabled> owners =
+ new HashSet<ICdmEntitySessionEnabled>(ownerSessionMap.keySet());
+ for(ICdmEntitySessionEnabled owner : owners) {
+ ICdmEntitySession session = ownerSessionMap.get(owner);
+ if(session != null) {
+ session.dispose();
+ }
+ }
+
+ }
+
+ void addToOwnerSessionMap(ICdmEntitySessionEnabled owner, ICdmEntitySession session) {
+ ownerSessionMap.put(owner, session);
+ notifyObservers();
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySessionManager#addSessionListener()
+ */
+ @Override
+ public void addSessionObserver(ICdmEntitySessionManagerObserver sessionObserver) {
+ sessionObservers.add(sessionObserver);
+ }
+
+ public void notifyObservers() {
+ for(ICdmEntitySessionManagerObserver sessionObserver : sessionObservers) {
+ sessionObserver.changed();
+ }
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySessionManager#isRemoting()
+ */
+ @Override
+ public boolean isRemoting() {
+ // FIXME:Remoting stupid method to check whether we are in remoting
+ return true;
+ }
+
+}
+
--- /dev/null
+// $Id$
+/**
+* Copyright (C) 2015 EDIT
+* European Distributed Institute of Taxonomy
+* http://www.e-taxonomy.eu
+*
+* The contents of this file are subject to the Mozilla Public License Version 1.1
+* See LICENSE.TXT at the top of this package for the full license terms.
+*/
+package eu.etaxonomy.taxeditor.session;
+
+import org.apache.log4j.Logger;
+
+import eu.etaxonomy.cdm.api.application.CdmApplicationRemoteController;
+import eu.etaxonomy.cdm.api.application.CdmApplicationState;
+import eu.etaxonomy.cdm.model.NewEntityListener;
+import eu.etaxonomy.cdm.model.common.CdmBase;
+
+/**
+ * @author cmathew
+ * @date 30 Sep 2015
+ *
+ */
+public class DefaultNewEntityListener implements NewEntityListener {
+
+ private static final Logger logger = Logger.getLogger(DefaultNewEntityListener.class);
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.cdm.model.NewEntityListener#onCreate(eu.etaxonomy.cdm.model.common.CdmBase)
+ */
+ @Override
+ public void onCreate(CdmBase cdmBase) {
+ logger.info("New Entity created : " + cdmBase);
+ if(CdmApplicationState.getCurrentAppConfig() instanceof CdmApplicationRemoteController){
+ ((CdmApplicationRemoteController)CdmApplicationState.getCurrentAppConfig()).getCdmEntitySessionManager().getActiveSession().addNewCdmEntity(cdmBase);
+ }
+ }
+
+}
--- /dev/null
+package eu.etaxonomy.taxeditor.session;
+
+import java.util.Collection;
+import java.util.List;
+import java.util.UUID;
+
+import net.sf.ehcache.statistics.LiveCacheStatistics;
+import eu.etaxonomy.cdm.api.service.IService;
+import eu.etaxonomy.cdm.api.service.UpdateResult;
+import eu.etaxonomy.cdm.model.common.CdmBase;
+import eu.etaxonomy.cdm.persistence.dto.MergeResult;
+import eu.etaxonomy.taxeditor.remoting.cache.EntityCacherDebugResult;
+
+public interface ICdmEntitySession {
+
+ public ICdmEntitySessionEnabled getOwner();
+
+ public LiveCacheStatistics getCacheStatistics();
+
+ public <O extends Object> O load(O obj, boolean update);
+
+ public <T extends CdmBase> T load(T cdmBase, boolean update);
+
+ public UpdateResult load(UpdateResult updateResult, boolean update);
+
+ public <T extends CdmBase> MergeResult<T> load(MergeResult<T> mergeResult, boolean update);
+
+ public <T extends CdmBase> EntityCacherDebugResult debug(T cdmBase);
+
+ public <T extends CdmBase> EntityCacherDebugResult debug(Collection<T> cdmBase);
+
+ public <T extends CdmBase> EntityCacherDebugResult debug();
+
+ public <T extends CdmBase> Collection<T> load(Collection<T> cdmBaseList, boolean update);
+
+ public void setEntitiesAsLatest();
+
+ public <T extends CdmBase> Collection<T> getRootEntities();
+
+ public void dispose();
+
+ public void bind();
+
+// public void addEvent(ICdmBase cdmBase, Set<CdmBase> affectedObjects, EventType eventType);
+
+ public <T extends CdmBase> T remoteLoad(IService<T> service, UUID uuid);
+
+ public <T extends CdmBase> T remoteLoad(IService<T> service, UUID uuid, List<String> propertyPaths);
+
+ public <T extends CdmBase> UUID remoteSave(IService<T> service, T cdmBase);
+
+ public <T extends CdmBase> T remoteUpdate(IService<T> service, T cdmBase);
+
+
+// /**
+// * @param cdmBase
+// * @param affectedObjects
+// */
+// public <T extends ICdmBase> void update(T cdmBase, Set<CdmBase> affectedObjects);
+//
+// /**
+// * @param cdmBase
+// * @param affectedObjects
+// */
+// public <T extends ICdmBase> void delete(T cdmBase, Set<CdmBase> affectedObjects);
+//
+// /**
+// * @param cdmBase
+// * @param affectedObjects
+// */
+// public <T extends ICdmBase> void delete(Set<T> cdmBases, Set<CdmBase> affectedObjects);
+
+
+ public boolean isActive();
+
+// /**
+// * @param cdmBase
+// * @param affectedObject
+// */
+// public <T extends ICdmBase> void update(T cdmBase, CdmBase affectedObject);
+
+ /**
+ *
+ */
+ public <T extends CdmBase> void update();
+
+
+ /**
+ * @param obj
+ * @return
+ */
+ public List<String> getPropertyPaths(Object obj);
+
+ public void addNewCdmEntity(CdmBase newEntity);
+
+}
\ No newline at end of file
--- /dev/null
+package eu.etaxonomy.taxeditor.session;
+
+import java.util.Collection;
+import java.util.List;
+import java.util.Map;
+
+import eu.etaxonomy.cdm.model.common.CdmBase;
+
+public interface ICdmEntitySessionEnabled {
+
+ public ICdmEntitySession getCdmEntitySession();
+
+ public <T extends CdmBase> Collection<T> getRootEntities();
+
+ public Map<Object, List<String>> getPropertyPathsMap();
+
+}
--- /dev/null
+package eu.etaxonomy.taxeditor.session;
+
+import java.util.Collection;
+
+import eu.etaxonomy.cdm.api.service.UpdateResult;
+import eu.etaxonomy.cdm.model.common.CdmBase;
+import eu.etaxonomy.cdm.persistence.dto.MergeResult;
+
+public interface ICdmEntitySessionManager {
+
+ public abstract ICdmEntitySession newSession(ICdmEntitySessionEnabled sessionOwner, boolean setAsActive);
+
+ /**
+ * @param sessionOwner
+ * @return
+ */
+ public ICdmEntitySession bindNullSession();
+
+
+ public abstract void bind(ICdmEntitySessionEnabled sessionOwner);
+
+
+ public abstract <T extends Object> T load(T obj, boolean update);
+
+
+ public abstract <T extends CdmBase> T load(T cdmBase, boolean update);
+
+
+ public abstract UpdateResult load(UpdateResult updateResult, boolean update);
+
+ public abstract MergeResult load(MergeResult mergeResult, boolean update);
+
+
+ public abstract <T extends CdmBase> Collection<T> load(Collection<T> cdmBaseList, boolean update);
+
+
+ /**
+ * @return
+ */
+ public ICdmEntitySession getActiveSession();
+
+ public Collection<ICdmEntitySession> getSessions();
+
+ public void addSessionObserver(ICdmEntitySessionManagerObserver sessionObserver);
+
+
+
+
+ public boolean isRemoting();
+
+ /**
+ * @param owner
+ */
+ public void dispose(ICdmEntitySessionEnabled owner);
+
+ /**
+ *
+ */
+ public void disposeAll();
+
+
+ /**
+ *
+ */
+ public <T extends CdmBase> void update();
+
+ /**
+ * @param sessionOwner
+ * @return
+ */
+ public boolean contains(ICdmEntitySessionEnabled sessionOwner);
+
+ /**
+ * @return
+ */
+ public ICdmEntitySession getNullSession();
+
+
+}
\ No newline at end of file
--- /dev/null
+// $Id$
+/**
+* Copyright (C) 2015 EDIT
+* European Distributed Institute of Taxonomy
+* http://www.e-taxonomy.eu
+*
+* The contents of this file are subject to the Mozilla Public License Version 1.1
+* See LICENSE.TXT at the top of this package for the full license terms.
+*/
+package eu.etaxonomy.taxeditor.session;
+
+/**
+ * @author cmathew
+ * @date 16 Feb 2015
+ *
+ */
+public interface ICdmEntitySessionManagerObserver {
+
+ public void changed();
+
+}
--- /dev/null
+// $Id$
+/**
+* Copyright (C) 2015 EDIT
+* European Distributed Institute of Taxonomy
+* http://www.e-taxonomy.eu
+*
+* The contents of this file are subject to the Mozilla Public License Version 1.1
+* See LICENSE.TXT at the top of this package for the full license terms.
+*/
+package eu.etaxonomy.taxeditor.session;
+
+import java.util.Collection;
+import java.util.List;
+import java.util.Map;
+import java.util.UUID;
+
+import net.sf.ehcache.statistics.LiveCacheStatistics;
+import eu.etaxonomy.cdm.api.service.IService;
+import eu.etaxonomy.cdm.api.service.UpdateResult;
+import eu.etaxonomy.cdm.model.common.CdmBase;
+import eu.etaxonomy.cdm.persistence.dto.MergeResult;
+import eu.etaxonomy.taxeditor.remoting.cache.EntityCacherDebugResult;
+
+/**
+ * @author cmathew
+ * @date 30 Jul 2015
+ *
+ */
+public class NullSession implements ICdmEntitySession {
+
+ private ICdmEntitySessionEnabled sessionOwner;
+ private final CdmEntitySessionManager cdmEntitySessionManager;
+
+ public NullSession(ICdmEntitySessionEnabled sessionOwner, CdmEntitySessionManager cdmEntitySessionManager) {
+ this.sessionOwner = sessionOwner;
+ this.cdmEntitySessionManager = cdmEntitySessionManager;
+ }
+
+ public void setOwner(ICdmEntitySessionEnabled sessionOwner) {
+ this.sessionOwner = sessionOwner;
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySession#getOwner()
+ */
+ @Override
+ public ICdmEntitySessionEnabled getOwner() {
+ return sessionOwner;
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySession#getCacheStatistics()
+ */
+ @Override
+ public LiveCacheStatistics getCacheStatistics() {
+ // TODO Auto-generated method stub
+ return null;
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySession#load(java.lang.Object, boolean)
+ */
+ @Override
+ public <O> O load(O obj, boolean update) {
+ return obj;
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySession#load(eu.etaxonomy.cdm.model.common.CdmBase, boolean)
+ */
+ @Override
+ public <T extends CdmBase> T load(T cdmBase, boolean update) {
+ return cdmBase;
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySession#load(eu.etaxonomy.cdm.api.service.UpdateResult, boolean)
+ */
+ @Override
+ public UpdateResult load(UpdateResult updateResult, boolean update) {
+ return updateResult;
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySession#debug(eu.etaxonomy.cdm.model.common.CdmBase)
+ */
+ @Override
+ public <T extends CdmBase> EntityCacherDebugResult debug(T cdmBase) {
+ return null;
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySession#debug(java.util.Collection)
+ */
+ @Override
+ public <T extends CdmBase> EntityCacherDebugResult debug(Collection<T> cdmBase) {
+ return null;
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySession#debug()
+ */
+ @Override
+ public <T extends CdmBase> EntityCacherDebugResult debug() {
+ return null;
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySession#load(java.util.Collection, boolean)
+ */
+ @Override
+ public <T extends CdmBase> Collection<T> load(Collection<T> cdmBaseList, boolean update) {
+ return cdmBaseList;
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySession#setEntitiesAsLatest()
+ */
+ @Override
+ public void setEntitiesAsLatest() {
+
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySession#getRootEntities()
+ */
+ @Override
+ public <T extends CdmBase> Collection<T> getRootEntities() {
+ return null;
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySession#dispose()
+ */
+ @Override
+ public void dispose() {
+ cdmEntitySessionManager.remove(sessionOwner);
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySession#bind()
+ */
+ @Override
+ public void bind() {
+ cdmEntitySessionManager.bindNullSession();
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySession#remoteLoad(eu.etaxonomy.cdm.api.service.IService, java.util.UUID)
+ */
+ @Override
+ public <T extends CdmBase> T remoteLoad(IService<T> service, UUID uuid) {
+ T cdmBase = service.load(uuid);
+ return load(cdmBase, false);
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySession#remoteLoad(eu.etaxonomy.cdm.api.service.IService, java.util.UUID, java.util.List)
+ */
+ @Override
+ public <T extends CdmBase> T remoteLoad(IService<T> service, UUID uuid, List<String> propertyPaths) {
+ T cdmBase = service.load(uuid, propertyPaths);
+ return load(cdmBase, false);
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySession#remoteSave(eu.etaxonomy.cdm.api.service.IService, eu.etaxonomy.cdm.model.common.CdmBase)
+ */
+ @Override
+ public <T extends CdmBase> UUID remoteSave(IService<T> service, T cdmBase) {
+ UUID uuid = service.save(cdmBase).getUuid();
+ load(cdmBase,false);
+ return uuid;
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySession#remoteUpdate(eu.etaxonomy.cdm.api.service.IService, eu.etaxonomy.cdm.model.common.CdmBase)
+ */
+ @Override
+ public <T extends CdmBase> T remoteUpdate(IService<T> service, T cdmBase) {
+ T mergedCdmBase = service.merge(cdmBase, true).getMergedEntity();
+ return mergedCdmBase;
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySession#isActive()
+ */
+ @Override
+ public boolean isActive() {
+ return cdmEntitySessionManager.getActiveSession() == this;
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySession#update()
+ */
+ @Override
+ public <T extends CdmBase> void update() {
+
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySession#getPropertyPaths(java.lang.Object)
+ */
+ @Override
+ public List<String> getPropertyPaths(Object obj) {
+ Map<Object, List<String>> propertyPathsMap = sessionOwner.getPropertyPathsMap();
+ if(propertyPathsMap == null || propertyPathsMap.isEmpty()) {
+ return null;
+ }
+ return propertyPathsMap.get(obj);
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySession#addNewCdmEntity(eu.etaxonomy.cdm.model.common.CdmBase)
+ */
+ @Override
+ public void addNewCdmEntity(CdmBase newEntity) {
+ // TODO Auto-generated method stub
+
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySession#load(eu.etaxonomy.cdm.persistence.dto.MergeResult, boolean)
+ */
+ @Override
+ public <T extends CdmBase> MergeResult<T> load(MergeResult<T> mergeResult, boolean update) {
+ return mergeResult;
+ }
+
+}
--- /dev/null
+// $Id$
+/**
+* Copyright (C) 2015 EDIT
+* European Distributed Institute of Taxonomy
+* http://www.e-taxonomy.eu
+*
+* The contents of this file are subject to the Mozilla Public License Version 1.1
+* See LICENSE.TXT at the top of this package for the full license terms.
+*/
+package eu.etaxonomy.taxeditor.session.mock;
+
+import java.util.Collection;
+import java.util.List;
+import java.util.UUID;
+
+import net.sf.ehcache.statistics.LiveCacheStatistics;
+import eu.etaxonomy.cdm.api.service.IService;
+import eu.etaxonomy.cdm.api.service.UpdateResult;
+import eu.etaxonomy.cdm.model.common.CdmBase;
+import eu.etaxonomy.cdm.persistence.dto.MergeResult;
+import eu.etaxonomy.taxeditor.remoting.cache.EntityCacherDebugResult;
+import eu.etaxonomy.taxeditor.session.ICdmEntitySession;
+import eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled;
+
+/**
+ * @author cmathew
+ * @date 29 Jan 2015
+ *
+ */
+public class MockCdmEntitySession implements ICdmEntitySession {
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySession#load(java.lang.Object)
+ */
+ @Override
+ public <O extends Object> O load(O obj, boolean update) {
+ return obj;
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySession#load(eu.etaxonomy.cdm.model.common.CdmBase)
+ */
+ @Override
+ public <T extends CdmBase> T load(T cdmBase, boolean update) {
+ return cdmBase;
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySession#load(java.util.Collection)
+ */
+ @Override
+ public <T extends CdmBase> Collection<T> load(Collection<T> cdmBaseList, boolean update) {
+ return cdmBaseList;
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySession#setEntitiesAsLatest()
+ */
+ @Override
+ public void setEntitiesAsLatest() {
+
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySession#dispose()
+ */
+ @Override
+ public void dispose() {
+
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySession#bind()
+ */
+ @Override
+ public void bind() {
+ // TODO Auto-generated method stub
+
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySession#debug(eu.etaxonomy.cdm.model.common.CdmBase)
+ */
+ @Override
+ public <T extends CdmBase> EntityCacherDebugResult debug(T cdmBase) {
+
+ return new EntityCacherDebugResult();
+ }
+
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySession#load(java.util.UUID, eu.etaxonomy.cdm.api.service.IService)
+ */
+ @Override
+ public <T extends CdmBase> T remoteLoad(IService<T> service, UUID uuid) {
+ return service.load(uuid);
+ }
+
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySession#load(eu.etaxonomy.cdm.api.service.IService, java.util.UUID, java.util.List)
+ */
+ @Override
+ public <T extends CdmBase> T remoteLoad(IService<T> service, UUID uuid, List<String> propertyPaths) {
+ return service.load(uuid, propertyPaths);
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySession#save(eu.etaxonomy.cdm.api.service.IService, eu.etaxonomy.cdm.model.common.CdmBase)
+ */
+ @Override
+ public <T extends CdmBase> UUID remoteSave(IService<T> service, T cdmBase) {
+ return service.save(cdmBase).getUuid();
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySession#update(eu.etaxonomy.cdm.api.service.IService, eu.etaxonomy.cdm.model.common.CdmBase)
+ */
+ @Override
+ public <T extends CdmBase> T remoteUpdate(IService<T> service, T cdmBase) {
+ return cdmBase;
+ }
+
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySession#getOwner()
+ */
+ @Override
+ public ICdmEntitySessionEnabled getOwner() {
+ return null;
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySession#getCacheStatistics()
+ */
+ @Override
+ public LiveCacheStatistics getCacheStatistics() {
+ return null;
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySession#isActive()
+ */
+ @Override
+ public boolean isActive() {
+ return false;
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySession#getRootEntities()
+ */
+ @Override
+ public <T extends CdmBase> List<T> getRootEntities() {
+ return null;
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySession#debug(java.util.List)
+ */
+ @Override
+ public <T extends CdmBase> EntityCacherDebugResult debug(Collection<T> cdmBase) {
+
+ return null;
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySession#debug()
+ */
+ @Override
+ public <T extends CdmBase> EntityCacherDebugResult debug() {
+
+ return null;
+ }
+
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySession#update()
+ */
+ @Override
+ public <T extends CdmBase> void update() {
+ // TODO Auto-generated method stub
+
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySession#load(eu.etaxonomy.cdm.api.service.UpdateResult, boolean)
+ */
+ @Override
+ public UpdateResult load(UpdateResult updateResult, boolean update) {
+ return updateResult;
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySession#getPropertyPath(java.lang.Class)
+ */
+ @Override
+ public List<String> getPropertyPaths(Object obj) {
+ // TODO Auto-generated method stub
+ return null;
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySession#addNewCdmEntity(eu.etaxonomy.cdm.model.common.CdmBase)
+ */
+ @Override
+ public void addNewCdmEntity(CdmBase newEntity) {
+ // TODO Auto-generated method stub
+
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySession#load(eu.etaxonomy.cdm.persistence.dto.MergeResult, boolean)
+ */
+ @Override
+ public <T extends CdmBase> MergeResult<T> load(MergeResult<T> mergeResult, boolean update) {
+ return mergeResult;
+ }
+
+
+}
--- /dev/null
+package eu.etaxonomy.taxeditor.session.mock;
+
+import java.util.Collection;
+
+import eu.etaxonomy.cdm.api.service.UpdateResult;
+import eu.etaxonomy.cdm.model.common.CdmBase;
+import eu.etaxonomy.cdm.persistence.dto.MergeResult;
+import eu.etaxonomy.taxeditor.session.ICdmEntitySession;
+import eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled;
+import eu.etaxonomy.taxeditor.session.ICdmEntitySessionManager;
+import eu.etaxonomy.taxeditor.session.ICdmEntitySessionManagerObserver;
+
+
+public class MockCdmEntitySessionManager implements ICdmEntitySessionManager {
+
+
+ @Override
+ public void bind(ICdmEntitySessionEnabled sessionOwner) {
+ }
+
+ @Override
+ public <T> T load(T obj, boolean update) {
+ return obj;
+ }
+
+ @Override
+ public <T extends CdmBase> T load(T obj, boolean update) {
+ return obj;
+ }
+
+
+ @Override
+ public <T extends CdmBase> Collection<T> load(Collection<T> cdmBaseList, boolean update) {
+ return cdmBaseList;
+ }
+
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySessionManager#newSession(eu.etaxonomy.taxeditor.session.ISessionEventListener, boolean)
+ */
+ @Override
+ public ICdmEntitySession newSession(ICdmEntitySessionEnabled sessionOwner, boolean setAsActive) {
+ return new MockCdmEntitySession();
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySessionManager#getActiveSession()
+ */
+ @Override
+ public ICdmEntitySession getActiveSession() {
+ return new MockCdmEntitySession();
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySessionManager#getSessions()
+ */
+ @Override
+ public Collection<ICdmEntitySession> getSessions() {
+ return null;
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySessionManager#addSessionObserver(eu.etaxonomy.taxeditor.session.ICdmEntitySessionManagerObserver)
+ */
+ @Override
+ public void addSessionObserver(ICdmEntitySessionManagerObserver sessionObserver) {
+
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySessionManager#isRemoting()
+ */
+ @Override
+ public boolean isRemoting() {
+ return false;
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySessionManager#dispose(eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled)
+ */
+ @Override
+ public void dispose(ICdmEntitySessionEnabled owner) {
+
+
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySessionManager#disposeAll()
+ */
+ @Override
+ public void disposeAll() {
+
+
+ }
+
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySessionManager#update()
+ */
+ @Override
+ public <T extends CdmBase> void update() {
+ // TODO Auto-generated method stub
+
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySessionManager#load(eu.etaxonomy.cdm.api.service.UpdateResult, boolean)
+ */
+ @Override
+ public UpdateResult load(UpdateResult updateResult, boolean update) {
+ return updateResult;
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySessionManager#contains(eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled)
+ */
+ @Override
+ public boolean contains(ICdmEntitySessionEnabled sessionOwner) {
+ return false;
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySessionManager#bindNullSession(eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled)
+ */
+ @Override
+ public ICdmEntitySession bindNullSession() {
+ return new MockCdmEntitySession();
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySessionManager#getNullSession()
+ */
+ @Override
+ public ICdmEntitySession getNullSession() {
+ return new MockCdmEntitySession();
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySessionManager#load(eu.etaxonomy.cdm.persistence.dto.MergeResult, boolean)
+ */
+ @Override
+ public MergeResult load(MergeResult mergeResult, boolean update) {
+ return mergeResult;
+ }
+
+}
package org.hibernate.collection.internal;
import java.io.Serializable;
+import java.lang.reflect.Field;
import java.util.ArrayList;
import java.util.Collection;
import java.util.Collections;
-import java.util.HashMap;
import java.util.HashSet;
import java.util.Iterator;
import java.util.List;
import java.util.ListIterator;
-import java.util.Map;
-import java.util.Set;
-import java.util.TreeMap;
-import java.util.TreeSet;
import javax.naming.NamingException;
import org.hibernate.type.Type;
import org.jboss.logging.Logger;
-import eu.etaxonomy.cdm.api.application.CdmApplicationRemoteController;
-import eu.etaxonomy.cdm.api.application.ICdmApplicationConfiguration;
-import eu.etaxonomy.cdm.api.service.ICommonService;
-import eu.etaxonomy.cdm.model.common.PersistentMultiLanguageText;
+import eu.etaxonomy.cdm.api.application.CdmApplicationRemoteConfiguration;
+import eu.etaxonomy.cdm.model.common.CdmBase;
+import eu.etaxonomy.taxeditor.remoting.CdmEagerLoadingException;
+import eu.etaxonomy.taxeditor.remoting.cache.ProxyUtils;
+import eu.etaxonomy.taxeditor.service.ICachedCommonService;
/**
* Base class implementing {@link org.hibernate.collection.spi.PersistentCollection}
* @throws LazyInitializationException if we cannot initialize
*/
protected final void initialize(final boolean writing) {
- // In remoting we are sure that session is null
- // both when using property paths and switching off conversations
- if(session == null && remoting) {
- remoteInitialize();
- }
-
- if ( initialized ) {
- return;
- }
-
-
- withTemporarySessionIfNeeded(
- new LazyInitializationWork<Object>() {
- @Override
- public Object doWork() {
- session.initializeCollection( AbstractPersistentCollection.this, writing );
- return null;
- }
- }
- );
+ if ( initialized ) {
+ return;
+ }
+
+ // In remoting we are sure that session is null
+ // both when using property paths and switching off conversations
+ if(session == null && remoting) {
+ remoteInitialize();
+ } else {
+ withTemporarySessionIfNeeded(
+ new LazyInitializationWork<Object>() {
+ @Override
+ public Object doWork() {
+ session.initializeCollection( AbstractPersistentCollection.this, writing );
+ return null;
+ }
+ }
+ );
+ }
}
private void throwLazyInitializationExceptionIfNotConnected() {
// readElementExistence(final Object element)
// readElementByIndex(final Object index)
- private static ICdmApplicationConfiguration configuration;
+ private static CdmApplicationRemoteConfiguration configuration;
private static boolean remoting = false;
- public static void setConfiguration(ICdmApplicationConfiguration conf) {
+ public static void setConfiguration(CdmApplicationRemoteConfiguration conf) {
+ remoting = true;
configuration = conf;
-
- if(conf instanceof CdmApplicationRemoteController) {
- remoting = true;
- } else {
- remoting = false;
- }
}
try {
String role = getRole();
String fieldName = role.substring(role.lastIndexOf(".") + 1);
- log.info("--> Remote Lazy Initializing " + getRole() + " , key : " + getKey() + " , field : " + fieldName);
+ log.info("--> Remote Lazy Initializing Collection " + getRole() + " , owner : " + getOwner().getClass() + "/" + getKey() + " , field : " + fieldName);
Object owner = getOwner();
-
+ CdmBase cdmBase;
+ if(owner instanceof CdmBase) {
+ cdmBase = (CdmBase)owner;
+ } else {
+ throw new HibernateException("Owner of persistent collection is not a cdm entity");
+ }
if(configuration == null) {
throw new HibernateException("CdmApplicationRemoteConfiguration not initialized (null)");
}
- ICommonService commonService = configuration.getCommonService();
- if(commonService == null) {
+ ICachedCommonService cachedCommonService = configuration.getCachedCommonService();
+ if(cachedCommonService == null) {
throw new HibernateException("commonService not initialized (null)");
}
-// PersistentCollection col = commonService.initializeCollection(this);
-// afterInitialize();
-//
-// Class<?> clazz = getClass();
-// if (clazz != null) {
-// CollectionField cf = getCollectionField(col);
-// Field field = clazz.getDeclaredField(cf.getFieldName());
-// field.setAccessible(true);
-// field.set(this, cf.getCollection());
-// }
- } catch (Exception ex) {
- log.warn(ex.getMessage());
- }
- log.warn("This code is invalid");
- }
- }
-
-
- private CollectionField getCollectionField(PersistentCollection pc) {
- if(pc != null) {
- if(pc instanceof PersistentSet) {
- return new CollectionField(new HashSet((Set)pc), "set");
- }
- if(pc instanceof PersistentSortedSet) {
- return new CollectionField(new TreeSet((Set)pc), "set");
- }
- if(pc instanceof PersistentList) {
- return new CollectionField(new ArrayList((List)pc), "list");
- }
- if(pc instanceof PersistentMap || pc instanceof PersistentMultiLanguageText) {
- return new CollectionField(new HashMap((Map)pc), "map");
- }
- if(pc instanceof PersistentSortedMap) {
- return new CollectionField(new TreeMap((Map)pc), "map");
- }
- }
- return null;
- }
+ //Object obj = ProxyUtils.deproxy(cachedCommonService.initializeCollection(this));
+ Object obj = ProxyUtils.deproxy(cachedCommonService.initializeCollection(cdmBase.getUuid(), fieldName));
+ if(ProxyUtils.isProxy(obj)) {
+ throw new HibernateException("Persistent Collection initialized but is still a proxy");
+ }
+ afterInitialize();
+
+ Class<?> clazz = getClass();
+ if (clazz != null) {
+ //CollectionField cf = cachedCommonService.getCollectionField(col);
+ //cachedCommonService.updatePersistentCollection(cf);
+ Object collectionType = ProxyUtils.getCollectionType(obj);
+ Field field = clazz.getDeclaredField(collectionType.toString());
+ field.setAccessible(true);
+ field.set(this, obj);
+ ProxyUtils.setRoleValueInOwner(owner, role, obj);
- private String getCollectionFieldName(PersistentCollection pc) {
- if(pc != null) {
- if(pc instanceof PersistentSet || pc instanceof PersistentSortedSet) {
- return "set";
- }
- if(pc instanceof PersistentList) {
- return "list";
- }
- if(pc instanceof PersistentMap || pc instanceof PersistentMultiLanguageText) {
- return "map";
+ }
+ } catch (Exception ex) {
+ throw new CdmEagerLoadingException(ex);
}
}
- return null;
- }
-
- private class CollectionField {
- private final Object col;
- private final String fieldName;
- public CollectionField(Object col, String fieldName) {
- this.col = col;
- this.fieldName = fieldName;
- }
-
- public Object getCollection() {
- return this.col;
- }
-
- public String getFieldName() {
- return this.fieldName;
- }
- }
-
- public static boolean isInitialized(List list) {
- return ((AbstractPersistentCollection)list).initialized;
}
- public static boolean isInitialized(Map map) {
- return ((AbstractPersistentCollection)map).initialized;
- }
-
- public static boolean isInitialized(Set set) {
- return ((AbstractPersistentCollection)set).initialized;
- }
}
package org.hibernate.proxy;
import java.io.Serializable;
-import java.util.Set;
import javax.naming.NamingException;
import org.hibernate.Session;
import org.hibernate.SessionException;
import org.hibernate.TransientObjectException;
-import org.hibernate.collection.internal.AbstractPersistentCollection;
import org.hibernate.engine.spi.EntityKey;
import org.hibernate.engine.spi.SessionFactoryImplementor;
import org.hibernate.engine.spi.SessionImplementor;
import org.hibernate.internal.SessionFactoryRegistry;
import org.hibernate.persister.entity.EntityPersister;
import org.jboss.logging.Logger;
-import org.springframework.beans.factory.annotation.Autowire;
-import org.springframework.beans.factory.annotation.Configurable;
-import org.springframework.stereotype.Component;
-import eu.etaxonomy.cdm.api.application.CdmApplicationRemoteController;
-import eu.etaxonomy.cdm.api.application.ICdmApplicationConfiguration;
-import eu.etaxonomy.cdm.api.service.ICommonService;
+import eu.etaxonomy.cdm.api.application.CdmApplicationRemoteConfiguration;
import eu.etaxonomy.cdm.model.common.CdmBase;
+import eu.etaxonomy.taxeditor.remoting.cache.ProxyUtils;
+import eu.etaxonomy.taxeditor.service.ICachedCommonService;
/**
* Convenience base class for lazy initialization handlers. Centralizes the basic plumbing of doing lazy
*
* @author Gavin King
*/
-@Component
-@Configurable(dependencyCheck = true,autowire = Autowire.BY_TYPE)
public abstract class AbstractLazyInitializer implements LazyInitializer {
private static final Logger log = Logger.getLogger( AbstractLazyInitializer.class );
SessionFactoryImplementor sf = (SessionFactoryImplementor)
SessionFactoryRegistry.INSTANCE.getSessionFactory( sessionFactoryUuid );
SessionImplementor session = (SessionImplementor) sf.openSession();
-
+
// TODO: On the next major release, add an
// 'isJTA' or 'getTransactionFactory' method to Session.
boolean isJTA = session.getTransactionCoordinator()
.getTransactionContext().getTransactionEnvironment()
.getTransactionFactory()
.compatibleWithJtaSynchronization();
-
+
if ( !isJTA ) {
// Explicitly handle the transactions only if we're not in
// a JTA environment. A lazy loading temporary session can
public void setUnwrap(boolean unwrap) {
this.unwrap = unwrap;
}
-
+
/** Below is section of code which makes remote service calls */
-
- private static ICdmApplicationConfiguration configuration;
+
+ private static CdmApplicationRemoteConfiguration configuration;
private static boolean remoting = false;
-
- public static void setConfiguration(ICdmApplicationConfiguration conf) {
- configuration = conf;
-
- if(conf instanceof CdmApplicationRemoteController) {
- remoting = true;
- } else {
- remoting = false;
- }
+
+ public static void setConfiguration(CdmApplicationRemoteConfiguration conf) {
+ remoting = true;
+ configuration = conf;
}
-
-
- private void remoteInitialize() {
-
- if(!initialized) {
+
+
+ private void remoteInitialize() {
+
+ if(!initialized) {
int classid = ((Integer)getIdentifier()).intValue();
- log.debug("--> Remote Lazy Initializing" + getEntityName() + " with id " + classid);
+ log.info("--> Remote Lazy Initializing Object " + getEntityName() + " with id " + classid);
Class clazz;
try {
- clazz = (Class<? extends CdmBase>) Class.forName(getEntityName());
+ clazz = Class.forName(getEntityName());
} catch (ClassNotFoundException e) {
throw new HibernateException("Class for " + getEntityName() + " not found", e);
}
if(configuration == null) {
throw new HibernateException("CdmApplicationRemoteConfiguration not initialized (null)");
}
- ICommonService commonService = configuration.getCommonService();
- if(commonService == null) {
+ ICachedCommonService cachedCommonService = configuration.getCachedCommonService();
+ if(cachedCommonService == null) {
throw new HibernateException("commonService not initialized (null)");
}
-
- CdmBase cdmBase = CdmBase.deproxy(commonService.find(clazz,classid),clazz);
+
+ CdmBase cdmBase = cachedCommonService.find(clazz,classid);
+ if(ProxyUtils.isProxy(cdmBase)) {
+ throw new HibernateException("CdmBase Object initialized but is still a proxy");
+ }
setImplementation(cdmBase);
-
+
}
}
-
+
public static boolean isInitialized(AbstractLazyInitializer obj) {
return obj.initialized;
}
--- /dev/null
+cdmlib-remote-webapp.war
<?xml version="1.0" encoding="UTF-8"?>\r
<beans xmlns="http://www.springframework.org/schema/beans"\r
- xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"\r
- xmlns:context="http://www.springframework.org/schema/context"\r
- xmlns:tx="http://www.springframework.org/schema/tx"\r
- xsi:schemaLocation="http://www.springframework.org/schema/beans http://www.springframework.org/schema/beans/spring-beans-2.5.xsd\r
- http://www.springframework.org/schema/tx http://www.springframework.org/schema/tx/spring-tx-2.5.xsd\r
- http://www.springframework.org/schema/context http://www.springframework.org/schema/context/spring-context-2.5.xsd">\r
-\r
- \r
- <bean id="agentService"\r
- class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
- <property name="serviceUrl">\r
- <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/agent.service</value>\r
- </property>\r
- <property name="serviceInterface">\r
- <value>eu.etaxonomy.cdm.api.service.IAgentService</value>\r
- </property>\r
- <property name="httpInvokerRequestExecutor">\r
- <bean class="org.springframework.security.remoting.httpinvoker.AuthenticationSimpleHttpInvokerRequestExecutor" />\r
- </property>\r
- </bean>\r
-\r
- <bean id="annotationService"\r
- class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
- <property name="serviceUrl">\r
- <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/annotation.service</value>\r
- </property>\r
- <property name="serviceInterface">\r
- <value>eu.etaxonomy.cdm.api.service.IAnnotationService</value>\r
- </property>\r
- <property name="httpInvokerRequestExecutor">\r
- <bean class="org.springframework.security.remoting.httpinvoker.AuthenticationSimpleHttpInvokerRequestExecutor" />\r
- </property>\r
- </bean>\r
-\r
- <bean id="auditeventService"\r
- class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
- <property name="serviceUrl">\r
- <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/auditevent.service</value>\r
- </property>\r
- <property name="serviceInterface">\r
- <value>eu.etaxonomy.cdm.api.service.IAuditEventService</value>\r
- </property>\r
- <property name="httpInvokerRequestExecutor">\r
- <bean class="org.springframework.security.remoting.httpinvoker.AuthenticationSimpleHttpInvokerRequestExecutor" />\r
- </property>\r
- </bean>\r
-\r
- <bean id="classificationService"\r
- class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
- <property name="serviceUrl">\r
- <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/classification.service</value>\r
- </property>\r
- <property name="serviceInterface">\r
- <value>eu.etaxonomy.cdm.api.service.IClassificationService</value>\r
- </property>\r
- <property name="httpInvokerRequestExecutor">\r
- <bean class="org.springframework.security.remoting.httpinvoker.AuthenticationSimpleHttpInvokerRequestExecutor" />\r
- </property>\r
- </bean>\r
-\r
- <bean id="collectionService"\r
- class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
- <property name="serviceUrl">\r
- <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/collection.service</value>\r
- </property>\r
- <property name="serviceInterface">\r
- <value>eu.etaxonomy.cdm.api.service.ICollectionService</value>\r
- </property>\r
- <property name="httpInvokerRequestExecutor">\r
- <bean class="org.springframework.security.remoting.httpinvoker.AuthenticationSimpleHttpInvokerRequestExecutor" />\r
- </property>\r
- </bean>\r
-\r
- <bean id="commonService"\r
- class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
- <property name="serviceUrl">\r
- <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/common.service</value>\r
- </property>\r
- <property name="serviceInterface">\r
- <value>eu.etaxonomy.cdm.api.service.ICommonService</value>\r
- </property>\r
- <property name="httpInvokerRequestExecutor">\r
- <bean class="org.springframework.security.remoting.httpinvoker.AuthenticationSimpleHttpInvokerRequestExecutor" />\r
- </property>\r
- </bean>\r
-\r
- <bean id="descriptionService"\r
- class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
- <property name="serviceUrl">\r
- <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/description.service</value>\r
- </property>\r
- <property name="serviceInterface">\r
- <value>eu.etaxonomy.cdm.api.service.IDescriptionService</value>\r
- </property>\r
- <property name="httpInvokerRequestExecutor">\r
- <bean class="org.springframework.security.remoting.httpinvoker.AuthenticationSimpleHttpInvokerRequestExecutor" />\r
- </property>\r
- </bean>\r
- \r
- <bean id="editGeoService"\r
- class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
- <property name="serviceUrl">\r
- <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/editgeo.service</value>\r
- </property>\r
- <property name="serviceInterface">\r
- <value>eu.etaxonomy.cdm.ext.geo.IEditGeoService</value>\r
- </property>\r
- <property name="httpInvokerRequestExecutor">\r
- <bean class="org.springframework.security.remoting.httpinvoker.AuthenticationSimpleHttpInvokerRequestExecutor" />\r
- </property>\r
- </bean>\r
-\r
- <bean id="featureNodeService"\r
- class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
- <property name="serviceUrl">\r
- <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/featurenode.service</value>\r
- </property>\r
- <property name="serviceInterface">\r
- <value>eu.etaxonomy.cdm.api.service.IFeatureNodeService</value>\r
- </property>\r
- <property name="httpInvokerRequestExecutor">\r
- <bean class="org.springframework.security.remoting.httpinvoker.AuthenticationSimpleHttpInvokerRequestExecutor" />\r
- </property>\r
- </bean>\r
-\r
- <bean id="featureTreeService"\r
- class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
- <property name="serviceUrl">\r
- <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/featuretree.service</value>\r
- </property>\r
- <property name="serviceInterface">\r
- <value>eu.etaxonomy.cdm.api.service.IFeatureTreeService</value>\r
- </property>\r
- <property name="httpInvokerRequestExecutor">\r
- <bean class="org.springframework.security.remoting.httpinvoker.AuthenticationSimpleHttpInvokerRequestExecutor" />\r
- </property>\r
- </bean>\r
-\r
- <bean id="groupService"\r
- class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
- <property name="serviceUrl">\r
- <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/group.service</value>\r
- </property>\r
- <property name="serviceInterface">\r
- <value>eu.etaxonomy.cdm.api.service.IGroupService</value>\r
- </property>\r
- <property name="httpInvokerRequestExecutor">\r
- <bean class="org.springframework.security.remoting.httpinvoker.AuthenticationSimpleHttpInvokerRequestExecutor" />\r
- </property>\r
- </bean>\r
-\r
- <bean id="identificationKeyService"\r
- class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
- <property name="serviceUrl">\r
- <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/identificationkey.service</value>\r
- </property>\r
- <property name="serviceInterface">\r
- <value>eu.etaxonomy.cdm.api.service.IIdentificationKeyService</value>\r
- </property>\r
- <property name="httpInvokerRequestExecutor">\r
- <bean class="org.springframework.security.remoting.httpinvoker.AuthenticationSimpleHttpInvokerRequestExecutor" />\r
- </property>\r
- </bean>\r
-\r
- <bean id="locationService"\r
- class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
- <property name="serviceUrl">\r
- <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/location.service</value>\r
- </property>\r
- <property name="serviceInterface">\r
- <value>eu.etaxonomy.cdm.api.service.ILocationService</value>\r
- </property>\r
- <property name="httpInvokerRequestExecutor">\r
- <bean class="org.springframework.security.remoting.httpinvoker.AuthenticationSimpleHttpInvokerRequestExecutor" />\r
- </property>\r
- </bean>\r
-\r
- <bean id="markerService"\r
- class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
- <property name="serviceUrl">\r
- <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/marker.service</value>\r
- </property>\r
- <property name="serviceInterface">\r
- <value>eu.etaxonomy.cdm.api.service.IMarkerService</value>\r
- </property>\r
- <property name="httpInvokerRequestExecutor">\r
- <bean class="org.springframework.security.remoting.httpinvoker.AuthenticationSimpleHttpInvokerRequestExecutor" />\r
- </property>\r
- </bean>\r
-\r
- <bean id="mediaService"\r
- class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
- <property name="serviceUrl">\r
- <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/media.service</value>\r
- </property>\r
- <property name="serviceInterface">\r
- <value>eu.etaxonomy.cdm.api.service.IMediaService</value>\r
- </property>\r
- <property name="httpInvokerRequestExecutor">\r
- <bean class="org.springframework.security.remoting.httpinvoker.AuthenticationSimpleHttpInvokerRequestExecutor" />\r
- </property>\r
- </bean>\r
-\r
- <bean id="nameService"\r
- class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
- <property name="serviceUrl">\r
- <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/name.service</value>\r
- </property>\r
- <property name="serviceInterface">\r
- <value>eu.etaxonomy.cdm.api.service.INameService</value>\r
- </property>\r
- <property name="httpInvokerRequestExecutor">\r
- <bean class="org.springframework.security.remoting.httpinvoker.AuthenticationSimpleHttpInvokerRequestExecutor" />\r
- </property>\r
- </bean>\r
-\r
- <bean id="occurrenceService"\r
- class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
- <property name="serviceUrl">\r
- <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/occurrence.service</value>\r
- </property>\r
- <property name="serviceInterface">\r
- <value>eu.etaxonomy.cdm.api.service.IOccurrenceService</value>\r
- </property>\r
- <property name="httpInvokerRequestExecutor">\r
- <bean class="org.springframework.security.remoting.httpinvoker.AuthenticationSimpleHttpInvokerRequestExecutor" />\r
- </property>\r
- </bean>\r
-\r
- <bean id="polytomousKeyNodeService"\r
- class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
- <property name="serviceUrl">\r
- <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/polytomouskeynode.service</value>\r
- </property>\r
- <property name="serviceInterface">\r
- <value>eu.etaxonomy.cdm.api.service.IPolytomousKeyNodeService</value>\r
- </property>\r
- <property name="httpInvokerRequestExecutor">\r
- <bean class="org.springframework.security.remoting.httpinvoker.AuthenticationSimpleHttpInvokerRequestExecutor" />\r
- </property>\r
- </bean>\r
-\r
- <bean id="polytomousKeyService"\r
- class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
- <property name="serviceUrl">\r
- <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/polytomouskey.service</value>\r
- </property>\r
- <property name="serviceInterface">\r
- <value>eu.etaxonomy.cdm.api.service.IPolytomousKeyService</value>\r
- </property>\r
- <property name="httpInvokerRequestExecutor">\r
- <bean class="org.springframework.security.remoting.httpinvoker.AuthenticationSimpleHttpInvokerRequestExecutor" />\r
- </property>\r
- </bean>\r
-\r
- <bean id="referenceService"\r
- class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
- <property name="serviceUrl">\r
- <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/reference.service</value>\r
- </property>\r
- <property name="serviceInterface">\r
- <value>eu.etaxonomy.cdm.api.service.IReferenceService</value>\r
- </property>\r
- <property name="httpInvokerRequestExecutor">\r
- <bean class="org.springframework.security.remoting.httpinvoker.AuthenticationSimpleHttpInvokerRequestExecutor" />\r
- </property>\r
- </bean>\r
- \r
-<!-- \r
- <bean id="serviceService"\r
- class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
- <property name="serviceUrl">\r
- <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/service.service</value>\r
- </property>\r
- <property name="serviceInterface">\r
- <value>eu.etaxonomy.cdm.api.service.IService</value>\r
- </property>\r
- </bean>\r
- -->\r
- \r
- <bean id="taxonNodeService"\r
- class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
- <property name="serviceUrl">\r
- <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/taxonnode.service</value>\r
- </property>\r
- <property name="serviceInterface">\r
- <value>eu.etaxonomy.cdm.api.service.ITaxonNodeService</value>\r
- </property>\r
- <property name="httpInvokerRequestExecutor">\r
- <bean class="org.springframework.security.remoting.httpinvoker.AuthenticationSimpleHttpInvokerRequestExecutor" />\r
- </property>\r
- </bean>\r
-\r
- <bean id="taxonService"\r
- class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
- <property name="serviceUrl">\r
- <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/taxon.service</value>\r
- </property>\r
- <property name="serviceInterface">\r
- <value>eu.etaxonomy.cdm.api.service.ITaxonService</value>\r
- </property>\r
- <property name="httpInvokerRequestExecutor">\r
- <bean class="org.springframework.security.remoting.httpinvoker.AuthenticationSimpleHttpInvokerRequestExecutor" />\r
- </property>\r
- </bean>\r
-\r
- <bean id="termService"\r
- class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
- <property name="serviceUrl">\r
- <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/term.service</value>\r
- </property>\r
- <property name="serviceInterface">\r
- <value>eu.etaxonomy.cdm.api.service.ITermService</value>\r
- </property>\r
- <property name="httpInvokerRequestExecutor">\r
- <bean class="org.springframework.security.remoting.httpinvoker.AuthenticationSimpleHttpInvokerRequestExecutor" />\r
- </property>\r
- </bean>\r
-\r
- <bean id="userService"\r
- class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
- <property name="serviceUrl">\r
- <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/user.service</value>\r
- </property>\r
- <property name="serviceInterface">\r
- <value>eu.etaxonomy.cdm.api.service.IUserService</value>\r
- </property>\r
- <property name="httpInvokerRequestExecutor">\r
- <bean class="org.springframework.security.remoting.httpinvoker.AuthenticationSimpleHttpInvokerRequestExecutor" />\r
- </property>\r
- </bean>\r
-\r
- <bean id="vocabularyService"\r
- class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
- <property name="serviceUrl">\r
- <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/vocabulary.service</value>\r
- </property>\r
- <property name="serviceInterface">\r
- <value>eu.etaxonomy.cdm.api.service.IVocabularyService</value>\r
- </property>\r
- <property name="httpInvokerRequestExecutor">\r
- <bean class="org.springframework.security.remoting.httpinvoker.AuthenticationSimpleHttpInvokerRequestExecutor" />\r
- </property>\r
- </bean>\r
-\r
- <bean id="workingSetService"\r
- class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
- <property name="serviceUrl">\r
- <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/workingset.service</value>\r
- </property>\r
- <property name="serviceInterface">\r
- <value>eu.etaxonomy.cdm.api.service.IWorkingSetService</value>\r
- </property>\r
- <property name="httpInvokerRequestExecutor">\r
- <bean class="org.springframework.security.remoting.httpinvoker.AuthenticationSimpleHttpInvokerRequestExecutor" />\r
- </property>\r
- </bean>\r
- \r
- <bean id="grantedAuthorityService"\r
- class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
- <property name="serviceUrl">\r
- <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/grantedauthority.service</value>\r
- </property>\r
- <property name="serviceInterface">\r
- <value>eu.etaxonomy.cdm.api.service.IGrantedAuthorityService</value>\r
- </property>\r
- <property name="httpInvokerRequestExecutor">\r
- <bean class="org.springframework.security.remoting.httpinvoker.AuthenticationSimpleHttpInvokerRequestExecutor" />\r
- </property>\r
- </bean>\r
- \r
- <bean id="databaseService"\r
- class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
- <property name="serviceUrl">\r
- <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/database.service</value>\r
- </property>\r
- <property name="serviceInterface">\r
- <value>eu.etaxonomy.cdm.api.service.IDatabaseService</value>\r
- </property>\r
- <property name="httpInvokerRequestExecutor">\r
- <bean class="org.springframework.security.remoting.httpinvoker.AuthenticationSimpleHttpInvokerRequestExecutor" />\r
- </property>\r
- </bean>\r
- \r
- <bean id="lsidAuthorityService"\r
- class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
- <property name="serviceUrl">\r
- <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/lsidauthoruty.service</value>\r
- </property>\r
- <property name="serviceInterface">\r
- <value>eu.etaxonomy.cdm.api.service.lsid.LSIDAuthorityService</value>\r
- </property>\r
- <property name="httpInvokerRequestExecutor">\r
- <bean class="org.springframework.security.remoting.httpinvoker.AuthenticationSimpleHttpInvokerRequestExecutor" />\r
- </property>\r
- </bean>\r
- \r
- <bean id="lsidMetadataService"\r
- class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
- <property name="serviceUrl">\r
- <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/lsidmetadata.service</value>\r
- </property>\r
- <property name="serviceInterface">\r
- <value>eu.etaxonomy.cdm.api.service.lsid.LSIDMetadataService</value>\r
- </property>\r
- <property name="httpInvokerRequestExecutor">\r
- <bean class="org.springframework.security.remoting.httpinvoker.AuthenticationSimpleHttpInvokerRequestExecutor" />\r
- </property>\r
- </bean>\r
- \r
- <bean id="lsiDataService"\r
- class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
- <property name="serviceUrl">\r
- <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/lsiddata.service</value>\r
- </property>\r
- <property name="serviceInterface">\r
- <value>eu.etaxonomy.cdm.api.service.lsid.LSIDDataService</value>\r
- </property>\r
- <property name="httpInvokerRequestExecutor">\r
- <bean class="org.springframework.security.remoting.httpinvoker.AuthenticationSimpleHttpInvokerRequestExecutor" />\r
- </property>\r
- </bean>\r
-\r
- <bean id="providerManager"\r
- class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
- <property name="serviceUrl">\r
- <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/authenticationManager.service</value>\r
- </property>\r
- <property name="serviceInterface">\r
- <value>org.springframework.security.authentication.AuthenticationManager</value>\r
- </property>\r
- <property name="httpInvokerRequestExecutor">\r
- <bean class="org.springframework.security.remoting.httpinvoker.AuthenticationSimpleHttpInvokerRequestExecutor" />\r
- </property>\r
- </bean>\r
- \r
- <bean id="primerService"\r
- class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
- <property name="serviceUrl">\r
- <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/primer.service</value>\r
- </property>\r
- <property name="serviceInterface">\r
- <value>eu.etaxonomy.cdm.api.service.molecular.IPrimerService</value>\r
- </property>\r
- <property name="httpInvokerRequestExecutor">\r
- <bean class="org.springframework.security.remoting.httpinvoker.AuthenticationSimpleHttpInvokerRequestExecutor" />\r
- </property>\r
- </bean>\r
- \r
- <bean id="amplificationService"\r
- class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
- <property name="serviceUrl">\r
- <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/amplification.service</value>\r
- </property>\r
- <property name="serviceInterface">\r
- <value>eu.etaxonomy.cdm.api.service.molecular.IAmplificationService</value>\r
- </property>\r
- <property name="httpInvokerRequestExecutor">\r
- <bean class="org.springframework.security.remoting.httpinvoker.AuthenticationSimpleHttpInvokerRequestExecutor" />\r
- </property>\r
- </bean>\r
- \r
- <bean id="sequenceService"\r
- class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
- <property name="serviceUrl">\r
- <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/sequence.service</value>\r
- </property>\r
- <property name="serviceInterface">\r
- <value>eu.etaxonomy.cdm.api.service.molecular.ISequenceService</value>\r
- </property>\r
- <property name="httpInvokerRequestExecutor">\r
- <bean class="org.springframework.security.remoting.httpinvoker.AuthenticationSimpleHttpInvokerRequestExecutor" />\r
- </property>\r
- </bean>\r
+ xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xmlns:context="http://www.springframework.org/schema/context"\r
+ xmlns:tx="http://www.springframework.org/schema/tx"\r
+ xsi:schemaLocation="http://www.springframework.org/schema/beans http://www.springframework.org/schema/beans/spring-beans-3.1.xsd\r
+ http://www.springframework.org/schema/tx http://www.springframework.org/schema/tx/spring-tx-3.1.xsd\r
+ http://www.springframework.org/schema/context http://www.springframework.org/schema/context/spring-context-3.1.xsd">\r
+\r
+\r
+ <bean id="agentService" lazy-init="true"\r
+ class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
+ <property name="serviceUrl">\r
+ <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/agent.service\r
+ </value>\r
+ </property>\r
+ <property name="serviceInterface">\r
+ <value>eu.etaxonomy.cdm.api.service.IAgentService</value>\r
+ </property>\r
+ <property name="httpInvokerRequestExecutor">\r
+ <bean class="eu.etaxonomy.taxeditor.service.CdmServiceRequestExecutor">\r
+ <property name="readTimeout" value="0" />\r
+ </bean>\r
+ </property>\r
+ </bean>\r
+\r
+ <bean id="annotationService" lazy-init="true"\r
+ class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
+ <property name="serviceUrl">\r
+ <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/annotation.service\r
+ </value>\r
+ </property>\r
+ <property name="serviceInterface">\r
+ <value>eu.etaxonomy.cdm.api.service.IAnnotationService</value>\r
+ </property>\r
+ <property name="httpInvokerRequestExecutor">\r
+ <bean class="eu.etaxonomy.taxeditor.service.CdmServiceRequestExecutor">\r
+ <property name="readTimeout" value="0" />\r
+ </bean>\r
+ </property>\r
+ </bean>\r
+\r
+ <bean id="auditeventService" lazy-init="true"\r
+ class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
+ <property name="serviceUrl">\r
+ <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/auditevent.service\r
+ </value>\r
+ </property>\r
+ <property name="serviceInterface">\r
+ <value>eu.etaxonomy.cdm.api.service.IAuditEventService</value>\r
+ </property>\r
+ <property name="httpInvokerRequestExecutor">\r
+ <bean class="eu.etaxonomy.taxeditor.service.CdmServiceRequestExecutor">\r
+ <property name="readTimeout" value="0" />\r
+ </bean>\r
+ </property>\r
+ </bean>\r
+\r
+ <bean id="classificationService" lazy-init="true"\r
+ class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
+ <property name="serviceUrl">\r
+ <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/classification.service\r
+ </value>\r
+ </property>\r
+ <property name="serviceInterface">\r
+ <value>eu.etaxonomy.cdm.api.service.IClassificationService</value>\r
+ </property>\r
+ <property name="httpInvokerRequestExecutor">\r
+ <bean class="eu.etaxonomy.taxeditor.service.CdmServiceRequestExecutor">\r
+ <property name="readTimeout" value="0" />\r
+ </bean>\r
+ </property>\r
+ </bean>\r
+\r
+ <bean id="collectionService" lazy-init="true"\r
+ class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
+ <property name="serviceUrl">\r
+ <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/collection.service\r
+ </value>\r
+ </property>\r
+ <property name="serviceInterface">\r
+ <value>eu.etaxonomy.cdm.api.service.ICollectionService</value>\r
+ </property>\r
+ <property name="httpInvokerRequestExecutor">\r
+ <bean class="eu.etaxonomy.taxeditor.service.CdmServiceRequestExecutor">\r
+ <property name="readTimeout" value="0" />\r
+ </bean>\r
+ </property>\r
+ </bean>\r
+\r
+ <bean id="commonService" lazy-init="true"\r
+ class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
+ <property name="serviceUrl">\r
+ <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/common.service\r
+ </value>\r
+ </property>\r
+ <property name="serviceInterface">\r
+ <value>eu.etaxonomy.cdm.api.service.ICommonService</value>\r
+ </property>\r
+ <property name="httpInvokerRequestExecutor">\r
+ <bean class="eu.etaxonomy.taxeditor.service.CdmServiceRequestExecutor">\r
+ <property name="readTimeout" value="0" />\r
+ </bean>\r
+ </property>\r
+ </bean>\r
+\r
+ <bean id="descriptionService" lazy-init="true"\r
+ class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
+ <property name="serviceUrl">\r
+ <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/description.service\r
+ </value>\r
+ </property>\r
+ <property name="serviceInterface">\r
+ <value>eu.etaxonomy.cdm.api.service.IDescriptionService</value>\r
+ </property>\r
+ <property name="httpInvokerRequestExecutor">\r
+ <bean class="eu.etaxonomy.taxeditor.service.CdmServiceRequestExecutor">\r
+ <property name="readTimeout" value="0" />\r
+ </bean>\r
+ </property>\r
+ </bean>\r
+\r
+ <bean id="editGeoService" lazy-init="true"\r
+ class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
+ <property name="serviceUrl">\r
+ <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/editgeo.service\r
+ </value>\r
+ </property>\r
+ <property name="serviceInterface">\r
+ <value>eu.etaxonomy.cdm.ext.geo.IEditGeoService</value>\r
+ </property>\r
+ <property name="httpInvokerRequestExecutor">\r
+ <bean class="eu.etaxonomy.taxeditor.service.CdmServiceRequestExecutor">\r
+ <property name="readTimeout" value="0" />\r
+ </bean>\r
+ </property>\r
+ </bean>\r
+\r
+ <bean id="featureNodeService" lazy-init="true"\r
+ class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
+ <property name="serviceUrl">\r
+ <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/featurenode.service\r
+ </value>\r
+ </property>\r
+ <property name="serviceInterface">\r
+ <value>eu.etaxonomy.cdm.api.service.IFeatureNodeService</value>\r
+ </property>\r
+ <property name="httpInvokerRequestExecutor">\r
+ <bean class="eu.etaxonomy.taxeditor.service.CdmServiceRequestExecutor">\r
+ <property name="readTimeout" value="0" />\r
+ </bean>\r
+ </property>\r
+ </bean>\r
+\r
+ <bean id="featureTreeService" lazy-init="true"\r
+ class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
+ <property name="serviceUrl">\r
+ <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/featuretree.service\r
+ </value>\r
+ </property>\r
+ <property name="serviceInterface">\r
+ <value>eu.etaxonomy.cdm.api.service.IFeatureTreeService</value>\r
+ </property>\r
+ <property name="httpInvokerRequestExecutor">\r
+ <bean class="eu.etaxonomy.taxeditor.service.CdmServiceRequestExecutor">\r
+ <property name="readTimeout" value="0" />\r
+ </bean>\r
+ </property>\r
+ </bean>\r
+\r
+ <bean id="groupService" lazy-init="true"\r
+ class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
+ <property name="serviceUrl">\r
+ <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/group.service\r
+ </value>\r
+ </property>\r
+ <property name="serviceInterface">\r
+ <value>eu.etaxonomy.cdm.api.service.IGroupService</value>\r
+ </property>\r
+ <property name="httpInvokerRequestExecutor">\r
+ <bean class="eu.etaxonomy.taxeditor.service.CdmServiceRequestExecutor">\r
+ <property name="readTimeout" value="0" />\r
+ </bean>\r
+ </property>\r
+ </bean>\r
+\r
+ <bean id="identificationKeyService" lazy-init="true"\r
+ class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
+ <property name="serviceUrl">\r
+ <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/identificationkey.service\r
+ </value>\r
+ </property>\r
+ <property name="serviceInterface">\r
+ <value>eu.etaxonomy.cdm.api.service.IIdentificationKeyService\r
+ </value>\r
+ </property>\r
+ <property name="httpInvokerRequestExecutor">\r
+ <bean class="eu.etaxonomy.taxeditor.service.CdmServiceRequestExecutor">\r
+ <property name="readTimeout" value="0" />\r
+ </bean>\r
+ </property>\r
+ </bean>\r
+\r
+ <bean id="locationService" lazy-init="true"\r
+ class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
+ <property name="serviceUrl">\r
+ <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/location.service\r
+ </value>\r
+ </property>\r
+ <property name="serviceInterface">\r
+ <value>eu.etaxonomy.cdm.api.service.ILocationService</value>\r
+ </property>\r
+ <property name="httpInvokerRequestExecutor">\r
+ <bean class="eu.etaxonomy.taxeditor.service.CdmServiceRequestExecutor">\r
+ <property name="readTimeout" value="0" />\r
+ </bean>\r
+ </property>\r
+ </bean>\r
+\r
+ <bean id="markerService" lazy-init="true"\r
+ class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
+ <property name="serviceUrl">\r
+ <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/marker.service\r
+ </value>\r
+ </property>\r
+ <property name="serviceInterface">\r
+ <value>eu.etaxonomy.cdm.api.service.IMarkerService</value>\r
+ </property>\r
+ <property name="httpInvokerRequestExecutor">\r
+ <bean class="eu.etaxonomy.taxeditor.service.CdmServiceRequestExecutor">\r
+ <property name="readTimeout" value="0" />\r
+ </bean>\r
+ </property>\r
+ </bean>\r
+\r
+ <bean id="mediaService" lazy-init="true"\r
+ class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
+ <property name="serviceUrl">\r
+ <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/media.service\r
+ </value>\r
+ </property>\r
+ <property name="serviceInterface">\r
+ <value>eu.etaxonomy.cdm.api.service.IMediaService</value>\r
+ </property>\r
+ <property name="httpInvokerRequestExecutor">\r
+ <bean class="eu.etaxonomy.taxeditor.service.CdmServiceRequestExecutor">\r
+ <property name="readTimeout" value="0" />\r
+ </bean>\r
+ </property>\r
+ </bean>\r
+\r
+ <bean id="nameService" lazy-init="true"\r
+ class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
+ <property name="serviceUrl">\r
+ <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/name.service\r
+ </value>\r
+ </property>\r
+ <property name="serviceInterface">\r
+ <value>eu.etaxonomy.cdm.api.service.INameService</value>\r
+ </property>\r
+ <property name="httpInvokerRequestExecutor">\r
+ <bean class="eu.etaxonomy.taxeditor.service.CdmServiceRequestExecutor">\r
+ <property name="readTimeout" value="0" />\r
+ </bean>\r
+ </property>\r
+ </bean>\r
+\r
+ <bean id="occurrenceService" lazy-init="true"\r
+ class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
+ <property name="serviceUrl">\r
+ <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/occurrence.service\r
+ </value>\r
+ </property>\r
+ <property name="serviceInterface">\r
+ <value>eu.etaxonomy.cdm.api.service.IOccurrenceService</value>\r
+ </property>\r
+ <property name="httpInvokerRequestExecutor">\r
+ <bean class="eu.etaxonomy.taxeditor.service.CdmServiceRequestExecutor">\r
+ <property name="readTimeout" value="0" />\r
+ </bean>\r
+ </property>\r
+ </bean>\r
+\r
+ <bean id="polytomousKeyNodeService" lazy-init="true"\r
+ class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
+ <property name="serviceUrl">\r
+ <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/polytomouskeynode.service\r
+ </value>\r
+ </property>\r
+ <property name="serviceInterface">\r
+ <value>eu.etaxonomy.cdm.api.service.IPolytomousKeyNodeService\r
+ </value>\r
+ </property>\r
+ <property name="httpInvokerRequestExecutor">\r
+ <bean class="eu.etaxonomy.taxeditor.service.CdmServiceRequestExecutor">\r
+ <property name="readTimeout" value="0" />\r
+ </bean>\r
+ </property>\r
+ </bean>\r
+\r
+ <bean id="polytomousKeyService" lazy-init="true"\r
+ class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
+ <property name="serviceUrl">\r
+ <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/polytomouskey.service\r
+ </value>\r
+ </property>\r
+ <property name="serviceInterface">\r
+ <value>eu.etaxonomy.cdm.api.service.IPolytomousKeyService</value>\r
+ </property>\r
+ <property name="httpInvokerRequestExecutor">\r
+ <bean class="eu.etaxonomy.taxeditor.service.CdmServiceRequestExecutor">\r
+ <property name="readTimeout" value="0" />\r
+ </bean>\r
+ </property>\r
+ </bean>\r
+\r
+ <bean id="referenceService" lazy-init="true"\r
+ class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
+ <property name="serviceUrl">\r
+ <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/reference.service\r
+ </value>\r
+ </property>\r
+ <property name="serviceInterface">\r
+ <value>eu.etaxonomy.cdm.api.service.IReferenceService</value>\r
+ </property>\r
+ <property name="httpInvokerRequestExecutor">\r
+ <bean class="eu.etaxonomy.taxeditor.service.CdmServiceRequestExecutor">\r
+ <property name="readTimeout" value="0" />\r
+ </bean>\r
+ </property>\r
+ </bean>\r
+\r
+ <bean id="taxonNodeService" lazy-init="true"\r
+ class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
+ <property name="serviceUrl">\r
+ <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/taxonnode.service\r
+ </value>\r
+ </property>\r
+ <property name="serviceInterface">\r
+ <value>eu.etaxonomy.cdm.api.service.ITaxonNodeService</value>\r
+ </property>\r
+ <property name="httpInvokerRequestExecutor">\r
+ <bean class="eu.etaxonomy.taxeditor.service.CdmServiceRequestExecutor">\r
+ <property name="readTimeout" value="0" />\r
+ </bean>\r
+ </property>\r
+ </bean>\r
+\r
+ <bean id="taxonService" lazy-init="true"\r
+ class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
+ <property name="serviceUrl">\r
+ <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/taxon.service\r
+ </value>\r
+ </property>\r
+ <property name="serviceInterface">\r
+ <value>eu.etaxonomy.cdm.api.service.ITaxonService</value>\r
+ </property>\r
+ <property name="httpInvokerRequestExecutor">\r
+ <bean class="eu.etaxonomy.taxeditor.service.CdmServiceRequestExecutor">\r
+ <property name="readTimeout" value="0" />\r
+ </bean>\r
+ </property>\r
+ </bean>\r
+\r
+ <bean id="termService" lazy-init="true"\r
+ class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
+ <property name="serviceUrl">\r
+ <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/term.service\r
+ </value>\r
+ </property>\r
+ <property name="serviceInterface">\r
+ <value>eu.etaxonomy.cdm.api.service.ITermService</value>\r
+ </property>\r
+ <property name="httpInvokerRequestExecutor">\r
+ <bean class="eu.etaxonomy.taxeditor.service.TermServiceRequestExecutor">\r
+ <property name="readTimeout" value="0" />\r
+ </bean>\r
+ </property>\r
+ </bean>\r
+\r
+ <bean id="userService" lazy-init="true"\r
+ class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
+ <property name="serviceUrl">\r
+ <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting-public/user.service\r
+ </value>\r
+ </property>\r
+ <property name="serviceInterface">\r
+ <value>eu.etaxonomy.cdm.api.service.IUserService</value>\r
+ </property>\r
+ <property name="httpInvokerRequestExecutor">\r
+ <bean\r
+ class="eu.etaxonomy.taxeditor.service.CdmServiceRequestExecutor">\r
+ <property name="readTimeout" value="0" />\r
+ </bean>\r
+ </property>\r
+ </bean>\r
+\r
+ <bean id="vocabularyService" lazy-init="true"\r
+ class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
+ <property name="serviceUrl">\r
+ <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/vocabulary.service\r
+ </value>\r
+ </property>\r
+ <property name="serviceInterface">\r
+ <value>eu.etaxonomy.cdm.api.service.IVocabularyService</value>\r
+ </property>\r
+ <property name="httpInvokerRequestExecutor">\r
+ <bean class="eu.etaxonomy.taxeditor.service.CdmServiceRequestExecutor">\r
+ <property name="readTimeout" value="0" />\r
+ </bean>\r
+ </property>\r
+ </bean>\r
+\r
+ <bean id="workingSetService" lazy-init="true"\r
+ class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
+ <property name="serviceUrl">\r
+ <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/workingset.service\r
+ </value>\r
+ </property>\r
+ <property name="serviceInterface">\r
+ <value>eu.etaxonomy.cdm.api.service.IWorkingSetService</value>\r
+ </property>\r
+ <property name="httpInvokerRequestExecutor">\r
+ <bean class="eu.etaxonomy.taxeditor.service.CdmServiceRequestExecutor">\r
+ <property name="readTimeout" value="0" />\r
+ </bean>\r
+ </property>\r
+ </bean>\r
+\r
+ <bean id="grantedAuthorityService" lazy-init="true"\r
+ class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
+ <property name="serviceUrl">\r
+ <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/grantedauthority.service\r
+ </value>\r
+ </property>\r
+ <property name="serviceInterface">\r
+ <value>eu.etaxonomy.cdm.api.service.IGrantedAuthorityService\r
+ </value>\r
+ </property>\r
+ <property name="httpInvokerRequestExecutor">\r
+ <bean class="eu.etaxonomy.taxeditor.service.CdmServiceRequestExecutor">\r
+ <property name="readTimeout" value="0" />\r
+ </bean>\r
+ </property>\r
+ </bean>\r
+\r
+ <bean id="databaseService" lazy-init="true"\r
+ class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
+ <property name="serviceUrl">\r
+ <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/database.service\r
+ </value>\r
+ </property>\r
+ <property name="serviceInterface">\r
+ <value>eu.etaxonomy.cdm.api.service.IDatabaseService</value>\r
+ </property>\r
+ <property name="httpInvokerRequestExecutor">\r
+ <bean class="eu.etaxonomy.taxeditor.service.CdmServiceRequestExecutor">\r
+ <property name="readTimeout" value="0" />\r
+ </bean>\r
+ </property>\r
+ </bean>\r
+\r
+ <bean id="lsidAuthorityService" lazy-init="true"\r
+ class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
+ <property name="serviceUrl">\r
+ <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/lsidauthoruty.service\r
+ </value>\r
+ </property>\r
+ <property name="serviceInterface">\r
+ <value>eu.etaxonomy.cdm.api.service.lsid.LSIDAuthorityService\r
+ </value>\r
+ </property>\r
+ <property name="httpInvokerRequestExecutor">\r
+ <bean class="eu.etaxonomy.taxeditor.service.CdmServiceRequestExecutor">\r
+ <property name="readTimeout" value="0" />\r
+ </bean>\r
+ </property>\r
+ </bean>\r
+\r
+ <bean id="lsidMetadataService" lazy-init="true"\r
+ class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
+ <property name="serviceUrl">\r
+ <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/lsidmetadata.service\r
+ </value>\r
+ </property>\r
+ <property name="serviceInterface">\r
+ <value>eu.etaxonomy.cdm.api.service.lsid.LSIDMetadataService\r
+ </value>\r
+ </property>\r
+ <property name="httpInvokerRequestExecutor">\r
+ <bean class="eu.etaxonomy.taxeditor.service.CdmServiceRequestExecutor">\r
+ <property name="readTimeout" value="0" />\r
+ </bean>\r
+ </property>\r
+ </bean>\r
+\r
+ <bean id="lsiDataService" lazy-init="true"\r
+ class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
+ <property name="serviceUrl">\r
+ <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/lsiddata.service\r
+ </value>\r
+ </property>\r
+ <property name="serviceInterface">\r
+ <value>eu.etaxonomy.cdm.api.service.lsid.LSIDDataService</value>\r
+ </property>\r
+ <property name="httpInvokerRequestExecutor">\r
+ <bean class="eu.etaxonomy.taxeditor.service.CdmServiceRequestExecutor">\r
+ <property name="readTimeout" value="0" />\r
+ </bean>\r
+ </property>\r
+ </bean>\r
+\r
+\r
+\r
+ <bean id="primerService" lazy-init="true"\r
+ class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
+ <property name="serviceUrl">\r
+ <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/primer.service\r
+ </value>\r
+ </property>\r
+ <property name="serviceInterface">\r
+ <value>eu.etaxonomy.cdm.api.service.molecular.IPrimerService\r
+ </value>\r
+ </property>\r
+ <property name="httpInvokerRequestExecutor">\r
+ <bean class="eu.etaxonomy.taxeditor.service.CdmServiceRequestExecutor">\r
+ <property name="readTimeout" value="0" />\r
+ </bean>\r
+ </property>\r
+ </bean>\r
+\r
+ <bean id="amplificationService" lazy-init="true"\r
+ class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
+ <property name="serviceUrl">\r
+ <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/amplification.service\r
+ </value>\r
+ </property>\r
+ <property name="serviceInterface">\r
+ <value>eu.etaxonomy.cdm.api.service.molecular.IAmplificationService\r
+ </value>\r
+ </property>\r
+ <property name="httpInvokerRequestExecutor">\r
+ <bean class="eu.etaxonomy.taxeditor.service.CdmServiceRequestExecutor">\r
+ <property name="readTimeout" value="0" />\r
+ </bean>\r
+ </property>\r
+ </bean>\r
+\r
+ <bean id="sequenceService" lazy-init="true"\r
+ class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
+ <property name="serviceUrl">\r
+ <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/sequence.service\r
+ </value>\r
+ </property>\r
+ <property name="serviceInterface">\r
+ <value>eu.etaxonomy.cdm.api.service.molecular.ISequenceService\r
+ </value>\r
+ </property>\r
+ <property name="httpInvokerRequestExecutor">\r
+ <bean class="eu.etaxonomy.taxeditor.service.CdmServiceRequestExecutor">\r
+ <property name="readTimeout" value="0" />\r
+ </bean>\r
+ </property>\r
+ </bean>\r
+\r
+ <bean id="entityValidationService" lazy-init="true"\r
+ class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
+ <property name="serviceUrl">\r
+ <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/entityvalidation.service\r
+ </value>\r
+ </property>\r
+ <property name="serviceInterface">\r
+ <value>eu.etaxonomy.cdm.api.service.IEntityValidationService\r
+ </value>\r
+ </property>\r
+ <property name="httpInvokerRequestExecutor">\r
+ <bean class="eu.etaxonomy.taxeditor.service.CdmServiceRequestExecutor">\r
+ <property name="readTimeout" value="0" />\r
+ </bean>\r
+ </property>\r
+ </bean>\r
+\r
+ <bean id="entityConstraintViolationService" lazy-init="true"\r
+ class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
+ <property name="serviceUrl">\r
+ <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/entityconstraintviolation.service\r
+ </value>\r
+ </property>\r
+ <property name="serviceInterface">\r
+ <value>eu.etaxonomy.cdm.api.service.IEntityConstraintViolationService\r
+ </value>\r
+ </property>\r
+ <property name="httpInvokerRequestExecutor">\r
+ <bean class="eu.etaxonomy.taxeditor.service.CdmServiceRequestExecutor">\r
+ <property name="readTimeout" value="0" />\r
+ </bean>\r
+ </property>\r
+ </bean>\r
+ \r
+ <bean id="ioService" lazy-init="true"\r
+ class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
+ <property name="serviceUrl">\r
+ <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/io.service\r
+ </value>\r
+ </property>\r
+ <property name="serviceInterface">\r
+ <value>eu.etaxonomy.cdm.io.service.IIOService\r
+ </value>\r
+ </property>\r
+ <property name="httpInvokerRequestExecutor">\r
+ <bean class="eu.etaxonomy.taxeditor.service.CdmAuthenticatedHttpInvokerRequestExecutor">\r
+ <property name="readTimeout" value="0" />\r
+ </bean>\r
+ </property>\r
+ </bean>\r
+\r
+ <bean id="testService" lazy-init="true"\r
+ class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
+ <property name="serviceUrl">\r
+ <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/test.service\r
+ </value>\r
+ </property>\r
+ <property name="serviceInterface">\r
+ <value>eu.etaxonomy.cdm.api.service.ITestService\r
+ </value>\r
+ </property>\r
+ <property name="httpInvokerRequestExecutor">\r
+ <bean class="eu.etaxonomy.taxeditor.service.CdmServiceRequestExecutor">\r
+ <property name="readTimeout" value="0" />\r
+ </bean>\r
+ </property>\r
+\r
+ </bean>\r
\r
\r
\r
<?xml version="1.0" encoding="UTF-8"?>
<beans xmlns="http://www.springframework.org/schema/beans"
- xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
- xmlns:context="http://www.springframework.org/schema/context"
- xmlns:tx="http://www.springframework.org/schema/tx"
- xsi:schemaLocation="http://www.springframework.org/schema/beans http://www.springframework.org/schema/beans/spring-beans-3.2.xsd
+ xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xmlns:context="http://www.springframework.org/schema/context"
+ xmlns:tx="http://www.springframework.org/schema/tx"
+ xsi:schemaLocation="http://www.springframework.org/schema/beans http://www.springframework.org/schema/beans/spring-beans-3.2.xsd
http://www.springframework.org/schema/tx http://www.springframework.org/schema/tx/spring-tx-3.2.xsd
http://www.springframework.org/schema/context http://www.springframework.org/schema/context/spring-context-3.2.xsd">
-
-
- <!-- Default application context and term initializer -->
- <import resource="classpath:/eu/etaxonomy/cdm/defaultApplicationContext.xml"/>
+
+
+ <!-- Default application context and term initializer -->
+ <import resource="classpath:/eu/etaxonomy/cdm/defaultApplicationContext.xml" />
<bean id="persistentTermInitializer" class="eu.etaxonomy.cdm.database.PersistentTermInitializer">
<property name="omit" value="false" />
</bean>
-
- <import resource="classpath:/eu/etaxonomy/cdm/remote.xml"/>
- <import resource="classpath:eu/etaxonomy/cdm/remote/json/jsonConfigurations.xml"/>
-
- <context:component-scan base-package="eu/etaxonomy/cdm/ext"/>
-
+
+ <context:component-scan base-package="eu/etaxonomy/taxeditor/session" />
+ <import resource="classpath:/eu/etaxonomy/cdm/remote.xml" />
+ <import resource="classpath:eu/etaxonomy/cdm/remote/json/jsonConfigurations.xml" />
+
+ <context:component-scan base-package="eu/etaxonomy/cdm/ext" />
+
<context:component-scan base-package="eu/etaxonomy/cdm/remote">
- <context:exclude-filter type="regex" expression="eu\.etaxonomy\.cdm\.remote\.config\.DataSourceConfigurer" />
- <context:exclude-filter type="regex" expression="eu\.etaxonomy\.cdm\.remote\.config\.LoggingConfigurer" />
- <context:exclude-filter type="regex" expression="eu\.etaxonomy\.cdm\.remote\.view\.PatternViewResolver" />
- <context:exclude-filter type="regex" expression="eu\.etaxonomy\.cdm\.remote\.vaadin\..*" />
- <context:exclude-filter type="regex" expression="eu\.etaxonomy\.cdm\.remote\.controller\..*Portal.*" />
+ <context:exclude-filter type="regex"
+ expression="eu\.etaxonomy\.cdm\.remote\.config\.DataSourceConfigurer" />
+ <context:exclude-filter type="regex"
+ expression="eu\.etaxonomy\.cdm\.remote\.config\.LoggingConfigurer" />
+ <context:exclude-filter type="regex"
+ expression="eu\.etaxonomy\.cdm\.remote\.view\.PatternViewResolver" />
+ <context:exclude-filter type="regex"
+ expression="eu\.etaxonomy\.cdm\.remote\.vaadin\..*" />
+ <context:exclude-filter type="regex"
+ expression="eu\.etaxonomy\.cdm\.remote\.controller\..*Portal.*" />
</context:component-scan>
-
+
+ <context:component-scan base-package="eu/etaxonomy/taxeditor/remoting/session/mock" />
</beans>
--- /dev/null
+<?xml version="1.0" encoding="UTF-8"?>\r
+<!DOCTYPE hibernate-configuration PUBLIC\r
+ "-//Hibernate/Hibernate Configuration DTD 3.0//EN"\r
+ "http://www.hibernate.org/dtd/hibernate-configuration-3.0.dtd">\r
+\r
+<hibernate-configuration>\r
+ <session-factory>\r
+\r
+ <property name="connection.release_mode">after_transaction</property>\r
+\r
+ <!-- Connection Pooling -->\r
+<!-- <property name="hibernate.connection.provider_class">org.hibernate.service.jdbc.connections.internal.C3P0ConnectionProvider</property> -->\r
+ <property name="hibernate.connection.provider_class">org.hibernate.service.jdbc.connections.internal.DatasourceConnectionProviderImpl</property>\r
+ <!--\r
+ Configuring the C3P0ConnectionProvider\r
+ ========================================\r
+ see http://www.mchange.com/projects/c3p0/index.html#hibernate-specific\r
+ and also org.springframework.orm.hibernate3.AbstractSessionFactoryBean.setDataSource(DataSource dataSource)\r
+\r
+ IMPORTANT:\r
+ Because of the constraint (1) the org.hibernate.connection.C3P0ConnectionProvider are not be used\r
+ for the Cdm Library because it requires the dataSource bean in some cases.\r
+\r
+ (1)\r
+ Do NOT specify the dataSource in the sessionFactory for example in the\r
+ org.springframework.orm.hibernate3.LocalSessionFactoryBean\r
+ !!!==> If *dataSource* is set, this will override corresponding settings in Hibernate properties.!!!\r
+ If this is set, the Hibernate settings should not define a connection provider to\r
+ avoid meaningless double configuration.\r
+ (2)\r
+ Hibernate uses the hibernate.c3p0.max_size property to determine if c3p0\r
+ is beeing used. Therefore the max_size property MUST be set. - maybe not need in hibernate 3.4 +\r
+\r
+ (3) If you are using Hibernate's C3P0ConnectionProvider you must set the following properties\r
+ in your hibernate configuration, using hibernate-specific configuration keys.\r
+ All other properties must be defined as usual in a c3p0.properties file.\r
+ This is confusing, and will hopefully be simplified some time in the future, but for now...\r
+ \r
+ DOCUMENTATION UPDATE (2015-05-22):\r
+ Hibernate's C3P0ConnectionProvider renames 7 c3p0 configuration properties, which, \r
+ if set in your hibernate configuration, will override any configuration you may have set \r
+ in a c3p0.properties file.\r
+ TODO: are points (2) and (3) still valid? I don't think so! (AK)\r
+\r
+ hibernate.c3p0.acquire_increment\r
+ hibernate.c3p0.idle_test_period\r
+ hibernate.c3p0.timeout\r
+ hibernate.c3p0.max_size\r
+ hibernate.c3p0.max_statements\r
+ hibernate.c3p0.min_size\r
+ hibernate.c3p0.validate\r
+ -->\r
+ <mapping package="eu.etaxonomy.cdm.model.common"/>\r
+ <!-- Annotation Package -->\r
+ <mapping class="eu.etaxonomy.cdm.model.agent.Address"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.agent.AgentBase"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.agent.Contact"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.agent.Institution"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.agent.InstitutionalMembership"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.agent.Person"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.agent.Team"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.agent.TeamOrPersonBase"/>\r
+ <!-- Common Package -->\r
+ <mapping class="eu.etaxonomy.cdm.model.common.Annotation"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.common.AnnotationType"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.common.Credit"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.common.DefinedTerm"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.common.DefinedTermBase"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.common.Extension"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.common.ExtensionType"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.common.IdentifiableSource"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.common.Identifier"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.common.IntextReference"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.common.GrantedAuthorityImpl"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.common.Group"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.common.Language"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.common.LanguageString"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.common.LSID"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.common.LSIDAuthority"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.common.Marker"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.common.MarkerType"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.common.OrderedTerm"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.common.OrderedTermBase"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.common.OrderedTermVocabulary"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.common.OriginalSourceBase"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.common.RelationshipTermBase"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.common.Representation"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.common.TermVocabulary"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.common.User"/>\r
+ <!-- Description Package -->\r
+ <mapping class="eu.etaxonomy.cdm.model.description.CategoricalData"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.description.CommonTaxonName"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.description.DescriptionBase"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.description.DescriptionElementBase"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.description.DescriptionElementSource"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.description.Distribution"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.description.Feature"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.description.FeatureNode"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.description.FeatureTree"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.description.KeyStatement"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.description.MediaKey"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.description.IndividualsAssociation"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.description.MeasurementUnit"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.description.MultiAccessKey"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.description.PolytomousKey"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.description.PolytomousKeyNode"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.description.PresenceAbsenceTerm"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.description.QuantitativeData"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.description.SpecimenDescription"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.description.State"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.description.StateData"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.description.StatisticalMeasure"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.description.StatisticalMeasurementValue"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.description.TaxonDescription"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.description.TaxonInteraction"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.description.TaxonNameDescription"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.description.TextData"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.description.TextFormat"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.description.WorkingSet"/>\r
+ <!-- Location Package -->\r
+ <mapping class="eu.etaxonomy.cdm.model.location.NamedArea"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.location.NamedAreaLevel"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.location.NamedAreaType"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.location.ReferenceSystem"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.location.Point"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.location.Country"/>\r
+ <!-- Media Package -->\r
+ <mapping class="eu.etaxonomy.cdm.model.media.AudioFile"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.media.ImageFile"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.media.Media"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.media.MediaRepresentation"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.media.MediaRepresentationPart"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.media.MovieFile"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.media.Rights"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.media.RightsType"/>\r
+ <!-- Meta Data Package -->\r
+ <mapping class="eu.etaxonomy.cdm.model.metadata.CdmMetaData"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.metadata.CdmPreference"/>\r
+ <!-- Molecular Package -->\r
+ <mapping class="eu.etaxonomy.cdm.model.molecular.PhylogeneticTree"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.molecular.DnaQuality"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.molecular.DnaSample"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.molecular.Amplification"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.molecular.AmplificationResult"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.molecular.Primer"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.molecular.Sequence"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.molecular.SequenceString"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.molecular.SingleRead"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.molecular.SingleReadAlignment"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.molecular.Cloning"/>\r
+ <!-- Name Package -->\r
+ <mapping class="eu.etaxonomy.cdm.model.name.BacterialName"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.name.BotanicalName"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.name.CultivarPlantName"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.name.HomotypicalGroup"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.name.HybridRelationship"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.name.HybridRelationshipType"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.name.NameRelationship"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.name.NameRelationshipType"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.name.NameTypeDesignation"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.name.NameTypeDesignationStatus"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.name.NomenclaturalCode"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.name.NomenclaturalStatus"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.name.NomenclaturalStatusType"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.name.NonViralName"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.name.Rank"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.name.SpecimenTypeDesignation"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.name.SpecimenTypeDesignationStatus"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.name.TaxonNameBase"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.name.TypeDesignationBase"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.name.ViralName"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.name.ZoologicalName"/>\r
+ <!-- Occurrence Package -->\r
+ <mapping class="eu.etaxonomy.cdm.model.occurrence.Collection"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.occurrence.DerivationEvent"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.occurrence.DerivationEventType"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.occurrence.DerivedUnit"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.occurrence.MaterialOrMethodEvent"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.occurrence.MediaSpecimen"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.occurrence.DeterminationEvent"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.occurrence.FieldUnit"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.occurrence.GatheringEvent"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.occurrence.PreservationMethod"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.occurrence.SpecimenOrObservationBase"/>\r
+ <!-- Reference Package -->\r
+ <mapping class="eu.etaxonomy.cdm.model.reference.Reference"/>\r
+\r
+ <!-- Taxon Package -->\r
+ <mapping class="eu.etaxonomy.cdm.model.taxon.Synonym"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.taxon.SynonymRelationship"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.taxon.SynonymRelationshipType"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.taxon.Taxon"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.taxon.TaxonBase"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.taxon.TaxonNode"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.taxon.TaxonNodeAgentRelation"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.taxon.Classification"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.taxon.TaxonRelationship"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.taxon.TaxonRelationshipType"/>\r
+ \r
+ <!-- Validation Package -->\r
+ <mapping class="eu.etaxonomy.cdm.model.validation.EntityValidation"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.validation.EntityConstraintViolation"/>\r
+ \r
+ <!-- View Package -->\r
+ <mapping class="eu.etaxonomy.cdm.model.view.AuditEvent"/>\r
+ \r
+ <!-- for filling caches -->\r
+ <!-- since hibernate 4 listeners are not handled via hibernate.cfg.xml anymore -->\r
+ <!-- http://stackoverflow.com/questions/8616146/eventlisteners-using-hibernate-4-0-with-spring-3-1-0-release\r
+ https://community.jboss.org/wiki/HibernateCoreMigrationGuide40 -->\r
+\r
+ </session-factory>\r
+</hibernate-configuration>
\ No newline at end of file
<?xml version="1.0" encoding="UTF-8"?>\r
<beans xmlns="http://www.springframework.org/schema/beans"\r
- xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"\r
- xmlns:context="http://www.springframework.org/schema/context"\r
- xmlns:tx="http://www.springframework.org/schema/tx"\r
- xsi:schemaLocation="http://www.springframework.org/schema/beans http://www.springframework.org/schema/beans/spring-beans-3.2.xsd
- http://www.springframework.org/schema/tx http://www.springframework.org/schema/tx/spring-tx-3.2.xsd
- http://www.springframework.org/schema/context http://www.springframework.org/schema/context/spring-context-3.2.xsd">\r
- \r
- \r
- <!-- <bean id="remoteTermInitializer" class="eu.etaxonomy.cdm.remote.service.RemoteTermInitializer"/>-->\r
- \r
- <context:annotation-config/>\r
+ xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xmlns:context="http://www.springframework.org/schema/context"\r
+ xmlns:tx="http://www.springframework.org/schema/tx"\r
+ xsi:schemaLocation="http://www.springframework.org/schema/beans http://www.springframework.org/schema/beans/spring-beans-3.1.xsd
+ http://www.springframework.org/schema/tx http://www.springframework.org/schema/tx/spring-tx-3.1.xsd
+ http://www.springframework.org/schema/context http://www.springframework.org/schema/context/spring-context-3.1.xsd">\r
+\r
+ <import resource="classpath:/eu/etaxonomy/cdm/httpInvokerServiceClients.xml" />\r
+\r
+ <bean id="cdmEntitySessionManager" \r
+ class="eu.etaxonomy.taxeditor.session.CdmEntitySessionManager" />\r
+\r
+ <bean id="cdmApplicationRemoteConfiguration" \r
+ class="eu.etaxonomy.cdm.api.application.CdmApplicationRemoteConfiguration" />\r
+\r
+ \r
+ <bean id="cdmServiceRequestExecutor" \r
+ class="eu.etaxonomy.taxeditor.service.CdmServiceRequestExecutor" />\r
+ \r
+ <bean id="cachedCommonService" \r
+ class="eu.etaxonomy.taxeditor.service.CachedCommonServiceImpl" />\r
+ \r
+ \r
+ <bean id="defaultExport"\r
+ class="eu.etaxonomy.cdm.io.common.CdmApplicationAwareDefaultExport" />\r
\r
- <import resource="classpath:/eu/etaxonomy/cdm/httpInvokerServiceClients.xml"/>\r
+ <bean id="jaxbExport"\r
+ class="eu.etaxonomy.cdm.io.jaxb.JaxbExport" />\r
\r
- <bean id="cdmApplicationRemoteConfiguration" class="eu.etaxonomy.cdm.api.application.CdmApplicationRemoteConfiguration"/> \r
+ <bean id="accessDecisionManager" \r
+ class="eu.etaxonomy.cdm.persistence.hibernate.permission.UnanimousBasedUnrevokable" >\r
\r
- <import resource="classpath:/eu/etaxonomy/cdm/remoting_services_security.xml"/> \r
- \r
- <bean id="cdmTermCacher" class="eu.etaxonomy.cdm.api.cache.CdmTermCacher"/>\r
- \r
- \r
- <!-- EditGeoService was moved to ext. Therefore it will not be found by the default component scan.
- We added it here because the Editor needs it. However, this is only a temporary solution.
- In the future we want to pass in an application context with the editor. -->\r
-\r
-\r
- <!-- <bean id="conversationHolder" class="eu.etaxonomy.cdm.api.conversation.ConversationHolder" scope="prototype"/> -->\r
-\r
- <!-- TODO move to io -->\r
-<!-- \r
- <context:component-scan base-package="eu/etaxonomy/cdm/io">\r
- <context:exclude-filter type="regex" expression="eu\.etaxonomy\.cdm\.io\.berlinModel.*" />\r
- </context:component-scan>\r
- -->\r
- <!-- enable the configuration of transactional behavior based on annotations -->\r
- <!-- <tx:annotation-driven transaction-manager="transactionManager"/> -->\r
+ <property name="decisionVoters">\r
+ <list>\r
+ <bean\r
+ class="eu.etaxonomy.cdm.persistence.hibernate.permission.voter.GrantAlwaysVoter" />\r
+ <bean\r
+ class="eu.etaxonomy.cdm.persistence.hibernate.permission.voter.TaxonNodeVoter" />\r
+ <bean\r
+ class="eu.etaxonomy.cdm.persistence.hibernate.permission.voter.TaxonBaseVoter" />\r
+ <bean\r
+ class="eu.etaxonomy.cdm.persistence.hibernate.permission.voter.DescriptionBaseVoter" />\r
+ <bean\r
+ class="eu.etaxonomy.cdm.persistence.hibernate.permission.voter.DescriptionElementVoter" />\r
+ </list>\r
+ </property>\r
+ </bean>\r
+\r
+ <!-- CdmPermissionEvaluator.hasPermissions() evaluates the CdmPermissions \r
+ like TAXONNODE.UPDATE{20c8f083-5870-4cbd-bf56-c5b2b98ab6a7} -->\r
+ <bean id="cdmPermissionEvaluator" \r
+ class="eu.etaxonomy.cdm.persistence.hibernate.permission.CdmPermissionEvaluator">\r
+ <property name="accessDecisionManager" ref="accessDecisionManager" />\r
+ </bean>\r
+\r
+ <bean id="authenticationManager"\r
+ class="org.springframework.security.authentication.ProviderManager">\r
+ <property name="providers">\r
+ <list>\r
+ <ref local="daoAuthenticationProvider" />\r
+ </list>\r
+ </property>\r
+ </bean>\r
+\r
+ <bean id="daoAuthenticationProvider" \r
+ class="org.springframework.security.authentication.dao.DaoAuthenticationProvider">\r
+ <property name="userDetailsService" ref="userService" />\r
+ <property name="saltSource" ref="saltSource" />\r
+ <property name="passwordEncoder" ref="passwordEncoder" />\r
+ </bean>\r
+\r
+ <bean id="passwordEncoder" \r
+ class="org.springframework.security.authentication.encoding.Md5PasswordEncoder" />\r
+\r
+ <bean id="saltSource" \r
+ class="org.springframework.security.authentication.dao.ReflectionSaltSource">\r
+ <property name="userPropertyToUse" value="getUsername" />\r
+ </bean>\r
\r
</beans>\r
+++ /dev/null
-<?xml version="1.0" encoding="UTF-8"?>\r
-<beans xmlns="http://www.springframework.org/schema/beans"\r
- xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xmlns:context="http://www.springframework.org/schema/context"\r
- xmlns:tx="http://www.springframework.org/schema/tx" xmlns:aop="http://www.springframework.org/schema/aop"\r
- xsi:schemaLocation="http://www.springframework.org/schema/beans\r
- http://www.springframework.org/schema/beans/spring-beans-3.2.xsd\r
- http://www.springframework.org/schema/context http://www.springframework.org/schema/context/spring-context-3.2.xsd\r
- http://www.springframework.org/schema/tx http://www.springframework.org/schema/tx/spring-tx-3.2.xsd\r
- http://www.springframework.org/schema/aop http://www.springframework.org/schema/aop/spring-aop-3.2.xsd\r
- ">\r
-\r
-\r
- <!--\r
- ============================== SECURITY ==============================\r
- -->\r
- <bean id="accessDecisionManager" class="eu.etaxonomy.cdm.persistence.hibernate.permission.UnanimousBasedUnrevokable">\r
- <property name="decisionVoters">\r
- <list>\r
- <bean class="eu.etaxonomy.cdm.persistence.hibernate.permission.voter.GrantAlwaysVoter" />\r
- <bean class="eu.etaxonomy.cdm.persistence.hibernate.permission.voter.TaxonNodeVoter" />\r
- <bean class="eu.etaxonomy.cdm.persistence.hibernate.permission.voter.TaxonBaseVoter" />\r
- <bean class="eu.etaxonomy.cdm.persistence.hibernate.permission.voter.DescriptionBaseVoter" />\r
- <bean class="eu.etaxonomy.cdm.persistence.hibernate.permission.voter.DescriptionElementVoter" />\r
- </list>\r
- </property>\r
- </bean>\r
-\r
- <!--\r
- CdmPermissionEvaluator.hasPermissions() evaluates the CdmPermissions like TAXONNODE.UPDATE{20c8f083-5870-4cbd-bf56-c5b2b98ab6a7}\r
- -->\r
- <bean id="cdmPermissionEvaluator" class="eu.etaxonomy.cdm.persistence.hibernate.permission.CdmPermissionEvaluator">\r
- <property name="accessDecisionManager" ref="accessDecisionManager" />\r
- </bean>\r
-\r
- <!-- The CdmSecurityHibernateInterceptor checks onSave() and on flushDirty() if the currently authenticated principal or token has\r
- sufficient permissions on the entity to be persisted -->\r
- <bean id="securityHibernateInterceptor" class="eu.etaxonomy.cdm.persistence.hibernate.CdmSecurityHibernateInterceptor">\r
- <property name="permissionEvaluator" ref="cdmPermissionEvaluator" />\r
- </bean>\r
-\r
-</beans>\r
+++ /dev/null
-<?xml version="1.0" encoding="UTF-8"?>\r
-<beans xmlns="http://www.springframework.org/schema/beans"\r
- xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"\r
- xmlns:context="http://www.springframework.org/schema/context"\r
- xmlns:security="http://www.springframework.org/schema/security"\r
- xsi:schemaLocation="http://www.springframework.org/schema/beans http://www.springframework.org/schema/beans/spring-beans-3.2.xsd\r
- http://www.springframework.org/schema/tx http://www.springframework.org/schema/tx/spring-tx-3.2.xsd\r
- http://www.springframework.org/schema/context http://www.springframework.org/schema/context/spring-context-3.2.xsd\r
- http://www.springframework.org/schema/security http://www.springframework.org/schema/security/spring-security-3.1.xsd"\r
- >\r
-\r
- <import resource="classpath:/eu/etaxonomy/cdm/remoting_persistence_security.xml"/>\r
- <!--\r
- ======================================================================\r
- security specific configuration\r
- ======================================================================\r
- -->\r
- <security:global-method-security pre-post-annotations="enabled" run-as-manager-ref="runAsManager" >\r
- <security:expression-handler ref="expressionHandler" />\r
- </security:global-method-security>\r
-\r
- <!--\r
- To use "hasPermission()" in the Spring EL method annotations like @PreAuthorize we explicitly configure the permissionEvaluator\r
- the cdmPermissionEvaluator is already defined in the persistence security context\r
- -->\r
- <bean id="expressionHandler" class="org.springframework.security.access.expression.method.DefaultMethodSecurityExpressionHandler">\r
- <property name="permissionEvaluator" ref="cdmPermissionEvaluator" />\r
- </bean>\r
-\r
- <bean id="authenticationManager" class="org.springframework.security.authentication.ProviderManager">\r
- <property name="providers">\r
- <list>\r
- <ref local="daoAuthenticationProvider"/>\r
- </list>\r
- </property>\r
- </bean>\r
-\r
- <bean id="daoAuthenticationProvider" class="org.springframework.security.authentication.dao.DaoAuthenticationProvider">\r
- <property name="userDetailsService" ref="userService"/>\r
- <property name="saltSource" ref="saltSource"/>\r
- <property name="passwordEncoder" ref="passwordEncoder"/>\r
- </bean>\r
-\r
- <bean id="passwordEncoder" class="org.springframework.security.authentication.encoding.Md5PasswordEncoder"/>\r
-\r
- <bean id="saltSource" class="org.springframework.security.authentication.dao.ReflectionSaltSource">\r
- <property name="userPropertyToUse" value="getUsername"/>\r
- </bean>\r
-\r
- <!--\r
- Run-As Authentication Replacement for system operations\r
- as e.g. performed by the eu.etaxonomy.cdm.api.application.FirstDataInserter\r
-\r
- the key must match FirstDataInserter.RUN_AS_KEY\r
- -->\r
- <bean id="runAsManager"\r
- class="org.springframework.security.access.intercept.RunAsManagerImpl">\r
- <property name="key" value="TtlCx3pgKC4l"/>\r
- </bean>\r
-\r
-\r
-</beans>\r
--- /dev/null
+<?xml version="1.0" encoding="UTF-8"?>
+<!DOCTYPE log4j:configuration SYSTEM "log4j.dtd">
+<log4j:configuration xmlns:log4j="http://jakarta.apache.org/log4j/"
+ debug="false">
+ <appender name="CONSOLE" class="org.apache.log4j.ConsoleAppender">
+ <param name="Target" value="System.out" />
+ <layout class="org.apache.log4j.PatternLayout">
+ <param name="ConversionPattern" value="%d %p [%c] - %m%n" />
+ </layout>
+ <filter class="org.apache.log4j.filter.ExpressionFilter">
+ <param name="expression"
+ value="msg like '.*has a maxElementsInMemory of 0. This might lead to performance degradation or OutOfMemoryError at Terracotta client.*'" />
+ <param name="acceptOnMatch" value="false" />
+ </filter>
+ <filter class="org.apache.log4j.filter.ExpressionFilter">
+ <param name="expression"
+ value="msg like '.*object references was reached while attempting to calculate the size of the object graph.*'" />
+ <param name="acceptOnMatch" value="false" />
+ </filter>
+ </appender>
+ <root>
+ <priority value="WARN" />
+ <appender-ref ref="CONSOLE" />
+ </root>
+<!-- <logger name="org.hibernate.proxy.AbstractLazyInitializer"> -->
+<!-- <level value="info" /> -->
+<!-- </logger> -->
+<!-- <logger -->
+<!-- name="org.hibernate.collection.internal.AbstractPersistentCollection"> -->
+<!-- <level value="info" /> -->
+<!-- </logger> -->
+<!-- <logger -->
+<!-- name="eu.etaxonomy.taxeditor.service.CdmServiceRequestExecutor"> -->
+<!-- <level value="info" /> -->
+<!-- </logger> -->
+</log4j:configuration>
\ No newline at end of file
+++ /dev/null
-<?xml version="1.0" encoding="UTF-8"?>
-<beans xmlns="http://www.springframework.org/schema/beans"
- xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
- xmlns:context="http://www.springframework.org/schema/context"
- xsi:schemaLocation="http://www.springframework.org/schema/beans
- http://www.springframework.org/schema/beans/spring-beans-2.5.xsd
- http://www.springframework.org/schema/context
- http://www.springframework.org/schema/context/spring-context-2.5.xsd">
-
- <bean id="defaultRemoteSource">
- <property name="server" value="127.0.0.1"/>
- <property name="port" value="8080"/>
- <property name="contextPath" value=""/>
- </bean>
-
- <bean id="incompleteRemoteSource">
- <property name="server" value="127.0.0.1"/>
- <property name="contextPath" value=""/>
- </bean>
-
-</beans>
\ No newline at end of file
Bundle-ManifestVersion: 2
Bundle-Name: Editor Bundle
Bundle-SymbolicName: eu.etaxonomy.taxeditor.editor;singleton:=true
-Bundle-Version: 3.8.1
+Bundle-Version: 3.12.0.qualifier
Bundle-Activator: eu.etaxonomy.taxeditor.editor.internal.TaxeditorEditorPlugin
Bundle-Vendor: %Bundle-Vendor.0
Bundle-Localization: OSGI-INF/l10n/plugin
eu.etaxonomy.taxeditor.editor.key.polytomous,
eu.etaxonomy.taxeditor.editor.name,
eu.etaxonomy.taxeditor.editor.name.handler,
+ eu.etaxonomy.taxeditor.editor.name.operation,
eu.etaxonomy.taxeditor.editor.view.concept,
eu.etaxonomy.taxeditor.editor.view.dataimport,
eu.etaxonomy.taxeditor.editor.view.descriptive,
CreateDerivateContextMenu_ADD=Add...
CreateDerivateContextMenu_DNA_SAMPLE=DNA Sample
CreateDerivateContextMenu_MEDIA=Media...
-CreateDerivateContextMenu_MEDIA_EXISTING=Media Specimen with existing media
-CreateDerivateContextMenu_MEDIA_SPECIMEN=Media Specimen
+CreateDerivateContextMenu_MEDIA_EXISTING=Use existing media item
+CreateDerivateContextMenu_MEDIA_SPECIMEN=Media item
CreateDerivateContextMenu_NO_CHILD_DERIVATE=No child derivatives
CreateDerivateContextMenu_SEQUENCE=Consensus Sequence
CreateDerivateContextMenu_SINGLE_READ=Single Read
OpenDerivateEditorForTaxonHandler_FAILED_TO_OPEN=Failed to open Editor
OpenDerivateEditorForTaxonHandler_HIERARCHY_CORRUPTED=The derivative hierarchy is corrupted\!
OpenDerivateEditorForTaxonHandler_NO_DERIVATIVES_FOUND=No Derivatives found
+
+DeleteTaxonBaseHandler_CONFIRM_DELETION=Confirm Deletion
+DeleteTaxonBaseHandler_ELEMENT_MUST_BE_SYNONYM_MISAPP_CONCEPT=Element has to be Synonym, Misapplication or Concept
+DeleteTaxonBaseHandler_REALLY_DELETE_TAXON=Are you sure you want to delete the selected taxon?
CreateDerivateContextMenu_ADD=Hinzufügen...
-CreateDerivateContextMenu_DNA_SAMPLE=DNA Sample
+CreateDerivateContextMenu_DNA_SAMPLE=DNA Probe
CreateDerivateContextMenu_MEDIA=Media...
-CreateDerivateContextMenu_MEDIA_EXISTING=Media Specimen mit vorhandender Mediadatei
-CreateDerivateContextMenu_MEDIA_SPECIMEN=Media Specimen
+CreateDerivateContextMenu_MEDIA_EXISTING=Vorhandendes Medienobjekt verwenden
+CreateDerivateContextMenu_MEDIA_SPECIMEN=Medienobjekt
CreateDerivateContextMenu_NO_CHILD_DERIVATE=Keine Kind-Derivate
CreateDerivateContextMenu_SEQUENCE=Konsensussequenz
CreateDerivateContextMenu_SINGLE_READ=Single Read
OpenDerivateEditorForTaxonHandler_FAILED_TO_OPEN=Öffnen des Editors fehlgeschlagen
OpenDerivateEditorForTaxonHandler_HIERARCHY_CORRUPTED=Die Derivathierarchie ist korrumpiert\!
OpenDerivateEditorForTaxonHandler_NO_DERIVATIVES_FOUND=Keine Derivate gefunden
+
+DeleteTaxonBaseHandler_CONFIRM_DELETION=Löschen bestätigen
+DeleteTaxonBaseHandler_ELEMENT_MUST_BE_SYNONYM_MISAPP_CONCEPT=Element muss Synonym, Misapplication oder Konzept sein
+DeleteTaxonBaseHandler_REALLY_DELETE_TAXON=Wollen Sie wirklich das ausgewählte Taxon löschen?
commandId="eu.etaxonomy.taxeditor.editor.command.new.name"
label="%command.label.46"
style="push">
+ <visibleWhen
+ checkEnabled="true">
+ <reference
+ definitionId="isCdmStoreConnected">
+ </reference>
+ </visibleWhen>
</command>
<command
commandId="eu.etaxonomy.taxeditor.editor.command.new.reference"
label="%command.label.47"
style="push">
+ <visibleWhen
+ checkEnabled="true">
+ <reference
+ definitionId="isCdmStoreConnected">
+ </reference>
+ </visibleWhen>
</command>
<command
commandId="eu.etaxonomy.taxeditor.editor.command.new.team"
label="%command.label.1"
style="push">
+ <visibleWhen
+ checkEnabled="true">
+ <reference
+ definitionId="isCdmStoreConnected">
+ </reference>
+ </visibleWhen>
</command>
<command
commandId="eu.etaxonomy.taxeditor.editor.command.new.person"
label="%command.label.2"
style="push">
+ <visibleWhen
+ checkEnabled="true">
+ <reference
+ definitionId="isCdmStoreConnected">
+ </reference>
+ </visibleWhen>
</command>
<separator
name="eu.etaxonomy.navigation.menu.new.separator2"
commandId="eu.etaxonomy.taxeditor.editor.command.new.specimen"
label="%command.label.3"
style="push">
+ <visibleWhen
+ checkEnabled="true">
+ <reference
+ definitionId="isCdmStoreConnected">
+ </reference>
+ </visibleWhen>
</command>
<separator
name="eu.etaxonomy.navigation.menu.new.separator3"
name="org.eclipse.ui.views.showView.viewId"
value="eu.etaxonomy.taxeditor.editor.view.descriptive">
</parameter>
+ <visibleWhen
+ checkEnabled="true">
+ <reference
+ definitionId="isCdmStoreConnected">
+ </reference>
+ </visibleWhen>
</command>
<command
commandId="org.eclipse.ui.views.showView"
name="org.eclipse.ui.views.showView.viewId"
value="eu.etaxonomy.taxeditor.editor.view.media">
</parameter>
+ <visibleWhen
+ checkEnabled="true">
+ <reference
+ definitionId="isCdmStoreConnected">
+ </reference>
+ </visibleWhen>
</command>
<command
commandId="org.eclipse.ui.views.showView"
name="org.eclipse.ui.views.showView.viewId"
value="eu.etaxonomy.taxeditor.editor.view.concept">
</parameter>
+ <visibleWhen
+ checkEnabled="true">
+ <reference
+ definitionId="isCdmStoreConnected">
+ </reference>
+ </visibleWhen>
</command>
<command
commandId="org.eclipse.ui.views.showView"
value="eu.etaxonomy.taxeditor.editor.view.concept.graph">
</parameter>
<visibleWhen
- checkEnabled="false">
- <reference
- definitionId="isShowExperimentalFeatures">
- </reference>
+ checkEnabled="true">
+ <and>
+ <reference
+ definitionId="isShowExperimentalFeatures">
+ </reference>
+ <reference
+ definitionId="isCdmStoreConnected">
+ </reference>
+ </and>
</visibleWhen>
</command>
</menuContribution>
name="org.eclipse.ui.views.showView.viewId"
value="eu.etaxonomy.taxeditor.editor.view.validation.problems">
</parameter>
+ <visibleWhen
+ checkEnabled="true">
+ <reference
+ definitionId="isCdmStoreConnected">
+ </reference>
+ </visibleWhen>
</command>
</menuContribution>
</extension>
class="eu.etaxonomy.taxeditor.editor.view.descriptive.handler.ToggleShowOnlyIndividualAssociationsHandler"
commandId="eu.etaxonomy.taxeditor.editor.handler.showOnlyIndividualAssociations">
</handler>
+ <handler
+ class="eu.etaxonomy.taxeditor.editor.key.polytomous.handler.RemotingCreateChildPolytomousKeyNodeHandler"
+ commandId="eu.etaxonomy.taxeditor.key.polytomous.command.new.child">
+ <activeWhen>
+ <reference
+ definitionId="isRemoting">
+ </reference>
+ </activeWhen>
+ </handler>
+ <handler
+ class="eu.etaxonomy.taxeditor.editor.key.polytomous.handler.RemotingCreateSiblingPolytomousKeyNodeHandler"
+ commandId="eu.etaxonomy.taxeditor.key.polytomous.command.new.sibling">
+ <activeWhen>
+ <reference
+ definitionId="isRemoting">
+ </reference>
+ </activeWhen>
+ </handler>
</extension>
<extension
name="%extension.name"
id="eu.etaxonomy.taxeditor.editor.view.descriptive.command.moveDescriptionElements"
name="%command.name.12">
</command>
+ <command
+ defaultHandler="eu.etaxonomy.taxeditor.editor.handler.OpenDerivateViewHandler"
+ id="eu.etaxonomy.taxeditor.editor.openSpecimenEditor"
+ name="Open Specimen Editor">
+ <commandParameter
+ id="eu.etaxonomy.taxeditor.specimenUuidParameter"
+ name="Specimen UUID parameter"
+ optional="true"
+ typeId="eu.etaxonomy.taxeditor.specimenUuidParameterType">
+ </commandParameter>
+ </command>
</extension>
+ <extension
+ point="org.eclipse.ui.commands">
+ <commandParameterType
+ converter="eu.etaxonomy.taxeditor.handler.UuidParameterConverter"
+ id="eu.etaxonomy.taxeditor.specimenUuidParameterType"
+ type="java.util.UUID">
+ </commandParameterType>
+ </extension>
<extension
point="org.eclipse.core.expressions.definitions">
<definition
</test>
</with>
</definition>
+ <definition
+ id="isRemoting">
+ <test
+ property="eu.etaxonomy.taxeditor.preference.CdmStorePropertyTester.isRemoting">
+ </test>
+ </definition>
<definition
id="isSequence">
<with
</description>
</wizard>
</extension>
- <extension
+ <extension
point="eu.etaxonomy.taxeditor.store.cdmViewer">
<cdmViewer
class="eu.etaxonomy.taxeditor.editor.EditorCdmViewer">
-<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/maven-v4_0_0.xsd">
+<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
+ xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/maven-v4_0_0.xsd">
<parent>
<groupId>eu.etaxonomy</groupId>
<artifactId>taxeditor-parent</artifactId>
- <version>3.8.1</version>
+ <version>3.12.0-SNAPSHOT</version>
</parent>
<modelVersion>4.0.0</modelVersion>
<packaging>eclipse-plugin</packaging>
<name>Editor Bundle</name>
- <description />
+ <description></description>
<url>http://dev.e-taxonomy.eu/trac/wiki/TaxonomicEditorEditorBundle</url>
</project>
import org.eclipse.ui.IEditorInput;
import org.eclipse.ui.IEditorPart;
import org.eclipse.ui.IEditorReference;
+import org.eclipse.ui.IWorkbenchPage;
import org.eclipse.ui.PartInitException;
import org.eclipse.ui.handlers.HandlerUtil;
import eu.etaxonomy.cdm.api.service.ITaxonService;
+import eu.etaxonomy.cdm.model.common.ITreeNode;
import eu.etaxonomy.cdm.model.occurrence.DerivedUnit;
import eu.etaxonomy.cdm.model.occurrence.FieldUnit;
import eu.etaxonomy.cdm.model.occurrence.SpecimenOrObservationBase;
import eu.etaxonomy.cdm.model.taxon.TaxonBase;
+import eu.etaxonomy.cdm.model.taxon.TaxonNode;
import eu.etaxonomy.taxeditor.editor.group.authority.CdmAuthorityEditor;
import eu.etaxonomy.taxeditor.editor.group.authority.CdmAuthorityEditorInput;
import eu.etaxonomy.taxeditor.editor.internal.TaxeditorEditorPlugin;
open(input);
}
+// public static void openPolytomousKeyEditor(UUID polytomousKeyUuid, String name)
+// throws Exception {
+// PolytomousKeyEditorInput input = new PolytomousKeyEditorInput(polytomousKeyUuid, name);
+// open(input);
+// }
+
public static void openCdmAuthorities(UUID groupUuid)
throws Exception {
CdmAuthorityEditorInput input = CdmAuthorityEditorInput.NewInstance(groupUuid);
}
}
- /**
- * Iterates recursively over all originals having the given specimen as a derivate.
- * If a {@link FieldUnit} is found it is returned
- * @param specimen the start element for which the originals are iterated recursively
- * @return the FieldUnit if found, <code>null</code> otherwise
- */
- public static FieldUnit getFieldUnit(SpecimenOrObservationBase<?> specimen){
- SpecimenOrObservationBase<?> topMostDerivate = getTopMostDerivate(specimen);
- if(topMostDerivate instanceof FieldUnit) {
- return (FieldUnit) topMostDerivate;
- }
- return null;
- }
-
/**
* If the current selection is a single {@link TreeNode} it will be returned.
* @param selection the selection to check
openTaxonBase(((TaxonBase<?>) object).getUuid());
}
}
+
+ public static boolean closeObsoleteEditor(TaxonNode taxonNode, IWorkbenchPage activePage){
+ boolean result = true;
+ for (IEditorReference ref : activePage.getEditorReferences()) {
+ try {
+ String treeIndex = ((ITreeNode)taxonNode).treeIndex();
+
+
+ IEditorInput input = ref.getEditorInput();
+ if (input instanceof TaxonEditorInput) {
+ TaxonNode node = ((TaxonEditorInput) input).getTaxonNode();
+ //if node is a child of taxonNode then close the editor
+ if( ((ITreeNode) node).treeIndex().startsWith(treeIndex)){
+ //if (taxonNode.equals(node)) {
+ result &= activePage.closeEditor(ref.getEditor(false), true);
+
+ }
+ }
+ } catch (PartInitException e) {
+ continue;
+ }
+ }
+ return result;
+ }
}
public static String DeleteDerivateOperation_CONFIRM;
public static String DeleteDerivateOperation_DELETE_FAILED;
public static String DeleteDerivateOperation_REALLY_DELETE;
+ public static String DeleteTaxonBaseHandler_CONFIRM_DELETION;
+ public static String DeleteTaxonBaseHandler_ELEMENT_MUST_BE_SYNONYM_MISAPP_CONCEPT;
+ public static String DeleteTaxonBaseHandler_REALLY_DELETE_TAXON;
public static String DerivateDropListener_MOVE_TO;
public static String DerivateView_DERIVATIVE_EDITOR;
public static String DerivateView_SAVING_HIERARCHY;
* @version 1.0
*/
public class MultiPageTaxonEditor extends FormEditor implements
- IPartContentHasFactualData, IConversationEnabled, IPostOperationEnabled,
- IDirtyMarkable, IPartContentHasDetails, ISecuredEditor, IPartContentHasMedia {
-
- /** Constant <code>ID="eu.etaxonomy.taxeditor.editor.taxon"{trunked}</code> */
- public static final String ID = "eu.etaxonomy.taxeditor.editor.taxon";
-
- private boolean dirty;
-
- private ConversationHolder conversation;
- private IDataChangeBehavior dataChangeBehavior;
- private IUndoContext undoContext;
-
- private TaxonEditorInput input;
-
- /**
- * <p>
- * Constructor for MultiPageTaxonEditor.
- * </p>
- */
- public MultiPageTaxonEditor() {
- super();
- undoContext = new UndoContext();
- }
-
- /** {@inheritDoc} */
- @Override
- public void dispose() {
- conversation.unregisterForDataStoreChanges(this);
- conversation.close();
- super.dispose();
- }
-
- /** {@inheritDoc} */
- @Override
- protected void addPages() {
- input = (TaxonEditorInput) getEditorInput();
- conversation = input.getConversationHolder();
- conversation.registerForDataStoreChanges(this);
-
- try {
- addPage(Page.NAME.getIndex(), new TaxonNameEditor(this),
- getEditorInput());
- // setPageText(Page.NAME.getIndex(), Page.NAME.getTitle());
-
- // TODO lazy create
- // addPage(Page.DESCRIPTIVE.getIndex(), new
- // TaxonDescriptionTreeEditor(this), getEditorInput());
- // setPageText(Page.DESCRIPTIVE.getIndex(),
- // Page.DESCRIPTIVE.getTitle());
-
- // EditorUtil.showPropertySheet();
-
- } catch (PartInitException e) {
- MessagingUtils.error(getClass(), e);
- }
- }
-
- /** {@inheritDoc} */
- @Override
- public void doSave(IProgressMonitor monitor) {
- monitor.beginTask("Saving Editor", 4);
- try {
- if (!conversation.isBound()) {
- conversation.bind();
- }
- monitor.worked(1);
+IPartContentHasFactualData, IConversationEnabled, IPostOperationEnabled,
+IDirtyMarkable, IPartContentHasDetails, ISecuredEditor, IPartContentHasMedia {
+
+ /** Constant <code>ID="eu.etaxonomy.taxeditor.editor.taxon"{trunked}</code> */
+ public static final String ID = "eu.etaxonomy.taxeditor.editor.taxon";
+
+ private boolean dirty;
+
+ private ConversationHolder conversation;
+ private IDataChangeBehavior dataChangeBehavior;
+ private IUndoContext undoContext;
+
+ private TaxonEditorInput input;
+
+ /**
+ * <p>
+ * Constructor for MultiPageTaxonEditor.
+ * </p>
+ */
+ public MultiPageTaxonEditor() {
+ super();
+ undoContext = new UndoContext();
+
+ }
+
+ /** {@inheritDoc} */
+ @Override
+ public void dispose() {
+ input.dispose();
+ conversation.unregisterForDataStoreChanges(this);
+ conversation.close();
+ super.dispose();
+ }
+
+ /*
+ * (non-Javadoc)
+ *
+ * @see org.eclipse.ui.forms.editor.FormEditor#addPages()
+ */
+ /** {@inheritDoc} */
+ @Override
+ protected void addPages() {
+ input = (TaxonEditorInput) getEditorInput();
+ conversation = input.getConversationHolder();
+ conversation.registerForDataStoreChanges(this);
+
+ try {
+ addPage(Page.NAME.getIndex(), new TaxonNameEditor(this),
+ getEditorInput());
+ // setPageText(Page.NAME.getIndex(), Page.NAME.getTitle());
+
+ // TODO lazy create
+ // addPage(Page.DESCRIPTIVE.getIndex(), new
+ // TaxonDescriptionTreeEditor(this), getEditorInput());
+ // setPageText(Page.DESCRIPTIVE.getIndex(),
+ // Page.DESCRIPTIVE.getTitle());
+
+ // EditorUtil.showPropertySheet();
+
+ } catch (PartInitException e) {
+ MessagingUtils.error(getClass(), e);
+ }
+ }
+
+ /** {@inheritDoc} */
+ @Override
+ public void doSave(IProgressMonitor monitor) {
+ monitor.beginTask("Saving Editor", 4);
+ try {
+ if (!conversation.isBound()) {
+ conversation.bind();
+ }
+ monitor.worked(1);
for (IEditorPart editorPage : getPages()) {
if (editorPage instanceof TaxonNameEditor) {
monitor.worked(1);
}
- // commit the conversation and start a new transaction immediately
- conversation.commit(true);
- monitor.worked(1);
+ // commit the conversation and start a new transaction immediately
+
+ input.merge();
+ conversation.commit(true);
+ monitor.worked(1);
this.setDirty(false);
monitor.worked(1);
} finally {
monitor.done();
}
- }
-
- private void disableEditor(boolean isOnError) {
- for (IMultiPageTaxonEditorPage editorPage : getPages()) {
- if(isOnError){
- editorPage.setOnError();
- }else {
- editorPage.setDisabled();
- }
- }
- conversation.unregisterForDataStoreChanges(this);
- conversation.close();
- setDirty(false);
- }
-
- private void setDirty(boolean dirty) {
- this.dirty = dirty;
- firePropertyChange(PROP_DIRTY);
- }
-
- @Override
+ }
+
+ private void disableEditor(boolean isOnError) {
+ for (IMultiPageTaxonEditorPage editorPage : getPages()) {
+ if(isOnError){
+ editorPage.setOnError();
+ }else {
+ editorPage.setDisabled();
+ }
+ }
+
+ conversation.unregisterForDataStoreChanges(this);
+ conversation.close();
+ setDirty(false);
+ }
+
+ private void setDirty(boolean dirty) {
+ this.dirty = dirty;
+ firePropertyChange(PROP_DIRTY);
+ }
+
+ /*
+ * (non-Javadoc)
+ *
+ * @see org.eclipse.ui.part.MultiPageEditorPart#isDirty()
+ */
+ /**
+ * <p>
+ * isDirty
+ * </p>
+ *
+ * @return a boolean.
+ */
+ @Override
public boolean isDirty() {
- return dirty;
- }
-
- /** {@inheritDoc} */
- @Override
- public void editorDirtyStateChanged() {
- dirty = true;
- super.editorDirtyStateChanged();
- }
-
- /**
- * {@inheritDoc}
- *
- * Checks whether nested editors are calling
- * <code>firePropertyChange(PROP_DIRTY)</code> to signal an edit has taken
- * place before passing property change along to
- * <code>super.handlePropertyChange(int propertyId)</code>.
- */
- @Override
+ return dirty;
+ }
+
+ /*
+ * (non-Javadoc)
+ *
+ * @see org.eclipse.ui.forms.editor.FormEditor#editorDirtyStateChanged()
+ */
+ /** {@inheritDoc} */
+ @Override
+ public void editorDirtyStateChanged() {
+ dirty = true;
+ super.editorDirtyStateChanged();
+ }
+
+ /**
+ * {@inheritDoc}
+ *
+ * Checks whether nested editors are calling
+ * <code>firePropertyChange(PROP_DIRTY)</code> to signal an edit has taken
+ * place before passing property change along to
+ * <code>super.handlePropertyChange(int propertyId)</code>.
+ */
+ /*
+ * (non-Javadoc)
+ *
+ * @see org.eclipse.ui.part.MultiPageEditorPart#handlePropertyChange(int)
+ */
+ @Override
protected void handlePropertyChange(int propertyId) {
- if (propertyId == PROP_DIRTY) {
- setDirty(true);
- }
- super.handlePropertyChange(propertyId);
- }
-
- /** {@inheritDoc} */
- @Override
- public void doSaveAs() {
- }
-
- /** {@inheritDoc} */
- @Override
- public boolean isSaveAsAllowed() {
- return false;
- }
-
- /** {@inheritDoc} */
- @Override
- public void init(IEditorSite site, IEditorInput input)
- throws PartInitException {
-
- if (!(input instanceof TaxonEditorInput)) {
+ if (propertyId == PROP_DIRTY) {
+ setDirty(true);
+ }
+ super.handlePropertyChange(propertyId);
+ }
+
+ /** {@inheritDoc} */
+ @Override
+ public void doSaveAs() {
+ }
+
+ /** {@inheritDoc} */
+ @Override
+ public boolean isSaveAsAllowed() {
+ return false;
+ }
+
+ /** {@inheritDoc} */
+ @Override
+ public void init(IEditorSite site, IEditorInput input)
+ throws PartInitException {
+
+ if (!(input instanceof TaxonEditorInput)) {
throw new PartInitException(
- "Invalid Input: Must be TaxonEditorInput");
+ "Invalid Input: Must be TaxonEditorInput");
+ }
+
+ this.input = (TaxonEditorInput) input;
+
+
+ // try {
+ // // Listen for name changes,
+ // // change tab for this taxon editor accordingly
+ // getTaxon().addPropertyChangeListener("name",
+ // new PropertyChangeListener() {
+ // public void propertyChange(PropertyChangeEvent e) {
+ // setPartName();
+ // }
+ // });
+ // } catch (NullPointerException e) {
+ // EditorUtil.warn(getClass(),
+ // "Caught an NPE while initing an editor. This is most " +
+ // "likely due to the unsuccesful attempt to restore the former " +
+ // "state of the application. We ignore this because the workbench " +
+ // "will simply be reset.");
+ // }
+ setPartName();
+
+ super.init(site, input);
+ }
+
+ /**
+ * Calls <code>MultiPageEditorPart.setPartName(String partName)</code> with
+ * text appropriate to the state of the taxon: any taxon that has been saved
+ * will by necessity have a name to display; a new taxon should display
+ * "New taxon" in the editor tab.
+ */
+ protected void setPartName() {
+
+ String partName = null;
+ TaxonNameBase<?, ?> name = getTaxon().getName();
+
+ if (name != null) {
+ partName = name.getTitleCache();
+ }
+
+ if (partName == null || partName.equals("")) {
+ partName = ("New taxon");
}
- this.input = (TaxonEditorInput) input;
-
- // try {
- // // Listen for name changes,
- // // change tab for this taxon editor accordingly
- // getTaxon().addPropertyChangeListener("name",
- // new PropertyChangeListener() {
- // public void propertyChange(PropertyChangeEvent e) {
- // setPartName();
- // }
- // });
- // } catch (NullPointerException e) {
- // EditorUtil.warn(getClass(),
- // "Caught an NPE while initing an editor. This is most " +
- // "likely due to the unsuccesful attempt to restore the former " +
- // "state of the application. We ignore this because the workbench " +
- // "will simply be reset.");
- // }
- setPartName();
-
- super.init(site, input);
- }
-
- /**
- * Calls <code>MultiPageEditorPart.setPartName(String partName)</code> with
- * text appropriate to the state of the taxon: any taxon that has been saved
- * will by necessity have a name to display; a new taxon should display
- * "New taxon" in the editor tab.
- */
- protected void setPartName() {
-
- String partName = null;
- TaxonNameBase<?, ?> name = getTaxon().getName();
-
- if (name != null) {
- partName = name.getTitleCache();
- }
-
- if (partName == null || partName.equals("")) {
- partName = ("New taxon");
- }
-
- setPartName(partName);
- }
+ setPartName(partName);
+ }
/**
* {@inheritDoc}
setPartName();
}
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.model.IDirtyMarkableSelectionProvider#forceDirty()
+ */
@Override
public void forceDirty() {
changed(null);
}
- /**
- * The accepted taxon that is the input for this editor
- *
- * @return the accepted taxon
- */
- public Taxon getTaxon() {
- return input.getTaxon();
- }
+ /**
+ * The accepted taxon that is the input for this editor
+ *
+ * @return the accepted taxon
+ */
+ public Taxon getTaxon() {
+ return input.getTaxon();
+ }
- @Override
+ /*
+ * (non-Javadoc)
+ *
+ * @see
+ * eu.etaxonomy.cdm.api.conversation.IConversationEnabled#getConversationHolder
+ * ()
+ */
+ /**
+ * <p>
+ * getConversationHolder
+ * </p>
+ *
+ * @return a {@link eu.etaxonomy.cdm.api.conversation.ConversationHolder}
+ * object.
+ */
+ @Override
public ConversationHolder getConversationHolder() {
- return conversation;
- }
-
- public void setConversationHolder(ConversationHolder conversation) {
- this.conversation = conversation;
- }
-
- public IUndoContext getUndoContext() {
- return undoContext;
- }
-
- public void setUndoContext(IUndoContext undoContext) {
- this.undoContext = undoContext;
- }
-
- /** {@inheritDoc} */
- @Override
- public void setFocus() {
- // logger.warn("Setting focus to editor");
- // bind the conversation
- getConversationHolder().bind();
- // pass focus to the active editor page
- getActiveEditor().setFocus();
- }
-
- /** {@inheritDoc} */
+ return conversation;
+ }
+
+ /**
+ * <p>
+ * setConversationHolder
+ * </p>
+ *
+ * @param conversation
+ * a {@link eu.etaxonomy.cdm.api.conversation.ConversationHolder}
+ * object.
+ */
+ public void setConversationHolder(ConversationHolder conversation) {
+ this.conversation = conversation;
+ }
+
+ /**
+ * <p>
+ * Getter for the field <code>undoContext</code>.
+ * </p>
+ *
+ * @return a {@link org.eclipse.core.commands.operations.IUndoContext}
+ * object.
+ */
+ public IUndoContext getUndoContext() {
+ return undoContext;
+ }
+
+ /**
+ * <p>
+ * Setter for the field <code>undoContext</code>.
+ * </p>
+ *
+ * @param undoContext
+ * a {@link org.eclipse.core.commands.operations.IUndoContext}
+ * object.
+ */
+ public void setUndoContext(IUndoContext undoContext) {
+ this.undoContext = undoContext;
+ }
+
+ /** {@inheritDoc} */
+ @Override
+ public void setFocus() {
+ // logger.warn("Setting focus to editor");
+ // bind the conversation
+ getConversationHolder().bind();
+ input.bind();
+ // pass focus to the active editor page
+ getActiveEditor().setFocus();
+ }
+
+ /*
+ * (non-Javadoc)
+ *
+ * @see
+ * eu.etaxonomy.cdm.persistence.hibernate.ICdmPostCrudObserver#update(eu
+ * .etaxonomy.cdm.persistence.hibernate.CdmCrudEvent)
+ */
+ /** {@inheritDoc} */
@Override
public void update(CdmDataChangeMap events) {
if (dataChangeBehavior == null) {
DataChangeBridge.handleDataChange(events, dataChangeBehavior);
}
+ /*
+ * (non-Javadoc)
+ *
+ * @see
+ * eu.etaxonomy.taxeditor.store.operations.IPostOperationEnabled#postOperation
+ * ()
+ */
/** {@inheritDoc} */
@Override
public boolean postOperation(CdmBase objectAffectedByOperation) {
return false;
}
- /**
- * Returns an <code>IEditorPart</code> implementation by type
- *
- * @param page
- * the page type
- * @return a {@link eu.etaxonomy.taxeditor.editor.IMultiPageTaxonEditorPage}
- * object.
- */
- public IMultiPageTaxonEditorPage getPage(Page page) {
- for (IEditorPart editor : this.getPages()) {
- if (editor.getClass().equals(page.getClazz())) {
- return (IMultiPageTaxonEditorPage) editor;
- }
- }
- return null;
- }
-
- /**
- * Return a list of <code>AbstractTaxonEditor</code>s registered with this
- * <code>MultiPageTaxonEditor</code>.
- *
- * @return a {@link java.util.List} object.
- */
- public List<IMultiPageTaxonEditorPage> getPages() {
- ArrayList<IMultiPageTaxonEditorPage> editors = new ArrayList<IMultiPageTaxonEditorPage>();
- for (int i = 0; i < this.getPageCount(); i++) {
-
- editors.add((IMultiPageTaxonEditorPage) this.getEditor(i));
- }
- return editors;
- }
-
- /**
- * Refreshes a certain page of the MultipageTaxonEditor
- *
- * @param page
- * a {@link eu.etaxonomy.taxeditor.editor.Page} object.
- * @return a boolean.
- */
- public boolean redraw(Page page) {
- return redraw(page, true);
- }
-
- /**
- * Refreshes a certain page of the MultipageTaxonEditor and sets focus to
- * that page
- *
- * @param page
- * a {@link eu.etaxonomy.taxeditor.editor.Page} object.
- * @param focus
- * a boolean.
- * @return a boolean.
- */
- public boolean redraw(Page page, boolean focus) {
- IMultiPageTaxonEditorPage editorPage = getPage(page);
- return editorPage != null && editorPage.redraw(focus);
- }
-
- @Override
+ /**
+ * Returns an <code>IEditorPart</code> implementation by type
+ *
+ * @param page
+ * the page type
+ * @return a {@link eu.etaxonomy.taxeditor.editor.IMultiPageTaxonEditorPage}
+ * object.
+ */
+ public IMultiPageTaxonEditorPage getPage(Page page) {
+ for (IEditorPart editor : this.getPages()) {
+ if (editor.getClass().equals(page.getClazz())) {
+ return (IMultiPageTaxonEditorPage) editor;
+ }
+ }
+ return null;
+ }
+
+ /**
+ * Return a list of <code>AbstractTaxonEditor</code>s registered with this
+ * <code>MultiPageTaxonEditor</code>.
+ *
+ * @return a {@link java.util.List} object.
+ */
+ public List<IMultiPageTaxonEditorPage> getPages() {
+ ArrayList<IMultiPageTaxonEditorPage> editors = new ArrayList<IMultiPageTaxonEditorPage>();
+ for (int i = 0; i < this.getPageCount(); i++) {
+
+ editors.add((IMultiPageTaxonEditorPage) this.getEditor(i));
+ }
+ return editors;
+ }
+
+ /**
+ * Refreshes a certain page of the MultipageTaxonEditor
+ *
+ * @param page
+ * a {@link eu.etaxonomy.taxeditor.editor.Page} object.
+ * @return a boolean.
+ */
+ public boolean redraw(Page page) {
+ return redraw(page, true);
+ }
+
+ /**
+ * Refreshes a certain page of the MultipageTaxonEditor and sets focus to
+ * that page
+ *
+ * @param page
+ * a {@link eu.etaxonomy.taxeditor.editor.Page} object.
+ * @param focus
+ * a boolean.
+ * @return a boolean.
+ */
+ public boolean redraw(Page page, boolean focus) {
+ IMultiPageTaxonEditorPage editorPage = getPage(page);
+ return editorPage != null && editorPage.redraw(focus);
+ }
+
+ /**
+ * <p>
+ * onComplete
+ * </p>
+ *
+ * @return a boolean.
+ */
+ @Override
public boolean onComplete() {
- return false;
- }
+ return false;
+ }
/**
* Reloads the data for this
}
}
- @Override
- public String toString() {
- return String.format("%s[%s]", this.getClass().getSimpleName(), getEditorInput());
- }
-
- @Override
- public boolean permissionsSatisfied() {
- IEditorPart activeEditor = getActiveEditor();
- if(activeEditor != null && ISecuredEditor.class.isAssignableFrom(activeEditor.getClass())){
- return ((ISecuredEditor)activeEditor).permissionsSatisfied();
- }
- return true;
- }
-
- @Override
- public boolean canAttachMedia() {
- return true;
- }
+ @Override
+ public String toString() {
+ return String.format("%s[%s]", this.getClass().getSimpleName(), getEditorInput());
+ }
+
+ @Override
+ public boolean permissionsSatisfied() {
+ IEditorPart activeEditor = getActiveEditor();
+ if(activeEditor != null && ISecuredEditor.class.isAssignableFrom(activeEditor.getClass())){
+ return ((ISecuredEditor)activeEditor).permissionsSatisfied();
+ }
+ return true;
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.model.IPartContentHasMedia#canAttachMedia()
+ */
+ @Override
+ public boolean canAttachMedia() {
+ return true;
+ }
+
}
/**
-* Copyright (C) 2007 EDIT
-* European Distributed Institute of Taxonomy
-* http://www.e-taxonomy.eu
-*
-* The contents of this file are subject to the Mozilla Public License Version 1.1
-* See LICENSE.TXT at the top of this package for the full license terms.
-*/
+ * Copyright (C) 2007 EDIT
+ * European Distributed Institute of Taxonomy
+ * http://www.e-taxonomy.eu
+ *
+ * The contents of this file are subject to the Mozilla Public License Version 1.1
+ * See LICENSE.TXT at the top of this package for the full license terms.
+ */
package eu.etaxonomy.taxeditor.editor;
+import java.util.ArrayList;
+import java.util.Arrays;
import java.util.HashSet;
+import java.util.List;
+import java.util.Map;
import java.util.Set;
import java.util.UUID;
* @created 19.03.2009
* @version 1.0
*/
-public class TaxonEditorInput implements IEditorInput, IConversationEnabled, IPersistableElement {
+public class TaxonEditorInput extends CdmEntitySessionInput implements IEditorInput, IConversationEnabled, IPersistableElement {
- private final ConversationHolder conversation;
+ private final ConversationHolder conversation;
- private final TaxonNode taxonNode;
+ private TaxonNode taxonNode;
- private TaxonEditorInputDataChangeBehaviour dataChangeBehavior;
+ private TaxonEditorInputDataChangeBehaviour dataChangeBehavior;
- private TaxonBase initiallySelectedTaxonBase;
+ private TaxonBase initiallySelectedTaxonBase;
- private TaxonEditorInput(TaxonNode taxonNode, ConversationHolder conversation){
- this.conversation = conversation;
- this.taxonNode = taxonNode;
- }
+ private enum CdmType {
+ TAXON_NODE,
+ TAXON_BASE,
+ PARENT_TAXON_NODE
+ }
+ private TaxonEditorInput(UUID uuid, CdmType type) {
+ super(true);
+ this.conversation = CdmStore.createConversation();
+ switch(type) {
+ case PARENT_TAXON_NODE:
+ initForParentTaxonNode(uuid);
+ break;
+ case TAXON_BASE:
+ initForTaxonBase(uuid);
+ break;
+ case TAXON_NODE:
+ initForTaxonNode(uuid);
+ break;
+ }
+ }
+ private void init(TaxonNode taxonNode) {
+ this.taxonNode = taxonNode;
+ }
- /**
- * <p>NewInstance</p>
- *
- * @param taxonNodeUuid a {@link java.util.UUID} object.
- * @return a {@link eu.etaxonomy.taxeditor.editor.TaxonEditorInput} object.
- * @throws java.lang.Exception if any.
- */
- public static TaxonEditorInput NewInstance(UUID taxonNodeUuid) throws Exception{
- try{
- ConversationHolder conversation = CdmStore.createConversation();
- return NewInstance(taxonNodeUuid, conversation);
- }catch(Exception e){
- throw e;
- }
- }
/**
+ * <p>NewInstance</p>
*
- * @param taxonNodeUuid
- * @param conversation
- * @return
+ * @param taxonNodeUuid a {@link java.util.UUID} object.
+ * @return a {@link eu.etaxonomy.taxeditor.editor.TaxonEditorInput} object.
+ * @throws java.lang.Exception if any.
*/
- private static TaxonEditorInput NewInstance(UUID taxonNodeUuid, ConversationHolder conversation){
+ private void initForTaxonNode(UUID taxonNodeUuid) {
- TaxonNode taxonNode = CdmStore.getService(ITaxonNodeService.class).load(taxonNodeUuid, null);
+ TaxonNode taxonNode = CdmStore.getService(ITaxonNodeService.class).load(taxonNodeUuid, getTaxonNodePropertyPaths());
- if(taxonNode == null){
- MessagingUtils.warningDialog("Not yet implemented", TaxonEditorInput.class, "Selected element is not of type TaxonNode but [null].");
- return null;
- }
+ if(taxonNode == null){
+ MessagingUtils.warningDialog("Not yet implemented", TaxonEditorInput.class, "Selected element is not type TaxonBase.");
+ }
+ init(taxonNode);
+
+ }
- return new TaxonEditorInput(taxonNode, conversation);
+ private void initForTaxonBase(UUID taxonBaseUuid) {
+ TaxonBase taxonBase = CdmStore.getService(ITaxonService.class).load(taxonBaseUuid, getTaxonBasePropertyPaths());
+ if (taxonBase != null){
+ if(taxonBase.isInstanceOf(Taxon.class)){
+ Taxon taxon = CdmBase.deproxy(taxonBase, Taxon.class);
+
+ if (taxon.getTaxonNodes().size() == 0 && taxon.isMisapplication()){
+ // TODO get accepted taxon
+ MessagingUtils.info("trying to open Mispplied Name ");
+
+ Set<Taxon> acceptedTaxa = new HashSet<Taxon>();
+ Set<TaxonRelationship> relations = taxon.getRelationsFromThisTaxon();
+ for(TaxonRelationship relation : relations){
+ if(relation.getType().equals(TaxonRelationshipType.MISAPPLIED_NAME_FOR())){
+ acceptedTaxa.add(relation.getToTaxon());
+ }
+ }
+ setInputForMultipleTaxa(conversation, acceptedTaxa);
+
+ }else{
+ setInputForMultipleNodes(conversation, taxon.getTaxonNodes());
+ }
+ }else if(taxonBase instanceof Synonym){
+ Synonym synonym = (Synonym) taxonBase;
+
+ Set<Taxon> taxa = synonym.getAcceptedTaxa();
+ setInputForMultipleTaxa(conversation, taxa);
+ }
+ }
}
+
/**
- * <p>NewInstanceFromTaxonBase</p>
+ * <p>NewEmptyInstance</p>
*
- * @param taxonBaseUuid a {@link java.util.UUID} object.
+ * @param parentNodeUuid a {@link java.util.UUID} object.
* @return a {@link eu.etaxonomy.taxeditor.editor.TaxonEditorInput} object.
*/
- public static TaxonEditorInput NewInstanceFromTaxonBase(UUID taxonBaseUuid){
- ConversationHolder conversation = CdmStore.createConversation();
-
- TaxonEditorInput input = null;
-
- TaxonBase taxonBase = CdmStore.getService(ITaxonService.class).find(taxonBaseUuid);
- if (taxonBase != null){
- if(taxonBase.isInstanceOf(Taxon.class)){
- Taxon taxon = CdmBase.deproxy(taxonBase, Taxon.class);
-
- if (taxon.getTaxonNodes().size() == 0 && taxon.isMisapplication()){
- // TODO get accepted taxon
- MessagingUtils.info("trying to open misapplied Name ");
-
- Set<Taxon> acceptedTaxa = new HashSet<Taxon>();
- Set<TaxonRelationship> relations = taxon.getRelationsFromThisTaxon();
- for(TaxonRelationship relation : relations){
- if(relation.getType().equals(TaxonRelationshipType.MISAPPLIED_NAME_FOR())){
- acceptedTaxa.add(relation.getToTaxon());
- }
- }
- input = getInputForMultipleTaxa(conversation, acceptedTaxa);
-
- }else{
- input = getInputForMultipleNodes(conversation, taxon.getTaxonNodes());
- }
- }else if(taxonBase instanceof Synonym){
- Synonym synonym = (Synonym) taxonBase;
-
- Set<Taxon> taxa = synonym.getAcceptedTaxa();
- input = getInputForMultipleTaxa(conversation, taxa);
- }
- if (input != null){
- input.setInitiallySelectedTaxonBase(taxonBase);
- }
- }
-
-
- return input;
+ private void initForParentTaxonNode(UUID parentNodeUuid){
+
+
+ TaxonNameBase<?, ?> name = PreferencesUtil.getPreferredNomenclaturalCode().getNewTaxonNameInstance(null);
+ ITaxonTreeNode parentNode = CdmStore.getService(IClassificationService.class).getTreeNodeByUuid(parentNodeUuid);
+
+ Taxon newTaxon = Taxon.NewInstance(name, parentNode.getReference());
+ TaxonNode newTaxonNode = parentNode.addChildTaxon(newTaxon, parentNode.getReference(), parentNode.getMicroReference());
+
+ // add the new taxon to the editors persistence context
+ UUID newTaxonNodeUuid = CdmStore.getService(ITaxonNodeService.class).save(newTaxonNode).getUuid();
+
+ initForTaxonNode(newTaxonNodeUuid);
}
- private static TaxonEditorInput getInputForMultipleNodes(ConversationHolder conversation, Set<TaxonNode> taxonNodes){
- if(taxonNodes.size() == 1){
- TaxonNode taxonNode = taxonNodes.iterator().next();
- return NewInstance(taxonNode.getUuid(), conversation);
- }else if(taxonNodes.size() > 1){
- TaxonNode taxonNode = ChooseFromMultipleTaxonNodesDialog.choose(taxonNodes);
- if(taxonNode != null){
- return NewInstance(taxonNode.getUuid(), conversation);
- }
- }else if(taxonNodes.size() == 0){
- // this is an undesired state
- MessagingUtils.warningDialog("Incorrect state", TaxonEditorInput.class, "The accepted taxon is not part of any classification. This should not have happened.");
- }
- return null;
+
+
+
+ private void setInputForMultipleNodes(ConversationHolder conversation, Set<TaxonNode> taxonNodes){
+ if(taxonNodes.size() == 1){
+ TaxonNode taxonNode = taxonNodes.iterator().next();
+ init(taxonNode);
+ }else if(taxonNodes.size() > 1){
+ TaxonNode taxonNode = ChooseFromMultipleTaxonNodesDialog.choose(taxonNodes);
+ if(taxonNode != null){
+ init(taxonNode);
+ }
+ }else if(taxonNodes.size() == 0){
+ // this is an undesired state
+ MessagingUtils.warningDialog("Incorrect state", TaxonEditorInput.class, "The accepted taxon is not part of any classification. This should not have happened.");
+ }
}
- private static TaxonEditorInput getInputForMultipleTaxa(ConversationHolder conversation, Set<Taxon> taxa){
- if(taxa.size() == 1){
- Taxon taxon = taxa.iterator().next();
- Set<TaxonNode> nodes = taxon.getTaxonNodes();
- return getInputForMultipleNodes(conversation, nodes);
- }else if(taxa.size() > 1){
- Set<TaxonNode> taxonNodes = new HashSet<TaxonNode>();
- for ( Taxon taxon : taxa ){
- taxonNodes.addAll(taxon.getTaxonNodes());
- }
- return getInputForMultipleNodes(conversation, taxonNodes);
- }else if(taxa.size() == 0){
- // this is an undesired state
- MessagingUtils.warningDialog("Incorrect state", TaxonEditorInput.class, "Trying to open accepted taxon for a synonym or misapplication but" +
- " no accepted taxa are present. This should not have happened.");
- }
- return null;
+ private void setInputForMultipleTaxa(ConversationHolder conversation, Set<Taxon> taxa){
+ if(taxa.size() == 1){
+ Taxon taxon = taxa.iterator().next();
+ Set<TaxonNode> nodes = taxon.getTaxonNodes();
+ setInputForMultipleNodes(conversation, nodes);
+ }else if(taxa.size() > 1){
+ Set<TaxonNode> taxonNodes = new HashSet<TaxonNode>();
+ for ( Taxon taxon : taxa ){
+ taxonNodes.addAll(taxon.getTaxonNodes());
+ }
+ setInputForMultipleNodes(conversation, taxonNodes);
+ }else if(taxa.size() == 0){
+ // this is an undesired state
+ MessagingUtils.warningDialog("Incorrect state", TaxonEditorInput.class, "Trying to open accepted taxon for a synonym or misapplication but" +
+ " no accepted taxa are present. This should not have happened.");
+ }
}
/**
- * <p>NewEmptyInstance</p>
+ * <p>NewInstance</p>
*
- * @param parentNodeUuid a {@link java.util.UUID} object.
+ * @param taxonNodeUuid a {@link java.util.UUID} object.
* @return a {@link eu.etaxonomy.taxeditor.editor.TaxonEditorInput} object.
+ * @throws java.lang.Exception if any.
*/
- public static TaxonEditorInput NewEmptyInstance(UUID parentNodeUuid){
- ConversationHolder conversation = CdmStore.createConversation();
+ public static TaxonEditorInput NewInstance(UUID taxonNodeUuid) throws Exception {
+ return new TaxonEditorInput(taxonNodeUuid, CdmType.TAXON_NODE);
- TaxonNameBase<?, ?> name = PreferencesUtil.getPreferredNomenclaturalCode().getNewTaxonNameInstance(null);
- ITaxonTreeNode parentNode = CdmStore.getService(IClassificationService.class).getTreeNodeByUuid(parentNodeUuid);
+ }
- Taxon newTaxon = Taxon.NewInstance(name, parentNode.getReference());
- TaxonNode newTaxonNode = parentNode.addChildTaxon(newTaxon, parentNode.getReference(), parentNode.getMicroReference());
+ /**
+ * <p>NewInstanceFromTaxonBase</p>
+ *
+ * @param taxonBaseUuid a {@link java.util.UUID} object.
+ * @return a {@link eu.etaxonomy.taxeditor.editor.TaxonEditorInput} object.
+ */
+ public static TaxonEditorInput NewInstanceFromTaxonBase(UUID taxonBaseUuid){
+ return new TaxonEditorInput(taxonBaseUuid, CdmType.TAXON_BASE);
+ }
- // add the new taxon to the editors persistence context
- UUID newTaxonNodeUuid = CdmStore.getService(ITaxonNodeService.class).save(newTaxonNode).getUuid();
- return new TaxonEditorInput(newTaxonNode, conversation);
+ /**
+ * <p>NewEmptyInstance</p>
+ *
+ * @param parentNodeUuid a {@link java.util.UUID} object.
+ * @return a {@link eu.etaxonomy.taxeditor.editor.TaxonEditorInput} object.
+ */
+ public static TaxonEditorInput NewEmptyInstance(UUID parentNodeUuid){
+ return new TaxonEditorInput(parentNodeUuid, CdmType.PARENT_TAXON_NODE);
}
- /* (non-Javadoc)
- * @see org.eclipse.ui.IEditorInput#exists()
- */
- /**
- *
- * @return a boolean.
- */
- @Override
+ /* (non-Javadoc)
+ * @see org.eclipse.ui.IEditorInput#exists()
+ */
+ /**
+ * <p>exists</p>
+ *
+ * @return a boolean.
+ */
+ @Override
public boolean exists() {
- return taxonNode != null;
- }
-
- /* (non-Javadoc)
- * @see org.eclipse.ui.IEditorInput#getImageDescriptor()
- */
- /**
-
* <p>getImageDescriptor</p>
- *
- * @return a {@link org.eclipse.jface.resource.ImageDescriptor} object.
- */
- @Override
+ return taxonNode != null;
+ }
+
+ /* (non-Javadoc)
+ * @see org.eclipse.ui.IEditorInput#getImageDescriptor()
+ */
+ /**
+ * <p>getImageDescriptor</p>
+ *
+ * @return a {@link org.eclipse.jface.resource.ImageDescriptor} object.
+ */
+ @Override
public ImageDescriptor getImageDescriptor() {
- return null;
- }
-
- /* (non-Javadoc)
- * @see org.eclipse.ui.IEditorInput#getName()
- */
- /**
- *
- * @return a {@link java.lang.String} object.
- */
- @Override
+ return null;
+ }
+
+ /* (non-Javadoc)
+ * @see org.eclipse.ui.IEditorInput#getName()
+ */
+ /**
+ * <p>getName</p>
+ *
+ * @return a {@link java.lang.String} object.
+ */
+ @Override
public String getName() {
- if(getTaxon() == null){
- return null;
- }
- TaxonNameBase<?, ?> name = getTaxon().getName();
- if (name == null || name.getTitleCache() == null) {
- return "New taxon";
- } else {
- return name.getTitleCache();
- }
- }
-
- /* (non-Javadoc)
- * @see org.eclipse.ui.IEditorInput#getPersistable()
- */
- /**
-
* <p>getPersistable</p>
- *
- * @return a {@link org.eclipse.ui.IPersistableElement} object.
- */
- @Override
+ if(getTaxon() == null){
+ return null;
+ }
+ TaxonNameBase<?, ?> name = getTaxon().getName();
+ if (name == null || name.getTitleCache() == null) {
+ return "New taxon";
+ } else {
+ return name.getTitleCache();
+ }
+ }
+
+ /* (non-Javadoc)
+ * @see org.eclipse.ui.IEditorInput#getPersistable()
+ */
+ /**
+ * <p>getPersistable</p>
+ *
+ * @return a {@link org.eclipse.ui.IPersistableElement} object.
+ */
+ @Override
public IPersistableElement getPersistable() {
-// if(CdmStore.isActive()){
-// TaxonNode test = CdmStore.getTaxonTreeService().getTaxonNodeByUuid(taxonNode.getUuid());
-// boolean isPersistable = CdmStore.getTaxonTreeService().getTaxonNodeByUuid(taxonNode.getUuid()) != null;
-// if (isPersistable) {
-// return this;
-// }
-// }
- return null;
- }
-
- /* (non-Javadoc)
- * @see org.eclipse.ui.IEditorInput#getToolTipText()
- */
- /**
-
* <p>getToolTipText</p>
- *
- * @return a {@link java.lang.String} object.
- */
- @Override
+ // if(CdmStore.isActive()){
+ // TaxonNode test = CdmStore.getTaxonTreeService().getTaxonNodeByUuid(taxonNode.getUuid());
+ // boolean isPersistable = CdmStore.getTaxonTreeService().getTaxonNodeByUuid(taxonNode.getUuid()) != null;
+ // if (isPersistable) {
+ // return this;
+ // }
+ // }
+ return null;
+ }
+
+ /* (non-Javadoc)
+ * @see org.eclipse.ui.IEditorInput#getToolTipText()
+ */
+ /**
+ * <p>getToolTipText</p>
+ *
+ * @return a {@link java.lang.String} object.
+ */
+ @Override
public String getToolTipText() {
- return getName();
- }
-
- /* (non-Javadoc)
- * @see org.eclipse.core.runtime.IAdaptable#getAdapter(java.lang.Class)
- */
- /** {@inheritDoc} */
- @Override
+ return getName();
+ }
+
+ /* (non-Javadoc)
+ * @see org.eclipse.core.runtime.IAdaptable#getAdapter(java.lang.Class)
+ */
+ /** {@inheritDoc} */
+ @Override
public Object getAdapter(Class adapter) {
- if (adapter == Taxon.class) {
- return taxonNode.getTaxon();
- }
+ if (adapter == Taxon.class) {
+ return getTaxon();
+ }
- if (adapter == TaxonNode.class) {
- return taxonNode;
- }
+ if (adapter == TaxonNode.class) {
+ return taxonNode;
+ }
- return null;
- }
+ return null;
+ }
- /**
- * {@inheritDoc}
- *
- * Overrides equals to ensure that a taxon can only be edited by
- * one editor at a time.
- */
- @Override
+ /**
+ * {@inheritDoc}
+ *
+ * Overrides equals to ensure that a taxon can only be edited by
+ * one editor at a time.
+ */
+ @Override
public boolean equals(Object obj) {
- if (TaxonEditorInput.class.equals(obj.getClass())
- && getTaxon() != null
- && getTaxon().equals(((TaxonEditorInput) obj).getTaxon())){
- if(((TaxonEditorInput) obj).getInitiallySelectedTaxonBase() != null){
- setInitiallySelectedTaxonBase(((TaxonEditorInput) obj).getInitiallySelectedTaxonBase());
- }
- return true;
- }
- return false;
- }
-
- /**
- * <p>getTaxon</p>
- *
- * @return the taxon
- */
- public Taxon getTaxon(){
- return taxonNode.getTaxon();
- }
-
- /**
- * <p>Getter for the field <code>taxonNode</code>.</p>
- *
- * @return the taxonNode
- */
- public TaxonNode getTaxonNode() {
- return taxonNode;
- }
-
- /*
- * (non-Javadoc)
- * @see eu.etaxonomy.cdm.api.conversation.IConversationEnabled#getConversationHolder()
- */
- /**
- * <p>getConversationHolder</p>
- *
- * @return a {@link eu.etaxonomy.cdm.api.conversation.ConversationHolder} object.
- */
- @Override
+ if (TaxonEditorInput.class.equals(obj.getClass())
+ && getTaxon() != null
+ && getTaxon().equals(((TaxonEditorInput) obj).getTaxon())){
+ if(((TaxonEditorInput) obj).getInitiallySelectedTaxonBase() != null){
+ setInitiallySelectedTaxonBase(((TaxonEditorInput) obj).getInitiallySelectedTaxonBase());
+ }
+ return true;
+ }
+ return false;
+ }
+
+ /**
+ * <p>getTaxon</p>
+ *
+ * @return the taxon
+ */
+ public Taxon getTaxon(){
+ Taxon taxon = CdmBase.deproxy(taxonNode.getTaxon(), Taxon.class);
+ return taxon;
+ }
+
+ /**
+ * <p>Getter for the field <code>taxonNode</code>.</p>
+ *
+ * @return the taxonNode
+ */
+ public TaxonNode getTaxonNode() {
+ return taxonNode;
+ }
+
+ /*
+ * (non-Javadoc)
+ * @see eu.etaxonomy.cdm.api.conversation.IConversationEnabled#getConversationHolder()
+ */
+ /**
+ * <p>getConversationHolder</p>
+ *
+ * @return a {@link eu.etaxonomy.cdm.api.conversation.ConversationHolder} object.
+ */
+ @Override
public ConversationHolder getConversationHolder() {
- return conversation;
- }
-
- /*
- * (non-Javadoc)
- * @see eu.etaxonomy.cdm.persistence.hibernate.ICdmPostCrudObserver#update(eu.etaxonomy.cdm.persistence.hibernate.CdmCrudEvent)
- */
- /** {@inheritDoc} */
- @Override
+ return conversation;
+ }
+
+ /*
+ * (non-Javadoc)
+ * @see eu.etaxonomy.cdm.persistence.hibernate.ICdmPostCrudObserver#update(eu.etaxonomy.cdm.persistence.hibernate.CdmCrudEvent)
+ */
+ /** {@inheritDoc} */
+ @Override
public void update(CdmDataChangeMap events) {
- if(dataChangeBehavior == null){
- dataChangeBehavior = new TaxonEditorInputDataChangeBehaviour(this);
- }
-
- DataChangeBridge.handleDataChange(events, dataChangeBehavior);
- }
-
- /* (non-Javadoc)
- * @see org.eclipse.ui.IPersistableElement#getFactoryId()
- */
- /**
- *
- * @return a {@link java.lang.String} object.
- */
- @Override
+ if(dataChangeBehavior == null){
+ dataChangeBehavior = new TaxonEditorInputDataChangeBehaviour(this);
+ }
+
+ DataChangeBridge.handleDataChange(events, dataChangeBehavior);
+ }
+
+ /* (non-Javadoc)
+ * @see org.eclipse.ui.IPersistableElement#getFactoryId()
+ */
+ /**
+ * <p>getFactoryId</p>
+ *
+ * @return a {@link java.lang.String} object.
+ */
+ @Override
public String getFactoryId() {
- return TaxonEditorInputFactory.getFactoryId();
- }
-
- /* (non-Javadoc)
- * @see org.eclipse.ui.IPersistable#saveState(org.eclipse.ui.IMemento)
- */
- /** {@inheritDoc} */
- @Override
+ return TaxonEditorInputFactory.getFactoryId();
+ }
+
+ /* (non-Javadoc)
+ * @see org.eclipse.ui.IPersistable#saveState(org.eclipse.ui.IMemento)
+ */
+ /** {@inheritDoc} */
+ @Override
public void saveState(IMemento memento) {
- TaxonEditorInputFactory.saveState(memento, this);
- }
+ TaxonEditorInputFactory.saveState(memento, this);
+ }
/**
* @param taxonBase a {@link eu.etaxonomy.cdm.model.taxon.TaxonBase} object.
*/
public void setInitiallySelectedTaxonBase(TaxonBase taxonBase) {
- this.initiallySelectedTaxonBase = taxonBase;
- }
-
- /**
- * <p>Getter for the field <code>initiallySelectedTaxonBase</code>.</p>
- *
- * @return a {@link eu.etaxonomy.cdm.model.taxon.TaxonBase} object.
- */
- public TaxonBase getInitiallySelectedTaxonBase() {
- return initiallySelectedTaxonBase;
- }
-
- @Override
- public String toString() {
- return String.format("%s[%s]", this.getClass().getSimpleName(), getTaxon());
- }
+ this.initiallySelectedTaxonBase = taxonBase;
+ }
+
+ /**
+ * <p>Getter for the field <code>initiallySelectedTaxonBase</code>.</p>
+ *
+ * @return a {@link eu.etaxonomy.cdm.model.taxon.TaxonBase} object.
+ */
+ public TaxonBase getInitiallySelectedTaxonBase() {
+ return initiallySelectedTaxonBase;
+ }
+
+// @Override
+// public String toString() {
+// return String.format("%s[%s]", this.getClass().getSimpleName(), getTaxon());
+// }
+
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled#getRootEntities()
+ */
+ @Override
+ public List<TaxonNode> getRootEntities() {
+ return Arrays.asList(taxonNode);
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.editor.CdmEntitySessionInput#merge()
+ */
+ @Override
+ public void merge() {
+ if(CdmStore.getCurrentSessionManager().isRemoting()) {
+ CdmStore.getService(ITaxonNodeService.class).merge(taxonNode, true);
+ }
+ }
+
+ @Override
+ public Map<Object, List<String>> getPropertyPathsMap() {
+ return null;
+ }
+
+ private List<String> getTaxonNodePropertyPaths() {
+ List<String> taxonNodePropertyPaths = new ArrayList<String>();
+ for(String propertyPath : getTaxonBasePropertyPaths()) {
+ taxonNodePropertyPaths.add("taxon." + propertyPath);
+ }
+ return taxonNodePropertyPaths;
+ }
+
+ private List<String> getTaxonBasePropertyPaths() {
+ List<String> taxonBasePropertyPaths = Arrays.asList(new String[] {
+ "sec",
+ "createdBy",
+ "updatedBy",
+ "annotations",
+ "markers",
+ "credits",
+ "extensions",
+ "rights",
+ "sources",
+ "descriptions",
+ "relationsToThisTaxon",
+ "relationsFromThisTaxon",
+ "taxonNodes",
+ "descriptions.descriptionElements.feature",
+ "descriptions.descriptionElements.area",
+ "descriptions.descriptionElements.status",
+ "descriptions.markers",
+ "name.descriptions",
+ "name.typeDesignations",
+ "name.status",
+ "name.nomenclaturalReference.inReference",
+ "name.taxonBases.taxonNodes",
+ "name.relationsFromThisName",
+ "name.relationsToThisName",
+ "name.homotypicalGroup.typifiedNames.taxonBases.synonymRelations.synonym.name.status",
+ "name.homotypicalGroup.typifiedNames.relationsToThisName.fromName",
+ "synonymRelations.synonym.name.status.type",
+ "synonymRelations.synonym.name.relationsToThisName.fromName",
+ "synonymRelations.synonym.name.nomenclaturalReference.inReference.authorship",
+ "synonymRelations.synonym.name.nomenclaturalReference.authorship",
+ "synonymRelations.synonym.name.homotypicalGroup.typifiedNames.taxonBases.synonymRelations"
+ });
+
+ return taxonBasePropertyPaths;
+ }
+
}
@Override
public void setFocus() {
PlatformUI.getWorkbench().getActiveWorkbenchWindow().getShell().setFocus();
+ ((CdmAuthorityEditorInput) getEditorInput()).bind();
}
/* (non-Javadoc)
try {
monitor.beginTask("Saving CDM Authority Editor", 1);
getConversationHolder().commit(true);
+ ((CdmAuthorityEditorInput) getEditorInput()).merge();
dirty = false;
firePropertyChange(PROP_DIRTY);
monitor.worked(1);
public void dispose() {
conversation.unregisterForDataStoreChanges(this);
conversation.close();
+ ((CdmAuthorityEditorInput) getEditorInput()).getCdmEntitySession().dispose();
super.dispose();
}
}
/**
* Copyright (C) 2007 EDIT
-* European Distributed Institute of Taxonomy
+* European Distributed Institute of Taxonomy
* http://www.e-taxonomy.eu
-*
+*
* The contents of this file are subject to the Mozilla Public License Version 1.1
* See LICENSE.TXT at the top of this package for the full license terms.
*/
package eu.etaxonomy.taxeditor.editor.group.authority;
+import java.util.Arrays;
+import java.util.Collection;
import java.util.UUID;
import org.eclipse.jface.resource.ImageDescriptor;
import org.eclipse.ui.IEditorInput;
import org.eclipse.ui.IPersistableElement;
+import eu.etaxonomy.cdm.api.application.CdmApplicationState;
import eu.etaxonomy.cdm.api.conversation.ConversationHolder;
import eu.etaxonomy.cdm.api.conversation.IConversationEnabled;
import eu.etaxonomy.cdm.api.service.IGroupService;
import eu.etaxonomy.cdm.model.common.Group;
import eu.etaxonomy.cdm.persistence.hibernate.CdmDataChangeMap;
+import eu.etaxonomy.taxeditor.editor.CdmEntitySessionInput;
import eu.etaxonomy.taxeditor.store.CdmStore;
/**
* Editor input for the {@link CdmAuthorityEditor}.
- *
+ *
* @author cmathew
* @created Mar 28, 2013
*
*/
-public class CdmAuthorityEditorInput implements IEditorInput, IConversationEnabled {
+public class CdmAuthorityEditorInput extends CdmEntitySessionInput implements IEditorInput, IConversationEnabled {
private ConversationHolder conversation;
private Group group;
-
+
protected CdmAuthorityEditorInput(ConversationHolder conversation, Group group) {
+ super(true);
this.conversation = conversation;
- this.group = group;
-
+ this.group = CdmApplicationState.getCurrentAppConfig().getGroupService().load(group.getUuid());
+
}
-
+
/**
* Creates a new instance of the input for a given group.
- *
+ *
* @param groupUuid
* @return
* @throws Exception
*/
public static CdmAuthorityEditorInput NewInstance(UUID groupUuid) throws Exception{
ConversationHolder conversation = CdmStore.createConversation();
- Group group = CdmStore.getService(IGroupService.class).load(groupUuid, null);
+ Group group = CdmStore.getService(IGroupService.class).load(groupUuid, null);
return new CdmAuthorityEditorInput(conversation, group);
}
-
+
/* (non-Javadoc)
* @see org.eclipse.core.runtime.IAdaptable#getAdapter(java.lang.Class)
*/
public Object getAdapter(Class adapter) {
if (adapter == Group.class) {
return this.group;
- }
-
+ }
+
return null;
}
/* (non-Javadoc)
@Override
public void update(CdmDataChangeMap changeEvents) {
// TODO Auto-generated method stub
-
+
}
/* (non-Javadoc)
* @see eu.etaxonomy.cdm.api.conversation.IConversationEnabled#getConversationHolder()
@Override
public String getToolTipText() {
return getName();
- }
-
+ }
+
/* (non-Javadoc)
* @see java.lang.Object#equals(java.lang.Object)
*/
}
return super.equals(object);
}
-
+
/**
* Getter method for group member.
- *
+ *
* @return
*/
public Group getGroup() {
return this.group;
}
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled#getRootEntities()
+ */
+ @Override
+ public Collection<Group> getRootEntities() {
+ return Arrays.asList(group);
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.editor.CdmEntitySessionInput#merge()
+ */
+ @Override
+ public void merge() {
+ if(CdmStore.getCurrentSessionManager().isRemoting()) {
+ group = CdmStore.getService(IGroupService.class).merge(group, true).getMergedEntity();
+ }
+ }
}
public class OpenDerivateViewHandler extends AbstractHandler {
- /* (non-Javadoc)
- * @see org.eclipse.core.commands.IHandler#execute(org.eclipse.core.commands.ExecutionEvent)
- */
@Override
public Object execute(ExecutionEvent event) throws ExecutionException {
- ISelection currentSelection = HandlerUtil.getCurrentSelection(event);
- if(currentSelection instanceof IStructuredSelection){
- Iterator<?> selectionIterator = ((IStructuredSelection) currentSelection).iterator();
- Set<UUID> selectedElementUUIDs = new HashSet<UUID>();
- while(selectionIterator.hasNext()){
- Object object = selectionIterator.next();
- if(object instanceof SpecimenOrObservationBase<?>){
- selectedElementUUIDs.add(((SpecimenOrObservationBase<?>) object).getUuid());
- }
- else if(object instanceof IndividualsAssociation){
- SpecimenOrObservationBase specimen = ((IndividualsAssociation) object).getAssociatedSpecimenOrObservation();
- if(specimen!=null){
- selectedElementUUIDs.add(specimen.getUuid());
+ Set<UUID> selectedElementUUIDs = new HashSet<UUID>();
+ Object parameter;
+ //check if parameter is set
+ try {
+ parameter = event.getObjectParameterForExecution("eu.etaxonomy.taxeditor.specimenUuidParameter");
+ } catch (ExecutionException e) {
+ parameter = null;
+ }
+ if(parameter instanceof UUID){
+ selectedElementUUIDs.add((UUID) parameter);
+ }
+ else{
+ //if not, try with current selection
+ ISelection currentSelection = HandlerUtil.getCurrentSelection(event);
+ if(currentSelection instanceof IStructuredSelection){
+ Iterator<?> selectionIterator = ((IStructuredSelection) currentSelection).iterator();
+ while(selectionIterator.hasNext()){
+ Object object = selectionIterator.next();
+ if(object instanceof SpecimenOrObservationBase<?>){
+ selectedElementUUIDs.add(((SpecimenOrObservationBase<?>) object).getUuid());
+ }
+ else if(object instanceof IndividualsAssociation){
+ SpecimenOrObservationBase specimen = ((IndividualsAssociation) object).getAssociatedSpecimenOrObservation();
+ if(specimen!=null){
+ selectedElementUUIDs.add(specimen.getUuid());
+ }
}
}
}
- if(!selectedElementUUIDs.isEmpty()){
- DerivateViewEditorInput input = new DerivateViewEditorInput(selectedElementUUIDs);
- try {
- EditorUtil.open(input);
- } catch (PartInitException e) {
- MessagingUtils.error(OpenDerivateViewHandler.class, "Could not open Derivative Editor", e);
- } catch (NullPointerException npe){
- MessagingUtils.messageDialog("Failed to open Editor", OpenDerivateViewHandler.class, "Could not open Derivative Editor. The derivate hierarchy is corrupted!", npe);
- }
- }
- else{
- MessagingUtils.informationDialog("Empty selection", "No Specimen selected.");
+ }
+ if(!selectedElementUUIDs.isEmpty()){
+ DerivateViewEditorInput input = new DerivateViewEditorInput(selectedElementUUIDs);
+ try {
+ EditorUtil.open(input);
+ } catch (PartInitException e) {
+ MessagingUtils.error(OpenDerivateViewHandler.class, "Could not open Derivative Editor", e);
+ } catch (NullPointerException npe){
+ MessagingUtils.messageDialog("Failed to open Editor", OpenDerivateViewHandler.class, "Could not open Derivative Editor. The derivate hierarchy is corrupted!", npe);
}
}
+ else{
+ MessagingUtils.informationDialog("Empty selection", "No Specimen selected.");
+ }
return null;
}
package eu.etaxonomy.taxeditor.editor.handler.create;
-import java.util.Collections;
-
import org.apache.log4j.Logger;
import org.eclipse.core.commands.AbstractHandler;
import org.eclipse.core.commands.ExecutionEvent;
import org.eclipse.core.commands.ExecutionException;
-import org.eclipse.ui.PartInitException;
+import org.eclipse.jface.wizard.WizardDialog;
+import org.eclipse.ui.handlers.HandlerUtil;
-import eu.etaxonomy.cdm.api.conversation.ConversationHolder;
-import eu.etaxonomy.cdm.api.facade.DerivedUnitFacadeCacheStrategy;
-import eu.etaxonomy.cdm.api.facade.DerivedUnitFacadeFieldUnitCacheStrategy;
-import eu.etaxonomy.cdm.api.service.IOccurrenceService;
-import eu.etaxonomy.cdm.model.occurrence.DerivationEvent;
-import eu.etaxonomy.cdm.model.occurrence.DerivationEventType;
-import eu.etaxonomy.cdm.model.occurrence.DerivedUnit;
-import eu.etaxonomy.cdm.model.occurrence.FieldUnit;
-import eu.etaxonomy.cdm.model.occurrence.SpecimenOrObservationType;
-import eu.etaxonomy.taxeditor.editor.EditorUtil;
-import eu.etaxonomy.taxeditor.editor.view.derivate.DerivateViewEditorInput;
-import eu.etaxonomy.taxeditor.store.CdmStore;
+import eu.etaxonomy.taxeditor.newWizard.NewDerivedUnitBaseWizard;
/**
- * <p>NewSpecimenHandler class.</p>
- *
* @author n.hoffmann
* @created Jun 16, 2010
* @version 1.0
private static final Logger logger = Logger
.getLogger(NewSpecimenHandler.class);
- /* (non-Javadoc)
- * @see org.eclipse.core.commands.IHandler#execute(org.eclipse.core.commands.ExecutionEvent)
- */
/** {@inheritDoc} */
@Override
public Object execute(ExecutionEvent event) throws ExecutionException {
- ConversationHolder conversation = CdmStore.createConversation();
- conversation.bind();
- FieldUnit fieldUnit = FieldUnit.NewInstance();
- DerivedUnit derivedUnit = DerivedUnit.NewInstance(SpecimenOrObservationType.PreservedSpecimen);
- DerivationEvent.NewSimpleInstance(fieldUnit, derivedUnit, DerivationEventType.GATHERING_IN_SITU());
- fieldUnit.setCacheStrategy(new DerivedUnitFacadeFieldUnitCacheStrategy());
- derivedUnit.setCacheStrategy(new DerivedUnitFacadeCacheStrategy());
- CdmStore.getService(IOccurrenceService.class).save(fieldUnit);
- CdmStore.getService(IOccurrenceService.class).save(derivedUnit);
- conversation.commit();
- DerivateViewEditorInput input = new DerivateViewEditorInput(Collections.singleton(fieldUnit.getUuid()));
- try {
- EditorUtil.open(input);
- } catch (PartInitException e) {
- // TODO Auto-generated catch block
- e.printStackTrace();
- }
-// NewDerivedUnitBaseWizard wizard = new NewDerivedUnitBaseWizard();
-// wizard.init(null, null);
-// WizardDialog dialog = new WizardDialog(HandlerUtil.getActiveShell(event), wizard);
-// dialog.open();
+
+ //TODO: we need to discuss how specimens should be created and handled #5244
+// ConversationHolder conversation = CdmStore.createConversation();
+// conversation.bind();
+// FieldUnit fieldUnit = FieldUnit.NewInstance();
+// DerivedUnit derivedUnit = DerivedUnit.NewInstance(SpecimenOrObservationType.PreservedSpecimen);
+// DerivationEvent.NewSimpleInstance(fieldUnit, derivedUnit, DerivationEventType.GATHERING_IN_SITU());
+// fieldUnit.setCacheStrategy(new DerivedUnitFacadeFieldUnitCacheStrategy());
+// derivedUnit.setCacheStrategy(new DerivedUnitFacadeCacheStrategy());
+// CdmStore.getService(IOccurrenceService.class).save(fieldUnit);
+// CdmStore.getService(IOccurrenceService.class).save(derivedUnit);
+// conversation.commit();
+// DerivateViewEditorInput input = new DerivateViewEditorInput(Collections.singleton(fieldUnit.getUuid()));
+// try {
+// EditorUtil.open(input);
+// } catch (PartInitException e) {
+// // TODO Auto-generated catch block
+// e.printStackTrace();
+// }
+ NewDerivedUnitBaseWizard wizard = new NewDerivedUnitBaseWizard();
+ wizard.init(null, null);
+ WizardDialog dialog = new WizardDialog(HandlerUtil.getActiveShell(event), wizard);
+ dialog.open();
return null;
}
}
/**
- *
+ *
*/
package eu.etaxonomy.taxeditor.editor.key;
import eu.etaxonomy.cdm.api.conversation.IConversationEnabled;
import eu.etaxonomy.cdm.model.description.IIdentificationKey;
import eu.etaxonomy.cdm.persistence.hibernate.CdmDataChangeMap;
+import eu.etaxonomy.taxeditor.editor.CdmEntitySessionInput;
/**
* @author n.hoffmann
- *
+ *
*/
public abstract class AbstractIdentificationEditorInput<T extends IIdentificationKey>
- implements IEditorInput, IConversationEnabled {
+ extends CdmEntitySessionInput implements IEditorInput, IConversationEnabled {
private final ConversationHolder conversation;
protected AbstractIdentificationEditorInput(ConversationHolder conversation) {
+ super(true);
this.conversation = conversation;
}
/*
* (non-Javadoc)
- *
+ *
* @see org.eclipse.core.runtime.IAdaptable#getAdapter(java.lang.Class)
*/
@Override
/*
* (non-Javadoc)
- *
+ *
* @see org.eclipse.ui.IEditorInput#exists()
*/
@Override
/*
* (non-Javadoc)
- *
+ *
* @see org.eclipse.ui.IEditorInput#getImageDescriptor()
*/
@Override
/*
* (non-Javadoc)
- *
+ *
* @see org.eclipse.ui.IEditorInput#getPersistable()
*/
@Override
/*
* (non-Javadoc)
- *
+ *
* @see org.eclipse.ui.IEditorInput#getToolTipText()
*/
@Override
/*
* (non-Javadoc)
- *
+ *
* @see org.eclipse.ui.IEditorInput#getName()
*/
@Override
@Override
public void update(CdmDataChangeMap changeEvents) {
}
-
+
/* (non-Javadoc)
* @see java.lang.Object#equals(java.lang.Object)
*/
package eu.etaxonomy.taxeditor.editor.key;
import org.eclipse.core.runtime.IProgressMonitor;
+import org.eclipse.ui.IEditorInput;
import org.eclipse.ui.IEditorPart;
+import org.eclipse.ui.IEditorSite;
import org.eclipse.ui.PartInitException;
import org.eclipse.ui.forms.editor.FormEditor;
+import eu.etaxonomy.cdm.api.application.CdmApplicationState;
+import eu.etaxonomy.cdm.api.application.CdmChangeEvent;
+import eu.etaxonomy.cdm.api.application.ICdmChangeListener;
import eu.etaxonomy.cdm.api.conversation.ConversationHolder;
import eu.etaxonomy.cdm.api.conversation.IConversationEnabled;
+import eu.etaxonomy.cdm.model.common.CdmBase;
import eu.etaxonomy.cdm.model.description.PolytomousKey;
import eu.etaxonomy.cdm.persistence.hibernate.CdmDataChangeMap;
+import eu.etaxonomy.taxeditor.editor.key.polytomous.PolytomousKeyEditorInput;
import eu.etaxonomy.taxeditor.editor.key.polytomous.PolytomousKeyGraphEditor;
import eu.etaxonomy.taxeditor.editor.key.polytomous.PolytomousKeyListEditor;
import eu.etaxonomy.taxeditor.model.DataChangeBridge;
* @version 1.0
*/
public class KeyEditor extends FormEditor implements IConversationEnabled,
- IDirtyMarkable, IPartContentHasDetails {
+ IDirtyMarkable, IPartContentHasDetails, ICdmChangeListener {
public static final String ID = "eu.etaxonomy.taxeditor.editor.key";
private KeyEditorDataChangeBehaviour dataChangeBehavior;
+ private PolytomousKeyEditorInput polytomousKeyEditorInput;
+
+ /*
+ * (non-Javadoc)
+ *
+ * @see org.eclipse.ui.part.EditorPart#init(org.eclipse.ui.IEditorSite,
+ * org.eclipse.ui.IEditorInput)
+ */
+ @Override
+ public void init(IEditorSite site, IEditorInput input)
+ throws PartInitException {
+ polytomousKeyEditorInput = (PolytomousKeyEditorInput)input;
+ CdmApplicationState.getCurrentDataChangeService().register(this);
+ super.init(site, input);
+ }
+
/*
* (non-Javadoc)
*
monitor.beginTask("Saving Editor", 1);
getConversationHolder().bind();
getConversationHolder().commit(true);
+ polytomousKeyEditorInput.merge();
setDirty(false);
monitor.worked(1);
} finally {
public void setFocus() {
getConversationHolder().commit(true);
getConversationHolder().bind();
+ polytomousKeyEditorInput.bind();
super.setFocus();
}
/*
public void dispose() {
conversation.unregisterForDataStoreChanges(this);
conversation.close();
+ polytomousKeyEditorInput.dispose();
+ CdmApplicationState.getCurrentDataChangeService().unregister(this);
super.dispose();
}
*/
@Override
protected void addPages() {
- AbstractIdentificationEditorInput input = (AbstractIdentificationEditorInput) getEditorInput();
- conversation = input.getConversationHolder();
+ conversation = polytomousKeyEditorInput.getConversationHolder();
conversation.registerForDataStoreChanges(this);
try {
- addPage(0, new PolytomousKeyListEditor(this), input);
+ addPage(0, new PolytomousKeyListEditor(this), polytomousKeyEditorInput);
setPageText(0, "List");
- addPage(1, new PolytomousKeyGraphEditor(this), input);
+ addPage(1, new PolytomousKeyGraphEditor(this), polytomousKeyEditorInput);
setPageText(1, "Graph");
} catch (PartInitException e) {
MessagingUtils.error(getClass(), e);
*
*/
public void setPartName() {
- AbstractIdentificationEditorInput input = (AbstractIdentificationEditorInput) getEditorInput();
- PolytomousKey key = (PolytomousKey) input.getKey();
+ PolytomousKey key = polytomousKeyEditorInput.getKey();
setPartName(key.getTitleCache());
}
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.cdm.api.application.ICdmChangeListener#onChange(eu.etaxonomy.cdm.api.application.CdmChangeEvent)
+ */
+ @Override
+ public void onChange(CdmChangeEvent event) {
+ editorDirtyStateChanged();
+ IEditorPart activeEditor = getActiveEditor();
+ if (activeEditor instanceof IDirtyMarkable) {
+ for(CdmBase cdmBase : event.getChangedObjects()) {
+ ((IDirtyMarkable) activeEditor).changed(cdmBase);
+ }
+ }
+ }
}
/**
- *
+ *
*/
package eu.etaxonomy.taxeditor.editor.key.polytomous;
+import java.util.Arrays;
+import java.util.HashMap;
+import java.util.List;
+import java.util.Map;
import java.util.UUID;
import eu.etaxonomy.cdm.api.conversation.ConversationHolder;
*/
public class PolytomousKeyEditorInput extends AbstractIdentificationEditorInput<PolytomousKey> {
- private PolytomousKey key;
-
- protected PolytomousKeyEditorInput(ConversationHolder conversation,
- PolytomousKey key) {
- super(conversation);
- this.key = key;
- }
-
-
-
- public static PolytomousKeyEditorInput NewInstance(UUID polytomousKeyUuid) throws Exception{
- try{
- ConversationHolder conversation = CdmStore.createConversation();
-
- return NewInstance(polytomousKeyUuid, conversation);
- }catch(Exception e){
- throw e;
- }
- }
-
- public static PolytomousKeyEditorInput NewInstance(UUID polytomousKeyUuid, ConversationHolder conversation) throws Exception{
- PolytomousKey polytomousKey = CdmStore.getService(IPolytomousKeyService.class).load(polytomousKeyUuid, null);
-
- return new PolytomousKeyEditorInput(conversation, polytomousKey);
- }
-
- /* (non-Javadoc)
- * @see org.eclipse.ui.IEditorInput#getName()
- */
- @Override
- public String getName() {
- return key.getTitleCache();
- }
-
- @Override
- public PolytomousKey getKey() {
- return key;
- }
-
- /* (non-Javadoc)
- * @see java.lang.Object#equals(java.lang.Object)
- */
- @Override
- public boolean equals(Object object) {
- if (object instanceof PolytomousKeyEditorInput
- && getKey() != null
- && getKey().equals(((PolytomousKeyEditorInput) object).getKey())
- ){
- return true;
- }
- return super.equals(object);
- }
+ private final String name;
+ private final UUID keyUuid;
+ private PolytomousKey key;
+
+
+ protected PolytomousKeyEditorInput(ConversationHolder conversation,
+ UUID polytomousKeyUuid) {
+ super(conversation);
+ this.keyUuid = polytomousKeyUuid;
+ this.key = CdmStore.getService(IPolytomousKeyService.class).load(polytomousKeyUuid, null);
+ this.name = key.getTitleCache();
+ }
+
+// public PolytomousKeyEditorInput(UUID polytomousKeyUuid, String name) {
+// super(CdmStore.createConversation());
+// this.keyUuid = polytomousKeyUuid;
+// this.name = name;
+// }
+
+
+ public static PolytomousKeyEditorInput NewInstance(UUID polytomousKeyUuid) throws Exception{
+ try{
+ ConversationHolder conversation = CdmStore.createConversation();
+ return new PolytomousKeyEditorInput(conversation, polytomousKeyUuid);
+ }catch(Exception e){
+ throw e;
+ }
+ }
+
+
+ /* (non-Javadoc)
+ * @see org.eclipse.ui.IEditorInput#getName()
+ */
+ @Override
+ public String getName() {
+ return name;
+ }
+
+ @Override
+ public PolytomousKey getKey() {
+ return key;
+ }
+
+ /* (non-Javadoc)
+ * @see java.lang.Object#equals(java.lang.Object)
+ */
+ @Override
+ public boolean equals(Object object) {
+ if (object instanceof PolytomousKeyEditorInput
+ && getKey() != null
+ && getKey().equals(((PolytomousKeyEditorInput) object).getKey())
+ ){
+ return true;
+ }
+ return super.equals(object);
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled#getRootEntities()
+ */
+ @Override
+ public List<PolytomousKey> getRootEntities() {
+ return Arrays.asList(key);
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.editor.CdmEntitySessionInput#merge()
+ */
+ @Override
+ public void merge() {
+ if(CdmStore.getCurrentSessionManager().isRemoting()) {
+ key = CdmStore.getService(IPolytomousKeyService.class).merge(key,true).getMergedEntity();
+ }
+ }
+
+ @Override
+ public Map<Object, List<String>> getPropertyPathsMap() {
+ Map<Object,List<String>> propertyPathsMap = new HashMap<Object,List<String>>();
+
+ List<String> polytomousKeyNodePropertyPaths = Arrays.asList(new String[] {
+ "statement"
+ });
+ propertyPathsMap.put("children", polytomousKeyNodePropertyPaths);
+ return propertyPathsMap;
+ }
+
}
--- /dev/null
+// $Id$
+/**
+* Copyright (C) 2015 EDIT
+* European Distributed Institute of Taxonomy
+* http://www.e-taxonomy.eu
+*
+* The contents of this file are subject to the Mozilla Public License Version 1.1
+* See LICENSE.TXT at the top of this package for the full license terms.
+*/
+package eu.etaxonomy.taxeditor.editor.key.polytomous;
+
+/**
+ * @author cmathew
+ * @date 21 Jul 2015
+ *
+ */
+public interface PolytomousKeyEditorLabels {
+
+ public static final String CREATE_CHILD_POLYTOMOUS_KEY_NODE_LABEL = "Create Child Polytomous Key Node";
+ public static final String CREATE_SIBLING_POLYTOMOUS_KEY_NODE_LABEL = "Create Sibling Polytomous Key Node";
+
+ public static final String NO_KEY_NODE_FOR_CHILD_SELECTED_MESSAGE = "No Key Node Selected.Please right-click on a specific key node to create a new child key node.";
+ public static final String NO_KEY_NODE_FOR_SIBLING_SELECTED_MESSAGE = "No Key Node Selected.Please right-click on a specific key node to create a new sibling key node.";
+}
// $Id$
/**
* Copyright (C) 2007 EDIT
- * European Distributed Institute of Taxonomy
+ * European Distributed Institute of Taxonomy
* http://www.e-taxonomy.eu
- *
+ *
* The contents of this file are subject to the Mozilla Public License Version 1.1
* See LICENSE.TXT at the top of this package for the full license terms.
*/
import org.eclipse.jface.viewers.IStructuredContentProvider;
import org.eclipse.jface.viewers.Viewer;
-import eu.etaxonomy.cdm.model.description.PolytomousKey;
import eu.etaxonomy.cdm.model.description.PolytomousKeyNode;
/**
/*
* (non-Javadoc)
- *
+ *
* @see org.eclipse.jface.viewers.IContentProvider#dispose()
*/
@Override
/*
* (non-Javadoc)
- *
+ *
* @see
* org.eclipse.jface.viewers.IContentProvider#inputChanged(org.eclipse.jface
* .viewers.Viewer, java.lang.Object, java.lang.Object)
/*
* (non-Javadoc)
- *
+ *
* @see
* org.eclipse.jface.viewers.IStructuredContentProvider#getElements(java
* .lang.Object)
*/
@Override
public Object[] getElements(Object inputElement) {
- if (inputElement instanceof PolytomousKey) {
+ if (inputElement instanceof PolytomousKeyEditorInput) {
List<PolytomousKeyNode> result = new ArrayList<PolytomousKeyNode>();
- PolytomousKeyNode root = ((PolytomousKey) inputElement).getRoot();
+ PolytomousKeyNode root = ((PolytomousKeyEditorInput) inputElement).getKey().getRoot();
getChildrenBreadthFirst(result, root);
return result.toArray();
*/
@Override
public void doSave(IProgressMonitor monitor) {
-
}
/*
setPartName(key.getTitleCache());
- viewer.setInput(key);
+ viewer.setInput(getEditorInput());
}
public int getTableItemCount() {
}
public PolytomousKey getViewerInputKey() {
- return (PolytomousKey) viewer.getInput();
+ return ((PolytomousKeyEditorInput) viewer.getInput()).getKey();
}
private void createMenu() {
// register context menu
*/
@Override
public void changed(Object element) {
- if(element != null) {
- viewer.update(element, null);
- }
-
- if (element instanceof PolytomousKeyNode) {
- List<PolytomousKeyNode> children = ((PolytomousKeyNode) element)
- .getParent().getChildren();
- for (PolytomousKeyNode child : children) {
- viewer.update(child, null);
- }
- }
+ if(element != null) {
+ viewer.update(element, null);
+ }
+ if (element instanceof PolytomousKeyNode) {
+ List<PolytomousKeyNode> children = ((PolytomousKeyNode) element)
+ .getParent().getChildren();
+ for (PolytomousKeyNode child : children) {
+ viewer.update(child, null);
+ }
+ }
+ viewer.refresh();
}
/* (non-Javadoc)
--- /dev/null
+// $Id$
+/**
+ * Copyright (C) 2015 EDIT
+ * European Distributed Institute of Taxonomy
+ * http://www.e-taxonomy.eu
+ *
+ * The contents of this file are subject to the Mozilla Public License Version 1.1
+ * See LICENSE.TXT at the top of this package for the full license terms.
+ */
+package eu.etaxonomy.taxeditor.editor.key.polytomous.handler;
+
+import org.eclipse.core.commands.ExecutionEvent;
+import org.eclipse.core.commands.operations.AbstractOperation;
+import org.eclipse.core.runtime.IStatus;
+import org.eclipse.core.runtime.Status;
+import org.eclipse.jface.viewers.IStructuredSelection;
+import org.eclipse.ui.IEditorPart;
+import org.eclipse.ui.handlers.HandlerUtil;
+
+import eu.etaxonomy.cdm.model.description.PolytomousKey;
+import eu.etaxonomy.cdm.model.description.PolytomousKeyNode;
+import eu.etaxonomy.taxeditor.editor.key.KeyEditor;
+import eu.etaxonomy.taxeditor.editor.key.polytomous.IPolytomousKeyEditorPage;
+import eu.etaxonomy.taxeditor.editor.key.polytomous.PolytomousKeyEditorLabels;
+import eu.etaxonomy.taxeditor.editor.key.polytomous.PolytomousKeyListEditor;
+import eu.etaxonomy.taxeditor.editor.key.polytomous.operation.RemotingCreatePolytomousKeyNodeOperation;
+import eu.etaxonomy.taxeditor.operation.RemotingCdmHandler;
+
+/**
+ * @author cmathew
+ * @date 21 Jul 2015
+ *
+ */
+public class RemotingCreateChildPolytomousKeyNodeHandler extends RemotingCdmHandler {
+
+ private PolytomousKeyNode parentNode;
+
+ public RemotingCreateChildPolytomousKeyNodeHandler() {
+ super(PolytomousKeyEditorLabels.CREATE_CHILD_POLYTOMOUS_KEY_NODE_LABEL);
+ }
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.operation.RemotingCdmHandler#allowOperations(org.eclipse.core.commands.ExecutionEvent)
+ */
+ @Override
+ public IStatus allowOperations(ExecutionEvent event) {
+ IEditorPart editor = HandlerUtil.getActiveEditor(event);
+
+ if (editor instanceof KeyEditor) {
+ IPolytomousKeyEditorPage editorPage = (IPolytomousKeyEditorPage) ((KeyEditor) editor)
+ .getActiveEditor();
+
+ if (editorPage instanceof PolytomousKeyListEditor) {
+ PolytomousKeyListEditor klEditor = (PolytomousKeyListEditor) editorPage;
+ if(klEditor.getTableItemCount() == 0) {
+ PolytomousKey pk = klEditor.getViewerInputKey();
+ parentNode = pk.getRoot();
+
+ } else {
+ IStructuredSelection selection = (IStructuredSelection) HandlerUtil.getCurrentSelection(event);
+ if (selection.getFirstElement() instanceof PolytomousKeyNode) {
+ parentNode = (PolytomousKeyNode) selection.getFirstElement();
+ } else {
+ return new Status(IStatus.ERROR,
+ "unknown",
+ PolytomousKeyEditorLabels.NO_KEY_NODE_FOR_CHILD_SELECTED_MESSAGE);
+ }
+ }
+ }
+ }
+ return Status.OK_STATUS;
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.operation.RemotingCdmHandler#prepareOperation(org.eclipse.core.commands.ExecutionEvent)
+ */
+ @Override
+ public AbstractOperation prepareOperation(ExecutionEvent event) {
+ return new RemotingCreatePolytomousKeyNodeOperation(event.getTrigger(), false, parentNode);
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.operation.RemotingCdmHandler#onComplete()
+ */
+ @Override
+ public void onComplete() {
+ // TODO Auto-generated method stub
+
+ }
+
+}
--- /dev/null
+// $Id$
+/**
+* Copyright (C) 2015 EDIT
+* European Distributed Institute of Taxonomy
+* http://www.e-taxonomy.eu
+*
+* The contents of this file are subject to the Mozilla Public License Version 1.1
+* See LICENSE.TXT at the top of this package for the full license terms.
+*/
+package eu.etaxonomy.taxeditor.editor.key.polytomous.handler;
+
+import org.eclipse.core.commands.ExecutionEvent;
+import org.eclipse.core.commands.operations.AbstractOperation;
+import org.eclipse.core.runtime.IStatus;
+import org.eclipse.core.runtime.Status;
+import org.eclipse.jface.viewers.IStructuredSelection;
+import org.eclipse.ui.handlers.HandlerUtil;
+
+import eu.etaxonomy.cdm.model.description.PolytomousKeyNode;
+import eu.etaxonomy.taxeditor.editor.key.polytomous.PolytomousKeyEditorLabels;
+import eu.etaxonomy.taxeditor.editor.key.polytomous.operation.RemotingCreatePolytomousKeyNodeOperation;
+import eu.etaxonomy.taxeditor.operation.RemotingCdmHandler;
+
+/**
+ * @author cmathew
+ * @date 21 Jul 2015
+ *
+ */
+public class RemotingCreateSiblingPolytomousKeyNodeHandler extends RemotingCdmHandler {
+
+ private PolytomousKeyNode parentNode;
+
+ public RemotingCreateSiblingPolytomousKeyNodeHandler() {
+ super(PolytomousKeyEditorLabels.CREATE_SIBLING_POLYTOMOUS_KEY_NODE_LABEL);
+ }
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.operation.RemotingCdmHandler#allowOperations(org.eclipse.core.commands.ExecutionEvent)
+ */
+ @Override
+ public IStatus allowOperations(ExecutionEvent event) {
+
+ IStructuredSelection selection = (IStructuredSelection) HandlerUtil.getCurrentSelection(event);
+
+ if (selection.getFirstElement() instanceof PolytomousKeyNode) {
+ parentNode = (PolytomousKeyNode) selection.getFirstElement();
+ } else {
+ return new Status(IStatus.ERROR,
+ "unknown",
+ PolytomousKeyEditorLabels.NO_KEY_NODE_FOR_SIBLING_SELECTED_MESSAGE);
+ }
+
+ return Status.OK_STATUS;
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.operation.RemotingCdmHandler#prepareOperation(org.eclipse.core.commands.ExecutionEvent)
+ */
+ @Override
+ public AbstractOperation prepareOperation(ExecutionEvent event) {
+ return new RemotingCreatePolytomousKeyNodeOperation(event.getTrigger(), false, parentNode.getParent());
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.operation.RemotingCdmHandler#onComplete()
+ */
+ @Override
+ public void onComplete() {
+ // TODO Auto-generated method stub
+
+ }
+
+}
/**
- *
+ *
*/
package eu.etaxonomy.taxeditor.editor.key.polytomous.operation;
PolytomousKeyNode parentNode;
private PolytomousKeyNode childNode;
-
+
public CreateNodeOperation(String label,
IUndoContext undoContext, PolytomousKeyNode parentNode, IPostOperationEnabled postOperationEnabled) {
super(label, undoContext, postOperationEnabled);
throws ExecutionException {
childNode = PolytomousKeyNode.NewInstance();
-
+
parentNode.addChild(childNode);
return postExecute(childNode);
/**
- *
+ *
*/
package eu.etaxonomy.taxeditor.editor.key.polytomous.operation;
import org.eclipse.core.runtime.IProgressMonitor;
import org.eclipse.core.runtime.IStatus;
import org.eclipse.jface.dialogs.MessageDialog;
-import org.eclipse.ui.handlers.HandlerUtil;
import eu.etaxonomy.cdm.api.application.ICdmApplicationConfiguration;
import eu.etaxonomy.cdm.api.service.DeleteResult;
import eu.etaxonomy.cdm.api.service.IPolytomousKeyNodeService;
-import eu.etaxonomy.cdm.api.service.ITaxonService;
import eu.etaxonomy.cdm.model.description.PolytomousKeyNode;
import eu.etaxonomy.taxeditor.bulkeditor.internal.TaxeditorBulkeditorPlugin;
import eu.etaxonomy.taxeditor.model.MessagingUtils;
/**
* @author n.hoffmann
- *
+ *
*/
public class DeleteNodeOperation extends AbstractPostTaxonOperation {
/*
* (non-Javadoc)
- *
+ *
* @see
* org.eclipse.core.commands.operations.AbstractOperation#execute(org.eclipse
* .core.runtime.IProgressMonitor, org.eclipse.core.runtime.IAdaptable)
@Override
public IStatus execute(IProgressMonitor monitor, IAdaptable info)
throws ExecutionException {
-
+
//parent.removeChild(node);
ICdmApplicationConfiguration controller;
-
- controller = (ICdmApplicationConfiguration) CdmStore.getCurrentApplicationConfiguration();
-
+
+ controller = CdmStore.getCurrentApplicationConfiguration();
+
IPolytomousKeyNodeService service = controller.getPolytomousKeyNodeService();
DeleteResult result;
if (node.getChildren().size()>0){
/*
* (non-Javadoc)
- *
+ *
* @see
* org.eclipse.core.commands.operations.AbstractOperation#redo(org.eclipse
* .core.runtime.IProgressMonitor, org.eclipse.core.runtime.IAdaptable)
/*
* (non-Javadoc)
- *
+ *
* @see
* org.eclipse.core.commands.operations.AbstractOperation#undo(org.eclipse
* .core.runtime.IProgressMonitor, org.eclipse.core.runtime.IAdaptable)
--- /dev/null
+// $Id$
+/**
+* Copyright (C) 2015 EDIT
+* European Distributed Institute of Taxonomy
+* http://www.e-taxonomy.eu
+*
+* The contents of this file are subject to the Mozilla Public License Version 1.1
+* See LICENSE.TXT at the top of this package for the full license terms.
+*/
+package eu.etaxonomy.taxeditor.editor.key.polytomous.operation;
+
+import org.eclipse.core.runtime.IAdaptable;
+import org.eclipse.core.runtime.IProgressMonitor;
+
+import eu.etaxonomy.cdm.api.application.CdmChangeEvent.Action;
+import eu.etaxonomy.cdm.model.common.CdmBase;
+import eu.etaxonomy.cdm.model.description.PolytomousKeyNode;
+import eu.etaxonomy.taxeditor.operation.RemotingCdmDefaultOperation;
+
+/**
+ * @author cmathew
+ * @date 21 Jul 2015
+ *
+ */
+public class RemotingCreatePolytomousKeyNodeOperation extends RemotingCdmDefaultOperation {
+
+ private final PolytomousKeyNode parentNode;
+
+ private final static String LABEL = "Create new polytomous key node";
+
+ public RemotingCreatePolytomousKeyNodeOperation(Object source,
+ boolean async,
+ PolytomousKeyNode parentNode){
+ super(LABEL, Action.Create, source, async);
+ this.parentNode = parentNode;
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.operation.RemotingCdmSimpleOperation#doSimpleExecute(org.eclipse.core.runtime.IProgressMonitor, org.eclipse.core.runtime.IAdaptable)
+ */
+ @Override
+ protected CdmBase doSimpleExecute(IProgressMonitor monitor, IAdaptable info) throws Exception {
+ PolytomousKeyNode childNode = PolytomousKeyNode.NewInstance();
+ parentNode.addChild(childNode);
+ return childNode;
+ }
+
+}
import eu.etaxonomy.cdm.api.conversation.ConversationHolder;
import eu.etaxonomy.cdm.api.conversation.IConversationEnabled;
-import eu.etaxonomy.cdm.api.service.ITaxonService;
import eu.etaxonomy.cdm.hibernate.HibernateProxyHelper;
import eu.etaxonomy.cdm.model.common.CdmBase;
import eu.etaxonomy.cdm.model.name.HomotypicalGroup;
import eu.etaxonomy.cdm.model.taxon.TaxonNode;
import eu.etaxonomy.cdm.persistence.hibernate.CdmDataChangeMap;
import eu.etaxonomy.taxeditor.editor.CdmDataTransfer;
-import eu.etaxonomy.taxeditor.editor.EditorUtil;
import eu.etaxonomy.taxeditor.editor.IDropTargetable;
import eu.etaxonomy.taxeditor.editor.IMultiPageTaxonEditorPage;
import eu.etaxonomy.taxeditor.editor.ISecuredEditor;
import eu.etaxonomy.taxeditor.model.TaxeditorPartService;
import eu.etaxonomy.taxeditor.preference.Resources;
import eu.etaxonomy.taxeditor.security.RequiredPermissions;
+import eu.etaxonomy.taxeditor.session.ICdmEntitySession;
import eu.etaxonomy.taxeditor.store.CdmStore;
-import eu.etaxonomy.taxeditor.store.StoreUtil;
/**
* <p>
private TaxonBase objectAffectedByLastOperation;
+ private ICdmEntitySession cdmEntitySession;
+
/**
* <p>
* Constructor for TaxonNameEditor.
* </p>
*/
public void createOrUpdateNameComposites() {
- //this.taxon = (Taxon)CdmStore.getService(ITaxonService.class).load(this.getTaxon().getUuid());
- //this.taxon = HibernateProxyHelper.deproxy(this.taxon, Taxon.class);
+// this.taxon = (Taxon)CdmStore.getService(ITaxonService.class).load(this.getTaxon().getUuid());
ContainerFactory.createOrUpdateAcceptedTaxonsHomotypicGroup(this);
ContainerFactory.createOrUpdateHeterotypicSynonymyGroups(this);
ContainerFactory.createOrUpdateMisapplicationsGroup(this);
}
if (input.getAdapter(Taxon.class) != null) {
- taxon = (Taxon) input.getAdapter(Taxon.class);
+ taxon = CdmBase.deproxy(input.getAdapter(Taxon.class), Taxon.class);
} else {
throw new PartInitException("Invalid Input: Taxon cannot be null");
}
Color background = AbstractUtility.getColor(enabled ? Resources.COLOR_COMPOSITE_BACKGROUND : Resources.COLOR_TEXT_DISABLED_BACKGROUND);
setEnabled(enabled, background);
}
+
+
+
}
// $Id$
/**
* Copyright (C) 2007 EDIT
-* European Distributed Institute of Taxonomy
+* European Distributed Institute of Taxonomy
* http://www.e-taxonomy.eu
-*
+*
* The contents of this file are subject to the Mozilla Public License Version 1.1
* See LICENSE.TXT at the top of this package for the full license terms.
*/
import eu.etaxonomy.taxeditor.model.MessagingUtils;
import eu.etaxonomy.taxeditor.operation.AbstractPostOperation;
import eu.etaxonomy.taxeditor.operation.IPostOperationEnabled;
+import eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled;
import eu.etaxonomy.taxeditor.ui.dialog.selection.TaxonNodeSelectionDialog;
/**
private static final Logger logger = Logger
.getLogger(ChangeSynonymToAcceptedTaxonHandler.class);
private MultiPageTaxonEditor editor;
-
+
/* (non-Javadoc)
* @see org.eclipse.core.commands.IHandler#execute(org.eclipse.core.commands.ExecutionEvent)
*/
/** {@inheritDoc} */
- public Object execute(ExecutionEvent event) throws ExecutionException {
+ @Override
+ public Object execute(ExecutionEvent event) throws ExecutionException {
editor = (MultiPageTaxonEditor) HandlerUtil.getActiveEditor(event);
Shell shell = HandlerUtil.getActiveShell(event);
IEditorInput input = editor.getEditorInput();
-
+
if (!(input instanceof TaxonEditorInput)) {
logger.error("Editor input is not TaxonEditorInput");
return null;
}
Synonym synonym = (Synonym) selection.getFirstElement();
-
+
// Force user to save taxon - not really necessary though, is it?
if (!EditorUtil.forceUserSave(editor, shell)) {
return null;
// Get taxon
Taxon taxon = ((TaxonEditorInput) input).getTaxon();
-
+
TaxonNode parentNode = (TaxonNode) HibernateProxyHelper.deproxy(((TaxonEditorInput) input).getTaxonNode().getParent());
-
+
List<UUID> excludeTaxa = null;
-
- TaxonNode newParentNode = TaxonNodeSelectionDialog.select(HandlerUtil.getActiveShell(event), editor.getConversationHolder(), "Select parent", excludeTaxa, null, null);
-
+
+ TaxonNode newParentNode = TaxonNodeSelectionDialog.select(HandlerUtil.getActiveShell(event), editor.getConversationHolder(), "Select parent", excludeTaxa, null, ((TaxonEditorInput) input).getTaxonNode().getClassification());
+
+
if(newParentNode != null){
-
+
// TODO get synonyms from homotypical group and add them as homotypic synonyms to new accepted taxon
// apply confirmation dialog
HomotypicalGroup group = synonym.getHomotypicGroup();
Set<TaxonNameBase> namesInGroup = group.getTypifiedNames();
// FIXME with this implementation we can not create a taxonNode that is a direct child of the classification node
- AbstractPostOperation operation = new ChangeSynonymToAcceptedTaxonOperation("Change synonym to accepted taxon", EditorUtil.getUndoContext(),
- taxon, newParentNode, synonym, namesInGroup, this, editor); //$NON-NLS-1$
+ AbstractPostOperation operation = new ChangeSynonymToAcceptedTaxonOperation("Change synonym to accepted taxon", EditorUtil.getUndoContext(),
+ taxon, newParentNode, synonym, namesInGroup, this, editor, (ICdmEntitySessionEnabled)editor.getEditorInput()); //$NON-NLS-1$
+
EditorUtil.executeOperation(operation);
}
-
+
return null;
}
* @see eu.etaxonomy.taxeditor.operations.IPostOperationEnabled#postOperation(eu.etaxonomy.cdm.model.common.CdmBase)
*/
/** {@inheritDoc} */
- public boolean postOperation(CdmBase objectAffectedByOperation) {
-
+ @Override
+ public boolean postOperation(CdmBase objectAffectedByOperation) {
+
// Redraw existing editor
((IPostOperationEnabled) editor).postOperation(null);
-
+
editor.doSave(EditorUtil.getMonitor());
-
+
if (objectAffectedByOperation instanceof TaxonNode) {
-
+
// Open new unsaved editor with existing taxon's parent as temporary parent
TaxonNode newNode = (TaxonNode) objectAffectedByOperation;
// TaxonNode newNode = parentNode.addChild(newTaxon);
-
+
try {
// TODO
/*
* doesn't work yet.
*/
EditorUtil.openTaxonNode(newNode.getUuid());
-
+
} catch (PartInitException e) {
// TODO Auto-generated catch block
e.printStackTrace();
*
* @return a boolean.
*/
- public boolean onComplete() {
+ @Override
+ public boolean onComplete() {
// TODO Auto-generated method stub
return false;
}
/**
* Copyright (C) 2007 EDIT
-* European Distributed Institute of Taxonomy
+* European Distributed Institute of Taxonomy
* http://www.e-taxonomy.eu
-*
+*
* The contents of this file are subject to the Mozilla Public License Version 1.1
* See LICENSE.TXT at the top of this package for the full license terms.
*/
import org.eclipse.core.commands.common.NotDefinedException;
import eu.etaxonomy.cdm.model.name.HomotypicalGroup;
-import eu.etaxonomy.cdm.model.name.TaxonNameBase;
+import eu.etaxonomy.cdm.model.name.NonViralName;
import eu.etaxonomy.cdm.model.taxon.Taxon;
import eu.etaxonomy.taxeditor.editor.EditorUtil;
import eu.etaxonomy.taxeditor.editor.Page;
* @see org.eclipse.core.commands.IHandler#execute(org.eclipse.core.commands.ExecutionEvent)
*/
/** {@inheritDoc} */
- public Object execute(ExecutionEvent event) throws ExecutionException {
+ @Override
+ public Object execute(ExecutionEvent event) throws ExecutionException {
TaxonNameEditor editor = (TaxonNameEditor) EditorUtil.getActiveEditorPage(
Page.NAME);
Taxon taxon = editor.getTaxon();
HomotypicalGroup group = taxon.getHomotypicGroup();
- TaxonNameBase newSynonymName = ParseHandler.createEmptyName();
-
+ NonViralName newSynonymName = ParseHandler.createEmptyName();
+
AbstractPostOperation operation;
try {
- operation = new CreateSynonymInExistingHomotypicalGroupOperation(event.getCommand().getName(),
+ operation = new CreateSynonymInExistingHomotypicalGroupOperation(event.getCommand().getName(),
editor.getUndoContext(), taxon, group, newSynonymName, editor);
EditorUtil.executeOperation(operation);
} catch (NotDefinedException e) {
MessagingUtils.error(getClass(), e);
}
-
+
return null;
}
// $Id$
/**
* Copyright (C) 2007 EDIT
-* European Distributed Institute of Taxonomy
+* European Distributed Institute of Taxonomy
* http://www.e-taxonomy.eu
-*
+*
* The contents of this file are subject to the Mozilla Public License Version 1.1
* See LICENSE.TXT at the top of this package for the full license terms.
*/
import org.eclipse.ui.handlers.HandlerUtil;
import eu.etaxonomy.cdm.model.name.HomotypicalGroup;
-import eu.etaxonomy.cdm.model.name.TaxonNameBase;
+import eu.etaxonomy.cdm.model.name.NonViralName;
import eu.etaxonomy.cdm.model.taxon.Synonym;
import eu.etaxonomy.taxeditor.editor.EditorUtil;
import eu.etaxonomy.taxeditor.editor.Page;
* @see org.eclipse.core.commands.IHandler#execute(org.eclipse.core.commands.ExecutionEvent)
*/
/** {@inheritDoc} */
- public Object execute(ExecutionEvent event) throws ExecutionException {
+ @Override
+ public Object execute(ExecutionEvent event) throws ExecutionException {
TaxonNameEditor editor = (TaxonNameEditor) EditorUtil.getActiveEditorPage(
Page.NAME);
ISelection menuSelection = HandlerUtil.getCurrentSelection(event);
-
+
Object selecteObject = ((StructuredSelection) menuSelection).getFirstElement();
-
+
if(! (selecteObject instanceof Synonym)){
return null;
}
-
-
+
+
Synonym synonym = (Synonym) selecteObject;
-
+
HomotypicalGroup group = synonym.getHomotypicGroup();
-
- TaxonNameBase newSynonymName = ParseHandler.createEmptyName();
-
+
+ NonViralName newSynonymName = ParseHandler.createEmptyName();
+
AbstractPostOperation operation;
-
+
try {
operation = new CreateSynonymInExistingHomotypicalGroupOperation(event.getCommand().getName(), editor.getUndoContext(),
editor.getTaxon(), group, newSynonymName, editor);
} catch (NotDefinedException e) {
logger.warn("Command name not set");
}
-
+
return null;
}
}
import eu.etaxonomy.cdm.model.taxon.Synonym;
import eu.etaxonomy.cdm.model.taxon.Taxon;
import eu.etaxonomy.taxeditor.editor.EditorUtil;
+import eu.etaxonomy.taxeditor.editor.Messages;
import eu.etaxonomy.taxeditor.editor.Page;
import eu.etaxonomy.taxeditor.editor.name.TaxonNameEditor;
import eu.etaxonomy.taxeditor.editor.name.operation.DeleteMisapplicationOperation;
import eu.etaxonomy.taxeditor.model.MessagingUtils;
import eu.etaxonomy.taxeditor.operation.AbstractPostOperation;
import eu.etaxonomy.taxeditor.operation.IPostOperationEnabled;
+import eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled;
/**
- * <p>DeleteTaxonBaseHandler class.</p>
- *
* @author n.hoffmann
* @created 21.04.2009
* @version 1.0
public class DeleteTaxonBaseHandler extends AbstractHandler implements IHandler, IPostOperationEnabled {
TaxonNameEditor editor;
- /* (non-Javadoc)
- * @see org.eclipse.core.commands.IHandler#execute(org.eclipse.core.commands.ExecutionEvent)
- */
/** {@inheritDoc} */
@Override
public Object execute(ExecutionEvent event) throws ExecutionException {
return null;
}
- /**
- * @param editor
- * @param selectedElement
- * @param operation
- * @param commandName
- */
protected void doExecute(ExecutionEvent event, TaxonNameEditor editor, Object selectedElement) {
AbstractPostOperation operation = null;
String commandName = null;
}
else if (selectedElement instanceof Taxon){
//TODO: how to get the actual classification
- if(! MessageDialog.openConfirm(HandlerUtil.getActiveShell(event), "Confirm Deletion", "Are you sure you want to delete the selected taxon?")){
+ if(! MessageDialog.openConfirm(HandlerUtil.getActiveShell(event), Messages.DeleteTaxonBaseHandler_CONFIRM_DELETION, Messages.DeleteTaxonBaseHandler_REALLY_DELETE_TAXON)){
return ;
}
IWorkbenchPage activePage = HandlerUtil.getActiveWorkbenchWindow(event).getActivePage();
- operation = new DeleteTaxonOperation(commandName, editor.getUndoContext(),(Taxon) selectedElement, new TaxonDeletionConfigurator(), null, activePage, this, editor);
+ operation = new DeleteTaxonOperation(commandName,
+ editor.getUndoContext(),
+ (Taxon) selectedElement,
+ new TaxonDeletionConfigurator(),
+ null,
+ activePage,
+ this,
+ editor,
+ (ICdmEntitySessionEnabled)editor.getEditorInput());
//editor.dispose();
}
else {
- throw new IllegalArgumentException("Element has to be Synonym, Misapplication or Concept");
+ throw new IllegalArgumentException(Messages.DeleteTaxonBaseHandler_ELEMENT_MUST_BE_SYNONYM_MISAPP_CONCEPT);
}
AbstractUtility.executeOperation(operation);
-package eu.etaxonomy.taxeditor.editor.name.handler;\r
-\r
-import java.util.UUID;\r
-\r
-import org.apache.log4j.Logger;\r
-import org.eclipse.core.commands.AbstractHandler;\r
-import org.eclipse.core.commands.ExecutionEvent;\r
-import org.eclipse.core.commands.ExecutionException;\r
-import org.eclipse.core.commands.common.NotDefinedException;\r
-import org.eclipse.core.commands.operations.IUndoContext;\r
-import org.eclipse.jface.dialogs.MessageDialog;\r
-import org.eclipse.jface.viewers.StructuredSelection;\r
-import org.eclipse.swt.widgets.Shell;\r
-import org.eclipse.ui.IEditorInput;\r
-import org.eclipse.ui.handlers.HandlerUtil;\r
-\r
-import eu.etaxonomy.cdm.model.common.CdmBase;\r
-import eu.etaxonomy.cdm.model.name.TaxonNameBase;\r
-import eu.etaxonomy.cdm.model.taxon.Synonym;\r
-import eu.etaxonomy.cdm.model.taxon.Taxon;\r
-import eu.etaxonomy.cdm.model.taxon.TaxonNode;\r
-import eu.etaxonomy.taxeditor.editor.EditorUtil;\r
-import eu.etaxonomy.taxeditor.editor.MultiPageTaxonEditor;\r
-import eu.etaxonomy.taxeditor.editor.TaxonEditorInput;\r
-import eu.etaxonomy.taxeditor.editor.name.operation.MoveSynonymToAnotherAcceptedTaxonOperation;\r
-import eu.etaxonomy.taxeditor.operation.IPostOperationEnabled;\r
-import eu.etaxonomy.taxeditor.ui.dialog.selection.TaxonNodeSelectionDialog;\r
-\r
-public class MoveSynonymToAnotherAcceptedTaxonHandler extends AbstractHandler implements IPostOperationEnabled {\r
- private static final Logger logger = Logger\r
- .getLogger(MoveSynonymToAnotherAcceptedTaxonHandler.class);\r
- private MultiPageTaxonEditor editor;\r
- \r
- @Override\r
- public Object execute(ExecutionEvent event) throws ExecutionException {\r
- editor = (MultiPageTaxonEditor) HandlerUtil.getActiveEditor(event);\r
- Shell shell = HandlerUtil.getActiveShell(event);\r
- IEditorInput input = editor.getEditorInput();\r
- if (!EditorUtil.forceUserSave(editor, shell)) {\r
- return null;\r
- }\r
- \r
- if (!(input instanceof TaxonEditorInput)) {\r
- logger.error("Editor input is not TaxonEditorInput");\r
- return null;\r
- }\r
-\r
- // Get synonym from selection\r
- StructuredSelection selection = (StructuredSelection) HandlerUtil.getCurrentSelection(event);\r
- if (!(selection.getFirstElement() instanceof Synonym)) {\r
- logger.error("Selection does not contain a Synonym");\r
- return null;\r
- }\r
-\r
- Synonym synonym = (Synonym) selection.getFirstElement();\r
- TaxonNode newParentNode = TaxonNodeSelectionDialog.select(HandlerUtil.getActiveShell(event), editor.getConversationHolder(), "Select new accepted taxon", null, null, null);\r
- Taxon oldParent = ((TaxonEditorInput)input).getTaxon();\r
- \r
- MoveSynonymToAnotherAcceptedTaxonOperation operation = new MoveSynonymToAnotherAcceptedTaxonOperation("Change accepted Taxon of Synonym", EditorUtil.getUndoContext(),\r
- oldParent.getUuid(), synonym.getUuid(), newParentNode.getTaxon(), editor);\r
- \r
- EditorUtil.executeOperation(operation);\r
- \r
-\r
- return null;\r
- }\r
-\r
- @Override\r
- public boolean postOperation(CdmBase objectAffectedByOperation) {\r
- // TODO Auto-generated method stub\r
- return false;\r
- }\r
-\r
- @Override\r
- public boolean onComplete() {\r
- // TODO Auto-generated method stub\r
- return false;\r
- }\r
- \r
- \r
-\r
-}\r
+package eu.etaxonomy.taxeditor.editor.name.handler;
+
+import org.apache.log4j.Logger;
+import org.eclipse.core.commands.AbstractHandler;
+import org.eclipse.core.commands.ExecutionEvent;
+import org.eclipse.core.commands.ExecutionException;
+import org.eclipse.jface.viewers.StructuredSelection;
+import org.eclipse.swt.widgets.Shell;
+import org.eclipse.ui.IEditorInput;
+import org.eclipse.ui.handlers.HandlerUtil;
+
+import eu.etaxonomy.cdm.model.common.CdmBase;
+import eu.etaxonomy.cdm.model.taxon.Synonym;
+import eu.etaxonomy.cdm.model.taxon.Taxon;
+import eu.etaxonomy.cdm.model.taxon.TaxonNode;
+import eu.etaxonomy.taxeditor.editor.EditorUtil;
+import eu.etaxonomy.taxeditor.editor.MultiPageTaxonEditor;
+import eu.etaxonomy.taxeditor.editor.TaxonEditorInput;
+import eu.etaxonomy.taxeditor.editor.name.operation.MoveSynonymToAnotherAcceptedTaxonOperation;
+import eu.etaxonomy.taxeditor.model.AbstractUtility;
+import eu.etaxonomy.taxeditor.operation.IPostOperationEnabled;
+import eu.etaxonomy.taxeditor.ui.dialog.selection.TaxonNodeSelectionDialog;
+
+public class MoveSynonymToAnotherAcceptedTaxonHandler extends AbstractHandler implements IPostOperationEnabled {
+ private static final Logger logger = Logger
+ .getLogger(MoveSynonymToAnotherAcceptedTaxonHandler.class);
+ private MultiPageTaxonEditor editor;
+
+ @Override
+ public Object execute(ExecutionEvent event) throws ExecutionException {
+ editor = (MultiPageTaxonEditor) HandlerUtil.getActiveEditor(event);
+ Shell shell = HandlerUtil.getActiveShell(event);
+ IEditorInput input = editor.getEditorInput();
+ if (!EditorUtil.forceUserSave(editor, shell)) {
+ return null;
+ }
+
+ if (!(input instanceof TaxonEditorInput)) {
+ logger.error("Editor input is not TaxonEditorInput");
+ return null;
+ }
+
+ // Get synonym from selection
+ StructuredSelection selection = (StructuredSelection) HandlerUtil.getCurrentSelection(event);
+ if (!(selection.getFirstElement() instanceof Synonym)) {
+ logger.error("Selection does not contain a Synonym");
+ return null;
+ }
+
+ Synonym synonym = (Synonym) selection.getFirstElement();
+ TaxonNode newParentNode = TaxonNodeSelectionDialog.select(HandlerUtil.getActiveShell(event), editor.getConversationHolder(), "Select new accepted taxon", null, null, ((TaxonEditorInput)input).getTaxonNode().getClassification());
+ if(newParentNode!=null){
+ Taxon oldParent = ((TaxonEditorInput)input).getTaxon();
+
+ MoveSynonymToAnotherAcceptedTaxonOperation operation = new MoveSynonymToAnotherAcceptedTaxonOperation("Change accepted Taxon of Synonym", EditorUtil.getUndoContext(),
+ oldParent.getUuid(), synonym.getUuid(), newParentNode.getTaxon(), editor);
+
+ AbstractUtility.executeOperation(operation);
+
+ }
+ return null;
+ }
+
+ @Override
+ public boolean postOperation(CdmBase objectAffectedByOperation) {
+ // TODO Auto-generated method stub
+ return false;
+ }
+
+ @Override
+ public boolean onComplete() {
+ // TODO Auto-generated method stub
+ return false;
+ }
+
+
+
+}
// $Id$
/**
* Copyright (C) 2007 EDIT
-* European Distributed Institute of Taxonomy
+* European Distributed Institute of Taxonomy
* http://www.e-taxonomy.eu
-*
+*
* The contents of this file are subject to the Mozilla Public License Version 1.1
* See LICENSE.TXT at the top of this package for the full license terms.
*/
import eu.etaxonomy.taxeditor.editor.name.operation.SwapSynonymAndAcceptedOperation;
import eu.etaxonomy.taxeditor.model.MessagingUtils;
import eu.etaxonomy.taxeditor.operation.IPostOperationEnabled;
+import eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled;
/**
* <p>SwapSynonymAndAcceptedHandler class.</p>
* @see org.eclipse.core.commands.IHandler#execute(org.eclipse.core.commands.ExecutionEvent)
*/
/** {@inheritDoc} */
- public Object execute(ExecutionEvent event) throws ExecutionException {
+ @Override
+ public Object execute(ExecutionEvent event) throws ExecutionException {
editor = EditorUtil.getActiveMultiPageTaxonEditor();
Shell shell = HandlerUtil.getActiveShell(event);
Synonym synonym = (Synonym) EditorUtil.getSelection(event).getFirstElement();
-
+
// Force user to save taxon - not really necessary though, is it?
if (!EditorUtil.forceUserSave(editor, shell)) {
return null;
}
-
+
try {
- SwapSynonymAndAcceptedOperation operation = new SwapSynonymAndAcceptedOperation(event.getCommand().getName(), editor.getUndoContext(),
- editor.getTaxon(), synonym, this);
-
+ SwapSynonymAndAcceptedOperation operation = new SwapSynonymAndAcceptedOperation(event.getCommand().getName(),
+ editor.getUndoContext(),
+ editor.getTaxon(),
+ synonym,
+ this,
+ (ICdmEntitySessionEnabled)editor.getEditorInput());
+
EditorUtil.executeOperation(operation);
-
+
} catch (NotDefinedException e) {
logger.warn("Command name not set");
- }
+ }
return null;
}
public boolean postOperation(CdmBase objectAffectedByOperation) {
// Redraw existing editor
//((IPostOperationEnabled) editor).postOperation(null);
-
+
editor.doSave(EditorUtil.getMonitor());
editor.close(true);
-
+
if (objectAffectedByOperation instanceof Taxon) {
-
+
taxon = (Taxon) objectAffectedByOperation;
-
-
+
+
}
return true;
}
public boolean onComplete() {
Display display = Display.getCurrent();
display.asyncExec(new Runnable() {
- public void run() {
+ @Override
+ public void run() {
try {
EditorUtil.openTaxonBase(taxon.getUuid());
-
+
} catch (Exception e) {
MessagingUtils.warningDialog("Could not open editor for taxon", this, e.getMessage());
}
-
+
}
});
return true;
import eu.etaxonomy.cdm.api.service.exception.DataChangeNoRollbackException;
import eu.etaxonomy.cdm.model.name.HomotypicalGroup;
import eu.etaxonomy.cdm.model.name.TaxonNameBase;
+import eu.etaxonomy.cdm.model.taxon.Synonym;
import eu.etaxonomy.cdm.model.taxon.SynonymRelationship;
import eu.etaxonomy.cdm.model.taxon.Taxon;
-import eu.etaxonomy.cdm.model.taxon.Synonym;
import eu.etaxonomy.cdm.model.taxon.TaxonRelationship;
import eu.etaxonomy.cdm.model.taxon.TaxonRelationshipType;
import eu.etaxonomy.taxeditor.model.MessagingUtils;
TaxonNameBase<?, ?> synonymName = concept.getName();
Synonym synonym = null;
try {
- synonym = CdmStore.getService(ITaxonService.class).changeRelatedTaxonToSynonym(concept, element, taxonRelationship.getType(), null);
+ synonym =
+ (Synonym) CdmStore.getService(ITaxonService.class).changeRelatedTaxonToSynonym(concept.getUuid(),
+ element.getUuid(),
+ taxonRelationship.getType(),
+ null).getCdmEntity();
} catch (DataChangeNoRollbackException e) {
// TODO Auto-generated catch block
e.printStackTrace();
}
-
-
+
+
return postExecute(synonym);
}
/**
* Copyright (C) 2007 EDIT
-* European Distributed Institute of Taxonomy
+* European Distributed Institute of Taxonomy
* http://www.e-taxonomy.eu
-*
+*
* The contents of this file are subject to the Mozilla Public License Version 1.1
* See LICENSE.TXT at the top of this package for the full license terms.
*/
import org.eclipse.core.runtime.IAdaptable;
import org.eclipse.core.runtime.IProgressMonitor;
import org.eclipse.core.runtime.IStatus;
-import org.eclipse.core.runtime.Status;
import eu.etaxonomy.cdm.hibernate.HibernateProxyHelper;
-import eu.etaxonomy.cdm.model.common.CdmBase;
import eu.etaxonomy.cdm.model.name.HomotypicalGroup;
import eu.etaxonomy.cdm.model.name.TaxonNameBase;
import eu.etaxonomy.cdm.model.taxon.Taxon;
*/
public class ChangeHomotypicalGroupBasionymOperation extends
AbstractPostTaxonOperation {
- private TaxonBase taxonBase;
+ private final TaxonBase taxonBase;
/**
* <p>Constructor for ChangeHomotypicalGroupBasionymOperation.</p>
public ChangeHomotypicalGroupBasionymOperation(String text,
IUndoContext undoContext, Taxon taxon, TaxonBase taxonBase, IPostOperationEnabled postOperationEnabled) {
super(text, undoContext, taxon, postOperationEnabled);
-
+
this.taxonBase = taxonBase;
}
@Override
public IStatus execute(IProgressMonitor monitor, IAdaptable info)
throws ExecutionException {
-
+
TaxonNameBase<?, ?> name = taxonBase.getName();
-
+
monitor.worked(20);
name = HibernateProxyHelper.deproxy(name, TaxonNameBase.class);
HomotypicalGroup group = HibernateProxyHelper.deproxy(name.getHomotypicalGroup(), HomotypicalGroup.class);
TaxonNameBase oldBasionym = name.getBasionym();
-
+
name.setAsGroupsBasionym();
-
+
monitor.worked(40);
oldBasionym = HibernateProxyHelper.deproxy(oldBasionym, TaxonNameBase.class);
if (oldBasionym != null){
postExecute(oldBasionymTaxonBase);
}
}
+
return postExecute(taxonBase);
}
// TODO replace w method from cdmlib
// FIXME this is also old code: reimplement
// CdmUtil.setGroupBasionym(synonym.getName());
-
+
return postExecute(taxonBase);
}
-
-
+
+
}
import eu.etaxonomy.taxeditor.model.MessagingUtils;
import eu.etaxonomy.taxeditor.operation.AbstractPersistentPostOperation;
import eu.etaxonomy.taxeditor.operation.IPostOperationEnabled;
+import eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled;
import eu.etaxonomy.taxeditor.store.CdmStore;
/**
public class ChangeSynonymToAcceptedTaxonOperation extends AbstractPersistentPostOperation {
private Taxon newTaxon;
- private Synonym synonym;
+ private final Synonym synonym;
private final ITaxonTreeNode parentNode;
private TaxonNode newNode;
* @param postOperationEnabled a {@link eu.etaxonomy.taxeditor.operation.IPostOperationEnabled} object.
* @param conversationEnabled a {@link eu.etaxonomy.cdm.api.conversation.IConversationEnabled} object.
*/
- public ChangeSynonymToAcceptedTaxonOperation(String label, IUndoContext undoContext,
- Taxon taxon, ITaxonTreeNode parentNode, Synonym synonym, Set<TaxonNameBase> namesInHomotypicalGroup, IPostOperationEnabled postOperationEnabled, IConversationEnabled conversationEnabled) {
- super(label, undoContext, postOperationEnabled, conversationEnabled);
+ public ChangeSynonymToAcceptedTaxonOperation(String label,
+ IUndoContext undoContext,
+ Taxon taxon,
+ ITaxonTreeNode parentNode,
+ Synonym synonym,
+ Set<TaxonNameBase> namesInHomotypicalGroup,
+ IPostOperationEnabled postOperationEnabled,
+ IConversationEnabled conversationEnabled,
+ ICdmEntitySessionEnabled cdmEntitySessionEnabled) {
+ super(label, undoContext, postOperationEnabled, conversationEnabled, cdmEntitySessionEnabled);
this.element = taxon;
this.parentNode = parentNode;
throws ExecutionException {
try {
- newTaxon = CdmStore.getService(ITaxonService.class).changeSynonymToAcceptedTaxon(synonym, element, true, true, null, null);
+ newNode = (TaxonNode) CdmStore.getService(ITaxonService.class).changeSynonymToAcceptedTaxon(synonym.getUuid(),
+ element.getUuid(),
+ parentNode.getUuid(),
+ true,
+ true,
+ null,
+ null).getCdmEntity();
} catch (HomotypicalGroupChangeException e) {
MessagingUtils.warningDialog("Operation may lead to inconsistent data", getClass(), e.getMessage());
return postExecute(null);
}
monitor.worked(20);
+ //newTaxon = (Taxon) CdmStore.getService(ITaxonService.class).merge(newTaxon);
+ //element.removeSynonym(synonym);
- element.removeSynonym(synonym);
- newNode = parentNode.addChildTaxon(newTaxon, null, null);
/*if(namesInHomotypicGroup != null){
Taxon taxon = newNode.getTaxon();
for (TaxonNameBase synonymName : namesInHomotypicGroup){
taxon.addHomotypicSynonymName(synonymName, null, null);
-
+
}
}*/
+ //newNode = CdmStore.getService(ITaxonNodeService.class).merge(newNode);
monitor.worked(40);
import org.eclipse.core.runtime.IProgressMonitor;
import org.eclipse.core.runtime.IStatus;
-import eu.etaxonomy.cdm.api.service.ITaxonNodeService;
import eu.etaxonomy.cdm.api.service.ITaxonService;
-import eu.etaxonomy.cdm.model.name.TaxonNameBase;
import eu.etaxonomy.cdm.model.taxon.Synonym;
import eu.etaxonomy.cdm.model.taxon.SynonymRelationshipType;
import eu.etaxonomy.cdm.model.taxon.Taxon;
// add misapplied name to taxon
// TODO add microcitation for misapplied name to property sheet (if microcitation is indeed needed?!)
element.addMisappliedName(misapplication, null, null);*/
- misapplication = CdmStore.getService(ITaxonService.class).changeSynonymToRelatedTaxon(synonym, element, TaxonRelationshipType.MISAPPLIED_NAME_FOR(), null, null);
+ misapplication =
+ (Taxon) CdmStore.getService(ITaxonService.class).changeSynonymToRelatedTaxon(synonym.getUuid(),
+ element.getUuid(),
+ TaxonRelationshipType.MISAPPLIED_NAME_FOR(),
+ null,
+ null).getCdmEntity();
// redraw editor if exists
return postExecute(misapplication);
}
import org.eclipse.core.runtime.IStatus;
import eu.etaxonomy.cdm.model.name.HomotypicalGroup;
-import eu.etaxonomy.cdm.model.name.TaxonNameBase;
+import eu.etaxonomy.cdm.model.name.NonViralName;
import eu.etaxonomy.cdm.model.taxon.SynonymRelationship;
import eu.etaxonomy.cdm.model.taxon.Taxon;
import eu.etaxonomy.taxeditor.operation.AbstractPostTaxonOperation;
AbstractPostTaxonOperation {
private final HomotypicalGroup group;
- private final TaxonNameBase newSynonymName;
+ private final NonViralName newSynonymName;
private SynonymRelationship synonymRelationship;
* @param postOperationEnabled a {@link eu.etaxonomy.taxeditor.operation.IPostOperationEnabled} object.
*/
public CreateSynonymInExistingHomotypicalGroupOperation(String label,
- IUndoContext undoContext, Taxon taxon, HomotypicalGroup group, TaxonNameBase newSynonymName, IPostOperationEnabled postOperationEnabled) {
+ IUndoContext undoContext, Taxon taxon, HomotypicalGroup group, NonViralName newSynonymName, IPostOperationEnabled postOperationEnabled) {
super(label, undoContext, taxon, postOperationEnabled);
this.group = group;
this.newSynonymName = newSynonymName;
import eu.etaxonomy.cdm.api.service.config.TaxonDeletionConfigurator;
import eu.etaxonomy.cdm.model.reference.Reference;
import eu.etaxonomy.cdm.model.taxon.Taxon;
-import eu.etaxonomy.cdm.model.taxon.TaxonRelationship;
import eu.etaxonomy.cdm.model.taxon.TaxonRelationshipType;
import eu.etaxonomy.taxeditor.operation.AbstractPostTaxonOperation;
import eu.etaxonomy.taxeditor.operation.IPostOperationEnabled;
// Find misapplication relation, save citation information
- for (TaxonRelationship relationship : element.getTaxonRelations()) {
- if (relationship.getType().equals(TaxonRelationshipType.MISAPPLIED_NAME_FOR())
- && relationship.getFromTaxon().equals(misapplication)) {
- citation = relationship.getCitation();
- microcitation = relationship.getCitationMicroReference();
- }
- }
+// for (TaxonRelationship relationship : element.getTaxonRelations()) {
+// if (relationship.getType().equals(TaxonRelationshipType.MISAPPLIED_NAME_FOR())
+// && relationship.getFromTaxon().equals(misapplication)) {
+// citation = relationship.getCitation();
+// microcitation = relationship.getCitationMicroReference();
+// }
+// }
monitor.worked(20);
// Remove misapplied name relation from taxon
element.removeTaxon(misapplication, TaxonRelationshipType.MISAPPLIED_NAME_FOR());
ICdmApplicationConfiguration controller;
- controller = (ICdmApplicationConfiguration) CdmStore.getCurrentApplicationConfiguration();
+ controller = CdmStore.getCurrentApplicationConfiguration();
ITaxonService service = controller.getTaxonService();
TaxonDeletionConfigurator config = new TaxonDeletionConfigurator();
import org.eclipse.core.runtime.IAdaptable;
import org.eclipse.core.runtime.IProgressMonitor;
import org.eclipse.core.runtime.IStatus;
-import org.eclipse.jface.dialogs.MessageDialog;
import eu.etaxonomy.cdm.api.application.ICdmApplicationConfiguration;
import eu.etaxonomy.cdm.api.service.DeleteResult;
import eu.etaxonomy.cdm.model.taxon.Synonym;
import eu.etaxonomy.cdm.model.taxon.SynonymRelationshipType;
import eu.etaxonomy.cdm.model.taxon.Taxon;
+import eu.etaxonomy.taxeditor.editor.internal.TaxeditorEditorPlugin;
+import eu.etaxonomy.taxeditor.model.DeleteResultMessagingUtils;
import eu.etaxonomy.taxeditor.operation.AbstractPostTaxonOperation;
import eu.etaxonomy.taxeditor.operation.IPostOperationEnabled;
import eu.etaxonomy.taxeditor.store.CdmStore;
ICdmApplicationConfiguration controller;
- controller = (ICdmApplicationConfiguration) CdmStore.getCurrentApplicationConfiguration();
+ controller = CdmStore.getCurrentApplicationConfiguration();
ITaxonService service = controller.getTaxonService();
if (synonym.getId() == 0){
element.removeSynonym(synonym);
} else {
-
- DeleteResult result = service.deleteSynonym(synonym, null);
+//TODO: this should be moved to the handler, the operations should not contain ui code
+ DeleteResult result = service.deleteSynonym(synonym.getUuid(), element.getUuid(), null);
if (result.isError()){
- MessageDialog.openError(null, "Delete failed", result.toString());
+ DeleteResultMessagingUtils.messageDialogWithDetails(result, "Delete failed", TaxeditorEditorPlugin.PLUGIN_ID);
} else if (!result.getUpdatedObjects().isEmpty()){
- MessageDialog.openInformation(null, "Delete successfull", "The Synonym could be deleted, but there is an updated object: " + result.toString());
+ DeleteResultMessagingUtils.messageDialogWithDetails(result, "The Synonym could be deleted, but related object(s) could not be deleted", TaxeditorEditorPlugin.PLUGIN_ID);
}
}
// taxon.removeSynonym(synonym);
import eu.etaxonomy.cdm.api.service.config.TaxonDeletionConfigurator;\r
import eu.etaxonomy.taxeditor.operation.AbstractPersistentPostOperation;\r
import eu.etaxonomy.taxeditor.operation.IPostOperationEnabled;\r
+import eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled;\r
\r
public class DeleteTaxonBaseOperation extends AbstractPersistentPostOperation {\r
\r
protected TaxonDeletionConfigurator configurator;\r
\r
- public DeleteTaxonBaseOperation(String label, IUndoContext undoContext,\r
- TaxonDeletionConfigurator configurator, IWorkbenchPage activePage, IPostOperationEnabled postOperationEnabled, IConversationEnabled conversationEnabled) {\r
- super(label, undoContext, postOperationEnabled,\r
- conversationEnabled);\r
+ public DeleteTaxonBaseOperation(String label,\r
+ IUndoContext undoContext,\r
+ TaxonDeletionConfigurator configurator,\r
+ IWorkbenchPage activePage,\r
+ IPostOperationEnabled postOperationEnabled,\r
+ IConversationEnabled conversationEnabled,\r
+ ICdmEntitySessionEnabled cdmEntitySessionEnabled) {\r
+ super(label, undoContext, postOperationEnabled, conversationEnabled, cdmEntitySessionEnabled);\r
this.configurator = configurator;\r
\r
}\r
import org.eclipse.core.runtime.IAdaptable;\r
import org.eclipse.core.runtime.IProgressMonitor;\r
import org.eclipse.core.runtime.IStatus;\r
-import org.eclipse.jface.dialogs.MessageDialog;\r
import org.eclipse.ui.IWorkbenchPage;\r
\r
import eu.etaxonomy.cdm.api.application.ICdmApplicationConfiguration;\r
import eu.etaxonomy.cdm.model.taxon.Classification;\r
import eu.etaxonomy.cdm.model.taxon.Taxon;\r
import eu.etaxonomy.cdm.model.taxon.TaxonNode;\r
-import eu.etaxonomy.taxeditor.model.MessagingUtils;\r
+import eu.etaxonomy.taxeditor.editor.internal.TaxeditorEditorPlugin;\r
+import eu.etaxonomy.taxeditor.model.DeleteResultMessagingUtils;\r
import eu.etaxonomy.taxeditor.operation.IPostOperationEnabled;\r
+import eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled;\r
import eu.etaxonomy.taxeditor.store.CdmStore;\r
\r
public class DeleteTaxonOperation extends DeleteTaxonBaseOperation{\r
\r
private final Classification classification;\r
\r
- public DeleteTaxonOperation(String label, IUndoContext undoContext,\r
- Taxon taxon, TaxonDeletionConfigurator configurator, Classification classification, IWorkbenchPage activePage, IPostOperationEnabled postOperationEnabled, IConversationEnabled conversationEnabled) {\r
- super(label, undoContext, configurator, activePage, postOperationEnabled, conversationEnabled);\r
+ public DeleteTaxonOperation(String label,\r
+ IUndoContext undoContext,\r
+ Taxon taxon,\r
+ TaxonDeletionConfigurator configurator,\r
+ Classification classification,\r
+ IWorkbenchPage activePage,\r
+ IPostOperationEnabled postOperationEnabled,\r
+ IConversationEnabled conversationEnabled,\r
+ ICdmEntitySessionEnabled cdmEntitySessionEnabled) {\r
+ super(label, undoContext, configurator, activePage, postOperationEnabled, conversationEnabled, cdmEntitySessionEnabled);\r
this.element = taxon;\r
\r
Set<TaxonNode> nodes = taxon.getTaxonNodes();\r
\r
ITaxonService service = controller.getTaxonService();\r
\r
-\r
DeleteResult result = service.deleteTaxon(element.getUuid(), configurator, classification.getUuid());\r
+
if (result.isError()){\r
- MessageDialog.openError(null, "Delete failed", result.toString());\r
+ DeleteResultMessagingUtils.messageDialogWithDetails(result, "Delete failed", TaxeditorEditorPlugin.PLUGIN_ID);\r
} else if (!result.getUpdatedObjects().isEmpty()){\r
- MessagingUtils.informationDialog("Delete successfull", result.toString());\r
+ DeleteResultMessagingUtils.messageDialogWithDetails(result, "The Taxon was deleted, but related object(s) could not be deleted", TaxeditorEditorPlugin.PLUGIN_ID);\r
}\r
\r
monitor.worked(40);\r
\r
import eu.etaxonomy.cdm.api.service.ITaxonService;\r
import eu.etaxonomy.cdm.api.service.exception.HomotypicalGroupChangeException;\r
-import eu.etaxonomy.cdm.hibernate.HibernateProxyHelper;\r
-import eu.etaxonomy.cdm.model.name.HomotypicalGroup;\r
import eu.etaxonomy.cdm.model.name.TaxonNameBase;\r
import eu.etaxonomy.cdm.model.taxon.Synonym;\r
import eu.etaxonomy.cdm.model.taxon.SynonymRelationship;\r
-import eu.etaxonomy.cdm.model.taxon.SynonymRelationshipType;\r
import eu.etaxonomy.cdm.model.taxon.Taxon;\r
import eu.etaxonomy.taxeditor.editor.EditorUtil;\r
import eu.etaxonomy.taxeditor.editor.name.TaxonNameEditor;\r
private final Synonym synonym;\r
\r
private final Taxon oldTaxon;\r
- \r
- \r
+\r
+\r
/**\r
* <p>Constructor for MoveSynonymToAnotherAcceptedTaxon.</p>\r
*\r
* @param undoContext a {@link org.eclipse.core.commands.operations.IUndoContext} object.\r
* @param taxon a {@link eu.etaxonomy.cdm.model.taxon.Taxon} object.\r
* @param synonym a {@link eu.etaxonomy.cdm.model.taxon.Synonym} object.\r
- \r
+\r
* @param postOperationEnabled a {@link eu.etaxonomy.taxeditor.operation.IPostOperationEnabled} object.\r
*/\r
public MoveSynonymToAnotherAcceptedTaxonOperation(String label, IUndoContext undoContext,\r
UUID oldTaxonUUID, UUID synonymUUID, Taxon taxon, IPostOperationEnabled postOperationEnabled) {\r
- \r
+\r
super(label, undoContext, taxon, postOperationEnabled);\r
List<String> propertyPaths = new ArrayList<String>();\r
propertyPaths.add("synonymRelations");\r
TaxonNameBase<?, ?> synonymName = synonym.getName();\r
monitor.worked(20);\r
\r
- \r
+\r
\r
// Switch groups\r
- \r
+\r
monitor.worked(40);\r
SynonymRelationship synRel = synonym.getSynonymRelations().iterator().next();\r
- \r
- \r
- \r
+\r
+\r
+\r
((TaxonNameEditor)EditorUtil.getActiveMultiPageTaxonEditor().getActiveEditor()).getConversationHolder().commit();\r
- \r
- \r
- \r
+\r
+\r
+\r
try {\r
- synRel = CdmStore.getService(ITaxonService.class).moveSynonymToAnotherTaxon(synRel, this.element, true, synRel.getType(), null, null, true);\r
+ synRel = (SynonymRelationship) CdmStore.getService(ITaxonService.class).moveSynonymToAnotherTaxon(synRel,\r
+ this.element.getUuid(),\r
+ true,\r
+ synRel.getType(),\r
+ null,\r
+ null,\r
+ true).getCdmEntity();\r
} catch (HomotypicalGroupChangeException e) {\r
// TODO Auto-generated catch block\r
e.printStackTrace();\r
}\r
((TaxonNameEditor)EditorUtil.getActiveMultiPageTaxonEditor().getActiveEditor()).getConversationHolder().commit();\r
- \r
- \r
+\r
+\r
\r
// Redraw editor if it exists\r
return postExecute(synRel.getSynonym());\r
import org.eclipse.core.runtime.IStatus;
import eu.etaxonomy.cdm.api.service.ITaxonService;
+import eu.etaxonomy.cdm.api.service.UpdateResult;
import eu.etaxonomy.cdm.model.taxon.Synonym;
import eu.etaxonomy.cdm.model.taxon.SynonymRelationshipType;
import eu.etaxonomy.cdm.model.taxon.Taxon;
import eu.etaxonomy.taxeditor.model.MessagingUtils;
import eu.etaxonomy.taxeditor.operation.AbstractPostTaxonOperation;
import eu.etaxonomy.taxeditor.operation.IPostOperationEnabled;
+import eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled;
import eu.etaxonomy.taxeditor.store.CdmStore;
/**
* @param synonym a {@link eu.etaxonomy.cdm.model.taxon.Synonym} object.
*/
public SwapSynonymAndAcceptedOperation(String label, IUndoContext undoContext,
- Taxon taxon, Synonym synonym, IPostOperationEnabled postOperationEnabled) {
- super("Swap Synonym And Accepted Taxon Operation", undoContext, taxon, postOperationEnabled);
+ Taxon taxon, Synonym synonym, IPostOperationEnabled postOperationEnabled,
+ ICdmEntitySessionEnabled cdmEntitySessionEnabled) {
+ super("Swap Synonym And Accepted Taxon Operation", undoContext, taxon, postOperationEnabled, cdmEntitySessionEnabled);
this.synonym = synonym;
}
monitor.worked(20);
- CdmStore.getService(ITaxonService.class).swapSynonymAndAcceptedTaxon(synonym, element);
+ UpdateResult result = CdmStore.getService(ITaxonService.class).swapSynonymAndAcceptedTaxon(synonym.getUuid(), element.getUuid());
monitor.worked(40);
import java.util.ArrayList;
import java.util.Arrays;
+import java.util.Collection;
import java.util.Collections;
import java.util.HashMap;
import java.util.List;
import eu.etaxonomy.cdm.api.conversation.IConversationEnabled;
import eu.etaxonomy.cdm.api.service.ITaxonNodeService;
import eu.etaxonomy.cdm.hibernate.HibernateProxyHelper;
+import eu.etaxonomy.cdm.model.common.CdmBase;
import eu.etaxonomy.cdm.model.common.DefinedTermBase;
import eu.etaxonomy.cdm.model.taxon.Classification;
import eu.etaxonomy.cdm.model.taxon.Taxon;
import eu.etaxonomy.taxeditor.model.IPartContentHasFactualData;
import eu.etaxonomy.taxeditor.preference.PreferencesUtil;
import eu.etaxonomy.taxeditor.preference.Resources;
+import eu.etaxonomy.taxeditor.session.ICdmEntitySession;
+import eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled;
import eu.etaxonomy.taxeditor.store.CdmStore;
/**
* @version 1.0
*/
public class ChecklistEditor extends EditorPart implements ISelectionListener, IPartContentHasFactualData,
- IConversationEnabled, IContextListener, IPartContentHasDetails, IDirtyMarkable {
+ IConversationEnabled, IContextListener, IPartContentHasDetails, IDirtyMarkable, ICdmEntitySessionEnabled {
private static final Logger logger = Logger.getLogger(ChecklistEditor.class);
/**
private Label statusLabel;
+ private final ICdmEntitySession cdmEntitySession;
+
private SortedSet<DefinedTermBase> terms = null;
private ToolItem toolItem;
private ChecklistDropdownSelectionListener dropListener;
* </p>
*/
public ChecklistEditor() {
+ cdmEntitySession = CdmStore.getCurrentSessionManager().newSession(this, true);
}
/** {@inheritDoc} */
/** {@inheritDoc} */
@Override
public void dispose() {
+ cdmEntitySession.dispose();
super.dispose();
}
/** {@inheritDoc} */
@Override
public void setFocus() {
+ cdmEntitySession.bind();
viewer.getControl().setFocus();
}
public boolean isDirty() {
return dirty;
}
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled#getCdmEntitySession()
+ */
+ @Override
+ public ICdmEntitySession getCdmEntitySession() {
+ // TODO Auto-generated method stub
+ return null;
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled#getRootEntities()
+ */
+ @Override
+ public <T extends CdmBase> Collection<T> getRootEntities() {
+ // TODO Auto-generated method stub
+ return null;
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled#getPropertyPathsMap()
+ */
+ @Override
+ public Map<Object, List<String>> getPropertyPathsMap() {
+ // TODO Auto-generated method stub
+ return null;
+ }
}
getViewer().refresh();
super.changed(object);
}
+
}
return layoutAlgoritm;
}
+
}
import java.util.Collection;
import org.apache.http.client.ClientProtocolException;
+import org.eclipse.core.runtime.jobs.Job;
import eu.etaxonomy.cdm.ext.occurrence.bioCase.BioCaseQueryServiceWrapper;
import eu.etaxonomy.cdm.io.common.CdmDefaultImport;
+import eu.etaxonomy.cdm.io.common.IImportConfigurator.SOURCE_TYPE;
import eu.etaxonomy.cdm.io.specimen.abcd206.in.Abcd206ImportConfigurator;
import eu.etaxonomy.cdm.model.occurrence.SpecimenOrObservationBase;
import eu.etaxonomy.taxeditor.editor.view.dataimport.transientServices.TransientCdmRepository;
//FIXME move ABCD import to cdmlib -> this will also get rid of the transient services
InputStream resultStream;
resultStream = new BioCaseQueryServiceWrapper().query(query, endPoint);
- Abcd206ImportConfigurator configurator = Abcd206ImportConfigurator.NewInstance(resultStream, null, false);
+ Abcd206ImportConfigurator configurator = Abcd206ImportConfigurator.NewInstance(null, null);
TransientCdmRepository repo =
new TransientCdmRepository(CdmStore.getCurrentApplicationConfiguration());
configurator.setCdmAppController(repo);
configurator.setAddMediaAsMediaSpecimen(true);
-
- CdmDefaultImport<Abcd206ImportConfigurator> importer = new CdmDefaultImport<Abcd206ImportConfigurator>();
- importer.invoke(configurator);
+ if(CdmStore.getCurrentSessionManager().isRemoting()) {
+ Job job = CdmStore.getImportManager().createIOServiceJob(configurator, resultStream, SOURCE_TYPE.INPUTSTREAM);
+ CdmStore.getImportManager().run(job);
+ } else {
+ configurator.setSource(resultStream);
+ CdmDefaultImport<Abcd206ImportConfigurator> importer = new CdmDefaultImport<Abcd206ImportConfigurator>();
+ importer.invoke(configurator);
+ }
results = repo.getUnits();
setResults(results);
} catch (ClientProtocolException e) {
import eu.etaxonomy.cdm.model.view.AuditEvent;
import eu.etaxonomy.cdm.model.view.AuditEventRecord;
import eu.etaxonomy.cdm.persistence.dao.common.AuditEventSort;
+import eu.etaxonomy.cdm.persistence.dto.MergeResult;
import eu.etaxonomy.cdm.persistence.dto.UuidAndTitleCache;
import eu.etaxonomy.cdm.persistence.query.Grouping;
import eu.etaxonomy.cdm.persistence.query.MatchMode;
return defaultService.merge(arg0);
}
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.cdm.api.service.IService#merge(java.util.List, boolean)
+ */
+ @Override
+ public List<MergeResult<AgentBase>> merge(List<AgentBase> arg0, boolean arg1) {
+ return defaultService.merge(arg0, arg1);
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.cdm.api.service.IService#merge(eu.etaxonomy.cdm.model.common.ICdmBase, boolean)
+ */
+ @Override
+ public MergeResult<AgentBase> merge(AgentBase arg0, boolean arg1) {
+ return defaultService.merge(arg0, arg1);
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.cdm.api.service.IService#loadWithUpdate(java.util.UUID)
+ */
+ @Override
+ public AgentBase loadWithUpdate(UUID arg0) {
+ return defaultService.loadWithUpdate(arg0);
+ }
+
+
+
}
import eu.etaxonomy.cdm.model.view.AuditEvent;
import eu.etaxonomy.cdm.model.view.AuditEventRecord;
import eu.etaxonomy.cdm.persistence.dao.common.AuditEventSort;
+import eu.etaxonomy.cdm.persistence.dto.MergeResult;
import eu.etaxonomy.cdm.persistence.dto.UuidAndTitleCache;
import eu.etaxonomy.cdm.persistence.query.Grouping;
import eu.etaxonomy.cdm.persistence.query.MatchMode;
return defaultService.merge(arg0);
}
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.cdm.api.service.IService#merge(java.util.List, boolean)
+ */
+ @Override
+ public List<MergeResult<Classification>> merge(List<Classification> arg0, boolean arg1) {
+ return defaultService.merge(arg0, arg1);
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.cdm.api.service.IService#merge(eu.etaxonomy.cdm.model.common.ICdmBase, boolean)
+ */
+ @Override
+ public MergeResult<Classification> merge(Classification arg0, boolean arg1) {
+ return defaultService.merge(arg0, arg1);
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.cdm.api.service.IService#loadWithUpdate(java.util.UUID)
+ */
+ @Override
+ public Classification loadWithUpdate(UUID arg0) {
+ return defaultService.loadWithUpdate(arg0);
+ }
}
import eu.etaxonomy.cdm.model.view.AuditEvent;
import eu.etaxonomy.cdm.model.view.AuditEventRecord;
import eu.etaxonomy.cdm.persistence.dao.common.AuditEventSort;
+import eu.etaxonomy.cdm.persistence.dto.MergeResult;
import eu.etaxonomy.cdm.persistence.dto.UuidAndTitleCache;
import eu.etaxonomy.cdm.persistence.query.Grouping;
import eu.etaxonomy.cdm.persistence.query.MatchMode;
return defaultService.merge(arg0);
}
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.cdm.api.service.IService#merge(java.util.List, boolean)
+ */
+ @Override
+ public List<MergeResult<Collection>> merge(List<Collection> arg0, boolean arg1) {
+ return defaultService.merge(arg0, arg1);
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.cdm.api.service.IService#merge(eu.etaxonomy.cdm.model.common.ICdmBase, boolean)
+ */
+ @Override
+ public MergeResult<Collection> merge(Collection arg0, boolean arg1) {
+ return defaultService.merge(arg0, arg1);
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.cdm.api.service.IService#loadWithUpdate(java.util.UUID)
+ */
+ @Override
+ public Collection loadWithUpdate(UUID arg0) {
+ return defaultService.loadWithUpdate(arg0);
+ }
+
+
}
import eu.etaxonomy.cdm.model.view.AuditEvent;
import eu.etaxonomy.cdm.model.view.AuditEventRecord;
import eu.etaxonomy.cdm.persistence.dao.common.AuditEventSort;
+import eu.etaxonomy.cdm.persistence.dto.MergeResult;
import eu.etaxonomy.cdm.persistence.dto.TermDto;
import eu.etaxonomy.cdm.persistence.dto.UuidAndTitleCache;
import eu.etaxonomy.cdm.persistence.query.Grouping;
return defaultService.moveDescriptionElementsToDescription(arg0, arg1, arg2, arg3);
}
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.cdm.api.service.IService#merge(java.util.List, boolean)
+ */
+ @Override
+ public List<MergeResult<DescriptionBase>> merge(List<DescriptionBase> arg0, boolean arg1) {
+ return defaultService.merge(arg0, arg1);
+ }
+
+
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.cdm.api.service.IService#merge(eu.etaxonomy.cdm.model.common.ICdmBase, boolean)
+ */
+ @Override
+ public MergeResult<DescriptionBase> merge(DescriptionBase arg0, boolean arg1) {
+ return defaultService.merge(arg0, arg1);
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.cdm.api.service.IService#loadWithUpdate(java.util.UUID)
+ */
+ @Override
+ public DescriptionBase loadWithUpdate(UUID arg0) {
+ return defaultService.loadWithUpdate(arg0);
+ }
+
}
import eu.etaxonomy.cdm.model.view.AuditEvent;
import eu.etaxonomy.cdm.model.view.AuditEventRecord;
import eu.etaxonomy.cdm.persistence.dao.common.AuditEventSort;
+import eu.etaxonomy.cdm.persistence.dto.MergeResult;
import eu.etaxonomy.cdm.persistence.dto.UuidAndTitleCache;
import eu.etaxonomy.cdm.persistence.query.Grouping;
import eu.etaxonomy.cdm.persistence.query.MatchMode;
public List<TaxonNameBase> merge(List<TaxonNameBase> arg0) {
return defaultService.merge(arg0);
}
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.cdm.api.service.IService#merge(java.util.List, boolean)
+ */
+ @Override
+ public List<MergeResult<TaxonNameBase>> merge(List<TaxonNameBase> arg0, boolean arg1) {
+ return defaultService.merge(arg0, arg1);
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.cdm.api.service.IService#merge(eu.etaxonomy.cdm.model.common.ICdmBase, boolean)
+ */
+ @Override
+ public MergeResult<TaxonNameBase> merge(TaxonNameBase arg0, boolean arg1) {
+ return defaultService.merge(arg0, arg1);
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.cdm.api.service.IService#loadWithUpdate(java.util.UUID)
+ */
+ @Override
+ public TaxonNameBase loadWithUpdate(UUID arg0) {
+ return defaultService.loadWithUpdate(arg0);
+ }
+
}
import eu.etaxonomy.cdm.model.view.AuditEvent;
import eu.etaxonomy.cdm.model.view.AuditEventRecord;
import eu.etaxonomy.cdm.persistence.dao.common.AuditEventSort;
+import eu.etaxonomy.cdm.persistence.dto.MergeResult;
import eu.etaxonomy.cdm.persistence.dto.UuidAndTitleCache;
import eu.etaxonomy.cdm.persistence.query.Grouping;
import eu.etaxonomy.cdm.persistence.query.MatchMode;
return defaultService.moveSequence(arg0, arg1, arg2);
}
+ @Override
+ public Pager<Media> getMediainHierarchy(SpecimenOrObservationBase arg0, Integer arg1, Integer arg2,
+ List<String> arg3) {
+ return defaultService.getMediainHierarchy(arg0, arg1, arg2, arg3);
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.cdm.api.service.IService#merge(java.util.List, boolean)
+ */
+ @Override
+ public List<MergeResult<SpecimenOrObservationBase>> merge(List<SpecimenOrObservationBase> arg0, boolean arg1) {
+ return defaultService.merge(arg0, arg1);
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.cdm.api.service.IService#merge(eu.etaxonomy.cdm.model.common.ICdmBase, boolean)
+ */
+ @Override
+ public MergeResult<SpecimenOrObservationBase> merge(SpecimenOrObservationBase arg0, boolean arg1) {
+ return defaultService.merge(arg0, arg1);
+ }
+
+ /**
+ * {@inheritDoc}
+ */
+ @Override
+ public Collection<TaxonBase<?>> listAssociatedTaxa(SpecimenOrObservationBase<?> arg0, Integer arg1, Integer arg2,
+ List<OrderHint> arg3, List<String> arg4) {
+ return defaultService.listAssociatedTaxa(arg0, arg1, arg2, arg3, arg4);
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.cdm.api.service.IService#loadWithUpdate(java.util.UUID)
+ */
+ @Override
+ public SpecimenOrObservationBase loadWithUpdate(UUID arg0) {
+ return defaultService.loadWithUpdate(arg0);
+ }
}
import eu.etaxonomy.cdm.model.view.AuditEvent;
import eu.etaxonomy.cdm.model.view.AuditEventRecord;
import eu.etaxonomy.cdm.persistence.dao.common.AuditEventSort;
+import eu.etaxonomy.cdm.persistence.dto.MergeResult;
import eu.etaxonomy.cdm.persistence.dto.UuidAndTitleCache;
import eu.etaxonomy.cdm.persistence.query.Grouping;
import eu.etaxonomy.cdm.persistence.query.MatchMode;
public List<Reference> merge(List<Reference> arg0) {
return defaultService.merge(arg0);
}
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.cdm.api.service.IService#merge(java.util.List, boolean)
+ */
+ @Override
+ public List<MergeResult<Reference>> merge(List<Reference> arg0, boolean arg1) {
+ return defaultService.merge(arg0, arg1);
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.cdm.api.service.IService#merge(eu.etaxonomy.cdm.model.common.ICdmBase, boolean)
+ */
+ @Override
+ public MergeResult<Reference> merge(Reference arg0, boolean arg1) {
+ return defaultService.merge(arg0, arg1);
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.cdm.api.service.IService#loadWithUpdate(java.util.UUID)
+ */
+ @Override
+ public Reference loadWithUpdate(UUID arg0) {
+ return defaultService.loadWithUpdate(arg0);
+ }
+
+
}
import eu.etaxonomy.cdm.model.view.AuditEvent;
import eu.etaxonomy.cdm.model.view.AuditEventRecord;
import eu.etaxonomy.cdm.persistence.dao.common.AuditEventSort;
+import eu.etaxonomy.cdm.persistence.dto.MergeResult;
import eu.etaxonomy.cdm.persistence.dto.UuidAndTitleCache;
import eu.etaxonomy.cdm.persistence.fetch.CdmFetch;
import eu.etaxonomy.cdm.persistence.query.Grouping;
}
/* (non-Javadoc)
- * @see eu.etaxonomy.cdm.api.service.ITaxonService#changeRelatedTaxonToSynonym(java.util.UUID, java.util.UUID, eu.etaxonomy.cdm.model.taxon.TaxonRelationshipType, eu.etaxonomy.cdm.model.taxon.SynonymRelationshipType)
+ * @see eu.etaxonomy.cdm.api.service.ITaxonService#changeSynonymToRelatedTaxon(java.util.UUID, java.util.UUID, eu.etaxonomy.cdm.model.taxon.TaxonRelationshipType, eu.etaxonomy.cdm.model.reference.Reference, java.lang.String)
*/
@Override
- public UpdateResult changeRelatedTaxonToSynonym(UUID arg0, UUID arg1, TaxonRelationshipType arg2,
- SynonymRelationshipType arg3) throws DataChangeNoRollbackException {
- return defaultService.changeRelatedTaxonToSynonym(arg0, arg1, arg2, arg3);
+ public UpdateResult changeSynonymToRelatedTaxon(UUID arg0, UUID arg1, TaxonRelationshipType arg2, Reference arg3,
+ String arg4) {
+ return defaultService.changeSynonymToRelatedTaxon(arg0, arg1, arg2, arg3, arg4);
}
/* (non-Javadoc)
- * @see eu.etaxonomy.cdm.api.service.ITaxonService#changeSynonymToRelatedTaxon(java.util.UUID, java.util.UUID, eu.etaxonomy.cdm.model.taxon.TaxonRelationshipType, eu.etaxonomy.cdm.model.reference.Reference, java.lang.String)
+ * @see eu.etaxonomy.cdm.api.service.ITaxonService#changeRelatedTaxonToSynonym(java.util.UUID, java.util.UUID, eu.etaxonomy.cdm.model.taxon.TaxonRelationshipType, eu.etaxonomy.cdm.model.taxon.SynonymRelationshipType)
*/
@Override
- public UpdateResult changeSynonymToRelatedTaxon(UUID arg0, UUID arg1, TaxonRelationshipType arg2, Reference arg3,
- String arg4) {
- return defaultService.changeSynonymToRelatedTaxon(arg0, arg1, arg2, arg3, arg4);
+ public UpdateResult changeRelatedTaxonToSynonym(UUID arg0, UUID arg1, TaxonRelationshipType arg2,
+ SynonymRelationshipType arg3) throws DataChangeNoRollbackException {
+ return defaultService.changeRelatedTaxonToSynonym(arg0, arg1, arg2, arg3);
+
}
/* (non-Javadoc)
Reference arg5, String arg6) throws HomotypicalGroupChangeException {
return defaultService.changeSynonymToAcceptedTaxon(arg0, arg1, arg2, arg3, arg4, arg5, arg6);
}
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.cdm.api.service.IService#merge(java.util.List, boolean)
+ */
+ @Override
+ public List<MergeResult<TaxonBase>> merge(List<TaxonBase> arg0, boolean arg1) {
+ return defaultService.merge(arg0, arg1);
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.cdm.api.service.IService#merge(eu.etaxonomy.cdm.model.common.ICdmBase, boolean)
+ */
+ @Override
+ public MergeResult<TaxonBase> merge(TaxonBase arg0, boolean arg1) {
+ return defaultService.merge(arg0, arg1);
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.cdm.api.service.IService#loadWithUpdate(java.util.UUID)
+ */
+ @Override
+ public TaxonBase loadWithUpdate(UUID arg0) {
+ return defaultService.loadWithUpdate(arg0);
+ }
+
+
}
import eu.etaxonomy.cdm.model.view.AuditEvent;
import eu.etaxonomy.cdm.model.view.AuditEventRecord;
import eu.etaxonomy.cdm.persistence.dao.common.AuditEventSort;
+import eu.etaxonomy.cdm.persistence.dto.MergeResult;
import eu.etaxonomy.cdm.persistence.dto.UuidAndTitleCache;
import eu.etaxonomy.cdm.persistence.query.Grouping;
import eu.etaxonomy.cdm.persistence.query.MatchMode;
public DeleteResult delete(UUID arg0, TermDeletionConfigurator arg1) {
return defaultService.delete(arg0, arg1);
}
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.cdm.api.service.IService#merge(java.util.List, boolean)
+ */
+ @Override
+ public List<MergeResult<DefinedTermBase>> merge(List<DefinedTermBase> arg0, boolean arg1) {
+ return defaultService.merge(arg0, arg1);
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.cdm.api.service.IService#merge(eu.etaxonomy.cdm.model.common.ICdmBase, boolean)
+ */
+ @Override
+ public MergeResult<DefinedTermBase> merge(DefinedTermBase arg0, boolean arg1) {
+ return defaultService.merge(arg0, arg1);
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.cdm.api.service.IService#loadWithUpdate(java.util.UUID)
+ */
+ @Override
+ public DefinedTermBase loadWithUpdate(UUID arg0) {
+ return defaultService.loadWithUpdate(arg0);
+ }
+
}
import java.util.HashSet;
import java.util.Map.Entry;
import java.util.Set;
-import java.util.UUID;
import org.eclipse.core.runtime.IProgressMonitor;
import org.eclipse.jface.action.MenuManager;
import eu.etaxonomy.cdm.api.conversation.ConversationHolder;
import eu.etaxonomy.cdm.api.conversation.IConversationEnabled;
-import eu.etaxonomy.cdm.api.service.IOccurrenceService;
import eu.etaxonomy.cdm.api.service.molecular.ISequenceService;
import eu.etaxonomy.cdm.model.common.CdmBase;
import eu.etaxonomy.cdm.model.molecular.Sequence;
*/
public class DerivateView extends EditorPart implements IPartContentHasFactualData, IDirtyMarkable,
IConversationEnabled, IPartContentHasDetails, IPartContentHasSupplementalData, IPartContentHasMedia,
- ISelectionChangedListener, IPostOperationEnabled {
+ ISelectionChangedListener, IPostOperationEnabled{
public static final String ID = "eu.etaxonomy.taxeditor.editor.view.derivate.DerivateView"; //$NON-NLS-1$
private ISelection selection = null;
+
+ private DerivateContentProvider contentProvider;
+
/**
* Default constructor
*/
@Override
public void createPartControl(Composite parent) {
viewer = new TreeViewer(new Tree(parent, SWT.MULTI | SWT.H_SCROLL | SWT.V_SCROLL | SWT.FULL_SELECTION));
- viewer.setContentProvider(new DerivateContentProvider());
+ contentProvider = new DerivateContentProvider();
+ viewer.setContentProvider(contentProvider);
labelProvider = new DerivateLabelProvider();
labelProvider.setConversation(conversation);
viewer.setLabelProvider(labelProvider);
generateMultiLinkSingleReads();
labelProvider.setMultiLinkSingleReads(multiLinkSingleReads);
IEditorInput editorInput = getEditorInput();
- viewer.setInput(((DerivateViewEditorInput) editorInput).getRootUUIDs());
+ viewer.setInput(((DerivateViewEditorInput) editorInput).getRootEntities());
//set selection to selected derivate if only one was selected
if(editorInput instanceof DerivateViewEditorInput){
- Set<UUID> derivateUUIDs = ((DerivateViewEditorInput) editorInput).getDerivateUUIDs();
- if(derivateUUIDs.size()==1){
- SpecimenOrObservationBase<?> specimen = CdmStore.getService(IOccurrenceService.class).load(derivateUUIDs.iterator().next());
- if(specimen!=null){
+ Set<SpecimenOrObservationBase<?>> derivateEntities = ((DerivateViewEditorInput) editorInput).getDerivateEntities();
+ if(derivateEntities.size()==1){
+ SpecimenOrObservationBase<?> specimen = derivateEntities.iterator().next();
+ if(specimen != null){
viewer.setSelection(new StructuredSelection(new TreeNode(specimen)));
}
}
// commit the conversation and start a new transaction immediately
conversation.commit(true);
+ ((DerivateViewEditorInput) getEditorInput()).merge();
monitor.worked(1);
this.setDirty(false);
if(!conversation.isBound()){
conversation.bind();
}
+ ((DerivateViewEditorInput) getEditorInput()).bind();
}
@Override
viewer.refresh();
}
+ //FIXME:Remoting hack to make this work for remoting
+ //This should actually be resolved using remoting post operations
+ public void remove(Object obj) {
+ Set<SpecimenOrObservationBase<?>> rootEntities = ((DerivateViewEditorInput) getEditorInput()).getRootEntities();
+ rootEntities.remove(obj);
+ viewer.setInput(rootEntities);
+ }
+
private void generateMultiLinkSingleReads() {
Set<SingleRead> multiLinkSingleReads = new HashSet<SingleRead>();
for(Entry<SingleRead, Collection<Sequence>> entry:CdmStore.getService(ISequenceService.class).getSingleReadSequencesMap().entrySet()){
return true;
}
+ @Override
+ public void dispose() {
+ ((DerivateViewEditorInput) getEditorInput()).dispose();
+ super.dispose();
+ }
+
+
@Override
public boolean canAttachMedia() {
return true;
}
-
}
*/
package eu.etaxonomy.taxeditor.editor.view.derivate;
+import java.util.ArrayList;
+import java.util.Arrays;
+import java.util.HashMap;
import java.util.HashSet;
+import java.util.List;
+import java.util.Map;
import java.util.Set;
import java.util.UUID;
import org.eclipse.ui.IEditorInput;
import org.eclipse.ui.IPersistableElement;
+import eu.etaxonomy.cdm.api.application.CdmApplicationState;
import eu.etaxonomy.cdm.api.conversation.ConversationHolder;
import eu.etaxonomy.cdm.api.service.IOccurrenceService;
import eu.etaxonomy.cdm.model.occurrence.DerivedUnit;
import eu.etaxonomy.cdm.model.occurrence.FieldUnit;
import eu.etaxonomy.cdm.model.occurrence.SpecimenOrObservationBase;
+import eu.etaxonomy.taxeditor.editor.CdmEntitySessionInput;
import eu.etaxonomy.taxeditor.editor.EditorUtil;
import eu.etaxonomy.taxeditor.editor.Messages;
import eu.etaxonomy.taxeditor.model.MessagingUtils;
* @date 25.11.2013
*
*/
-public class DerivateViewEditorInput implements IEditorInput{
+public class DerivateViewEditorInput extends CdmEntitySessionInput implements IEditorInput {
/**
* The selected derivate {@link UUID}s
*/
- private final Set<UUID> derivateUUIDs;
+ private final Set<SpecimenOrObservationBase<?>> derivateEntities;
/**
* List of the {@link UUID}s of the root elements of the hierarchy (may be the same objects as the derivates)
*/
+ private Set<SpecimenOrObservationBase<?>> rootEntities;
private Set<UUID> rootUUIDs;
private final ConversationHolder conversationHolder;
+ private static final List<String> SPECIMEN_INIT_STRATEGY = Arrays.asList(new String[] {
+ "descriptions",
+ "annotations",
+ "markers",
+ "credits",
+ "extensions",
+ "rights",
+ "sources",
+ "derivationEvents.derivatives.annotations",
+ "derivationEvents.derivatives.markers",
+ "derivationEvents.derivatives.credits",
+ "derivationEvents.derivatives.extensions",
+ "derivationEvents.derivatives.rights",
+ "derivationEvents.derivatives.sources"
+ });
+
/**
* Creates an editor input for the {@link DerivateView} with the currently selected derivates and the
* corresponding {@link FieldUnit}s (both may be the same object).
* @param rootUUIDs the root of the hierarchy
*/
public DerivateViewEditorInput(Set<UUID> derivateUuids) {
- super();
+ super(false);
+ rootUUIDs = derivateUuids;
+ //FIXME:Remoting temporary hack for making the sessions work
+ //This should ideally be changed to initializing the
+ //super class with a collection of (id) objects which can
+ //then be used for the hashCode, equals methods
+ initSession();
this.conversationHolder = CdmStore.createConversation();
- this.derivateUUIDs = derivateUuids;
- this.rootUUIDs = new HashSet<UUID>();
+ this.derivateEntities = new HashSet<SpecimenOrObservationBase<?>>();
+ this.rootEntities = new HashSet<SpecimenOrObservationBase<?>>();
for (UUID uuid : derivateUuids) {
- SpecimenOrObservationBase<?> derivate = CdmStore.getService(IOccurrenceService.class).load(uuid);
+ SpecimenOrObservationBase<?> derivate = CdmStore.getService(IOccurrenceService.class).load(uuid, SPECIMEN_INIT_STRATEGY);
+ derivateEntities.add(derivate);
if(derivate instanceof FieldUnit){
- rootUUIDs.add(uuid);
+ rootEntities.add(derivate);
}
else if(derivate instanceof DerivedUnit){
SpecimenOrObservationBase<?> topMostDerivate = EditorUtil.getTopMostDerivate(derivate);
if(topMostDerivate!=null){
- rootUUIDs.add(topMostDerivate.getUuid());
+ rootEntities.add(topMostDerivate);
}
}
}
- if(rootUUIDs.isEmpty()){
- rootUUIDs = derivateUUIDs;
+ if(rootEntities.isEmpty()){
+ rootEntities = derivateEntities;
}
- if(rootUUIDs.isEmpty()){
+ if(rootEntities.isEmpty()){
MessagingUtils.messageDialog(Messages.DerivateViewEditorInput_FAIL_INIT, DerivateViewEditorInput.class, Messages.DerivateViewEditorInput_NO_ROOT);
}
+
+
}
/* (non-Javadoc)
private String getEditorName() {
String name = null;
- for(UUID uuid:rootUUIDs){
- SpecimenOrObservationBase<?> specimen = CdmStore.getService(IOccurrenceService.class).load(uuid);
+ for( SpecimenOrObservationBase<?> specimen : rootEntities){
if(specimen!=null){
if(name==null){
name = DerivateLabelProvider.getDerivateText(specimen, conversationHolder);
return name;
}
- public Set<UUID> getRootUUIDs() {
- return rootUUIDs;
+ @Override
+ public Set<SpecimenOrObservationBase<?>> getRootEntities() {
+ return rootEntities;
}
- public Set<UUID> getDerivateUUIDs() {
- return derivateUUIDs;
+ public Set<SpecimenOrObservationBase<?>> getDerivateEntities() {
+ return derivateEntities;
}
- public void addRootUuid(UUID root){
- rootUUIDs.add(root);
+ public void addRootEntity(SpecimenOrObservationBase<?> root){
+ rootEntities.add(root);
}
return true;
}
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.editor.CdmEntitySessionInput#merge()
+ */
+ @Override
+ public void merge() {
+ if(CdmStore.getCurrentSessionManager().isRemoting()) {
+ CdmApplicationState.getCurrentAppConfig().getOccurrenceService().merge(new ArrayList(getRootEntities()), true);
+ }
+
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled#getPropertyPathsMap()
+ */
+ @Override
+ public Map<Object, List<String>> getPropertyPathsMap() {
+ List<String> specimenPropertyPaths = Arrays.asList(new String[] {
+ "descriptions",
+ "derivationEvents.derivates",
+ "annotations",
+ "markers",
+ "credits",
+ "extensions",
+ "rights",
+ "sources"
+ });
+ Map<Object, List<String>> specimenPropertyPathMap =
+ new HashMap<Object, List<String>>();
+ specimenPropertyPathMap.put(SpecimenOrObservationBase.class,specimenPropertyPaths);
+ return specimenPropertyPathMap;
+ }
+
}
import org.eclipse.ui.PlatformUI;
import org.eclipse.ui.actions.CompoundContributionItem;
+import eu.etaxonomy.cdm.api.application.CdmApplicationState;
import eu.etaxonomy.cdm.api.facade.DerivedUnitFacadeCacheStrategy;
+import eu.etaxonomy.cdm.api.service.IOccurrenceService;
import eu.etaxonomy.cdm.model.media.Media;
import eu.etaxonomy.cdm.model.molecular.DnaSample;
import eu.etaxonomy.cdm.model.molecular.Sequence;
import eu.etaxonomy.taxeditor.editor.view.derivate.DerivateView;
import eu.etaxonomy.taxeditor.model.AbstractUtility;
import eu.etaxonomy.taxeditor.model.MessagingUtils;
+import eu.etaxonomy.taxeditor.store.CdmStore;
import eu.etaxonomy.taxeditor.ui.dialog.selection.MediaSelectionDialog;
/**
public void widgetSelected(SelectionEvent e) {
//select media
Media media = MediaSelectionDialog.select(AbstractUtility.getShell(), null, null);
- //create MediaSpecimen
- MediaSpecimen mediaSpecimen = MediaSpecimen.NewInstance(specimenType);
- mediaSpecimen.setMediaSpecimen(media);
+ if(media!=null){
+ //create MediaSpecimen
+ MediaSpecimen mediaSpecimen = MediaSpecimen.NewInstance(specimenType);
+ mediaSpecimen.setMediaSpecimen(media);
- //attach to parent
- if(selectedNode.getValue() instanceof SpecimenOrObservationBase){
- SpecimenOrObservationBase<?> specimenOrObservationBase = (SpecimenOrObservationBase<?>)selectedNode.getValue();
+ //attach to parent
+ if(selectedNode.getValue() instanceof SpecimenOrObservationBase){
+ SpecimenOrObservationBase<?> specimenOrObservationBase = (SpecimenOrObservationBase<?>)selectedNode.getValue();
- specimenOrObservationBase.addDerivationEvent(DerivationEvent.NewSimpleInstance(specimenOrObservationBase, mediaSpecimen, derivationEventType));
- mediaSpecimen.setCacheStrategy(new DerivedUnitFacadeCacheStrategy());
- mediaSpecimen.getTitleCache(); //update title cache
- }
+ specimenOrObservationBase.addDerivationEvent(DerivationEvent.NewSimpleInstance(specimenOrObservationBase, mediaSpecimen, derivationEventType));
+ mediaSpecimen.setCacheStrategy(new DerivedUnitFacadeCacheStrategy());
+ mediaSpecimen.getTitleCache(); //update title cache
+ if(CdmStore.getCurrentSessionManager().isRemoting()) {
+ CdmStore.getService(IOccurrenceService.class).merge(specimenOrObservationBase, true);
+ }
+ }
- //refresh view
- DerivateView derivateView = null;
- if(AbstractUtility.getActivePart() instanceof DerivateView){
- derivateView = (DerivateView) AbstractUtility.getActivePart();
- }
- if(derivateView!=null){
- derivateView.getConversationHolder().commit();
- derivateView.refreshTree(mediaSpecimen);
+ //refresh view
+ DerivateView derivateView = null;
+ if(AbstractUtility.getActivePart() instanceof DerivateView){
+ derivateView = (DerivateView) AbstractUtility.getActivePart();
+ }
+ if(derivateView!=null){
+
+ derivateView.getConversationHolder().commit();
+ derivateView.refreshTree(mediaSpecimen);
+ }
}
}
});
Sequence newInstance = Sequence.NewInstance(dnaSample, "", 0); //$NON-NLS-1$
createdElement = newInstance;
}
+ if(CdmStore.getCurrentSessionManager().isRemoting()) {
+ CdmStore.getService(IOccurrenceService.class).merge((SpecimenOrObservationBase) selectedDerivate, true);
+ }
}
else if(selectedDerivate instanceof Sequence){
SingleRead newInstance = SingleRead.NewInstance();
((Sequence) selectedDerivate).addSingleRead(newInstance);
createdElement = newInstance;
+ if(CdmStore.getCurrentSessionManager().isRemoting()) {
+ CdmApplicationState.getCurrentAppConfig().getSequenceService().merge((Sequence)selectedDerivate, true);
+ }
}
- else if(selectedDerivate instanceof SpecimenOrObservationBase && DerivedUnit.class.isAssignableFrom(childClass)){
+ if(selectedDerivate instanceof SpecimenOrObservationBase && DerivedUnit.class.isAssignableFrom(childClass)){
SpecimenOrObservationBase<?> specimenOrObservationBase = (SpecimenOrObservationBase<?>)selectedDerivate;
DerivedUnit derivedUnit;
if(childClass.equals(DnaSample.class)){
derivedUnit.setCacheStrategy(new DerivedUnitFacadeCacheStrategy());
derivedUnit.getTitleCache(); //update title cache
createdElement = derivedUnit;
+ if(CdmStore.getCurrentSessionManager().isRemoting()) {
+ CdmStore.getService(IOccurrenceService.class).merge((SpecimenOrObservationBase) selectedDerivate, true);
+ }
}
//refresh view
import org.eclipse.core.commands.ExecutionException;
import eu.etaxonomy.cdm.api.service.IOccurrenceService;
+import eu.etaxonomy.cdm.model.common.CdmBase;
import eu.etaxonomy.cdm.model.occurrence.FieldUnit;
import eu.etaxonomy.taxeditor.editor.view.derivate.DerivateView;
import eu.etaxonomy.taxeditor.editor.view.derivate.DerivateViewEditorInput;
return null;
}
FieldUnit fieldUnit = FieldUnit.NewInstance();
- CdmStore.getService(IOccurrenceService.class).save(fieldUnit);
+ fieldUnit = CdmBase.deproxy(CdmStore.getService(IOccurrenceService.class).save(fieldUnit), FieldUnit.class);
derivateView.getConversationHolder().commit();
DerivateViewEditorInput input = (DerivateViewEditorInput) derivateView.getEditorInput();
- input.addRootUuid(fieldUnit.getUuid());
+ input.addRootEntity(fieldUnit);
derivateView.refreshTree();
}
return null;
import eu.etaxonomy.cdm.api.service.DeleteResult;
import eu.etaxonomy.cdm.api.service.IOccurrenceService;
import eu.etaxonomy.cdm.api.service.config.SpecimenDeleteConfigurator;
+import eu.etaxonomy.cdm.api.service.molecular.ISequenceService;
import eu.etaxonomy.cdm.model.common.CdmBase;
import eu.etaxonomy.cdm.model.molecular.Sequence;
import eu.etaxonomy.cdm.model.molecular.SingleRead;
&& treeNode.getValue().equals(element)
&& treeNode.getParent()!=null
&& treeNode.getParent().getValue() instanceof Sequence){
- deleteResult = CdmStore.getService(IOccurrenceService.class).deleteSingleRead((SingleRead)element, (Sequence) treeNode.getParent().getValue());
- }
- else{
- deleteResult = CdmStore.getService(IOccurrenceService.class).deleteDerivateHierarchy(element, deleteConfigurator);
+ deleteResult = CdmStore.getService(IOccurrenceService.class).deleteSingleRead(((SingleRead)element).getUuid(),
+ ((Sequence) treeNode.getParent().getValue()).getUuid());
+ } else if(element instanceof Sequence){
+ deleteResult = CdmStore.getService(ISequenceService.class).delete(element.getUuid(), deleteConfigurator);
+ } else {
+ deleteResult = CdmStore.getService(IOccurrenceService.class).deleteDerivateHierarchy(element.getUuid(), deleteConfigurator);
}
if(deleteResult.isOk()){
if(getPostOperationEnabled() instanceof DerivateView){
DerivateView derivateView = (DerivateView) getPostOperationEnabled();
+ derivateView.remove(element);
//update DerivateView
derivateView.getConversationHolder().commit();
IStatus returnStatus = postExecute(null);
if(fromParentSpecimen instanceof SpecimenOrObservationBase<?>
&& fromNode!=null
&& !fromNode.equals(targetNode)){//don't drag on direct parent node)
- return occurrenceService.moveDerivate((SpecimenOrObservationBase<?>)fromParentSpecimen, targetSpecimen, draggedSpecimen);
+ return occurrenceService.moveDerivate(((SpecimenOrObservationBase<?>)fromParentSpecimen).getUuid(),
+ targetSpecimen.getUuid(),
+ draggedSpecimen.getUuid()).isOk();
}
}
else if(draggedNodeValue instanceof SingleRead && targetNodeValue instanceof Sequence){
SingleRead singleRead = (SingleRead) draggedNodeValue;
if(fromParentSpecimen instanceof Sequence){
- return CdmStore.getService(ISequenceService.class).moveSingleRead((Sequence)fromParentSpecimen, (Sequence)targetNodeValue, singleRead).isOk();
+ return CdmStore.getService(ISequenceService.class).moveSingleRead(((Sequence)fromParentSpecimen).getUuid(),
+ ((Sequence)targetNodeValue).getUuid(),
+ singleRead.getUuid()).isOk();
+
}
}
else if(draggedNodeValue instanceof Sequence && targetNodeValue instanceof DnaSample && ((SpecimenOrObservationBase<?>) targetNodeValue).getRecordBasis()==SpecimenOrObservationType.DnaSample){
Sequence sequence = (Sequence)draggedNodeValue;
if(fromParentSpecimen instanceof DnaSample && ((SpecimenOrObservationBase<?>) targetNodeValue).getRecordBasis()==SpecimenOrObservationType.DnaSample){
- return occurrenceService.moveSequence((DnaSample)fromParentSpecimen, (DnaSample)targetNodeValue, sequence).isOk();
+ return occurrenceService.moveSequence(((DnaSample)fromParentSpecimen).getUuid(),
+ ((DnaSample)targetNodeValue).getUuid(),
+ sequence.getUuid()).isOk();
+
}
}
return false;
protected static final Object[] NO_CHILDREN = new Object[0];
protected Map<DescriptionBase<?>, FeatureNodeContainerTree> featureNodeContainerCache;
private boolean showOnlyIndividualAssociations;
+ private static FeatureTree defaultFeatureTree = null;
public DescriptiveContentProvider(Map<DescriptionBase<?>, FeatureNodeContainerTree> featureNodeContainerCache) {
this(featureNodeContainerCache, false);
* @return
*/
private FeatureTree getFeatureTree(DescriptionBase description){
- FeatureTree featureTree = null;
+ if(defaultFeatureTree == null) {
+ defaultFeatureTree = FeatureTree.NewInstance(TermStore.getTerms(Feature.class));
+ }
+ FeatureTree featureTree;
// TODO change this to the feature tree associated with this taxon description
if (description.hasStructuredData()){
featureTree = PreferencesUtil.getDefaultFeatureTreeForStructuredDescription();
// create a transient tree with all features if none was selected
if(featureTree == null){
- featureTree = FeatureTree.NewInstance(TermStore.getTerms(Feature.class));
+ featureTree = defaultFeatureTree;
}
return featureTree;
import eu.etaxonomy.taxeditor.editor.view.checklist.ChecklistEditor;
import eu.etaxonomy.taxeditor.editor.view.derivate.DerivateView;
import eu.etaxonomy.taxeditor.editor.view.derivate.DerivateViewEditorInput;
+import eu.etaxonomy.taxeditor.editor.view.media.MediaViewPart;
import eu.etaxonomy.taxeditor.model.AbstractUtility;
import eu.etaxonomy.taxeditor.model.FeatureNodeContainer;
import eu.etaxonomy.taxeditor.model.FeatureNodeContainerTree;
if(part == this){
return;
}
- if(part instanceof DetailsViewPart || part instanceof SupplementalDataViewPart){
- // do not show empty page as these views are also used to edit the description selected in this view
- return;
- }
+ if (part instanceof DetailsViewPart || part instanceof SupplementalDataViewPart
+ || part instanceof MediaViewPart) {
+ // do not show empty page as these views are also used to edit the
+ // description selected in this view
+ return;
+ }
// unpackage TreeNode of DerivateView
else if(part instanceof DerivateView){
TreeNode treeNodeOfSelection = EditorUtil.getTreeNodeOfSelection(selection);
import eu.etaxonomy.taxeditor.model.MessagingUtils;
import eu.etaxonomy.taxeditor.operation.AbstractPostOperation;
import eu.etaxonomy.taxeditor.operation.IPostOperationEnabled;
+import eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled;
/**
* <p>DeleteDescriptionHandler class.</p>
IWorkbenchPart part = HandlerUtil.getActivePart(event);
IPostOperationEnabled postOperationEnabled = (part instanceof IPostOperationEnabled) ? (IPostOperationEnabled) part : null;
+ ICdmEntitySessionEnabled cdmEntitySessionEnabled = (part instanceof ICdmEntitySessionEnabled) ? (ICdmEntitySessionEnabled) part : null;
try {
String label = event.getCommand().getName();
// TaxonDescription
if(object instanceof TaxonDescription){
- operations.add(new DeleteTaxonDescriptionOperation(label, undoContext, (TaxonDescription) object, postOperationEnabled));
+ operations.add(new DeleteTaxonDescriptionOperation(label, undoContext, (TaxonDescription) object, postOperationEnabled, cdmEntitySessionEnabled));
}
else if(object instanceof SpecimenDescription){
- operations.add(new DeleteSpecimenDescriptionOperation(label, undoContext, (SpecimenDescription) object, postOperationEnabled));
+ operations.add(new DeleteSpecimenDescriptionOperation(label, undoContext, (SpecimenDescription) object, postOperationEnabled, cdmEntitySessionEnabled)) ;
}
// DescriptionElementBase
else if(object instanceof DescriptionElementBase){
- operations.add(new DeleteDescriptionElementOperation(label, undoContext, (DescriptionElementBase) object, postOperationEnabled));
+ operations.add(new DeleteDescriptionElementOperation(label, undoContext, (DescriptionElementBase) object, postOperationEnabled, cdmEntitySessionEnabled));
}
else if(object instanceof FeatureNodeContainer){
List<DescriptionElementBase> descriptions = ((FeatureNodeContainer) object).getDescriptionElementsForEntireBranch();
for(DescriptionElementBase description : descriptions){
- operations.add(new DeleteDescriptionElementOperation(label, undoContext, description, postOperationEnabled));
+ operations.add(new DeleteDescriptionElementOperation(label, undoContext, description, postOperationEnabled, cdmEntitySessionEnabled));
}
}
// Media
import eu.etaxonomy.cdm.api.service.IDescriptionService;
import eu.etaxonomy.cdm.hibernate.HibernateProxyHelper;
-import eu.etaxonomy.cdm.model.common.Annotation;
-import eu.etaxonomy.cdm.model.common.AnnotationType;
import eu.etaxonomy.cdm.model.common.CdmBase;
-import eu.etaxonomy.cdm.model.common.Language;
import eu.etaxonomy.cdm.model.description.DescriptionBase;
import eu.etaxonomy.cdm.model.description.DescriptionElementBase;
import eu.etaxonomy.cdm.model.description.TaxonDescription;
public class MoveDescriptionElementsHandler extends AbstractHandler implements IPostOperationEnabled{
private UUID newAcceptedTaxonNodeUuid;
private TaxonNameEditor editor;
- /* (non-Javadoc)
- * @see org.eclipse.core.commands.IHandler#execute(org.eclipse.core.commands.ExecutionEvent)
- */
+
@Override
public Object execute(ExecutionEvent event) throws ExecutionException {
}
DescriptionBase description = elements.get(0).getInDescription();
List<UUID> excludeTaxa = new ArrayList<UUID>();
- if (description.isInstanceOf(TaxonDescription.class)){
+ if (description!=null && description.isInstanceOf(TaxonDescription.class)){
TaxonDescription taxonDescription = HibernateProxyHelper.deproxy(description, TaxonDescription.class);
actualTaxon = taxonDescription.getTaxon();
excludeTaxa.add(actualTaxon.getUuid());
return null;
}
newAcceptedTaxonNodeUuid = newAcceptedTaxonNode.getUuid();
- TaxonDescription targetDescription = TaxonDescription.NewInstance(targetTaxon);
+
String moveMessage = String.format("Elements moved from %s", EditorUtil.getActiveMultiPageTaxonEditor().getTaxon());
- targetDescription.setTitleCache(moveMessage, true);
- Annotation annotation = Annotation.NewInstance(moveMessage, Language.getDefaultLanguage());
- annotation.setAnnotationType(AnnotationType.TECHNICAL());
- targetDescription.addAnnotation(annotation);
try {
AbstractPostOperation operation = new MoveDescriptionElementsOperation(
event.getCommand().getName(), EditorUtil.getUndoContext(),
- targetDescription, elements, false, this);
+ targetTaxon.getUuid(), moveMessage, elements, false, this);
- EditorUtil.executeOperation(operation);
+ AbstractUtility.executeOperation(operation);
//CdmStore.getService(ITaxonService.class).saveOrUpdate(targetTaxon);
return null;
}
- /* (non-Javadoc)
- * @see eu.etaxonomy.taxeditor.operations.IPostOperationEnabled#postOperation(eu.etaxonomy.cdm.model.common.CdmBase)
- */
/** {@inheritDoc} */
@Override
public boolean postOperation(CdmBase objectAffectedByOperation) {
@Override
public boolean onComplete() {
- // TODO Auto-generated method stub
return false;
}
import eu.etaxonomy.cdm.model.common.CdmBase;
import eu.etaxonomy.cdm.model.description.DescriptionBase;
import eu.etaxonomy.cdm.model.description.TaxonDescription;
+import eu.etaxonomy.cdm.model.taxon.Classification;
import eu.etaxonomy.cdm.model.taxon.TaxonNode;
import eu.etaxonomy.taxeditor.editor.EditorUtil;
import eu.etaxonomy.taxeditor.editor.MultiPageTaxonEditor;
import eu.etaxonomy.taxeditor.editor.Page;
+import eu.etaxonomy.taxeditor.editor.TaxonEditorInput;
import eu.etaxonomy.taxeditor.editor.name.TaxonNameEditor;
import eu.etaxonomy.taxeditor.editor.view.descriptive.operation.MoveDescriptionToOtherTaxonOperation;
import eu.etaxonomy.taxeditor.model.AbstractUtility;
import eu.etaxonomy.taxeditor.model.FeatureNodeContainer;
import eu.etaxonomy.taxeditor.model.MessagingUtils;
import eu.etaxonomy.taxeditor.operation.IPostOperationEnabled;
+import eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled;
import eu.etaxonomy.taxeditor.store.CdmStore;
import eu.etaxonomy.taxeditor.ui.dialog.selection.TaxonNodeSelectionDialog;
} else if (element instanceof DescriptionBase){
uuid = ((DescriptionBase)element).getUuid();
}
-
+
if (uuid != null){
descriptions.add((TaxonDescription) CdmStore.getService(IDescriptionService.class).load(uuid, null));
}
List<UUID> excludeTaxa = new ArrayList<UUID>();
editor = (TaxonNameEditor) EditorUtil.getActiveEditorPage(Page.NAME);
excludeTaxa.add(descriptions.get(0).getTaxon().getUuid());
+
+ //get current taxon node
+ TaxonNode node = null;
+ Classification classification = null;
+ MultiPageTaxonEditor taxonEditor = EditorUtil.getActiveMultiPageTaxonEditor();
+ if(taxonEditor!=null){
+ node = ((TaxonEditorInput) taxonEditor.getEditorInput()).getTaxonNode();
+ classification = node.getClassification();
+ }
TaxonNode newAcceptedTaxonNode = TaxonNodeSelectionDialog.select(HandlerUtil.getActiveShell(event),
editor.getConversationHolder(),
"Choose the accepted taxon",
excludeTaxa,
- null,
- null);
+ node,
+ classification);
if (newAcceptedTaxonNode == null) {
return null;
try {
for(TaxonDescription description : descriptions){
operation = new MoveDescriptionToOtherTaxonOperation(event.getCommand().getName(),
- editor.getUndoContext(), description, newAcceptedTaxonNode, this, editor);
+ editor.getUndoContext(),
+ description,
+ newAcceptedTaxonNode,
+ this,
+ editor,
+ (ICdmEntitySessionEnabled)editor.getEditorInput());
AbstractUtility.executeOperation(operation);
}
/**
* Copyright (C) 2007 EDIT
-* European Distributed Institute of Taxonomy
+* European Distributed Institute of Taxonomy
* http://www.e-taxonomy.eu
-*
+*
* The contents of this file are subject to the Mozilla Public License Version 1.1
* See LICENSE.TXT at the top of this package for the full license terms.
*/
import eu.etaxonomy.taxeditor.model.MessagingUtils;
import eu.etaxonomy.taxeditor.operation.AbstractPostTaxonOperation;
import eu.etaxonomy.taxeditor.operation.IPostOperationEnabled;
+import eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled;
/**
* <p>DeleteDescriptionElementOperation class.</p>
* @version 1.0
*/
public class DeleteDescriptionElementOperation extends AbstractPostTaxonOperation {
-
- private DescriptionElementBase element;
+
+ private final DescriptionElementBase element;
private DescriptionBase description = null;
/**
* @param postOperationEnabled a {@link eu.etaxonomy.taxeditor.operation.IPostOperationEnabled} object.
*/
public DeleteDescriptionElementOperation(String label, IUndoContext undoContext,
- DescriptionElementBase element, IPostOperationEnabled postOperationEnabled) {
- super(label, undoContext, postOperationEnabled);
-
+ DescriptionElementBase element, IPostOperationEnabled postOperationEnabled,
+ ICdmEntitySessionEnabled cdmEntitySessionEnabled) {
+ super(label, undoContext, postOperationEnabled, cdmEntitySessionEnabled);
+
this.element = element;
}
@Override
public IStatus execute(IProgressMonitor monitor, IAdaptable info)
throws ExecutionException {
-
+
description = element.getInDescription();
-
+
monitor.worked(20);
-
+
// Remove element from description
if (description == null) {
MessagingUtils.error(this.getClass(), "Couldn't find element's description!", null);
throws ExecutionException {
description.addElement(element);
-
+
return postExecute(element);
}
}
import eu.etaxonomy.cdm.model.occurrence.SpecimenOrObservationBase;
import eu.etaxonomy.taxeditor.operation.AbstractPostOperation;
import eu.etaxonomy.taxeditor.operation.IPostOperationEnabled;
+import eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled;
import eu.etaxonomy.taxeditor.store.CdmStore;
/**
private final SpecimenDescription description;
- public DeleteSpecimenDescriptionOperation(String label, IUndoContext undoContext,
- SpecimenDescription description, IPostOperationEnabled postOperationEnabled) {
- super(label, undoContext, description.getDescribedSpecimenOrObservation(), postOperationEnabled);
+ public DeleteSpecimenDescriptionOperation(String label,
+ IUndoContext undoContext,
+ SpecimenDescription description,
+ IPostOperationEnabled postOperationEnabled,
+ ICdmEntitySessionEnabled cdmEntitySessionEnabled) {
+ super(label, undoContext, description.getDescribedSpecimenOrObservation(), postOperationEnabled, cdmEntitySessionEnabled);
this.description = description;
}
package eu.etaxonomy.taxeditor.editor.view.descriptive.operation;
-import java.util.ArrayList;
-import java.util.List;
-
import org.eclipse.core.commands.ExecutionException;
import org.eclipse.core.commands.operations.IUndoContext;
import org.eclipse.core.runtime.IAdaptable;
import eu.etaxonomy.cdm.model.description.TaxonDescription;
import eu.etaxonomy.taxeditor.operation.AbstractPostTaxonOperation;
import eu.etaxonomy.taxeditor.operation.IPostOperationEnabled;
+import eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled;
import eu.etaxonomy.taxeditor.store.CdmStore;
/**
* @param description a {@link eu.etaxonomy.cdm.model.description.TaxonDescription} object.
* @param postOperationEnabled a {@link eu.etaxonomy.taxeditor.operation.IPostOperationEnabled} object.
*/
- public DeleteTaxonDescriptionOperation(String label, IUndoContext undoContext,
- TaxonDescription description, IPostOperationEnabled postOperationEnabled) {
- super(label, undoContext, postOperationEnabled);
+ public DeleteTaxonDescriptionOperation(String label,
+ IUndoContext undoContext,
+ TaxonDescription description,
+ IPostOperationEnabled postOperationEnabled,
+ ICdmEntitySessionEnabled cdmEntitySessionEnabled) {
+ super(label, undoContext, postOperationEnabled, cdmEntitySessionEnabled);
this.description = description;
element = description.getTaxon();
monitor.worked(20);
if (description != null){
- List<String> propertyPaths = new ArrayList<String>();
- propertyPaths.add("taxon");
- TaxonDescription loadedDescription = (TaxonDescription) CdmStore.getService(IDescriptionService.class).load(description.getUuid(), propertyPaths);
- CdmStore.getService(IDescriptionService.class).deleteDescription(loadedDescription);
+ CdmStore.getService(IDescriptionService.class).deleteDescription(description.getUuid());
return postExecute(description);
}
return null;
-
+
}
/* (non-Javadoc)
// $Id$
/**
* Copyright (C) 2007 EDIT
-* European Distributed Institute of Taxonomy
+* European Distributed Institute of Taxonomy
* http://www.e-taxonomy.eu
-*
+*
* The contents of this file are subject to the Mozilla Public License Version 1.1
* See LICENSE.TXT at the top of this package for the full license terms.
*/
package eu.etaxonomy.taxeditor.editor.view.descriptive.operation;
import java.util.Collection;
+import java.util.HashSet;
+import java.util.Set;
+import java.util.UUID;
import org.eclipse.core.commands.ExecutionException;
import org.eclipse.core.commands.operations.IUndoContext;
import org.eclipse.core.runtime.IAdaptable;
import org.eclipse.core.runtime.IProgressMonitor;
import org.eclipse.core.runtime.IStatus;
-import org.eclipse.swt.widgets.Display;
-import org.eclipse.ui.PartInitException;
import eu.etaxonomy.cdm.api.service.IDescriptionService;
-import eu.etaxonomy.cdm.model.common.CdmBase;
+import eu.etaxonomy.cdm.api.service.UpdateResult;
import eu.etaxonomy.cdm.model.description.DescriptionBase;
import eu.etaxonomy.cdm.model.description.DescriptionElementBase;
-import eu.etaxonomy.taxeditor.editor.EditorUtil;
-import eu.etaxonomy.taxeditor.editor.MultiPageTaxonEditor;
-import eu.etaxonomy.taxeditor.model.AbstractUtility;
-import eu.etaxonomy.taxeditor.model.MessagingUtils;
import eu.etaxonomy.taxeditor.operation.AbstractPostTaxonOperation;
import eu.etaxonomy.taxeditor.operation.IPostOperationEnabled;
import eu.etaxonomy.taxeditor.store.CdmStore;
private Collection<DescriptionElementBase> descriptionElements;
private DescriptionBase targetDescription;
private IDescriptionService service;
+ private UUID targetTaxonUuid;
+ private String moveMessage;
private boolean isCopy;
/**
- *
+ *
* @param label
* @param undoContext
* @param targetDescription
* @param postOperationEnabled
*/
public MoveDescriptionElementsOperation(String label,
- IUndoContext undoContext, DescriptionBase targetDescription,
+ IUndoContext undoContext, DescriptionBase targetDescription,
Collection<DescriptionElementBase> descriptionElements, boolean isCopy,
IPostOperationEnabled postOperationEnabled) {
super(label, undoContext, postOperationEnabled);
this.targetDescription = targetDescription;
this.descriptionElements = descriptionElements;
this.isCopy = isCopy;
-
+
service = CdmStore.getService(IDescriptionService.class);
}
+ public MoveDescriptionElementsOperation(String label,
+ IUndoContext undoContext, UUID targetTaxonUuid,String moveMessage,
+ Collection<DescriptionElementBase> descriptionElements, boolean isCopy,
+ IPostOperationEnabled postOperationEnabled) {
+ super(label, undoContext, postOperationEnabled);
+ this.targetTaxonUuid = targetTaxonUuid;
+ this.descriptionElements = descriptionElements;
+ this.moveMessage = moveMessage;
+ this.isCopy = isCopy;
+
+ service = CdmStore.getService(IDescriptionService.class);
+ }
+
/* (non-Javadoc)
* @see org.eclipse.core.commands.operations.AbstractOperation#execute(org.eclipse.core.runtime.IProgressMonitor, org.eclipse.core.runtime.IAdaptable)
*/
@Override
public IStatus execute(IProgressMonitor monitor, IAdaptable info)
throws ExecutionException {
-
-
- service.moveDescriptionElementsToDescription(descriptionElements, targetDescription, isCopy);
-
-
+
+ Set<UUID> descriptionElementsUuid = new HashSet<UUID>();
+ for(DescriptionElementBase deBase : descriptionElements) {
+ descriptionElementsUuid.add(deBase.getUuid());
+ }
+
+ if(targetDescription == null){
+ UpdateResult result = service.moveDescriptionElementsToDescription(descriptionElementsUuid, targetTaxonUuid, moveMessage, isCopy);
+
+ } else {
+ UUID targetDescriptionUuid = targetDescription.getUuid();
+ service.moveDescriptionElementsToDescription(descriptionElementsUuid, targetDescriptionUuid, isCopy);
+ }
return postExecute(targetDescription);
}
// TODO Auto-generated method stub
return null;
}
-
-
+
+
}
// $Id$
/**
* Copyright (C) 2007 EDIT
-* European Distributed Institute of Taxonomy
+* European Distributed Institute of Taxonomy
* http://www.e-taxonomy.eu
-*
+*
* The contents of this file are subject to the Mozilla Public License Version 1.1
* See LICENSE.TXT at the top of this package for the full license terms.
*/
import org.eclipse.core.runtime.IProgressMonitor;
import org.eclipse.core.runtime.IStatus;
+import eu.etaxonomy.cdm.api.application.CdmApplicationRemoteController;
+import eu.etaxonomy.cdm.api.application.CdmApplicationState;
import eu.etaxonomy.cdm.api.conversation.IConversationEnabled;
import eu.etaxonomy.cdm.api.service.IDescriptionService;
import eu.etaxonomy.cdm.model.common.Annotation;
import eu.etaxonomy.taxeditor.editor.EditorUtil;
import eu.etaxonomy.taxeditor.operation.AbstractPersistentPostOperation;
import eu.etaxonomy.taxeditor.operation.IPostOperationEnabled;
+import eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled;
import eu.etaxonomy.taxeditor.store.CdmStore;
/**
*/
public class MoveDescriptionToOtherTaxonOperation extends
AbstractPersistentPostOperation {
-
- private TaxonNode newAcceptedTaxonNode;
- private TaxonDescription description;
-
+ private final TaxonNode newAcceptedTaxonNode;
+
+ private final TaxonDescription description;
+
/**
* <p>Constructor for ChangeAcceptedTaxonToSynonymOperation.</p>
*
* @param conversationEnabled a {@link eu.etaxonomy.cdm.api.conversation.IConversationEnabled} object.
*/
public MoveDescriptionToOtherTaxonOperation(String label,
- IUndoContext undoContext, TaxonDescription description, TaxonNode targetTaxonNode,
- IPostOperationEnabled postOperationEnabled, IConversationEnabled conversationEnabled) {
- super(label, undoContext, postOperationEnabled, conversationEnabled); // FIXME is this the right constructor ???
+ IUndoContext undoContext,
+ TaxonDescription description,
+ TaxonNode targetTaxonNode,
+ IPostOperationEnabled postOperationEnabled,
+ IConversationEnabled conversationEnabled,
+ ICdmEntitySessionEnabled cdmEntitySessionEnabled) {
+ super(label, undoContext, postOperationEnabled, conversationEnabled, cdmEntitySessionEnabled); // FIXME is this the right constructor ???
this.description = description;
this.newAcceptedTaxonNode = targetTaxonNode;
}
monitor.worked(20);
bind();
-
+
String moveMessage = String.format("Description moved from %s", EditorUtil.getActiveMultiPageTaxonEditor().getTaxon());
if(description.isProtectedTitleCache()){
String separator = "";
annotation.setAnnotationType(AnnotationType.TECHNICAL());
description.addAnnotation(annotation);
newAcceptedTaxonNode.getTaxon().addDescription(description);
- CdmStore.getService(IDescriptionService.class).saveOrUpdate(description);
+ if (CdmApplicationState.getCurrentAppConfig() instanceof CdmApplicationRemoteController) {
+ CdmStore.getService(IDescriptionService.class).merge(description);
+ } else {
+ CdmStore.getService(IDescriptionService.class).saveOrUpdate(description);
+ }
+
+ // CdmStore.getService(IDescriptionService.class).moveTaxonDescription(description.getUuid(), newAcceptedTaxonNode.getTaxon().getUuid());
monitor.worked(40);
-
+
return postExecute(description);
}
import org.eclipse.swt.widgets.Control;
import org.eclipse.swt.widgets.Menu;
import org.eclipse.swt.widgets.Tree;
-import org.eclipse.ui.IEditorInput;
-import org.eclipse.ui.IEditorPart;
import org.eclipse.ui.IWorkbenchActionConstants;
import org.eclipse.ui.IWorkbenchPart;
+import eu.etaxonomy.cdm.model.description.IDescribable;
import eu.etaxonomy.cdm.model.occurrence.SpecimenOrObservationBase;
import eu.etaxonomy.taxeditor.bulkeditor.BulkEditor;
-import eu.etaxonomy.taxeditor.editor.MultiPageTaxonEditor;
+import eu.etaxonomy.taxeditor.editor.view.descriptive.DescriptiveViewPart;
import eu.etaxonomy.taxeditor.model.AbstractUtility;
import eu.etaxonomy.taxeditor.model.IPartContentHasDetails;
import eu.etaxonomy.taxeditor.model.IPartContentHasMedia;
return;
}
- if(part instanceof DetailsViewPart || part instanceof SupplementalDataViewPart){
- // do not show empty page as these views are also used to edit the description selected in this view
+ if (part instanceof DetailsViewPart || part instanceof SupplementalDataViewPart
+ || part instanceof DescriptiveViewPart) {
+ // do not show empty page as these views are also used to edit the
+ // description selected in this view
return;
}
if(part instanceof IPartContentHasMedia && ((IPartContentHasMedia) part).canAttachMedia()){
- if(part instanceof MultiPageTaxonEditor){
- IEditorInput input = ((IEditorPart) part).getEditorInput();
- showViewer(part, new StructuredSelection(input));
- return;
- }
- else if(selection instanceof IStructuredSelection){
+ if(selection instanceof IStructuredSelection){
Object firstElement = ((IStructuredSelection) selection).getFirstElement();
if(firstElement instanceof TreeNode){
showViewer(part, new StructuredSelection(((TreeNode) firstElement).getValue()));
return;
}
- else if(firstElement!=null){
+ else if(firstElement!=null
+ && firstElement instanceof IDescribable<?>){
showViewer(part, (IStructuredSelection) selection);
return;
}
+++ /dev/null
-### ************ APPENDER ***********************************###\r
-\r
-### direct log messages to stdout ###\r
-log4j.appender.stdout=org.apache.log4j.ConsoleAppender\r
-log4j.appender.stdout.Target=System.out\r
-log4j.appender.stdout.layout=org.apache.log4j.PatternLayout\r
-log4j.appender.stdout.layout.ConversionPattern=%d{ABSOLUTE} %5p %c{1}:%L - %m%n\r
-\r
-### direct messages to file hibernate.log ###\r
-log4j.appender.file=org.apache.log4j.FileAppender\r
-log4j.appender.file.File=taxeditor.log\r
-log4j.appender.file.layout=org.apache.log4j.PatternLayout\r
-log4j.appender.file.layout.ConversionPattern=%d{ABSOLUTE} %5p %c{1}:%L - %m%n\r
-\r
-### ************* LOG LEVELS *********************************###\r
-\r
-### set log levels - for more verbose logging change 'info' to 'debug' ###\r
-### levels: error, warn, debug, info\r
-log4j.rootLogger=INFO, stdout\r
-\r
-### set directory-specific levels below\r
-\r
-### basic level for editor directory\r
-log4j.logger.eu.etaxonomy.taxeditor.editor = WARN, stdout \r
-\r
-log4j.logger.eu.etaxonomy.taxeditor.editor.handler = DEBUG, stdout\r
-\r
-### log level for conversation handler\r
-#log4j.logger.eu.etaxonomy.cdm.api.application = DEBUG, stdout\r
-\r
-log4j.logger.org.springframework.orm.hibernate3 = WARN, stdout \r
-\r
-\r
// $Id$
/**
* Copyright (C) 2007 EDIT
-* European Distributed Institute of Taxonomy
+* European Distributed Institute of Taxonomy
* http://www.e-taxonomy.eu
-*
+*
* The contents of this file are subject to the Mozilla Public License Version 1.1
* See LICENSE.TXT at the top of this package for the full license terms.
*/
import eu.etaxonomy.cdm.model.name.HomotypicalGroup;
import eu.etaxonomy.cdm.model.name.NonViralName;
-import eu.etaxonomy.cdm.model.name.TaxonNameBase;
import eu.etaxonomy.cdm.model.taxon.SynonymRelationship;
import eu.etaxonomy.cdm.model.taxon.SynonymRelationshipType;
import eu.etaxonomy.cdm.model.taxon.Taxon;
-import eu.etaxonomy.taxeditor.editor.name.operation.CreateSynonymInExistingHomotypicalGroupOperation;
import eu.etaxonomy.taxeditor.store.operations.AbstractTaxeditorOperationTestBase;
/**
*/
public class CreateSynonymInExisitingHomotypicalGroupOperationTest extends AbstractTaxeditorOperationTestBase {
- private TaxonNameBase newSynonymName;
+ private NonViralName newSynonymName;
private HomotypicalGroup homotypicalGroup;
private NonViralName<?> taxonName;
-
+
/**
* @throws java.lang.Exception
*/
@Before
public void setUp() throws Exception {
-
+
taxonName = NonViralName.NewInstance(null);
taxon = Taxon.NewInstance(taxonName, null);
-
+
homotypicalGroup = HomotypicalGroup.NewInstance();
newSynonymName = NonViralName.NewInstance(null);
-
+
operation = new CreateSynonymInExistingHomotypicalGroupOperation("Create Synonym In Existing Homotypical Group",
undoContext, taxon, homotypicalGroup, newSynonymName, postOperation);
}
/**
* Test method for {@link eu.etaxonomy.taxeditor.editor.name.operation.CreateSynonymInExistingHomotypicalGroupOperation#execute(org.eclipse.core.runtime.IProgressMonitor, org.eclipse.core.runtime.IAdaptable)}.
- *
+ *
* Homotypic group is the Taxons homotypic group, so we expect the synonym to be homotypic to the accepted taxon.
- *
- * @throws ExecutionException
+ *
+ * @throws ExecutionException
*/
@Test
- public void testExecuteTaxonHomotypicGroup() throws ExecutionException {
+ public void testExecuteTaxonHomotypicGroup() throws ExecutionException {
homotypicalGroup.addTypifiedName(taxonName);
operation.execute(monitor, info);
-
+
Assert.assertTrue("Taxon should have a synonym now.", taxon.getSynonyms().size() > 0);
Assert.assertTrue("Taxon should have a homotypic synonym now", taxon.getHomotypicSynonymsByHomotypicGroup().size() > 0);
}
-
+
/**
* Test method for {@link eu.etaxonomy.taxeditor.editor.name.operation.CreateSynonymInExistingHomotypicalGroupOperation#execute(org.eclipse.core.runtime.IProgressMonitor, org.eclipse.core.runtime.IAdaptable)}.
- *
+ *
* Homotypic group is not the accepted taxons. Heterotypic synonym should be created.
- *
- * @throws ExecutionException
+ *
+ * @throws ExecutionException
*/
@Test
- public void testExecuteSynonymHomotypicGroup() throws ExecutionException {
+ public void testExecuteSynonymHomotypicGroup() throws ExecutionException {
// test heterotypic synonym
operation.execute(monitor, info);
-
+
Assert.assertTrue("Taxon should have a synonym now.", taxon.getSynonyms().size() > 0);
Assert.assertTrue("Taxon should have a homotypic group", taxon.getHomotypicSynonymyGroups().size() > 0);
Assert.assertEquals("Synonym relationship should be heterotypic", SynonymRelationshipType.HETEROTYPIC_SYNONYM_OF(), taxon.getSynonymRelations().toArray(new SynonymRelationship[0])[0].getType());
}
-
+
/**
* Test method for {@link eu.etaxonomy.taxeditor.editor.name.operation.CreateSynonymInExistingHomotypicalGroupOperation#undo(org.eclipse.core.runtime.IProgressMonitor, org.eclipse.core.runtime.IAdaptable)}.
- * @throws ExecutionException
+ * @throws ExecutionException
*/
@Test
public void testUndoTaxonHomotypicGroup() throws ExecutionException {
homotypicalGroup.addTypifiedName(taxonName);
-
+
operation.execute(monitor, info);
operation.undo(monitor, info);
-
+
Assert.assertTrue("There should not be synonym relationships for the taxon", taxon.getSynonyms().size() == 0);
}
-
+
/**
* Test method for {@link eu.etaxonomy.taxeditor.editor.name.operation.CreateSynonymInExistingHomotypicalGroupOperation#undo(org.eclipse.core.runtime.IProgressMonitor, org.eclipse.core.runtime.IAdaptable)}.
- * @throws ExecutionException
+ * @throws ExecutionException
*/
@Test
public void testUndoSynonymHomotypicGroup() throws ExecutionException {
operation.execute(monitor, info);
operation.undo(monitor, info);
-
+
Assert.assertTrue("There should not be synonym relationships for the taxon", taxon.getSynonyms().size() == 0);
}
/**
* Test method for {@link eu.etaxonomy.taxeditor.editor.name.operation.CreateSynonymInExistingHomotypicalGroupOperation#redo(org.eclipse.core.runtime.IProgressMonitor, org.eclipse.core.runtime.IAdaptable)}.
- * @throws ExecutionException
+ * @throws ExecutionException
*/
@Test
public void testRedoTaxonHomotypicGroup() throws ExecutionException {
homotypicalGroup.addTypifiedName(taxonName);
-
+
operation.execute(monitor, info);
- operation.undo(monitor, info);
+ operation.undo(monitor, info);
operation.redo(monitor, info);
-
+
Assert.assertTrue("Taxon should have a synonym now.", taxon.getSynonyms().size() > 0);
Assert.assertTrue("Taxon should have a homotypic synonym now", taxon.getHomotypicSynonymsByHomotypicGroup().size() > 0);
}
-
+
/**
* Test method for {@link eu.etaxonomy.taxeditor.editor.name.operation.CreateSynonymInExistingHomotypicalGroupOperation#redo(org.eclipse.core.runtime.IProgressMonitor, org.eclipse.core.runtime.IAdaptable)}.
- * @throws ExecutionException
+ * @throws ExecutionException
*/
@Test
public void testRedoSynonymHomotypicGroup() throws ExecutionException {
operation.execute(monitor, info);
- operation.undo(monitor, info);
+ operation.undo(monitor, info);
operation.redo(monitor, info);
-
+
Assert.assertTrue("Taxon should have a synonym now.", taxon.getSynonyms().size() > 0);
Assert.assertTrue("Taxon should have a homotypic group", taxon.getHomotypicSynonymyGroups().size() > 0);
Assert.assertEquals("Synonym relationship should be heterotypic", SynonymRelationshipType.HETEROTYPIC_SYNONYM_OF(), taxon.getSynonymRelations().toArray(new SynonymRelationship[0])[0].getType());
// $Id$
/**
* Copyright (C) 2007 EDIT
-* European Distributed Institute of Taxonomy
+* European Distributed Institute of Taxonomy
* http://www.e-taxonomy.eu
-*
+*
* The contents of this file are subject to the Mozilla Public License Version 1.1
* See LICENSE.TXT at the top of this package for the full license terms.
*/
private static DescriptionElementBase descriptionElement;
private static TaxonDescription description;
-
+
/**
* @throws java.lang.Exception
*/
public static void setUpBeforeClass() throws Exception {
taxon = Taxon.NewInstance(null, null);
descriptionElement = TextData.NewInstance();
-
+
description = TaxonDescription.NewInstance();
-
+
description.addElement(descriptionElement);
-
+
taxon.addDescription(description);
-
-
- operation = new DeleteDescriptionElementOperation("", undoContext, descriptionElement, postOperation);
+
+
+ operation = new DeleteDescriptionElementOperation("", undoContext, descriptionElement, postOperation, cdmEntitySessionEnabled);
}
/**
* Test method for {@link eu.etaxonomy.taxeditor.editor.view.descriptive.operation.DeleteDescriptionElementOperation#execute(org.eclipse.core.runtime.IProgressMonitor, org.eclipse.core.runtime.IAdaptable)}.
- * @throws ExecutionException
+ * @throws ExecutionException
*/
@Test
public void testExecuteIProgressMonitorIAdaptable() throws ExecutionException {
operation.execute(monitor, info);
-
+
Assert.assertTrue(taxon.getDescriptions().toArray(new TaxonDescription[0])[0].getElements().size() == 0);
}
/**
* Test method for {@link eu.etaxonomy.taxeditor.editor.view.descriptive.operation.DeleteDescriptionElementOperation#undo(org.eclipse.core.runtime.IProgressMonitor, org.eclipse.core.runtime.IAdaptable)}.
- * @throws ExecutionException
+ * @throws ExecutionException
*/
@Test
public void testUndoIProgressMonitorIAdaptable() throws ExecutionException {
operation.undo(monitor, info);
-
+
Assert.assertTrue(taxon.getDescriptions().toArray(new TaxonDescription[0])[0].getElements().size() > 0);
Assert.assertEquals(descriptionElement, taxon.getDescriptions().toArray(new TaxonDescription[0])[0].getElements().toArray(new DescriptionElementBase[0])[0]);
}
/**
* Test method for {@link eu.etaxonomy.taxeditor.editor.view.descriptive.operation.DeleteDescriptionElementOperation#redo(org.eclipse.core.runtime.IProgressMonitor, org.eclipse.core.runtime.IAdaptable)}.
- * @throws ExecutionException
+ * @throws ExecutionException
*/
@Test
public void testRedoIProgressMonitorIAdaptable() throws ExecutionException {
operation.redo(monitor, info);
-
+
Assert.assertTrue(taxon.getDescriptions().toArray(new TaxonDescription[0])[0].getElements().size() == 0);
}
}
/**
* Copyright (C) 2007 EDIT
-* European Distributed Institute of Taxonomy
+* European Distributed Institute of Taxonomy
* http://www.e-taxonomy.eu
-*
+*
* The contents of this file are subject to the Mozilla Public License Version 1.1
* See LICENSE.TXT at the top of this package for the full license terms.
*/
import eu.etaxonomy.cdm.model.taxon.Taxon;
import eu.etaxonomy.cdm.model.taxon.TaxonRelationship;
import eu.etaxonomy.cdm.model.taxon.TaxonRelationshipType;
-import eu.etaxonomy.taxeditor.editor.name.operation.SwapSynonymAndAcceptedOperation;
import eu.etaxonomy.taxeditor.operation.AbstractPostOperation;
import eu.etaxonomy.taxeditor.store.operations.AbstractTaxeditorOperationTestBase;
public class SwapSynonymAndAcceptedOperationTest extends AbstractTaxeditorOperationTestBase {
private static final Logger logger = Logger
.getLogger(SwapSynonymAndAcceptedOperationTest.class);
-
+
private static AbstractPostOperation operation;
private static Taxon taxon;
private static NonViralName<?> oldTaxonName;
-
+
/**
* @throws java.lang.Exception
*/
@BeforeClass
public static void setUpBeforeClass() throws Exception {
-
+
(new DefaultTermInitializer()).initialize();
-
+
// Create the original accepted taxon
oldTaxonName = NonViralName.NewInstance(null);
taxon = Taxon.NewInstance(oldTaxonName, null);
-
+
// Create its parent taxon
parentTaxon = Taxon.NewInstance(NonViralName.NewInstance(null), null);
parentTaxon.addTaxonomicChild(taxon, null, null);
// Give it a child taxon
childTaxon = Taxon.NewInstance(NonViralName.NewInstance(null), null);
childTaxon.setTaxonomicParent(taxon, null, null);
-
+
// Create a homotypic synonym for the accepted taxon
taxon.addHomotypicSynonymName(NonViralName.NewInstance(null), null, null);
// homotypicSynonym = Synonym.NewInstance(NonViralName.NewInstance(null), null);
// HomotypicalGroup acceptedHomotypicalGroup = HomotypicalGroup.NewInstance();
// acceptedHomotypicalGroup.addTypifiedName(oldTaxon.getName());
// acceptedHomotypicalGroup.addTypifiedName(homotypicSynonym.getName());
-
+
// Create a heterotypic synonym that will be used to create the new accepted taxon
oldSynonymName = NonViralName.NewInstance(null);
oldHeterotypicSynonym = Synonym.NewInstance(oldSynonymName, null);
heteroypicalGroup = HomotypicalGroup.NewInstance();
heteroypicalGroup.addTypifiedName(oldHeterotypicSynonym.getName());
taxon.addSynonym(oldHeterotypicSynonym, SynonymRelationshipType.HETEROTYPIC_SYNONYM_OF());
-
+
// Create a misapplication
misapplication = Taxon.NewInstance(NonViralName.NewInstance(null), null);
- taxon.addMisappliedName(misapplication, null, null);
-
+ taxon.addMisappliedName(misapplication, null, null);
+
// Create a concept relation
concept = Taxon.NewInstance(NonViralName.NewInstance(null), null);
conceptRelationshipType = TaxonRelationshipType.CONGRUENT_TO();
- concept.addTaxonRelation(taxon, conceptRelationshipType, null, null);
-
+ concept.addTaxonRelation(taxon, conceptRelationshipType, null, null);
+
// Create a description
description = TaxonDescription.NewInstance();
taxon.addDescription(description);
-
+
operation = new SwapSynonymAndAcceptedOperation
- (null, undoContext, taxon, oldHeterotypicSynonym, postOperation);
+ (null, undoContext, taxon, oldHeterotypicSynonym, postOperation, cdmEntitySessionEnabled);
}
/**
* Test method for {@link eu.etaxonomy.taxeditor.editor.name.operation.ChangeHomotypicGroupOperation#execute(org.eclipse.core.runtime.IProgressMonitor, org.eclipse.core.runtime.IAdaptable)}.
- * @throws ExecutionException
+ * @throws ExecutionException
*/
@Test
public void testExecute() throws ExecutionException {
operation.execute(null, null);
-
- // New taxon has correct name?
+
+ // New taxon has correct name?
Assert.assertEquals(taxon.getName(), oldSynonymName);
-
+
// New taxon has correct parent?
Assert.assertEquals(taxon.getTaxonomicParent(), parentTaxon);
-
+
// New taxon has correct child?
Assert.assertTrue(taxon.getTaxonomicChildren().contains(childTaxon));
-
+
// New taxon has 2 synonyms?
Assert.assertEquals(taxon.getSynonyms().size(), 2);
-
+
// New taxon has a synonym with the name of the previous accepted taxon?
Assert.assertTrue(taxon.getSynonymNames().contains(oldTaxonName));
-
+
// New taxon has misapplication?
Assert.assertTrue(taxon.getMisappliedNames().contains(misapplication));
-
+
// New taxon has 1 concept relation?
int conceptRelCount = 0;
for (TaxonRelationship relation : taxon.getTaxonRelations()) {
conceptRelCount++;
}
Assert.assertEquals(conceptRelCount, 1);
-
+
// New taxon has description?
taxon.getDescriptions().contains(description);
}
/**
* Test method for {@link eu.etaxonomy.taxeditor.editor.name.operation.ChangeHomotypicGroupOperation#undo(org.eclipse.core.runtime.IProgressMonitor, org.eclipse.core.runtime.IAdaptable)}.
- * @throws ExecutionException
+ * @throws ExecutionException
*/
@Test
public void testUndo() throws ExecutionException {
operation.undo(null, null);
-
+
// Assert.assertEquals(oldHomotypicalGroup, synonym.getHomotypicGroup());
}
-
+
/**
* Test method for {@link eu.etaxonomy.taxeditor.editor.name.operation.ChangeHomotypicGroupOperation#redo(org.eclipse.core.runtime.IProgressMonitor, org.eclipse.core.runtime.IAdaptable)}.
- * @throws ExecutionException
+ * @throws ExecutionException
*/
@Test
public void testRedo() throws ExecutionException {
operation.redo(null, null);
-
+
// Assert.assertEquals(newHomotypicalGroup, synonym.getHomotypicGroup());
}
<feature
id="eu.etaxonomy.taxeditor.feature.platform"
label="Taxeditor Dependencies"
- version="3.8.1"
+ version="3.12.0.qualifier"
os="linux,macosx,win32"
ws="cocoa,gtk,win32"
arch="x86,x86_64">
<parent>
<groupId>eu.etaxonomy</groupId>
<artifactId>taxeditor-parent</artifactId>
- <version>3.8.1</version>
+ <version>3.12.0-SNAPSHOT</version>
</parent>
<modelVersion>4.0.0</modelVersion>
<artifactId>eu.etaxonomy.taxeditor.feature.platform</artifactId>
<feature
id="eu.etaxonomy.taxeditor.feature"
label="Taxonomic Editor"
- version="3.8.1"
+ version="3.12.0.qualifier"
provider-name="EDIT"
plugin="eu.etaxonomy.taxeditor.application"
os="linux,macosx,win32"
<parent>
<groupId>eu.etaxonomy</groupId>
<artifactId>taxeditor-parent</artifactId>
- <version>3.8.1</version>
+ <version>3.12.0-SNAPSHOT</version>
</parent>
<modelVersion>4.0.0</modelVersion>
<artifactId>eu.etaxonomy.taxeditor.feature</artifactId>
Bundle-ManifestVersion: 2
Bundle-Name: Help
Bundle-SymbolicName: eu.etaxonomy.taxeditor.help; singleton:=true
-Bundle-Version: 3.8.1
+Bundle-Version: 3.12.0.qualifier
Bundle-Activator: eu.etaxonomy.taxeditor.help.Activator
Bundle-Vendor: EDIT
Require-Bundle: org.eclipse.ui,
<parent>
<groupId>eu.etaxonomy</groupId>
<artifactId>taxeditor-parent</artifactId>
- <version>3.8.1</version>
+ <version>3.12.0-SNAPSHOT</version>
</parent>
<modelVersion>4.0.0</modelVersion>
Bundle-ManifestVersion: 2
Bundle-Name: eu.etaxonomy.taxeditor.molecular.lib
Bundle-SymbolicName: eu.etaxonomy.taxeditor.molecular.lib;singleton:=true
-Bundle-Version: 3.8.1
+Bundle-Version: 3.12.0.qualifier
Bundle-ClassPath: .,
lib/bioinfweb-commons-bio-2-SNAPSHOT.jar,
lib/bioinfweb-commons-core-2-SNAPSHOT.jar,
<parent>
<groupId>eu.etaxonomy</groupId>
<artifactId>taxeditor-parent</artifactId>
- <version>3.8.1</version>
+ <version>3.12.0-SNAPSHOT</version>
</parent>
<build>
Bundle-ManifestVersion: 2
Bundle-Name: Molecular Bundle
Bundle-SymbolicName: eu.etaxonomy.taxeditor.molecular;singleton:=true
-Bundle-Version: 3.8.1
+Bundle-Version: 3.12.0.qualifier
Bundle-Activator: eu.etaxonomy.taxeditor.molecular.TaxeditorMolecularPlugin
Require-Bundle: org.eclipse.ui,
org.eclipse.core.runtime,
<parent>
<groupId>eu.etaxonomy</groupId>
<artifactId>taxeditor-parent</artifactId>
- <version>3.8.1</version>
+ <version>3.12.0-SNAPSHOT</version>
</parent>
<modelVersion>4.0.0</modelVersion>
//re-loading sequence to avoid session conflicts
Sequence sequenceNode = CdmStore.getService(ISequenceService.class).load(((AlignmentEditorInput)getEditorInput()).getSequenceNodeUuid());
+ ((AlignmentEditorInput)getEditorInput()).setSequenceNode(sequenceNode);
StringAdapter stringProvider = new StringAdapter(getEditableConsensusArea().getAlignmentModel(), false); // Throws an exception if a token has more than one character.
// Write consensus sequence:
}
monitor.worked(1);
+ ((AlignmentEditorInput)getEditorInput()).merge();
// Commit the conversation and start a new transaction immediately:
conversationHolder.commit(true);
monitor.worked(1);
if(conversationHolder!=null){
conversationHolder.bind();
}
+ ((AlignmentEditorInput)getEditorInput()).bind();
}
+ @Override
+ public void dispose() {
+ ((AlignmentEditorInput)getEditorInput()).dispose();
+ }
public boolean isInsertMode() {
return getAlignmentsContainer().getEditSettings().isInsert();
package eu.etaxonomy.taxeditor.molecular.editor;
+import java.util.Arrays;
+import java.util.List;
import java.util.UUID;
import org.eclipse.jface.resource.ImageDescriptor;
import org.eclipse.ui.IEditorInput;
import org.eclipse.ui.IPersistableElement;
+import eu.etaxonomy.cdm.api.service.molecular.ISequenceService;
+import eu.etaxonomy.cdm.model.molecular.Sequence;
+import eu.etaxonomy.taxeditor.editor.CdmEntitySessionInput;
+import eu.etaxonomy.taxeditor.store.CdmStore;
+
/**
* @author Ben Stöver
* @date 04.08.2014
*/
-public class AlignmentEditorInput implements IEditorInput {
+public class AlignmentEditorInput extends CdmEntitySessionInput implements IEditorInput {
private static final String name = "AlignmentEditor";
private final UUID sequenceNodeUuid;
-
+ private Sequence sequenceNode;
public AlignmentEditorInput(UUID sequenceNodeUuid) {
- super();
+ super(false);
this.sequenceNodeUuid = sequenceNodeUuid;
+ initSession();
}
}
return true;
}
+
+
+ public void setSequenceNode(Sequence sequenceNode) {
+ this.sequenceNode = sequenceNode;
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled#getRootEntities()
+ */
+ @Override
+ public List<Sequence> getRootEntities() {
+ return Arrays.asList(sequenceNode);
+ }
+
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.editor.CdmEntitySessionInput#merge()
+ */
+ @Override
+ public void merge() {
+ if(CdmStore.getCurrentSessionManager().isRemoting()) {
+ CdmStore.getService(ISequenceService.class).merge(sequenceNode, true);
+ }
+ }
}
Bundle-ManifestVersion: 2
Bundle-Name: Navigation Bundle
Bundle-SymbolicName: eu.etaxonomy.taxeditor.navigation;singleton:=true
-Bundle-Version: 3.8.1
+Bundle-Version: 3.12.0.qualifier
Bundle-Vendor: EDIT
Export-Package: eu.etaxonomy.cdm,
eu.etaxonomy.taxeditor.navigation,
eu.etaxonomy.taxeditor.navigation.internal,
eu.etaxonomy.taxeditor.navigation.key.polytomous,
+ eu.etaxonomy.taxeditor.navigation.key.polytomous.operation,
eu.etaxonomy.taxeditor.navigation.navigator,
+ eu.etaxonomy.taxeditor.navigation.navigator.operation,
eu.etaxonomy.taxeditor.navigation.search
Require-Bundle: org.eclipse.ui,
org.eclipse.ui.navigator,
SearchBar_0=Use "*" for wildcard searching\r
SearchBar_1=Search\r
SearchBar_2=Could not execute search\r
-SearchBar_3=Please type at least one character when using the "*" wildcard.\r
+SearchBar_3=Please type at least one character\r
SearchBar_4=Error opening search result.\r
SearchBar_6=Taxa\r
SearchBar_7=Synonyms\r
SearchBar_0=Benutze "*" f\u00FCr Platzhalter-Suche\r
SearchBar_1=Suche\r
SearchBar_2=Suche konnte nicht ausgef\u00FChrt werden\r
-SearchBar_3=Bitte geben Sie mindestens ein Zeichen ein, wenn Sie den "*" Platzhalter benutzen wollen\r
+SearchBar_3=Bitte geben Sie mindestens einen Buchstaben ein\r
SearchBar_4=Fehler beim f\u00fcffnen des Suchergebnisses\r
SearchBar_6=Taxa\r
SearchBar_7=Synonyme\r
<dynamic
class="eu.etaxonomy.taxeditor.navigation.RecentNamesContributionItem"
id="eu.etaxonomy.taxeditor.navigation.recentnames">
+ <visibleWhen
+ checkEnabled="true">
+ <reference
+ definitionId="isCdmStoreConnected">
+ </reference>
+ </visibleWhen>
</dynamic>
</menuContribution>
<menuContribution
name="org.eclipse.ui.views.showView.viewId"
value="eu.etaxonomy.taxeditor.navigation.navigator">
</parameter>
+ <visibleWhen
+ checkEnabled="true">
+ <reference
+ definitionId="isCdmStoreConnected">
+ </reference>
+ </visibleWhen>
</command>
<command
commandId="org.eclipse.ui.views.showView"
name="org.eclipse.ui.views.showView.viewId"
value="eu.etaxonomy.taxeditor.navigation.key.polytomous.polytomousKeyViewPart">
</parameter>
+ <visibleWhen
+ checkEnabled="true">
+ <reference
+ definitionId="isCdmStoreConnected">
+ </reference>
+ </visibleWhen>
</command>
</menuContribution>
<menuContribution
commandId="eu.etaxonomy.taxeditor.navigation.command.create.taxonNode"
label="%command.label.13"
style="push">
+ <visibleWhen
+ checkEnabled="true">
+ <reference
+ definitionId="isCdmStoreConnected">
+ </reference>
+ </visibleWhen>
</command>
<separator
name="eu.etaxonomy.navigation.menu.new.separator1"
id="eu.etaxonomy.taxeditor.navigation.create.classificationHandler"
label="%command.label.14"
style="push">
+ <visibleWhen
+ checkEnabled="true">
+ <reference
+ definitionId="isCdmStoreConnected">
+ </reference>
+ </visibleWhen>
</command>
</menuContribution>
<menuContribution
</with>
</activeWhen>
</handler>
+ <handler
+ class="eu.etaxonomy.taxeditor.navigation.navigator.handler.RemotingChangeAcceptedTaxonToSynonymHandler"
+ commandId="eu.etaxonomy.taxeditor.navigator.command.update.changeAcceptedToSynonym">
+ <activeWhen>
+ <reference
+ definitionId="isRemoting">
+ </reference>
+ </activeWhen>
+ </handler>
+ <handler
+ class="eu.etaxonomy.taxeditor.navigation.navigator.handler.RemotingMoveFactualDataHandler"
+ commandId="eu.etaxonomy.taxeditor.navigation.moveFactualData">
+ <activeWhen>
+ <reference
+ definitionId="isRemoting">
+ </reference>
+ </activeWhen>
+ </handler>
+ <handler
+ class="eu.etaxonomy.taxeditor.navigation.navigator.handler.RemotingMoveTaxonNodeHandler"
+ commandId="eu.etaxonomy.taxeditor.navigation.command.update.moveTaxon">
+ <activeWhen>
+ <reference
+ definitionId="isRemoting">
+ </reference>
+ </activeWhen>
+ </handler>
+ <handler
+ class="eu.etaxonomy.taxeditor.navigation.navigator.handler.RemotingDeleteTaxonNodeHandler"
+ commandId="eu.etaxonomy.taxeditor.navigation.command.delete">
+ <activeWhen>
+ <reference
+ definitionId="isRemoting">
+ </reference>
+ </activeWhen>
+ </handler>
+ <handler
+ class="eu.etaxonomy.taxeditor.navigation.key.polytomous.handler.RemotingDeletePolytomousKeyHandler"
+ commandId="eu.etaxonomy.taxeditor.navigation.key.polytomous.command.delete">
+ <activeWhen>
+ <reference
+ definitionId="isRemoting">
+ </reference>
+ </activeWhen>
+ </handler>
+ <handler
+ class="eu.etaxonomy.taxeditor.navigation.key.polytomous.handler.RemotingUpdatePolytomousKeyAllNodesHandler"
+ commandId="eu.etaxonomy.taxeditor.navigation.key.polytomous.refreshKeyNodes">
+ <activeWhen>
+ <reference
+ definitionId="isRemoting">
+ </reference>
+ </activeWhen>
+ </handler>
+ <handler
+ class="eu.etaxonomy.taxeditor.navigation.key.polytomous.handler.RemotingEditPolytomousKeyNodesHandler"
+ commandId="eu.etaxonomy.taxeditor.navigation.key.polytomous.editNodes">
+ <activeWhen>
+ <reference
+ definitionId="isRemoting">
+ </reference>
+ </activeWhen>
+ </handler>
</extension>
class="eu.etaxonomy.taxeditor.preference.CdmStorePropertyTester"
id="eu.etaxonomy.taxeditor.preference.CdmStorePropertyTester"
namespace="eu.etaxonomy.taxeditor.preference.CdmStorePropertyTester"
- properties="isCdmStoreConnected"
+ properties="isCdmStoreConnected,isRemoting,isStandAlone"
type="java.lang.Object">
</propertyTester>
</extension>
</test>
</with>
</definition>
+ <definition
+ id="isRemoting">
+ <test
+ property="eu.etaxonomy.taxeditor.preference.CdmStorePropertyTester.isRemoting">
+ </test>
+ </definition>
+ <definition
+ id="isStandAlone">
+ <test
+ property="eu.etaxonomy.taxeditor.preference.CdmStorePropertyTester.isStandAlone">
+ </test>
+ </definition>
</extension>
<extension
point="eu.etaxonomy.taxeditor.store.cdmViewer">
<parent>
<groupId>eu.etaxonomy</groupId>
<artifactId>taxeditor-parent</artifactId>
- <version>3.8.1</version>
+ <version>3.12.0-SNAPSHOT</version>
</parent>
<modelVersion>4.0.0</modelVersion>
import eu.etaxonomy.taxeditor.model.MessagingUtils;
import eu.etaxonomy.taxeditor.navigation.internal.TaxeditorNavigationPlugin;
import eu.etaxonomy.taxeditor.navigation.navigator.TaxonNavigator;
+import eu.etaxonomy.taxeditor.store.internal.TaxeditorStorePlugin;
/**
* <p>NavigationUtil class.</p>
} catch (PartInitException e) {
MessagingUtils.error(NavigationUtil.class, "Error opening the editor", e);
} catch (Exception e) {
- MessagingUtils.warningDialog("Could not create Taxon", NavigationUtil.class, e.getMessage());
+ MessagingUtils.errorDialog("Could not create Taxon",
+ NavigationUtil.class,
+ e.getMessage(), TaxeditorStorePlugin.PLUGIN_ID,
+ e,
+ true);
+
}
}
--- /dev/null
+// $Id$
+/**
+* Copyright (C) 2015 EDIT
+* European Distributed Institute of Taxonomy
+* http://www.e-taxonomy.eu
+*
+* The contents of this file are subject to the Mozilla Public License Version 1.1
+* See LICENSE.TXT at the top of this package for the full license terms.
+*/
+package eu.etaxonomy.taxeditor.navigation.key.polytomous;
+
+/**
+ * @author cmathew
+ * @date 25 Jun 2015
+ *
+ */
+public interface PolytomousKeyViewLabels {
+
+ public static final String DELETE_POLYTOMOUS_KEY_LABEL = "Delete Polytomous Key";
+ public static final String UPDATE_ALL_POLYTOMOUS_KEY_NODES_LABEL = "Update All Polytomous Key Nodes";
+
+ public static final String ERROR_OPENING_KEY_EDITOR_MESSAGE = "Error opening Polytomous Key Editor";
+
+
+}
package eu.etaxonomy.taxeditor.navigation.key.polytomous;
import java.util.List;
+import java.util.Map;
import org.eclipse.core.commands.Command;
import org.eclipse.core.commands.common.NotDefinedException;
import org.eclipse.ui.handlers.IHandlerService;
import org.eclipse.ui.part.ViewPart;
+import eu.etaxonomy.cdm.api.application.CdmApplicationState;
+import eu.etaxonomy.cdm.api.application.CdmChangeEvent;
+import eu.etaxonomy.cdm.api.application.CdmChangeEvent.Action;
+import eu.etaxonomy.cdm.api.application.ICdmChangeListener;
import eu.etaxonomy.cdm.api.conversation.ConversationHolder;
import eu.etaxonomy.cdm.api.conversation.IConversationEnabled;
import eu.etaxonomy.cdm.api.service.IPolytomousKeyService;
import eu.etaxonomy.taxeditor.model.IContextListener;
import eu.etaxonomy.taxeditor.model.MessagingUtils;
import eu.etaxonomy.taxeditor.operation.IPostOperationEnabled;
+import eu.etaxonomy.taxeditor.session.ICdmEntitySession;
+import eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled;
import eu.etaxonomy.taxeditor.store.CdmStore;
import eu.etaxonomy.taxeditor.ui.element.CdmFormFactory;
*
*/
public class PolytomousKeyViewPart extends ViewPart implements
- IConversationEnabled, IPostOperationEnabled {
+ IConversationEnabled, ICdmEntitySessionEnabled, IPostOperationEnabled,
+ ICdmChangeListener {
private class FilterModifyListener implements ModifyListener{
@Override
private IContextListener contextListener;
private final CdmFormFactory formFactory;
private Text text_filter;
+ private ICdmEntitySession cdmEntitySession;
private PolytomousKeyViewPartDataChangeBehavior dataChangeBehavior;
private void setInput() {
conversation = CdmStore.createConversation();
conversation.registerForDataStoreChanges(this);
+ cdmEntitySession = CdmStore.getCurrentSessionManager().newSession(this, true);
+ CdmApplicationState.getCurrentDataChangeService().register(this);
+
List<PolytomousKey> input = CdmStore.getService(IPolytomousKeyService.class).list(PolytomousKey.class, null, null, null, null);
if(!viewer.getControl().isDisposed()){
viewer.setInput(input);
*/
@Override
public void setFocus() {
+ if(cdmEntitySession != null) {
+ cdmEntitySession.bind();
+ }
viewer.getControl().setFocus();
}
conversation.close();
CdmStore.getContextManager().removeContextListener(contextListener);
}
+ if(cdmEntitySession != null) {
+ cdmEntitySession.dispose();
+ }
+ CdmApplicationState.getCurrentDataChangeService().unregister(this);
super.dispose();
}
return (List<PolytomousKey>)viewer.getInput();
}
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled#getCdmEntitySession()
+ */
+ @Override
+ public ICdmEntitySession getCdmEntitySession() {
+ return cdmEntitySession;
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled#getRootEntities()
+ */
+ @Override
+ public List<PolytomousKey> getRootEntities() {
+ return getKeys();
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.cdm.api.application.ICdmChangeListener#onChange(eu.etaxonomy.cdm.api.application.CdmChangeEvent)
+ */
+ @Override
+ public void onChange(CdmChangeEvent event) {
+ if(event.getAction() == Action.Delete && PolytomousKey.class.equals(event.getEntityType())) {
+ refresh();
+ }
+
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled#getPropertyPathsMap()
+ */
+ @Override
+ public Map<Object, List<String>> getPropertyPathsMap() {
+ // TODO Auto-generated method stub
+ return null;
+ }
+
}
import org.eclipse.core.commands.ExecutionException;
import org.eclipse.core.commands.common.NotDefinedException;
import org.eclipse.jface.viewers.IStructuredSelection;
-import org.eclipse.ui.IEditorInput;
-import org.eclipse.ui.IEditorReference;
-import org.eclipse.ui.IWorkbenchPage;
-import org.eclipse.ui.PartInitException;
import org.eclipse.ui.handlers.HandlerUtil;
import eu.etaxonomy.cdm.model.description.PolytomousKey;
-import eu.etaxonomy.taxeditor.editor.key.polytomous.PolytomousKeyEditorInput;
import eu.etaxonomy.taxeditor.model.MessagingUtils;
import eu.etaxonomy.taxeditor.navigation.NavigationUtil;
import eu.etaxonomy.taxeditor.navigation.key.polytomous.PolytomousKeyViewPart;
*/
public class DeleteHandler extends AbstractHandler {
- protected IWorkbenchPage activePage;
/* (non-Javadoc)
* @see org.eclipse.core.commands.IHandler#execute(org.eclipse.core.commands.ExecutionEvent)
*/
@Override
public Object execute(ExecutionEvent event) throws ExecutionException {
IStructuredSelection selection = (IStructuredSelection) HandlerUtil.getCurrentSelection(event);
- activePage = HandlerUtil.getActiveWorkbenchWindow(event).getActivePage();
+
List<PolytomousKey> keys = selection.toList();
if(keys.isEmpty()){
return null;
}
- for (PolytomousKey key : keys){
- closeObsoleteEditor(key);
- }
- boolean confirmation = MessagingUtils.confirmDialog("Confirm deletion", "Do you want to delete the selected key" + (keys.size() == 1 ? "" : "s") + "?");
+
+ boolean confirmation = MessagingUtils.confirmDialog("Confirm deletaion", "Do you want to delete the selected key" + (keys.size() == 1 ? "" : "s") + "?");
if(confirmation){
for(PolytomousKey key : keys){
try {
+ PolytomousKeyViewPart pkvp = (PolytomousKeyViewPart) NavigationUtil.getView(PolytomousKeyViewPart.ID, false);
AbstractPostOperation operation = new DeleteOperation(
event.getCommand().getName(),
NavigationUtil.getUndoContext(), key,
- (PolytomousKeyViewPart) NavigationUtil.getView(PolytomousKeyViewPart.ID, false),
- (PolytomousKeyViewPart) NavigationUtil.getView(PolytomousKeyViewPart.ID, false));
+ pkvp,
+ pkvp,
+ pkvp);
NavigationUtil.executeOperation(operation);
} catch (NotDefinedException e) {
MessagingUtils.error(getClass(), e);
return null;
}
-
- protected boolean closeObsoleteEditor(PolytomousKey key){
- boolean result = true;
- for (IEditorReference ref : activePage.getEditorReferences()) {
- try {
-
- IEditorInput input = ref.getEditorInput();
- if (input instanceof PolytomousKeyEditorInput) {
- PolytomousKey pKey = ((PolytomousKeyEditorInput)input).getKey();
- //if node is a child of taxonNode then close the editor
- if(key.equals(pKey)){
- //if (taxonNode.equals(node)) {
- result &= activePage.closeEditor(ref.getEditor(false), true);
-
- }
- }
- } catch (PartInitException e) {
- continue;
- }
- }
- return result;
- }
}
--- /dev/null
+// $Id$
+/**
+* Copyright (C) 2015 EDIT
+* European Distributed Institute of Taxonomy
+* http://www.e-taxonomy.eu
+*
+* The contents of this file are subject to the Mozilla Public License Version 1.1
+* See LICENSE.TXT at the top of this package for the full license terms.
+*/
+package eu.etaxonomy.taxeditor.navigation.key.polytomous.handler;
+
+import java.util.List;
+import java.util.UUID;
+
+import org.eclipse.core.commands.ExecutionEvent;
+import org.eclipse.core.commands.operations.AbstractOperation;
+import org.eclipse.core.runtime.IStatus;
+import org.eclipse.core.runtime.Status;
+import org.eclipse.jface.viewers.IStructuredSelection;
+import org.eclipse.ui.handlers.HandlerUtil;
+
+import eu.etaxonomy.taxeditor.model.MessagingUtils;
+import eu.etaxonomy.taxeditor.navigation.key.polytomous.PolytomousKeyViewLabels;
+import eu.etaxonomy.taxeditor.navigation.key.polytomous.operation.RemotingDeletePolytomousKeyOperation;
+import eu.etaxonomy.taxeditor.operation.RemotingCdmHandler;
+import eu.etaxonomy.taxeditor.util.OperationsUtil;
+
+/**
+ * @author cmathew
+ * @date 25 Jun 2015
+ *
+ */
+public class RemotingDeletePolytomousKeyHandler extends RemotingCdmHandler {
+
+ List<UUID> keysToDelete;
+ /**
+ * @param label
+ */
+ public RemotingDeletePolytomousKeyHandler() {
+ super(PolytomousKeyViewLabels.DELETE_POLYTOMOUS_KEY_LABEL);
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.operation.RemotingCdmHandler#allowOperations(org.eclipse.core.commands.ExecutionEvent)
+ */
+ @Override
+ public IStatus allowOperations(ExecutionEvent event) {
+ IStructuredSelection selection = (IStructuredSelection) HandlerUtil.getCurrentSelection(event);
+
+ keysToDelete = OperationsUtil.convertToUuidList(selection.toList());
+
+ if(keysToDelete.isEmpty()){
+ return Status.CANCEL_STATUS;
+ }
+
+ boolean confirmation = MessagingUtils.confirmDialog("Confirm deletaion", "Do you want to delete the selected key" + (keysToDelete.size() == 1 ? "" : "s") + "?");
+
+ if(!confirmation) {
+ return Status.CANCEL_STATUS;
+ }
+ return Status.OK_STATUS;
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.operation.RemotingCdmHandler#prepareOperation(org.eclipse.core.commands.ExecutionEvent)
+ */
+ @Override
+ public AbstractOperation prepareOperation(ExecutionEvent event) {
+ return new RemotingDeletePolytomousKeyOperation(event.getTrigger(),
+ false,
+ keysToDelete);
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.operation.RemotingCdmHandler#onComplete()
+ */
+ @Override
+ public void onComplete() {
+ // TODO Auto-generated method stub
+
+ }
+
+}
--- /dev/null
+// $Id$
+/**
+* Copyright (C) 2015 EDIT
+* European Distributed Institute of Taxonomy
+* http://www.e-taxonomy.eu
+*
+* The contents of this file are subject to the Mozilla Public License Version 1.1
+* See LICENSE.TXT at the top of this package for the full license terms.
+*/
+package eu.etaxonomy.taxeditor.navigation.key.polytomous.handler;
+
+import org.eclipse.core.commands.AbstractHandler;
+import org.eclipse.core.commands.ExecutionEvent;
+import org.eclipse.core.commands.ExecutionException;
+import org.eclipse.core.runtime.IProgressMonitor;
+import org.eclipse.core.runtime.IStatus;
+import org.eclipse.core.runtime.Status;
+import org.eclipse.core.runtime.jobs.Job;
+import org.eclipse.jface.viewers.ISelection;
+import org.eclipse.jface.viewers.StructuredSelection;
+import org.eclipse.swt.widgets.Display;
+
+import eu.etaxonomy.cdm.model.description.PolytomousKey;
+import eu.etaxonomy.taxeditor.editor.EditorUtil;
+import eu.etaxonomy.taxeditor.model.MessagingUtils;
+import eu.etaxonomy.taxeditor.navigation.NavigationUtil;
+import eu.etaxonomy.taxeditor.navigation.key.polytomous.PolytomousKeyViewLabels;
+import eu.etaxonomy.taxeditor.navigation.key.polytomous.PolytomousKeyViewPart;
+
+/**
+ * @author cmathew
+ * @date 29 Jun 2015
+ *
+ */
+public class RemotingEditPolytomousKeyNodesHandler extends AbstractHandler {
+
+ /* (non-Javadoc)
+ * @see org.eclipse.core.commands.IHandler#execute(org.eclipse.core.commands.ExecutionEvent)
+ */
+ @Override
+ public Object execute(final ExecutionEvent event) throws ExecutionException {
+ PolytomousKeyViewPart view = (PolytomousKeyViewPart) NavigationUtil.getView(PolytomousKeyViewPart.ID, false);
+
+ ISelection selection = view.getSite().getSelectionProvider().getSelection();
+ if(selection instanceof StructuredSelection){
+
+ final StructuredSelection structuredSelection = (StructuredSelection) selection;
+
+ Job job = new Job("Opening Polytomous Keys"){
+
+ @Override
+ protected IStatus run(IProgressMonitor monitor) {
+ monitor.beginTask("Opening Polytomous Keys", structuredSelection.size());
+
+ for(final Object selectedObject : structuredSelection.toArray()){
+ if(selectedObject instanceof PolytomousKey){
+
+ Display.getDefault().asyncExec(new Runnable(){
+
+ @Override
+ public void run() {
+ try {
+ PolytomousKey key = (PolytomousKey) selectedObject;
+ EditorUtil.openPolytomousKey(key.getUuid());
+ } catch(Exception ex) {
+ MessagingUtils.warningDialog(PolytomousKeyViewLabels.ERROR_OPENING_KEY_EDITOR_MESSAGE,
+ event.getTrigger(),
+ ex.getLocalizedMessage());
+ ex.printStackTrace();
+ }
+ }
+
+ });
+ monitor.worked(1);
+ }
+ }
+ monitor.done();
+ return Status.OK_STATUS;
+ }
+
+ };
+
+ job.setPriority(Job.SHORT);
+ job.schedule();
+
+ }
+ return null;
+ }
+
+}
--- /dev/null
+// $Id$
+/**
+* Copyright (C) 2015 EDIT
+* European Distributed Institute of Taxonomy
+* http://www.e-taxonomy.eu
+*
+* The contents of this file are subject to the Mozilla Public License Version 1.1
+* See LICENSE.TXT at the top of this package for the full license terms.
+*/
+package eu.etaxonomy.taxeditor.navigation.key.polytomous.handler;
+
+import org.eclipse.core.commands.ExecutionEvent;
+import org.eclipse.core.commands.operations.AbstractOperation;
+import org.eclipse.core.runtime.IStatus;
+import org.eclipse.core.runtime.Status;
+
+import eu.etaxonomy.taxeditor.navigation.key.polytomous.PolytomousKeyViewLabels;
+import eu.etaxonomy.taxeditor.navigation.key.polytomous.operation.RemotingUpdatePolytomousKeyAllNodesOperation;
+import eu.etaxonomy.taxeditor.operation.RemotingCdmHandler;
+
+/**
+ * @author cmathew
+ * @date 29 Jun 2015
+ *
+ */
+public class RemotingUpdatePolytomousKeyAllNodesHandler extends RemotingCdmHandler {
+
+ /**
+ * @param label
+ */
+ public RemotingUpdatePolytomousKeyAllNodesHandler() {
+ super(PolytomousKeyViewLabels.UPDATE_ALL_POLYTOMOUS_KEY_NODES_LABEL);
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.operation.RemotingCdmHandler#allowOperations(org.eclipse.core.commands.ExecutionEvent)
+ */
+ @Override
+ public IStatus allowOperations(ExecutionEvent event) {
+ return Status.OK_STATUS;
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.operation.RemotingCdmHandler#prepareOperation(org.eclipse.core.commands.ExecutionEvent)
+ */
+ @Override
+ public AbstractOperation prepareOperation(ExecutionEvent event) {
+ return new RemotingUpdatePolytomousKeyAllNodesOperation(event.getTrigger(), false);
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.operation.RemotingCdmHandler#onComplete()
+ */
+ @Override
+ public void onComplete() {
+ // TODO Auto-generated method stub
+
+ }
+
+}
import eu.etaxonomy.cdm.model.description.PolytomousKey;
import eu.etaxonomy.taxeditor.operation.AbstractPersistentPostOperation;
import eu.etaxonomy.taxeditor.operation.IPostOperationEnabled;
+import eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled;
import eu.etaxonomy.taxeditor.store.CdmStore;
/**
public class DeleteOperation extends AbstractPersistentPostOperation {
private final PolytomousKey key;
+ private final ICdmEntitySessionEnabled cdmEntitySessionEnabled;
+
/**
* @param label
*/
public DeleteOperation(String label, IUndoContext undoContext,
PolytomousKey key,
- IPostOperationEnabled postOperationEnabled, IConversationEnabled conversationEnabled) {
- super(label, undoContext, postOperationEnabled, conversationEnabled);
+ IPostOperationEnabled postOperationEnabled,
+ IConversationEnabled conversationEnabled,
+ ICdmEntitySessionEnabled cdmEntitySessionEnabled) {
+ super(label, undoContext, postOperationEnabled, conversationEnabled, cdmEntitySessionEnabled);
this.key = key;
+ this.cdmEntitySessionEnabled = cdmEntitySessionEnabled;
}
@Override
bind();
DeleteResult result = CdmStore.getService(IPolytomousKeyService.class).delete(key);
+
if (result.isError() && !result.getExceptions().isEmpty()){
MessageDialog.openError(null, "Delete failed", result.getExceptions().iterator().next().getMessage());
--- /dev/null
+// $Id$
+/**
+* Copyright (C) 2015 EDIT
+* European Distributed Institute of Taxonomy
+* http://www.e-taxonomy.eu
+*
+* The contents of this file are subject to the Mozilla Public License Version 1.1
+* See LICENSE.TXT at the top of this package for the full license terms.
+*/
+package eu.etaxonomy.taxeditor.navigation.key.polytomous.operation;
+
+import java.util.List;
+import java.util.UUID;
+
+import org.eclipse.core.runtime.IAdaptable;
+import org.eclipse.core.runtime.IProgressMonitor;
+
+import eu.etaxonomy.cdm.api.application.CdmChangeEvent.Action;
+import eu.etaxonomy.cdm.api.service.IPolytomousKeyService;
+import eu.etaxonomy.cdm.api.service.UpdateResult;
+import eu.etaxonomy.cdm.model.description.PolytomousKey;
+import eu.etaxonomy.taxeditor.operation.RemotingCdmUpdateOperation;
+import eu.etaxonomy.taxeditor.store.CdmStore;
+
+/**
+ * @author cmathew
+ * @date 25 Jun 2015
+ *
+ */
+public class RemotingDeletePolytomousKeyOperation extends RemotingCdmUpdateOperation {
+
+ private final static String LABEL = "Delete Polytomous Key operation";
+
+ private final List<UUID> keysToDelete;
+ /**
+ * @param label
+ * @param action
+ * @param source
+ * @param async
+ */
+ public RemotingDeletePolytomousKeyOperation(Object source,
+ boolean async,
+ List<UUID> keysToDelete) {
+ super(LABEL, Action.Delete, source, async);
+ this.keysToDelete = keysToDelete;
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.operation.RemotingCdmUpdateOperation#doUpdateExecute(org.eclipse.core.runtime.IProgressMonitor, org.eclipse.core.runtime.IAdaptable)
+ */
+ @Override
+ protected UpdateResult doUpdateExecute(IProgressMonitor monitor, IAdaptable info) throws Exception {
+ entityType = PolytomousKey.class;
+ return CdmStore.getService(IPolytomousKeyService.class).delete(keysToDelete);
+ }
+
+}
--- /dev/null
+// $Id$
+/**
+* Copyright (C) 2015 EDIT
+* European Distributed Institute of Taxonomy
+* http://www.e-taxonomy.eu
+*
+* The contents of this file are subject to the Mozilla Public License Version 1.1
+* See LICENSE.TXT at the top of this package for the full license terms.
+*/
+package eu.etaxonomy.taxeditor.navigation.key.polytomous.operation;
+
+import java.util.UUID;
+
+import org.eclipse.core.runtime.IAdaptable;
+import org.eclipse.core.runtime.IProgressMonitor;
+
+import eu.etaxonomy.cdm.api.application.CdmChangeEvent.Action;
+import eu.etaxonomy.cdm.api.service.IPolytomousKeyService;
+import eu.etaxonomy.cdm.api.service.UpdateResult;
+import eu.etaxonomy.taxeditor.operation.RemotingCdmUpdateOperation;
+import eu.etaxonomy.taxeditor.store.CdmStore;
+
+/**
+ * @author cmathew
+ * @date 29 Jun 2015
+ *
+ */
+public class RemotingUpdatePolytomousKeyAllNodesOperation extends RemotingCdmUpdateOperation {
+
+ private final UUID polytomousKeyUuid;
+ /**
+ * @param label
+ * @param action
+ * @param source
+ * @param async
+ */
+ public RemotingUpdatePolytomousKeyAllNodesOperation(Object source,
+ boolean async,
+ UUID polytomousKeyUuid) {
+ super(LABEL, Action.Update, source, async);
+ this.polytomousKeyUuid = polytomousKeyUuid;
+
+ }
+
+ public RemotingUpdatePolytomousKeyAllNodesOperation(Object source,
+ boolean async) {
+ super(LABEL, Action.Update, source, async);
+ // this implies that we have to update all nodes of all keys
+ this.polytomousKeyUuid = null;
+ }
+
+ private final static String LABEL = "Update All Polytomous Key Nodes operation";
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.operation.RemotingCdmUpdateOperation#doUpdateExecute(org.eclipse.core.runtime.IProgressMonitor, org.eclipse.core.runtime.IAdaptable)
+ */
+ @Override
+ protected UpdateResult doUpdateExecute(IProgressMonitor monitor, IAdaptable info) throws Exception {
+ if(polytomousKeyUuid == null) {
+ return CdmStore.getService(IPolytomousKeyService.class).updateAllNodeNumberings();
+ } else {
+ return CdmStore.getService(IPolytomousKeyService.class).updateAllNodeNumberings(polytomousKeyUuid);
+ }
+ }
+
+}
// $Id$
/**
* Copyright (C) 2007 EDIT
-* European Distributed Institute of Taxonomy
+* European Distributed Institute of Taxonomy
* http://www.e-taxonomy.eu
-*
+*
* The contents of this file are subject to the Mozilla Public License Version 1.1
* See LICENSE.TXT at the top of this package for the full license terms.
*/
*/
public class Root extends PlatformObject implements IAdaptable, IPersistableElement, IElementFactory, IConversationEnabled {
- private ConversationHolder conversation;
-
+ private final ConversationHolder conversation;
+
/**
* <p>Constructor for Root.</p>
*
public Root (ConversationHolder conversation){
this.conversation = conversation;
}
-
+
/**
* <p>getParentBeans</p>
*
*/
public List<Classification> getParentBeans() {
List<String> propertyPaths = Arrays.asList(new String[]{"name"});
-
+
List<Classification> classifications = CdmStore.getService(IClassificationService.class).list(null, null, null, null, propertyPaths);
-
+
if(classifications.size() == 0){
Classification classification = Classification.NewInstance("My Classification");
- AbstractPostOperation operation = new CreateClassification("Creating initial classification", NavigationUtil.getUndoContext(), classification, NavigationUtil.getNavigator(false), NavigationUtil.getNavigator(false));
+ AbstractPostOperation operation = new CreateClassification("Creating initial classification", NavigationUtil.getUndoContext(), classification, NavigationUtil.getNavigator(false), NavigationUtil.getNavigator(false), NavigationUtil.getNavigator(false));
NavigationUtil.executeOperation(operation);
-
+
classifications = CdmStore.getService(IClassificationService.class).list(null, null, null, null, propertyPaths);
}
-
- return classifications;
+
+ return classifications;
}
/* (non-Javadoc)
*
* @return a {@link java.lang.String} object.
*/
- public String getFactoryId() {
+ @Override
+ public String getFactoryId() {
return null;
}
* @see org.eclipse.ui.IPersistable#saveState(org.eclipse.ui.IMemento)
*/
/** {@inheritDoc} */
- public void saveState(IMemento memento) {
+ @Override
+ public void saveState(IMemento memento) {
}
/* (non-Javadoc)
* @see org.eclipse.ui.IElementFactory#createElement(org.eclipse.ui.IMemento)
*/
/** {@inheritDoc} */
- public IAdaptable createElement(IMemento memento) {
+ @Override
+ public IAdaptable createElement(IMemento memento) {
return null;
}
// $Id$
/**
* Copyright (C) 2007 EDIT
-* European Distributed Institute of Taxonomy
+* European Distributed Institute of Taxonomy
* http://www.e-taxonomy.eu
-*
+*
* The contents of this file are subject to the Mozilla Public License Version 1.1
* See LICENSE.TXT at the top of this package for the full license terms.
*/
import org.eclipse.jface.viewers.IStructuredSelection;
import org.eclipse.jface.viewers.StructuredSelection;
import org.eclipse.ui.IEditorInput;
-import org.eclipse.ui.IEditorPart;
import org.eclipse.ui.IWorkbenchPage;
import org.eclipse.ui.navigator.ILinkHelper;
/** Constant <code>ID="eu.etaxonomy.taxeditor.navigation.taxon"{trunked}</code> */
public static final String ID = "eu.etaxonomy.taxeditor.navigation.taxonlinkhelper"; //$NON-NLS-1$
-
+
/* (non-Javadoc)
* @see org.eclipse.ui.navigator.ILinkHelper#activateEditor(org.eclipse.ui.IWorkbenchPage, org.eclipse.jface.viewers.IStructuredSelection)
*/
/** {@inheritDoc} */
- public void activateEditor(IWorkbenchPage page,
+ @Override
+ public void activateEditor(IWorkbenchPage page,
IStructuredSelection selection) {
try {
if (selection == null || selection.isEmpty()) {
return;
}
- if (selection.getFirstElement() instanceof TaxonNode) {
- TaxonNode taxonNode = (TaxonNode) selection.getFirstElement();
- TaxonEditorInput taxonEditorInput;
-
- taxonEditorInput = TaxonEditorInput.NewInstance(taxonNode.getUuid());
-
- IEditorPart editor = null;
- if ((editor = page.findEditor(taxonEditorInput)) != null) {
- page.bringToTop(editor);
- }
- }
+// if (selection.getFirstElement() instanceof TaxonNode) {
+// TaxonNode taxonNode = (TaxonNode) selection.getFirstElement();
+// TaxonEditorInput taxonEditorInput;
+//
+// taxonEditorInput = TaxonEditorInput.NewInstance(taxonNode.getUuid());
+//
+// IEditorPart editor = null;
+// if ((editor = page.findEditor(taxonEditorInput)) != null) {
+// page.bringToTop(editor);
+// }
+// }
} catch (Exception e) {
MessagingUtils.warningDialog("Could not create Taxon", this, e.getMessage());
}
* @see org.eclipse.ui.navigator.ILinkHelper#findSelection(org.eclipse.ui.IEditorInput)
*/
/** {@inheritDoc} */
- public IStructuredSelection findSelection(IEditorInput editorInput) {
+ @Override
+ public IStructuredSelection findSelection(IEditorInput editorInput) {
if (editorInput instanceof TaxonEditorInput) {
TaxonNode taxonNode = ((TaxonEditorInput) editorInput).getTaxonNode();
if (taxonNode != null) {
package eu.etaxonomy.taxeditor.navigation.navigator;
import java.util.ArrayList;
+import java.util.Arrays;
import java.util.Comparator;
+import java.util.HashMap;
import java.util.HashSet;
import java.util.List;
+import java.util.Map;
import java.util.Observable;
import java.util.Observer;
import java.util.Set;
import org.eclipse.ui.PartInitException;
import org.eclipse.ui.navigator.CommonNavigator;
+import eu.etaxonomy.cdm.api.application.CdmApplicationState;
+import eu.etaxonomy.cdm.api.application.CdmChangeEvent;
+import eu.etaxonomy.cdm.api.application.CdmChangeEvent.Action;
+import eu.etaxonomy.cdm.api.application.ICdmChangeListener;
import eu.etaxonomy.cdm.api.conversation.ConversationHolder;
import eu.etaxonomy.cdm.api.conversation.IConversationEnabled;
import eu.etaxonomy.cdm.api.service.IClassificationService;
import eu.etaxonomy.cdm.model.common.CdmBase;
+import eu.etaxonomy.cdm.model.taxon.Classification;
import eu.etaxonomy.cdm.model.taxon.TaxonNaturalComparator;
import eu.etaxonomy.cdm.model.taxon.TaxonNode;
import eu.etaxonomy.cdm.model.taxon.TaxonNodeByRankAndNameComparator;
import eu.etaxonomy.taxeditor.navigation.NavigationUtil;
import eu.etaxonomy.taxeditor.operation.IPostOperationEnabled;
import eu.etaxonomy.taxeditor.preference.PreferencesUtil;
+import eu.etaxonomy.taxeditor.session.ICdmEntitySession;
+import eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled;
import eu.etaxonomy.taxeditor.store.CdmStore;
import eu.etaxonomy.taxeditor.store.LoginManager;
* @version 1.0
*/
public class TaxonNavigator extends CommonNavigator implements
- IPostOperationEnabled, IConversationEnabled, Observer {
+ IPostOperationEnabled, IConversationEnabled, Observer,
+ ICdmEntitySessionEnabled, ICdmChangeListener {
/**
* Constant
private ConversationHolder conversation;
+ private ICdmEntitySession cdmEntitySession;
+
private String partNameCache;
private IDataChangeBehavior dataChangeBehavior;
+ private Root root;
+
/*
* (non-Javadoc)
*
// we do not preserve state. Closing the view, in contrary to
// closing the whole application
// should be handled by the state manager too
-
- return new Root(conversation);
+ root = new Root(conversation);
+ return root;
}
return new EmptyRoot();
}
* </p>
*/
public void init() {
+
if (CdmStore.isActive() && conversation == null) {
conversation = CdmStore.createConversation();
conversation.registerForDataStoreChanges(TaxonNavigator.this);
}
+ if (CdmStore.isActive()) {
+ cdmEntitySession = CdmStore.getCurrentSessionManager().newSession(this, true);
+ CdmApplicationState.getCurrentDataChangeService().register(this);
+ }
CdmStore.getLoginManager().addObserver(this);
}
getCommonViewer().refresh();
}
+ /**
+ * Refresh this navigators viewer
+ */
+ public void refresh(Set objects) {
+ for(Object obj : objects) {
+ getCommonViewer().refresh(obj);
+ }
+ }
+
/**
* Removes all content
*/
* a {@link org.eclipse.core.runtime.IProgressMonitor} object.
*/
public void restore(IMemento memento, IProgressMonitor monitor) {
+ root = new Root(conversation);
if (memento == null) {
- getCommonViewer().setInput(new Root(conversation));
+ getCommonViewer().setInput(root);
return;
}
int mementoWork = 0;
subProgressMonitor.worked(1);
conversation.registerForDataStoreChanges(TaxonNavigator.this);
subProgressMonitor.worked(1);
- getCommonViewer().setInput(new Root(conversation));
+ getCommonViewer().setInput(root);
subProgressMonitor.worked(1);
getCommonViewer().refresh();
subProgressMonitor.worked(1);
if (conversation != null) {
conversation.unregisterForDataStoreChanges(this);
}
+ if(cdmEntitySession != null) {
+ cdmEntitySession.dispose();
+ }
+ if(CdmApplicationState.getCurrentDataChangeService() != null) {
+ CdmApplicationState.getCurrentDataChangeService().unregister(this);
+ }
}
/*
if (getConversationHolder() != null) {
getConversationHolder().bind();
}
+ if(cdmEntitySession != null) {
+ cdmEntitySession.bind();
+ }
}
/*
}
}
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled#getCdmEntitySession()
+ */
+ @Override
+ public ICdmEntitySession getCdmEntitySession() {
+ return cdmEntitySession;
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled#getRootEntities()
+ */
+ @Override
+ public List<Classification> getRootEntities() {
+ if(root != null) {
+ return root.getParentBeans();
+ }
+ return null;
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.cdm.api.application.ICdmChangeListener#onChange(eu.etaxonomy.cdm.api.application.CdmChangeEvent)
+ */
+ @Override
+ public void onChange(CdmChangeEvent event) {
+ if(event.getAction() == Action.Delete && Classification.class.equals(event.getEntityType())) {
+ refresh();
+ return;
+ }
+ for(CdmBase cb : event.getChangedObjects()) {
+ if(cb instanceof TaxonNode) {
+ TaxonNode tn = (TaxonNode)cb;
+ if(tn.getTaxon() == null) {
+ getCommonViewer().refresh(tn.getClassification());
+ } else {
+ getCommonViewer().refresh(cb);
+ }
+ } else if (cb instanceof Classification) {
+ getCommonViewer().refresh();
+ }
+ }
+
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled#getPropertyPathsMap()
+ */
+ @Override
+ public Map<Object, List<String>> getPropertyPathsMap() {
+ Map<Object, List<String>> propertyPathsMap = new HashMap<Object, List<String>>();
+ List<String> taxonNodePropertyPaths = Arrays.asList(new String[] {
+ "taxon.name"
+ });
+ propertyPathsMap.put("childNodes", taxonNodePropertyPaths);
+ return propertyPathsMap;
+ }
}
/**
* Copyright (C) 2007 EDIT
-* European Distributed Institute of Taxonomy
+* European Distributed Institute of Taxonomy
* http://www.e-taxonomy.eu
-*
+*
* The contents of this file are subject to the Mozilla Public License Version 1.1
* See LICENSE.TXT at the top of this package for the full license terms.
*/
import org.eclipse.swt.widgets.Display;
import org.eclipse.ui.IEditorPart;
+import eu.etaxonomy.cdm.hibernate.HibernateProxyHelper;
import eu.etaxonomy.cdm.model.common.CdmBase;
import eu.etaxonomy.cdm.model.name.TaxonNameBase;
import eu.etaxonomy.cdm.model.taxon.ITaxonTreeNode;
import eu.etaxonomy.cdm.persistence.hibernate.CdmDataChangeEvent;
import eu.etaxonomy.cdm.persistence.hibernate.CdmDataChangeEvent.EventType;
import eu.etaxonomy.cdm.persistence.hibernate.CdmDataChangeMap;
-import eu.etaxonomy.taxeditor.editor.TaxonEditorInput;
import eu.etaxonomy.taxeditor.model.AbstractDataChangeBehaviour;
import eu.etaxonomy.taxeditor.model.IDataChangeBehavior;
import eu.etaxonomy.taxeditor.navigation.NavigationUtil;
* @created 01.04.2009
* @version 1.0
*/
-public class TaxonNavigatorDataChangeBehavior extends AbstractDataChangeBehaviour implements
+public class TaxonNavigatorDataChangeBehavior extends AbstractDataChangeBehaviour implements
IDataChangeBehavior {
- private TaxonNavigator source;
+ private final TaxonNavigator source;
private Set<CdmBase> staleObjects;
-
+
/**
* <p>Constructor for TaxonNavigatorDataChangeBehavior.</p>
*
public TaxonNavigatorDataChangeBehavior(TaxonNavigator taxonNavigator) {
source = taxonNavigator;
}
-
+
/* (non-Javadoc)
* @see eu.etaxonomy.taxeditor.store.model.IDataChangeBehavior#isRelevant(java.lang.Object, eu.etaxonomy.cdm.persistence.hibernate.CdmCrudEvent)
*/
* @return a boolean.
*/
public boolean isRelevant(CdmDataChangeMap events) {
-
+
// TODO react only on insert/update/delete of taxon and synonym objects
// and on update of name objects
boolean relevant = false;
staleObjects = new HashSet<CdmBase>();
-
+
for(CdmDataChangeEvent event : events.getAllEvents()){
EventType eventType = event.getEventType();
CdmBase eventEntity = event.getEntity();
-
+
+ Set<CdmBase> affectedObjects = event.getAffectedObjects();
+ if(affectedObjects != null) {
+ for(CdmBase cb : affectedObjects) {
+ staleObjects.add((CdmBase)HibernateProxyHelper.deproxy(cb));
+ }
+ }
+
// all tree node changes are relevant
- if((eventType == EventType.INSERT || eventType == EventType.DELETE || eventType == EventType.UPDATE)
+ if((eventType == EventType.INSERT || eventType == EventType.DELETE || eventType == EventType.UPDATE)
&& event.getEntity() instanceof ITaxonTreeNode){
return true;
}
-
+
// name updates of the accepted taxon of open editors are relevant
if(eventType == EventType.UPDATE && event.getEntity() instanceof TaxonNameBase){
TaxonNameBase name = null;
}else{
continue;
}
-
+
Set<IEditorPart> openEditors = NavigationUtil.getOpenEditors();
/*for(IEditorPart editor : openEditors){
-
+
if(name.equals(((TaxonEditorInput) editor.getEditorInput()).getTaxon().getName())){
return true;
}
if (eventType == EventType.DELETE){
return true;
}
-
+
+
+
if(eventType == EventType.UPDATE && event.getEntity() instanceof Taxon){
TaxonNameBase name = null;
if(eventEntity instanceof Taxon){
}else{
continue;
}
-
- Set<IEditorPart> openEditors = NavigationUtil.getOpenEditors();
+
+ // Set<IEditorPart> openEditors = NavigationUtil.getOpenEditors();
/*for(IEditorPart editor : openEditors){
-
+
if(name.equals(((TaxonEditorInput) editor.getEditorInput()).getTaxon().getName())){
return true;
}
}*/
}
-
+
// if(eventType == EventType.UPDATE){
// relevant = true;
// CdmBase entity = event.getEntity();
// }
// }
}
-
+
return false;
-
+
// @deprecated
// react on everything except load
// if(events.sizeByEventType(EventType.INSERT) > 0){
final Display display = Display.getCurrent();
Job job = new Job("Updating Taxon Navigator") {
-
+
@Override
protected IStatus run(IProgressMonitor monitor) {
monitor.beginTask("Updating Taxon Navigator", 3);
monitor.worked(1);
-
+
// clear the session completely
monitor.subTask("Clearing Taxon Navigators session");
display.asyncExec(new Runnable() {
public void run() {
source.getConversationHolder().clear();
}
- });
- // FIXME completely clearing the session is a brute force approach.
+ });
+ // FIXME completely clearing the session is a brute force approach.
// It would be much more elegant to clear only those elements that have been changed.
// I could not get that to work but we should consider workin on this because we might
// run into serious performance issues, especially when it comes to large trees
// at least, we moved this to a job so it can run in a background thred
// seems to improve the situation but not sure if final solution
monitor.worked(1);
-
+
monitor.subTask("Refreshing viewer");
-
+
display.asyncExec(new Runnable() {
@Override
public void run() {
- source.refresh();
+ if(staleObjects != null && staleObjects.size() > 0) {
+ source.refresh(staleObjects);
+ } else {
+ source.refresh();
+ }
}
});
-
-
-
+
+
+
monitor.worked(1);
monitor.done();
return Status.OK_STATUS;
}
};
-
+
job.setPriority(Job.SHORT);
job.schedule();
-
+
}
}
}
--- /dev/null
+// $Id$
+/**
+* Copyright (C) 2015 EDIT
+* European Distributed Institute of Taxonomy
+* http://www.e-taxonomy.eu
+*
+* The contents of this file are subject to the Mozilla Public License Version 1.1
+* See LICENSE.TXT at the top of this package for the full license terms.
+*/
+package eu.etaxonomy.taxeditor.navigation.navigator;
+
+/**
+ * @author cmathew
+ * @date 19 Jun 2015
+ *
+ */
+public interface TaxonNavigatorLabels {
+
+ public static final String CHANGE_ACCEPTED_TAXON_TO_SYNONYM_LABEL = "Change Accepted Taxon to Synonym";
+ public static final String MOVE_TAXON_LABEL = "Move Taxon";
+ public static final String MOVE_FACTUAL_DATA_LABEL = "Move Factual Data";
+ public static final String DELETE_TAXON_NODE_LABEL = "Delete Taxon Node";
+
+ public static final String NO_TAXON_SELECTION_MESSAGE = "No taxon tree node selected for operation.";
+ public static final String SINGLE_TAXON_SELECTION_MESSAGE = "The chosen operation is available only for a single taxon.";
+ public static final String SOURCE_TAXON_HAS_CHILDREN_MESSAGE = "The chosen taxon must not have any childen. You need to move all childen to " +
+ "another taxon node in the TaxonNavigator before attempting to turn the accepted " +
+ "taxon into a synonym.";
+ public static final String RELATED_EDITOR_NOT_CLOSED_MESSAGE = "Could not close related taxon name editor. " +
+ "Please close it manually and try again.";
+ public static final String SELECTED_OBJECT_NOT_TREE_NODE_MESSAGE = "Selected object is not a taxon tree node";
+ public static final String UNSAVED_CHANGES_MESSAGE = "There are unsaved changes in the source taxon. Please save first.";
+
+
+
+}
import java.util.UUID;
import org.apache.log4j.Logger;
+import org.eclipse.core.commands.operations.AbstractOperation;
import org.eclipse.core.commands.operations.IUndoContext;
import org.eclipse.core.runtime.IStatus;
import org.eclipse.core.runtime.Status;
import eu.etaxonomy.cdm.persistence.hibernate.permission.CRUD;
import eu.etaxonomy.taxeditor.navigation.NavigationUtil;
import eu.etaxonomy.taxeditor.navigation.navigator.operation.MoveTaxonOperation;
+import eu.etaxonomy.taxeditor.navigation.navigator.operation.RemotingMoveTaxonOperation;
import eu.etaxonomy.taxeditor.operation.AbstractPostOperation;
import eu.etaxonomy.taxeditor.operation.IPostOperationEnabled;
import eu.etaxonomy.taxeditor.preference.PreferencesUtil;
return Status.CANCEL_STATUS;
}
- AbstractPostOperation operation = new MoveTaxonOperation
- ("Move Taxon", workspaceUndoContext, uuids, targetITaxonTreeNode, this, taxonNavigator, true);
- NavigationUtil.executeOperation(operation);
+ if(CdmStore.getCurrentSessionManager().isRemoting()) {
+ AbstractOperation operation = new RemotingMoveTaxonOperation(taxonNavigator, false, uuids, (TaxonNode)targetITaxonTreeNode, true);
+ NavigationUtil.executeOperation(operation, null);
+ } else {
+ AbstractPostOperation operation = new MoveTaxonOperation
+ ("Move Taxon", workspaceUndoContext, uuids, targetITaxonTreeNode, this, taxonNavigator, true);
+ NavigationUtil.executeOperation(operation);
+ }
logger.info("Moved taxa to new parent " + targetITaxonTreeNode);
return Status.OK_STATUS;
return Status.CANCEL_STATUS;
}
- AbstractPostOperation operation = new MoveTaxonOperation
- ("Move Taxon", workspaceUndoContext, uuids, targetITaxonTreeNode, this, taxonNavigator, true);
- NavigationUtil.executeOperation(operation);
+ if(CdmStore.getCurrentSessionManager().isRemoting()) {
+ AbstractOperation operation = new RemotingMoveTaxonOperation(taxonNavigator, false, uuids, (TaxonNode)targetITaxonTreeNode, true);
+ NavigationUtil.executeOperation(operation, null);
+ } else {
+ AbstractPostOperation operation = new MoveTaxonOperation
+ ("Move Taxon", workspaceUndoContext, uuids, targetITaxonTreeNode, this, taxonNavigator, true);
+ NavigationUtil.executeOperation(operation);
+ }
logger.info("Moved taxa to new parent " + targetITaxonTreeNode);
return Status.OK_STATUS;
return Status.CANCEL_STATUS;
}
TaxonNode targetNode = (TaxonNode) targetITaxonTreeNode;
- AbstractPostOperation operation = new MoveTaxonOperation
- ("Move Taxon", workspaceUndoContext, uuids, targetNode.getParent(), this, taxonNavigator, false);
- NavigationUtil.executeOperation(operation);
+ if(CdmStore.getCurrentSessionManager().isRemoting()) {
+ AbstractOperation operation = new RemotingMoveTaxonOperation(taxonNavigator, false, uuids, targetNode.getParent(), true);
+ NavigationUtil.executeOperation(operation, null);
+ } else {
+ AbstractPostOperation operation = new MoveTaxonOperation
+ ("Move Taxon", workspaceUndoContext, uuids, targetNode.getParent(), this, taxonNavigator, false);
+ NavigationUtil.executeOperation(operation);
+ }
logger.info("Moved taxa to new parent " + targetITaxonTreeNode);
return Status.OK_STATUS;
} else{
/**
- *
+ *
*/
package eu.etaxonomy.taxeditor.navigation.navigator.handler;
import java.util.UUID;
import org.apache.log4j.Logger;
-import org.eclipse.core.commands.AbstractHandler;
import org.eclipse.core.commands.ExecutionEvent;
import org.eclipse.core.commands.ExecutionException;
import org.eclipse.core.commands.IHandler;
import org.eclipse.core.commands.common.NotDefinedException;
-import org.eclipse.core.commands.operations.IUndoContext;
import org.eclipse.jface.dialogs.MessageDialog;
import org.eclipse.jface.viewers.TreeSelection;
import org.eclipse.swt.widgets.Display;
import org.eclipse.ui.PartInitException;
import org.eclipse.ui.handlers.HandlerUtil;
-import eu.etaxonomy.cdm.api.conversation.IConversationEnabled;
-import eu.etaxonomy.cdm.api.service.config.TaxonDeletionConfigurator;
import eu.etaxonomy.cdm.model.common.CdmBase;
-import eu.etaxonomy.cdm.model.taxon.Classification;
import eu.etaxonomy.cdm.model.taxon.ITaxonTreeNode;
import eu.etaxonomy.cdm.model.taxon.TaxonNode;
import eu.etaxonomy.taxeditor.editor.EditorUtil;
import eu.etaxonomy.taxeditor.editor.MultiPageTaxonEditor;
-import eu.etaxonomy.taxeditor.editor.Page;
-import eu.etaxonomy.taxeditor.editor.TaxonEditorInput;
import eu.etaxonomy.taxeditor.editor.name.TaxonNameEditor;
import eu.etaxonomy.taxeditor.model.MessagingUtils;
import eu.etaxonomy.taxeditor.navigation.NavigationUtil;
import eu.etaxonomy.taxeditor.navigation.navigator.operation.ChangeAcceptedTaxonToSynonymOperation;
-import eu.etaxonomy.taxeditor.navigation.navigator.operation.DeleteOperation;
import eu.etaxonomy.taxeditor.operation.AbstractPostOperation;
import eu.etaxonomy.taxeditor.operation.IPostOperationEnabled;
import eu.etaxonomy.taxeditor.ui.dialog.selection.TaxonNodeSelectionDialog;
private UUID newAcceptedTaxonNodeUuid;
private TaxonNameEditor editor;
-
+
/* (non-Javadoc)
* @see org.eclipse.core.commands.IHandler#execute(org.eclipse.core.commands.ExecutionEvent)
*/
/** {@inheritDoc} */
- public Object execute(ExecutionEvent event) throws ExecutionException {
-
-
+ @Override
+ public Object execute(ExecutionEvent event) throws ExecutionException {
+
+
activePage = HandlerUtil.getActiveWorkbenchWindow(event).getActivePage();
taxonNavigator = NavigationUtil.showNavigator();
String plural = selection.size() > 1 ? "s" : "";
// Prompt user for confirmation
-
-
+
+
Iterator selectionIterator = selection.iterator();
Set<ITaxonTreeNode> treeNodes = new HashSet<ITaxonTreeNode>();
AbstractPostOperation operation = null;
if (treeNodes.size() == 1 ){
try {
-
+
ITaxonTreeNode treeNode = treeNodes.iterator().next();
ITaxonTreeNode oldAcceptedTaxonNode =treeNode;
-
+
// check if taxon has no children
if(((TaxonNode)oldAcceptedTaxonNode).getCountChildren() > 0) {
- MessagingUtils.warningDialog("Prerequisite not met", this,
+ MessagingUtils.warningDialog("Prerequisite not met", this,
"The accepted taxon must not have any childen. You need to move all childen to " +
"another taxon node in the TaxonNavigator before attempting to turn the accepted " +
"taxon into a synonym.");
return null;
}
/*if(((TaxonNode)oldAcceptedTaxonNode).getTaxon().hasSynonyms()) {
- EditorUtil.warningDialog("Prerequisite not met", this,
+ EditorUtil.warningDialog("Prerequisite not met", this,
"The accepted taxon must not have any synonyms. You need to move all synonyms to " +
"another taxon before attempting to turn the accepted " +
"taxon into a synonym.");
return null;
}*/
-
+
List<UUID> excludeTaxa = new ArrayList<UUID>();
excludeTaxa.add(oldAcceptedTaxonNode.getUuid());
- TaxonNode newAcceptedTaxonNode = TaxonNodeSelectionDialog.select(HandlerUtil.getActiveShell(event),
- taxonNavigator.getConversationHolder(),
- "Choose the accepted taxon",
- excludeTaxa,
- null,
- ((TaxonNode)oldAcceptedTaxonNode).getClassification());
+ TaxonNode newAcceptedTaxonNode = TaxonNodeSelectionDialog.select(HandlerUtil.getActiveShell(event),
+ taxonNavigator.getConversationHolder(),
+ "Choose the accepted taxon",
+ excludeTaxa,
+ null,
+ ((TaxonNode)oldAcceptedTaxonNode).getClassification());
if (newAcceptedTaxonNode == null) {
return null;
}
-
+
if (allEditorsClosed){
-
- operation = new ChangeAcceptedTaxonToSynonymOperation(event.getCommand().getName(), NavigationUtil.getUndoContext(), oldAcceptedTaxonNode, newAcceptedTaxonNode,
- taxonNavigator, taxonNavigator);
-
+
+ operation = new ChangeAcceptedTaxonToSynonymOperation(event.getCommand().getName(),
+ NavigationUtil.getUndoContext(),
+ oldAcceptedTaxonNode,
+ newAcceptedTaxonNode,
+ taxonNavigator,
+ taxonNavigator,
+ taxonNavigator);
+
NavigationUtil.executeOperation(operation);
//}
}
-
-
-
+
+
+
} catch (NotDefinedException e) {
MessagingUtils.warn(getClass(), "Command name not set");
}
return null;
}
}
-
-
+
+
return null;
-
+
}
/* (non-Javadoc)
* @see eu.etaxonomy.taxeditor.operations.IPostOperationEnabled#postOperation(eu.etaxonomy.cdm.model.common.CdmBase)
*/
/** {@inheritDoc} */
- public boolean postOperation(CdmBase objectAffectedByOperation) {
+ @Override
+ public boolean postOperation(CdmBase objectAffectedByOperation) {
Display.getDefault().asyncExec(new Runnable(){
- public void run() {
+ @Override
+ public void run() {
EditorUtil.close(editor.getMultiPageTaxonEditor());
-
+
try {
MultiPageTaxonEditor possibleOpenEditor = (MultiPageTaxonEditor) EditorUtil.findEditorByTaxonNodeUuid(newAcceptedTaxonNodeUuid);
if(possibleOpenEditor != null){
MessagingUtils.warningDialog("Could not create Taxon", this, e.getMessage());
}
}
-
+
});
-
-
+
+
return true;
}
*
* @return a boolean.
*/
- public boolean onComplete() {
+ @Override
+ public boolean onComplete() {
// TODO Auto-generated method stub
return false;
- }
+ }
}
import eu.etaxonomy.cdm.model.taxon.ITaxonTreeNode;
import eu.etaxonomy.cdm.model.taxon.TaxonNode;
import eu.etaxonomy.taxeditor.editor.TaxonEditorInput;
-import eu.etaxonomy.taxeditor.model.AbstractUtility;
import eu.etaxonomy.taxeditor.model.MessagingUtils;
import eu.etaxonomy.taxeditor.navigation.NavigationUtil;
import eu.etaxonomy.taxeditor.navigation.navigator.TaxonNavigator;
TreeSelection selection = (TreeSelection) HandlerUtil.getCurrentSelection(event);
+
+ String plural = selection.size() > 1 ? "s" : "";
+ // Prompt user for confirmation
+
+
+
Iterator selectionIterator = selection.iterator();
Set<ITaxonTreeNode> treeNodes = new HashSet<ITaxonTreeNode>();
}
AbstractPostOperation operation = null;
TaxonDeletionConfigurator config = new TaxonDeletionConfigurator();
+ config.setDeleteInAllClassifications(false);
+
if (treeNodes.size() == 1 ){
try {
ITaxonTreeNode treeNode = treeNodes.iterator().next();
ITaxonTreeNode taxonNode =treeNode;
TaxonNodeDeletionConfigurator configNodes = new TaxonNodeDeletionConfigurator();
+
//configNodes.setDeleteTaxon(false);
if (taxonNode instanceof Classification && taxonNode.hasChildNodes()){
if(!DeleteConfiguratorDialog.openConfirmWithConfigurator(config, HandlerUtil.getActiveShell(event), "Confirm Deletion", "Do you really want to delete the classification? The tree has children, they will be deleted, too.")){
"Do you really want to delete the selected node? It has childnodes, they will be deleted, too.",
MessageDialog.WARNING, new String[] { "Delete all children",
"Move children to parent node", "Skip" }, 0);
- int result = dialog.open();
+ int dialog_result = dialog.open();
- if (result == 0){
+ if (dialog_result == 0){
//delete all children
configNodes.setChildHandling(ChildHandling.DELETE);
config.setTaxonNodeConfig(configNodes);
- } else if (result == 1){
+ } else if (dialog_result == 1){
//move children
configNodes.setChildHandling(ChildHandling.MOVE_TO_PARENT);
config.setTaxonNodeConfig(configNodes);
- } else if (result == 2){
+ } else if (dialog_result == 2){
//skip
return null;
/*if(! MessageDialog.openConfirm(HandlerUtil.getActiveShell(event), "Confirm Deletion", "Do you really want to delete the selected nodes?")){
return null;
}*/
- operation = new DeleteOperation(
- event.getCommand().getName(), NavigationUtil.getUndoContext(),
- taxonNode, config, taxonNavigator, taxonNavigator);
- AbstractUtility.executeOperation(operation);
+ operation = new DeleteOperation(event.getCommand().getName(),
+ NavigationUtil.getUndoContext(),
+ taxonNode,
+ config,
+ taxonNavigator,
+ taxonNavigator,
+ taxonNavigator);
+
+ NavigationUtil.executeOperation(operation);
+
//}
}
return null;
}
if (allEditorsClosed){
- operation = new DeleteOperation(
- event.getCommand().getName(), NavigationUtil.getUndoContext(),
- treeNodes, new TaxonDeletionConfigurator(), taxonNavigator, taxonNavigator);
- AbstractUtility.executeOperation(operation);
+ operation = new DeleteOperation(event.getCommand().getName(),
+ NavigationUtil.getUndoContext(),
+ treeNodes,
+ new TaxonDeletionConfigurator(),
+ taxonNavigator,
+ taxonNavigator,
+ taxonNavigator);
+
+ NavigationUtil.executeOperation(operation);
+
}
}catch (NotDefinedException e) {
MessagingUtils.warn(getClass(), "Command name not set");
import java.util.List;
import java.util.UUID;
-import org.apache.commons.lang.StringUtils;
import org.apache.log4j.Logger;
import org.eclipse.core.commands.AbstractHandler;
import org.eclipse.core.commands.ExecutionEvent;
import eu.etaxonomy.cdm.api.service.ITaxonNodeService;
import eu.etaxonomy.cdm.api.service.ITaxonService;
import eu.etaxonomy.cdm.hibernate.HibernateProxyHelper;
-import eu.etaxonomy.cdm.model.common.Annotation;
-import eu.etaxonomy.cdm.model.common.AnnotationType;
-import eu.etaxonomy.cdm.model.common.Language;
-import eu.etaxonomy.cdm.model.description.TaxonDescription;
import eu.etaxonomy.cdm.model.taxon.Taxon;
import eu.etaxonomy.cdm.model.taxon.TaxonNode;
import eu.etaxonomy.taxeditor.editor.EditorUtil;
navigator.getConversationHolder(),
"Choose the accepted taxon",
excludeTaxa,
- null,
- null);
+ sourceTaxonNode,
+ sourceTaxonNode.getClassification());
if (dialogTaxonNode == null) {
return null;
}
"changes in the target taxon. Please save first.");
return null;
}
- for(TaxonDescription description : taxon.getDescriptions()){
- //reload to avoid session conflicts
- description = HibernateProxyHelper.deproxy(CdmStore.getService(IDescriptionService.class).load(description.getUuid()), TaxonDescription.class);
+ CdmStore.getService(IDescriptionService.class).moveTaxonDescriptions(taxon.getUuid(),targetTaxonNode.getTaxon().getUuid());
- String moveMessage = String.format("Description moved from %s", taxon);
- if(description.isProtectedTitleCache()){
- String separator = "";
- if(!StringUtils.isBlank(description.getTitleCache())){
- separator = " - ";
- }
- description.setTitleCache(description.getTitleCache() + separator + moveMessage, true);
- }
- Annotation annotation = Annotation.NewInstance(moveMessage, Language.getDefaultLanguage());
- annotation.setAnnotationType(AnnotationType.TECHNICAL());
- description.addAnnotation(annotation);
- targetTaxonNode.getTaxon().addDescription(description);
- CdmStore.getService(IDescriptionService.class).saveOrUpdate(description);
- navigator.getConversationHolder().bind();
- navigator.getConversationHolder().commit();
- }
+ navigator.getConversationHolder().bind();
+ navigator.getConversationHolder().commit();
Display.getDefault().asyncExec(new Runnable(){
import eu.etaxonomy.cdm.hibernate.HibernateProxyHelper;
import eu.etaxonomy.cdm.model.common.CdmBase;
+import eu.etaxonomy.cdm.model.taxon.Classification;
import eu.etaxonomy.cdm.model.taxon.TaxonNode;
import eu.etaxonomy.taxeditor.navigation.NavigationUtil;
import eu.etaxonomy.taxeditor.navigation.navigator.TaxonNavigator;
// TaxonNode taxonNode = (TaxonNode) selection.getFirstElement();
if (taxonNodes.size() >= 1){
+ Classification classification = taxonNodes.iterator().next().getClassification();
boolean moveToNewParent = true;
if (PreferencesUtil.getSortNodesNaturally()){
if(!MessageDialog.openQuestion(null, "Target node", "The choosen target node should be the parent?")){
moveToNewParent = false;
}
- parentTaxonNode = TaxonNodeSelectionDialog.select(HandlerUtil.getActiveShell(event), taxonNavigator.getConversationHolder(), "Choose the taxon above the moved taxon.", excludeTaxa, null, null);
+ parentTaxonNode = TaxonNodeSelectionDialog.select(HandlerUtil.getActiveShell(event), taxonNavigator.getConversationHolder(), "Choose the taxon above the moved taxon.", excludeTaxa, null, classification);
}else{
- parentTaxonNode = TaxonNodeSelectionDialog.select(HandlerUtil.getActiveShell(event), taxonNavigator.getConversationHolder(), "Choose new parent", excludeTaxa, null, null);
+ parentTaxonNode = TaxonNodeSelectionDialog.select(HandlerUtil.getActiveShell(event), taxonNavigator.getConversationHolder(), "Choose new parent", excludeTaxa, null, classification);
}
if(parentTaxonNode != null){
if(NavigationUtil.isDirty(parentTaxonNode)){
--- /dev/null
+// $Id$
+/**
+* Copyright (C) 2015 EDIT
+* European Distributed Institute of Taxonomy
+* http://www.e-taxonomy.eu
+*
+* The contents of this file are subject to the Mozilla Public License Version 1.1
+* See LICENSE.TXT at the top of this package for the full license terms.
+*/
+package eu.etaxonomy.taxeditor.navigation.navigator.handler;
+
+import org.eclipse.core.commands.ExecutionEvent;
+import org.eclipse.ui.IEditorInput;
+import org.eclipse.ui.IEditorReference;
+import org.eclipse.ui.IWorkbenchPage;
+import org.eclipse.ui.PartInitException;
+import org.eclipse.ui.handlers.HandlerUtil;
+
+import eu.etaxonomy.cdm.model.common.ITreeNode;
+import eu.etaxonomy.cdm.model.taxon.TaxonNode;
+import eu.etaxonomy.taxeditor.editor.TaxonEditorInput;
+
+/**
+ * @author cmathew
+ * @date 16 Jun 2015
+ *
+ */
+public class NavigatorHandlerUtils {
+
+ protected static boolean closeObsoleteEditor(ExecutionEvent event, TaxonNode taxonNode){
+ IWorkbenchPage activePage = HandlerUtil.getActiveWorkbenchWindow(event).getActivePage();
+ boolean result = true;
+ for (IEditorReference ref : activePage.getEditorReferences()) {
+ try {
+ String treeIndex = ((ITreeNode)taxonNode).treeIndex();
+
+
+ IEditorInput input = ref.getEditorInput();
+ if (input instanceof TaxonEditorInput) {
+ TaxonNode node = ((TaxonEditorInput) input).getTaxonNode();
+ //if node is a child of taxonNode then close the editor
+ if( ((ITreeNode) node).treeIndex().startsWith(treeIndex)){
+ //if (taxonNode.equals(node)) {
+ result &= activePage.closeEditor(ref.getEditor(false), true);
+
+ }
+ }
+ } catch (PartInitException e) {
+ continue;
+ }
+ }
+ return result;
+ }
+
+}
--- /dev/null
+/**
+ *
+ */
+package eu.etaxonomy.taxeditor.navigation.navigator.handler;
+
+import java.util.ArrayList;
+import java.util.List;
+import java.util.UUID;
+
+import org.apache.log4j.Logger;
+import org.eclipse.core.commands.ExecutionEvent;
+import org.eclipse.core.commands.operations.AbstractOperation;
+import org.eclipse.core.runtime.IStatus;
+import org.eclipse.core.runtime.Status;
+import org.eclipse.jface.viewers.TreeSelection;
+import org.eclipse.ui.handlers.HandlerUtil;
+
+import eu.etaxonomy.cdm.api.conversation.ConversationHolderMock;
+import eu.etaxonomy.cdm.model.taxon.ITaxonTreeNode;
+import eu.etaxonomy.cdm.model.taxon.TaxonNode;
+import eu.etaxonomy.taxeditor.navigation.navigator.TaxonNavigatorLabels;
+import eu.etaxonomy.taxeditor.navigation.navigator.operation.RemotingChangeAcceptedTaxonToSynonymOperation;
+import eu.etaxonomy.taxeditor.operation.RemotingCdmHandler;
+import eu.etaxonomy.taxeditor.ui.dialog.selection.TaxonNodeSelectionDialog;
+
+/**
+ * <p>ChangeAcceptedTaxonToSynonymHandler class.</p>
+ *
+ * @author n.hoffmann
+ * @created Jan 4, 2010
+ * @version 1.0
+ */
+public class RemotingChangeAcceptedTaxonToSynonymHandler extends RemotingCdmHandler {
+
+ private static final Logger logger = Logger
+ .getLogger(RemotingChangeAcceptedTaxonToSynonymHandler.class);
+
+
+ private ITaxonTreeNode oldTaxonNode;
+
+ /**
+ * @param label
+ */
+ public RemotingChangeAcceptedTaxonToSynonymHandler() {
+ super(TaxonNavigatorLabels.CHANGE_ACCEPTED_TAXON_TO_SYNONYM_LABEL);
+ }
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.operation.RemotingCdmHandler#allowOperations(org.eclipse.core.commands.ExecutionEvent)
+ */
+ @Override
+ public IStatus allowOperations(ExecutionEvent event) {
+ TreeSelection selection = (TreeSelection) HandlerUtil.getCurrentSelection(event);
+ // check that only a single taxon tree node has been selected
+ if(selection.size() > 1) {
+ return new Status(IStatus.ERROR,
+ "unknown",
+ TaxonNavigatorLabels.SINGLE_TAXON_SELECTION_MESSAGE);
+ }
+
+ // check for no taxon tree node selected
+ if(selection.size() == 0) {
+ return new Status(IStatus.ERROR,
+ "unknown",
+ TaxonNavigatorLabels.NO_TAXON_SELECTION_MESSAGE);
+ }
+
+ // check that selected object is a taxon node
+ Object obj = selection.iterator().next();
+ if(obj instanceof ITaxonTreeNode) {
+ oldTaxonNode = (ITaxonTreeNode)obj;
+ } else {
+ return new Status(IStatus.ERROR,
+ "unknown",
+ TaxonNavigatorLabels.SELECTED_OBJECT_NOT_TREE_NODE_MESSAGE);
+ }
+ // check that the source taxon node does not have children
+ if(((TaxonNode)oldTaxonNode).getCountChildren() > 0) {
+ return new Status(IStatus.ERROR,
+ "unknown",
+ TaxonNavigatorLabels.SOURCE_TAXON_HAS_CHILDREN_MESSAGE);
+
+ }
+
+ // check if corresponding name editor is closed
+ boolean editorClosed = NavigatorHandlerUtils.closeObsoleteEditor(event, (TaxonNode) oldTaxonNode);
+ if(editorClosed != true) {
+ return new Status(IStatus.ERROR,
+ "unknown",
+ TaxonNavigatorLabels.RELATED_EDITOR_NOT_CLOSED_MESSAGE);
+ }
+
+ return Status.OK_STATUS;
+ }
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.operation.RemotingCdmHandler#doOperations(org.eclipse.core.commands.ExecutionEvent)
+ */
+ @Override
+ public AbstractOperation prepareOperation(ExecutionEvent event) {
+ List<UUID> excludeTaxa = new ArrayList<UUID>();
+ excludeTaxa.add(oldTaxonNode.getUuid());
+ TaxonNode newAcceptedTaxonNode = TaxonNodeSelectionDialog.select(HandlerUtil.getActiveShell(event),
+ new ConversationHolderMock(),
+ "Choose the accepted taxon",
+ excludeTaxa,
+ null,
+ ((TaxonNode)oldTaxonNode).getClassification());
+
+ if (newAcceptedTaxonNode == null) {
+ return null;
+ }
+
+ RemotingChangeAcceptedTaxonToSynonymOperation rcattso =
+ new RemotingChangeAcceptedTaxonToSynonymOperation(event.getTrigger(),
+ false,
+ oldTaxonNode.getUuid(),
+ newAcceptedTaxonNode.getUuid());
+
+ return rcattso;
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.operation.RemotingCdmHandler#onComplete(org.eclipse.core.commands.ExecutionEvent)
+ */
+ @Override
+ public void onComplete() {
+ // TODO Auto-generated method stub
+
+ }
+
+
+
+
+}
--- /dev/null
+// $Id$
+/**
+ * Copyright (C) 2015 EDIT
+ * European Distributed Institute of Taxonomy
+ * http://www.e-taxonomy.eu
+ *
+ * The contents of this file are subject to the Mozilla Public License Version 1.1
+ * See LICENSE.TXT at the top of this package for the full license terms.
+ */
+package eu.etaxonomy.taxeditor.navigation.navigator.handler;
+
+import java.util.HashSet;
+import java.util.Iterator;
+import java.util.Set;
+
+import org.eclipse.core.commands.ExecutionEvent;
+import org.eclipse.core.commands.operations.AbstractOperation;
+import org.eclipse.core.runtime.IStatus;
+import org.eclipse.core.runtime.Status;
+import org.eclipse.jface.dialogs.MessageDialog;
+import org.eclipse.jface.viewers.TreeSelection;
+import org.eclipse.ui.IWorkbenchPage;
+import org.eclipse.ui.handlers.HandlerUtil;
+
+import eu.etaxonomy.cdm.api.service.config.TaxonDeletionConfigurator;
+import eu.etaxonomy.cdm.api.service.config.TaxonNodeDeletionConfigurator;
+import eu.etaxonomy.cdm.api.service.config.TaxonNodeDeletionConfigurator.ChildHandling;
+import eu.etaxonomy.cdm.model.taxon.Classification;
+import eu.etaxonomy.cdm.model.taxon.ITaxonTreeNode;
+import eu.etaxonomy.cdm.model.taxon.TaxonNode;
+import eu.etaxonomy.taxeditor.editor.EditorUtil;
+import eu.etaxonomy.taxeditor.navigation.navigator.TaxonNavigatorLabels;
+import eu.etaxonomy.taxeditor.navigation.navigator.operation.RemotingDeleteTaxonNodeOperation;
+import eu.etaxonomy.taxeditor.operation.RemotingCdmHandler;
+import eu.etaxonomy.taxeditor.ui.dialog.deleteConfigurator.DeleteConfiguratorDialog;
+
+/**
+ * @author cmathew
+ * @date 22 Jun 2015
+ *
+ */
+public class RemotingDeleteTaxonNodeHandler extends RemotingCdmHandler {
+
+ private TaxonDeletionConfigurator config;
+ private Set<ITaxonTreeNode> treeNodes;
+
+ /**
+ * @param label
+ */
+ public RemotingDeleteTaxonNodeHandler() {
+ super(TaxonNavigatorLabels.DELETE_TAXON_NODE_LABEL);
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.operation.RemotingCdmHandler#allowOperations(org.eclipse.core.commands.ExecutionEvent)
+ */
+ @Override
+ public IStatus allowOperations(ExecutionEvent event) {
+ TreeSelection selection = (TreeSelection) HandlerUtil.getCurrentSelection(event);
+
+ Iterator selectionIterator = selection.iterator();
+ treeNodes = new HashSet<ITaxonTreeNode>();
+
+ while (selectionIterator.hasNext()){
+ Object object = selectionIterator.next();
+ if(object instanceof ITaxonTreeNode) {
+ treeNodes.add((ITaxonTreeNode) object);
+ }
+ }
+ boolean allEditorsClosed = true;
+ IWorkbenchPage activePage = HandlerUtil.getActiveWorkbenchWindow(event).getActivePage();
+ for (ITaxonTreeNode treeNode : treeNodes) {
+ if(treeNode instanceof TaxonNode) {
+ allEditorsClosed &= EditorUtil.closeObsoleteEditor((TaxonNode) treeNode, activePage);
+ }
+ }
+ if(!allEditorsClosed) {
+ return new Status(IStatus.WARNING,
+ "unknown",
+ TaxonNavigatorLabels.RELATED_EDITOR_NOT_CLOSED_MESSAGE);
+ }
+
+ config = new TaxonDeletionConfigurator();
+
+ if (treeNodes.size() == 1 ){
+
+ ITaxonTreeNode treeNode = treeNodes.iterator().next();
+ ITaxonTreeNode taxonNode = treeNode;
+ TaxonNodeDeletionConfigurator configNodes = new TaxonNodeDeletionConfigurator();
+ if (taxonNode instanceof Classification && taxonNode.hasChildNodes()){
+ if(!DeleteConfiguratorDialog.openConfirmWithConfigurator(config, HandlerUtil.getActiveShell(event), "Confirm Deletion", "Do you really want to delete the classification? The tree has children, they will be deleted, too.")){
+ return Status.CANCEL_STATUS;
+ }
+ } else if (taxonNode instanceof Classification && !taxonNode.hasChildNodes()){
+ if(!DeleteConfiguratorDialog.openConfirmWithConfigurator(config, HandlerUtil.getActiveShell(event), "Confirm Deletion", "Do you really want to delete the classification?")){
+ return Status.CANCEL_STATUS;
+ }
+ } else {
+
+ if (taxonNode.hasChildNodes()){
+ DeleteConfiguratorDialog dialog = new DeleteConfiguratorDialog(
+ config,
+ HandlerUtil.getActiveShell(event),
+ "Confirm Deletion",
+ null,
+ "Do you really want to delete the selected node? It has childnodes, they will be deleted, too.",
+ MessageDialog.WARNING, new String[] { "Delete all children",
+ "Move children to parent node", "Skip" }, 0);
+ int result = dialog.open();
+
+ if (result == 0){
+ //delete all children
+ configNodes.setChildHandling(ChildHandling.DELETE);
+ config.setTaxonNodeConfig(configNodes);
+ } else if (result == 1){
+ //move children
+ configNodes.setChildHandling(ChildHandling.MOVE_TO_PARENT);
+ config.setTaxonNodeConfig(configNodes);
+ } else if (result == 2){
+ return Status.CANCEL_STATUS;
+ }
+ } else{
+ if(!DeleteConfiguratorDialog.openConfirmWithConfigurator(configNodes, HandlerUtil.getActiveShell(event), "Confirm Deletion", "Do you really want to delete the selected node?")){
+ return Status.CANCEL_STATUS;
+ }
+ config.setTaxonNodeConfig(configNodes);
+ }
+ }
+ }
+ return Status.OK_STATUS;
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.operation.RemotingCdmHandler#prepareOperation(org.eclipse.core.commands.ExecutionEvent)
+ */
+ @Override
+ public AbstractOperation prepareOperation(ExecutionEvent event) {
+ return new RemotingDeleteTaxonNodeOperation(event.getTrigger(),
+ false,
+ treeNodes,
+ config);
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.operation.RemotingCdmHandler#onComplete()
+ */
+ @Override
+ public void onComplete() {
+ // TODO Auto-generated method stub
+
+ }
+
+}
--- /dev/null
+// $Id$
+/**
+* Copyright (C) 2015 EDIT
+* European Distributed Institute of Taxonomy
+* http://www.e-taxonomy.eu
+*
+* The contents of this file are subject to the Mozilla Public License Version 1.1
+* See LICENSE.TXT at the top of this package for the full license terms.
+*/
+package eu.etaxonomy.taxeditor.navigation.navigator.handler;
+
+import java.util.ArrayList;
+import java.util.List;
+import java.util.UUID;
+
+import org.eclipse.core.commands.ExecutionEvent;
+import org.eclipse.core.commands.operations.AbstractOperation;
+import org.eclipse.core.runtime.IStatus;
+import org.eclipse.core.runtime.Status;
+import org.eclipse.jface.viewers.TreeSelection;
+import org.eclipse.swt.widgets.Display;
+import org.eclipse.ui.PartInitException;
+import org.eclipse.ui.handlers.HandlerUtil;
+
+import eu.etaxonomy.cdm.api.conversation.ConversationHolderMock;
+import eu.etaxonomy.cdm.model.taxon.ITaxonTreeNode;
+import eu.etaxonomy.cdm.model.taxon.TaxonNode;
+import eu.etaxonomy.taxeditor.editor.EditorUtil;
+import eu.etaxonomy.taxeditor.editor.MultiPageTaxonEditor;
+import eu.etaxonomy.taxeditor.model.AbstractUtility;
+import eu.etaxonomy.taxeditor.model.MessagingUtils;
+import eu.etaxonomy.taxeditor.navigation.NavigationUtil;
+import eu.etaxonomy.taxeditor.navigation.navigator.TaxonNavigatorLabels;
+import eu.etaxonomy.taxeditor.navigation.navigator.operation.RemotingMoveFactualDataOperation;
+import eu.etaxonomy.taxeditor.operation.RemotingCdmHandler;
+import eu.etaxonomy.taxeditor.ui.dialog.selection.TaxonNodeSelectionDialog;
+
+/**
+ * @author cmathew
+ * @date 19 Jun 2015
+ *
+ */
+public class RemotingMoveFactualDataHandler extends RemotingCdmHandler {
+
+
+ private TaxonNode sourceTaxonNode;
+ private TaxonNode targetTaxonNode;
+ /**
+ * @param label
+ */
+ public RemotingMoveFactualDataHandler() {
+ super(TaxonNavigatorLabels.MOVE_FACTUAL_DATA_LABEL);
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.operation.RemotingCdmHandler#allowOperations(org.eclipse.core.commands.ExecutionEvent)
+ */
+ @Override
+ public IStatus allowOperations(ExecutionEvent event) {
+ TreeSelection selection = (TreeSelection) HandlerUtil.getCurrentSelection(event);
+ // check that only a single taxon tree node has been selected
+ if(selection.size() > 1) {
+ return new Status(IStatus.ERROR,
+ "unknown",
+ TaxonNavigatorLabels.SINGLE_TAXON_SELECTION_MESSAGE);
+ }
+
+ // check for no taxon tree node selected
+ if(selection.size() == 0) {
+ return new Status(IStatus.ERROR,
+ "unknown",
+ TaxonNavigatorLabels.NO_TAXON_SELECTION_MESSAGE);
+ }
+
+ // check that selected object is a taxon node
+ Object obj = selection.iterator().next();
+ if(obj instanceof ITaxonTreeNode) {
+ sourceTaxonNode = (TaxonNode)obj;
+ } else {
+ return new Status(IStatus.ERROR,
+ "unknown",
+ TaxonNavigatorLabels.SELECTED_OBJECT_NOT_TREE_NODE_MESSAGE);
+ }
+
+ if(NavigationUtil.isDirty(sourceTaxonNode)) {
+ return new Status(IStatus.ERROR,
+ "unknown",
+ TaxonNavigatorLabels.UNSAVED_CHANGES_MESSAGE);
+ }
+
+ List<UUID> excludeTaxa = new ArrayList<UUID>();
+ excludeTaxa.add(sourceTaxonNode.getTaxon().getUuid());
+
+ targetTaxonNode = TaxonNodeSelectionDialog.select(HandlerUtil.getActiveShell(event),
+ new ConversationHolderMock(),
+ "Choose the accepted taxon",
+ excludeTaxa,
+ null,
+ null);
+
+ if(targetTaxonNode == null) {
+ return new Status(IStatus.CANCEL,
+ "unknown",
+ "");
+ }
+ if(NavigationUtil.isDirty(targetTaxonNode)){
+ return new Status(IStatus.ERROR,
+ "unknown",
+ TaxonNavigatorLabels.UNSAVED_CHANGES_MESSAGE);
+ }
+ return Status.OK_STATUS;
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.operation.RemotingCdmHandler#prepareOperation(org.eclipse.core.commands.ExecutionEvent)
+ */
+ @Override
+ public AbstractOperation prepareOperation(ExecutionEvent event) {
+ return new RemotingMoveFactualDataOperation(event.getTrigger(),
+ false,
+ sourceTaxonNode.getTaxon().getUuid(),
+ targetTaxonNode.getTaxon().getUuid());
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.operation.RemotingCdmHandler#onComplete()
+ */
+ @Override
+ public void onComplete() {
+ Display.getDefault().asyncExec(new Runnable(){
+ @Override
+ public void run() {
+ try {
+ //close and re-open to refresh factual data view
+ MultiPageTaxonEditor sourceEditor = (MultiPageTaxonEditor) EditorUtil.findEditorByTaxonNodeUuid(sourceTaxonNode.getUuid());
+ MultiPageTaxonEditor targetEditor = (MultiPageTaxonEditor) EditorUtil.findEditorByTaxonNodeUuid(targetTaxonNode.getUuid());
+ if(targetEditor != null){
+ AbstractUtility.close(sourceEditor);
+ AbstractUtility.close(targetEditor);
+ }
+ EditorUtil.openTaxonNode(sourceTaxonNode.getUuid());
+ EditorUtil.openTaxonNode(targetTaxonNode.getUuid());
+ } catch (PartInitException e) {
+ MessagingUtils.error(this.getClass(), e);
+ throw new RuntimeException(e);
+ } catch (Exception e) {
+ MessagingUtils.warningDialog("Could not create Taxon", this, e.getMessage());
+ }
+ }
+
+ });
+
+ }
+
+}
--- /dev/null
+// $Id$
+/**
+ * Copyright (C) 2015 EDIT
+ * European Distributed Institute of Taxonomy
+ * http://www.e-taxonomy.eu
+ *
+ * The contents of this file are subject to the Mozilla Public License Version 1.1
+ * See LICENSE.TXT at the top of this package for the full license terms.
+ */
+package eu.etaxonomy.taxeditor.navigation.navigator.handler;
+
+import java.util.ArrayList;
+import java.util.List;
+import java.util.UUID;
+
+import org.eclipse.core.commands.ExecutionEvent;
+import org.eclipse.core.commands.operations.AbstractOperation;
+import org.eclipse.core.runtime.IStatus;
+import org.eclipse.core.runtime.Status;
+import org.eclipse.jface.dialogs.MessageDialog;
+import org.eclipse.jface.viewers.TreeSelection;
+import org.eclipse.swt.widgets.Shell;
+import org.eclipse.ui.handlers.HandlerUtil;
+
+import eu.etaxonomy.cdm.api.conversation.ConversationHolderMock;
+import eu.etaxonomy.cdm.model.taxon.TaxonNode;
+import eu.etaxonomy.taxeditor.navigation.NavigationUtil;
+import eu.etaxonomy.taxeditor.navigation.navigator.TaxonNavigatorLabels;
+import eu.etaxonomy.taxeditor.navigation.navigator.operation.RemotingMoveTaxonOperation;
+import eu.etaxonomy.taxeditor.operation.RemotingCdmHandler;
+import eu.etaxonomy.taxeditor.preference.PreferencesUtil;
+import eu.etaxonomy.taxeditor.ui.dialog.selection.TaxonNodeSelectionDialog;
+
+/**
+ * @author cmathew
+ * @date 19 Jun 2015
+ *
+ */
+public class RemotingMoveTaxonNodeHandler extends RemotingCdmHandler {
+
+ private TaxonNode oldTaxonNode;
+
+ public RemotingMoveTaxonNodeHandler() {
+ super(TaxonNavigatorLabels.MOVE_TAXON_LABEL);
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.operation.RemotingCdmHandler#allowOperations(org.eclipse.core.commands.ExecutionEvent)
+ */
+ @Override
+ public IStatus allowOperations(ExecutionEvent event) {
+ TreeSelection selection = (TreeSelection) HandlerUtil.getCurrentSelection(event);
+ // check that only a single taxon tree node has been selected
+ if(selection.size() > 1) {
+ return new Status(IStatus.ERROR,
+ "unknown",
+ TaxonNavigatorLabels.SINGLE_TAXON_SELECTION_MESSAGE);
+ }
+
+ // check for no taxon tree node selected
+ if(selection.size() == 0) {
+ return new Status(IStatus.ERROR,
+ "unknown",
+ TaxonNavigatorLabels.NO_TAXON_SELECTION_MESSAGE);
+ }
+ // check that selected object is a taxon node
+ Object obj = selection.iterator().next();
+ if(obj instanceof TaxonNode) {
+ oldTaxonNode = (TaxonNode)obj;
+ } else {
+ return new Status(IStatus.ERROR,
+ "unknown",
+ TaxonNavigatorLabels.SELECTED_OBJECT_NOT_TREE_NODE_MESSAGE);
+ }
+ return Status.OK_STATUS;
+ }
+
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.operation.RemotingCdmHandler#prepareOperation(org.eclipse.core.commands.ExecutionEvent)
+ */
+ @Override
+ public AbstractOperation prepareOperation(ExecutionEvent event) {
+ Shell activeShell = HandlerUtil.getActiveShell(event);
+ TaxonNode parentTaxonNode;
+
+ List<UUID> excludeTaxa = new ArrayList<UUID>();
+ excludeTaxa.add(oldTaxonNode.getUuid());
+
+ boolean moveToNewParent = true;
+
+ if (PreferencesUtil.getSortNodesNaturally()){
+ if(!MessageDialog.openQuestion(activeShell, "Target node", "The choosen target node should be the parent?")){
+ moveToNewParent = false;
+ }
+ parentTaxonNode = TaxonNodeSelectionDialog.select(activeShell,
+ new ConversationHolderMock(),
+ "Choose the taxon above the moved taxon.",
+ excludeTaxa,
+ null,
+ null);
+ } else {
+ parentTaxonNode = TaxonNodeSelectionDialog.select(activeShell,
+ new ConversationHolderMock(),
+ "Choose new parent",
+ excludeTaxa,
+ null,
+ null);
+ }
+
+
+ if(parentTaxonNode != null){
+ if(NavigationUtil.isDirty(parentTaxonNode)){
+ MessageDialog.openWarning(activeShell,
+ "Unsaved Parent Taxon",
+ "There are unsaved changes in the parent taxon. Please save first.");
+ return null;
+ }
+
+ return new RemotingMoveTaxonOperation(event.getTrigger(),
+ false,
+ oldTaxonNode.getUuid(),
+ parentTaxonNode.getUuid(),
+ moveToNewParent);
+ }
+
+ return null;
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.operation.RemotingCdmHandler#onComplete()
+ */
+ @Override
+ public void onComplete() {
+ // TODO Auto-generated method stub
+
+ }
+
+}
import org.eclipse.core.runtime.IProgressMonitor;
import org.eclipse.core.runtime.IStatus;
import org.eclipse.core.runtime.Status;
-import org.eclipse.jface.dialogs.MessageDialog;
import eu.etaxonomy.cdm.api.conversation.IConversationEnabled;
-import eu.etaxonomy.cdm.api.service.DeleteResult;
import eu.etaxonomy.cdm.api.service.ITaxonNodeService;
+import eu.etaxonomy.cdm.api.service.UpdateResult;
import eu.etaxonomy.cdm.api.service.config.TaxonDeletionConfigurator;
import eu.etaxonomy.cdm.hibernate.HibernateProxyHelper;
import eu.etaxonomy.cdm.model.taxon.ITaxonTreeNode;
import eu.etaxonomy.taxeditor.model.MessagingUtils;
import eu.etaxonomy.taxeditor.navigation.internal.TaxeditorNavigationPlugin;
import eu.etaxonomy.taxeditor.operation.IPostOperationEnabled;
+import eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled;
import eu.etaxonomy.taxeditor.store.CdmStore;
/**
DeleteOperation {
private final TaxonNode newAcceptedTaxonNode;
+ private final ICdmEntitySessionEnabled cdmEntitySessionEnabled;
+
//private TaxonNode oldTaxonNode;
* @param conversationEnabled a {@link eu.etaxonomy.cdm.api.conversation.IConversationEnabled} object.
*/
public ChangeAcceptedTaxonToSynonymOperation(String label,
- IUndoContext undoContext, ITaxonTreeNode oldTaxonNode, TaxonNode newAcceptedTaxonNode,
- IPostOperationEnabled postOperationEnabled, IConversationEnabled conversationEnabled) {
- super(label, undoContext, oldTaxonNode, new TaxonDeletionConfigurator(),postOperationEnabled, conversationEnabled);
+ IUndoContext undoContext,
+ ITaxonTreeNode oldTaxonNode,
+ TaxonNode newAcceptedTaxonNode,
+ IPostOperationEnabled postOperationEnabled,
+ IConversationEnabled conversationEnabled,
+ ICdmEntitySessionEnabled cdmEntitySessionEnabled) {
+ super(label, undoContext, oldTaxonNode, new TaxonDeletionConfigurator(),postOperationEnabled, conversationEnabled, cdmEntitySessionEnabled);
this.newAcceptedTaxonNode = newAcceptedTaxonNode;
+ this.cdmEntitySessionEnabled = cdmEntitySessionEnabled;
}
monitor.worked(20);
bind();
- Taxon oldTaxon = (Taxon) HibernateProxyHelper.deproxy(((TaxonNode) taxonNode).getTaxon());
+
+ Taxon oldTaxon = HibernateProxyHelper.deproxy(((TaxonNode) taxonNode).getTaxon(), Taxon.class);
+ Taxon newAcceptedTaxon = HibernateProxyHelper.deproxy(newAcceptedTaxonNode.getTaxon(), Taxon.class);
+
try {
- DeleteResult result = CdmStore.getService(ITaxonNodeService.class).makeTaxonNodeASynonymOfAnotherTaxonNode((TaxonNode) taxonNode, newAcceptedTaxonNode, null, null, null);
-
+ UpdateResult result = CdmStore.getService(ITaxonNodeService.class).makeTaxonNodeASynonymOfAnotherTaxonNode(taxonNode.getUuid(), newAcceptedTaxonNode.getUuid(), null, null, null);
+
+
if (!result.getExceptions().isEmpty() && result.isOk()){
String separator = ", ";
String exceptionString = "";
for (Exception exception : result.getExceptions()) {
exceptionString += exception.getLocalizedMessage()+separator;
}
-
- MessagingUtils.informationDialog("Synonym created but taxon is not deleted.", exceptionString);
+
+ MessagingUtils.informationDialog("Synonym created but taxon is not deleted.", exceptionString);
} else if (result.isAbort() || result.isError()){
MessagingUtils.errorDialog("Synonym could not created", null, result.toString(), TaxeditorNavigationPlugin.PLUGIN_ID, null, true);
}
MessagingUtils.errorDialog("Operation failed", this, e.getMessage(), TaxeditorNavigationPlugin.PLUGIN_ID, e, false);
return Status.CANCEL_STATUS;
}
-
+
monitor.worked(40);
return postExecute(oldTaxon);
// $Id$
/**
-* Copyright (C) 2007 EDIT
-* European Distributed Institute of Taxonomy
-* http://www.e-taxonomy.eu
-*
-* The contents of this file are subject to the Mozilla Public License Version 1.1
-* See LICENSE.TXT at the top of this package for the full license terms.
-*/
+ * Copyright (C) 2007 EDIT
+ * European Distributed Institute of Taxonomy
+ * http://www.e-taxonomy.eu
+ *
+ * The contents of this file are subject to the Mozilla Public License Version 1.1
+ * See LICENSE.TXT at the top of this package for the full license terms.
+ */
package eu.etaxonomy.taxeditor.navigation.navigator.operation;
+import java.util.HashSet;
import java.util.Set;
+import java.util.UUID;
import org.eclipse.core.commands.ExecutionException;
import org.eclipse.core.commands.operations.IUndoContext;
import org.eclipse.core.runtime.IAdaptable;
import org.eclipse.core.runtime.IProgressMonitor;
import org.eclipse.core.runtime.IStatus;
-import org.eclipse.jface.dialogs.MessageDialog;
import eu.etaxonomy.cdm.api.application.ICdmApplicationConfiguration;
import eu.etaxonomy.cdm.api.conversation.IConversationEnabled;
import eu.etaxonomy.cdm.model.taxon.Classification;
import eu.etaxonomy.cdm.model.taxon.ITaxonTreeNode;
import eu.etaxonomy.cdm.model.taxon.TaxonNode;
-import eu.etaxonomy.taxeditor.model.MessagingUtils;
+import eu.etaxonomy.taxeditor.model.DeleteResultMessagingUtils;
+import eu.etaxonomy.taxeditor.navigation.internal.TaxeditorNavigationPlugin;
import eu.etaxonomy.taxeditor.operation.AbstractPersistentPostOperation;
import eu.etaxonomy.taxeditor.operation.IPostOperationEnabled;
+import eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled;
import eu.etaxonomy.taxeditor.store.CdmStore;
/**
*/
public class DeleteOperation extends AbstractPersistentPostOperation{
- private Set<ITaxonTreeNode> treeNodes;
- protected final TaxonDeletionConfigurator config;
+ private Set<ITaxonTreeNode> treeNodes;
+ protected final TaxonDeletionConfigurator config;
+ private final ICdmEntitySessionEnabled cdmEntitySessionEnabled;
+
+ /**
+ * <p>Constructor for DeleteTreeNodeOperation.</p>
+ *
+ * @param label a {@link java.lang.String} object.
+ * @param undoContext a {@link org.eclipse.core.commands.operations.IUndoContext} object.
+ * @param postOperationEnabled a {@link eu.etaxonomy.taxeditor.operation.IPostOperationEnabled} object.
+ * @param conversationEnabled a {@link eu.etaxonomy.cdm.api.conversation.IConversationEnabled} object.
+ * @param treeNodes a {@link java.util.Set} object.
+ */
+ public DeleteOperation(String label, IUndoContext undoContext,
+ ITaxonTreeNode taxonNode, TaxonDeletionConfigurator config,
+ IPostOperationEnabled postOperationEnabled,
+ IConversationEnabled conversationEnabled,
+ ICdmEntitySessionEnabled cdmEntitySessionEnabled) {
+ super(label, undoContext, postOperationEnabled, conversationEnabled, cdmEntitySessionEnabled);
+ this.taxonNode = (ITaxonTreeNode)CdmBase.deproxy(taxonNode, CdmBase.class);
+ this.config = config;
+ this.cdmEntitySessionEnabled = cdmEntitySessionEnabled;
+ }
+
+ /**
+ * <p>Constructor for DeleteTreeNodeOperation.</p>
+ *
+ * @param label a {@link java.lang.String} object.
+ * @param undoContext a {@link org.eclipse.core.commands.operations.IUndoContext} object.
+ * @param postOperationEnabled a {@link eu.etaxonomy.taxeditor.operation.IPostOperationEnabled} object.
+ * @param conversationEnabled a {@link eu.etaxonomy.cdm.api.conversation.IConversationEnabled} object.
+ * @param treeNodes a {@link java.util.Set} object.
+ */
+ public DeleteOperation(String label, IUndoContext undoContext,
+ Set<ITaxonTreeNode> treeNodes, TaxonDeletionConfigurator config,
+ IPostOperationEnabled postOperationEnabled,
+ IConversationEnabled conversationEnabled,
+ ICdmEntitySessionEnabled cdmEntitySessionEnabled) {
+ super(label, undoContext, postOperationEnabled, conversationEnabled, cdmEntitySessionEnabled);
+ this.treeNodes = treeNodes;
+ this.config = config;
+ this.cdmEntitySessionEnabled = cdmEntitySessionEnabled;
+ }
- /**
- * <p>Constructor for DeleteTreeNodeOperation.</p>
- *
- * @param label a {@link java.lang.String} object.
- * @param undoContext a {@link org.eclipse.core.commands.operations.IUndoContext} object.
- * @param postOperationEnabled a {@link eu.etaxonomy.taxeditor.operation.IPostOperationEnabled} object.
- * @param conversationEnabled a {@link eu.etaxonomy.cdm.api.conversation.IConversationEnabled} object.
- * @param treeNodes a {@link java.util.Set} object.
- */
- public DeleteOperation(String label, IUndoContext undoContext,
- ITaxonTreeNode taxonNode, TaxonDeletionConfigurator config,
- IPostOperationEnabled postOperationEnabled,
- IConversationEnabled conversationEnabled) {
- super(label, undoContext, postOperationEnabled, conversationEnabled);
- this.taxonNode = (ITaxonTreeNode)CdmBase.deproxy(taxonNode, CdmBase.class);
- this.config = config;
- }
-
- /**
- * <p>Constructor for DeleteTreeNodeOperation.</p>
- *
- * @param label a {@link java.lang.String} object.
- * @param undoContext a {@link org.eclipse.core.commands.operations.IUndoContext} object.
- * @param postOperationEnabled a {@link eu.etaxonomy.taxeditor.operation.IPostOperationEnabled} object.
- * @param conversationEnabled a {@link eu.etaxonomy.cdm.api.conversation.IConversationEnabled} object.
- * @param treeNodes a {@link java.util.Set} object.
- */
- public DeleteOperation(String label, IUndoContext undoContext,
- Set<ITaxonTreeNode> treeNodes, TaxonDeletionConfigurator config,
- IPostOperationEnabled postOperationEnabled,
- IConversationEnabled conversationEnabled) {
- super(label, undoContext, postOperationEnabled, conversationEnabled);
- this.treeNodes = treeNodes;
- this.config = config;
- }
/* (non-Javadoc)
DeleteResult result = service.deleteTaxonNode((TaxonNode)taxonNode, config);
if (result.isError() && !result.getExceptions().isEmpty()){
- //TODO:Error message!
- MessageDialog.openError(null, "Delete failed", result.getExceptions().iterator().next().getMessage());
+
+ DeleteResultMessagingUtils.messageDialogWithDetails(result, "TaxonNode could not be deleted.", TaxeditorNavigationPlugin.PLUGIN_ID);
} else if (!result.getExceptions().isEmpty()){
String separator = ", ";
String exceptionString = "";
- int count = 1;
for (Exception exception : result.getExceptions()) {
- exceptionString += exception.getLocalizedMessage();
- if (count < result.getExceptions().size()){
- exceptionString += separator;
- }
+ exceptionString += exception.getLocalizedMessage()+separator;
}
- MessagingUtils.informationDialog("Delete of the node was successful but the taxon could not be deleted.", exceptionString);
+ DeleteResultMessagingUtils.messageDialogWithDetails(result, "TaxonNode was successfully deleted, but related object(s) could not be deleted", TaxeditorNavigationPlugin.PLUGIN_ID);
}
}else if(taxonNode != null && taxonNode instanceof Classification){
Classification taxonomicTree = (Classification) taxonNode;
- /*if(taxonomicTree.hasChildNodes()){
- if(! MessageDialog.openConfirm(null, "Confirm Deletion", "The selected tree has children, do yu realy want to delete the whole tree with its children?")){
- return null;
- }
- }*/
-
- DeleteResult result = CdmStore.getService(IClassificationService.class).delete(taxonomicTree);
- if (result.isError() && !result.getExceptions().isEmpty()){
- String separator = ", ";
- String exceptionString = "";
- for (Exception exception : result.getExceptions()) {
- exceptionString += exception.getLocalizedMessage()+separator;
- }
- MessagingUtils.error(null, exceptionString, result.getExceptions().iterator().next());
- }
-
- /*}else{
- try{
- CdmStore.getService(IClassificationService.class).delete(taxonomicTree);
- }catch(ReferencedObjectUndeletableException e){
- throw new ExecutionException(e.getMessage());
- }
- }*/
- } else {
- DeleteResult result =service.deleteTaxonNodes(treeNodes, config);
- if (result.isError() && !result.getExceptions().isEmpty()){
- String separator = ", ";
- String exceptionString = "";
- for (Exception exception : result.getExceptions()) {
- exceptionString += exception.getLocalizedMessage()+separator;
- }
- MessagingUtils.error(null, exceptionString, result.getExceptions().iterator().next());
- }
+ DeleteResult result = CdmStore.getService(IClassificationService.class).delete(taxonomicTree.getUuid());
+ if (result.isError() && !result.getExceptions().isEmpty()){
+ //TODO:Error message!
+ DeleteResultMessagingUtils.messageDialogWithDetails(result, "TaxonNode could not be deleted.", TaxeditorNavigationPlugin.PLUGIN_ID);
+ }
+ } else {
+ Set<UUID> treeNodeUuids = new HashSet<UUID>();
+ ITaxonTreeNode entity = null;
+ for(ITaxonTreeNode treeNode : treeNodes) {
+ if(entity == null) {
+ entity = treeNode;
+ }
+ treeNodeUuids.add(treeNode.getUuid());
+ }
+
+ DeleteResult result = service.deleteTaxonNodes(treeNodeUuids, config);
+ if (result.isError() && !result.getExceptions().isEmpty()){
+ //TODO:Error message!
+ DeleteResultMessagingUtils.messageDialogWithDetails(result, "TaxonNode could not be deleted.", TaxeditorNavigationPlugin.PLUGIN_ID);
}
- monitor.worked(40);
- return postExecute(null);
- }
-
- /* (non-Javadoc)
- * @see org.eclipse.core.commands.operations.AbstractOperation#redo(org.eclipse.core.runtime.IProgressMonitor, org.eclipse.core.runtime.IAdaptable)
- */
- /** {@inheritDoc} */
- @Override
- public IStatus redo(IProgressMonitor monitor, IAdaptable info)
- throws ExecutionException {
- return null;
- }
-
- /* (non-Javadoc)
- * @see org.eclipse.core.commands.operations.AbstractOperation#undo(org.eclipse.core.runtime.IProgressMonitor, org.eclipse.core.runtime.IAdaptable)
- */
- /** {@inheritDoc} */
- @Override
- public IStatus undo(IProgressMonitor monitor, IAdaptable info)
- throws ExecutionException {
- return null;
- }
+ }
+
+ monitor.worked(40);
+
+ return postExecute(null);
+ }
+
+ /* (non-Javadoc)
+ * @see org.eclipse.core.commands.operations.AbstractOperation#redo(org.eclipse.core.runtime.IProgressMonitor, org.eclipse.core.runtime.IAdaptable)
+ */
+ /** {@inheritDoc} */
+ @Override
+ public IStatus redo(IProgressMonitor monitor, IAdaptable info)
+ throws ExecutionException {
+ return null;
+ }
+
+ /* (non-Javadoc)
+ * @see org.eclipse.core.commands.operations.AbstractOperation#undo(org.eclipse.core.runtime.IProgressMonitor, org.eclipse.core.runtime.IAdaptable)
+ */
+ /** {@inheritDoc} */
+ @Override
+ public IStatus undo(IProgressMonitor monitor, IAdaptable info)
+ throws ExecutionException {
+ return null;
+ }
}
// $Id$
/**
* Copyright (C) 2007 EDIT
-* European Distributed Institute of Taxonomy
+* European Distributed Institute of Taxonomy
* http://www.e-taxonomy.eu
-*
+*
* The contents of this file are subject to the Mozilla Public License Version 1.1
* See LICENSE.TXT at the top of this package for the full license terms.
*/
import eu.etaxonomy.cdm.model.taxon.Classification;
import eu.etaxonomy.taxeditor.operation.AbstractPersistentPostOperation;
import eu.etaxonomy.taxeditor.operation.IPostOperationEnabled;
+import eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled;
import eu.etaxonomy.taxeditor.store.CdmStore;
/**
* @version 1.0
*/
public class EditClassificationOperation extends AbstractPersistentPostOperation {
- private Classification classification;
+ private final Classification classification;
/**
* <p>Constructor for EditTaxonomicTreeOperation.</p>
*/
public EditClassificationOperation(String label, IUndoContext undoContext, Classification classification,
IPostOperationEnabled postOperationEnabled,
- IConversationEnabled conversationEnabled) {
- super(label, undoContext, postOperationEnabled, conversationEnabled);
-
+ IConversationEnabled conversationEnabled,
+ ICdmEntitySessionEnabled cdmEntitySessionEnabled) {
+ super(label, undoContext, postOperationEnabled, conversationEnabled, cdmEntitySessionEnabled);
+
this.classification = classification;
}
-
+
/* (non-Javadoc)
* @see org.eclipse.core.commands.operations.AbstractOperation#execute(org.eclipse.core.runtime.IProgressMonitor, org.eclipse.core.runtime.IAdaptable)
*/
public IStatus execute(IProgressMonitor monitor, IAdaptable info)
throws ExecutionException {
bind();
-
+
CdmStore.getService(IClassificationService.class).save(classification);
-
+
monitor.worked(40);
return postExecute(classification);
-
+
}
/* (non-Javadoc)
--- /dev/null
+// $Id$
+/**
+* Copyright (C) 2015 EDIT
+* European Distributed Institute of Taxonomy
+* http://www.e-taxonomy.eu
+*
+* The contents of this file are subject to the Mozilla Public License Version 1.1
+* See LICENSE.TXT at the top of this package for the full license terms.
+*/
+package eu.etaxonomy.taxeditor.navigation.navigator.operation;
+
+import java.util.UUID;
+
+import org.eclipse.core.runtime.IAdaptable;
+import org.eclipse.core.runtime.IProgressMonitor;
+
+import eu.etaxonomy.cdm.api.application.CdmApplicationState;
+import eu.etaxonomy.cdm.api.application.CdmChangeEvent.Action;
+import eu.etaxonomy.cdm.api.service.ITaxonNodeService;
+import eu.etaxonomy.cdm.api.service.UpdateResult;
+import eu.etaxonomy.taxeditor.operation.RemotingCdmUpdateOperation;
+
+
+/**
+ * @author cmathew
+ * @date 17 Jun 2015
+ *
+ */
+public class RemotingChangeAcceptedTaxonToSynonymOperation extends RemotingCdmUpdateOperation {
+
+ private final UUID oldTaxonNodeUuid;
+ private final UUID newAcceptedTaxonNodeUuid;
+
+
+ private final static String LABEL = "Change Accepted Taxon to Synonym operation";
+
+ /**
+ * @param label
+ */
+ public RemotingChangeAcceptedTaxonToSynonymOperation(Object source,
+ boolean async,
+ UUID oldTaxonNodeUuid,
+ UUID newAcceptedTaxonNodeUuid) {
+ super(LABEL, Action.Update, source, async);
+ this.oldTaxonNodeUuid = oldTaxonNodeUuid;
+ this.newAcceptedTaxonNodeUuid = newAcceptedTaxonNodeUuid;
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.operation.RemotingCdmUpdateOperation#doUpdateExecute(org.eclipse.core.runtime.IProgressMonitor, org.eclipse.core.runtime.IAdaptable)
+ */
+ @Override
+ protected UpdateResult doUpdateExecute(IProgressMonitor monitor, IAdaptable info) throws Exception {
+ return CdmApplicationState.getService(ITaxonNodeService.class).makeTaxonNodeASynonymOfAnotherTaxonNode(oldTaxonNodeUuid,
+ newAcceptedTaxonNodeUuid,
+ null,
+ null,
+ null);
+ }
+
+}
--- /dev/null
+// $Id$
+/**
+* Copyright (C) 2015 EDIT
+* European Distributed Institute of Taxonomy
+* http://www.e-taxonomy.eu
+*
+* The contents of this file are subject to the Mozilla Public License Version 1.1
+* See LICENSE.TXT at the top of this package for the full license terms.
+*/
+package eu.etaxonomy.taxeditor.navigation.navigator.operation;
+
+import java.util.HashSet;
+import java.util.Set;
+import java.util.UUID;
+
+import org.eclipse.core.runtime.IAdaptable;
+import org.eclipse.core.runtime.IProgressMonitor;
+
+import eu.etaxonomy.cdm.api.application.CdmApplicationState;
+import eu.etaxonomy.cdm.api.application.CdmChangeEvent.Action;
+import eu.etaxonomy.cdm.api.service.UpdateResult;
+import eu.etaxonomy.cdm.api.service.config.TaxonDeletionConfigurator;
+import eu.etaxonomy.cdm.model.taxon.Classification;
+import eu.etaxonomy.cdm.model.taxon.ITaxonTreeNode;
+import eu.etaxonomy.cdm.model.taxon.TaxonNode;
+import eu.etaxonomy.taxeditor.operation.RemotingCdmUpdateOperation;
+
+/**
+ * @author cmathew
+ * @date 22 Jun 2015
+ *
+ */
+public class RemotingDeleteTaxonNodeOperation extends RemotingCdmUpdateOperation {
+
+ private final static String LABEL = "Delete Taxon Node operation";
+
+ private final Set<ITaxonTreeNode> treeNodes;
+ private final TaxonDeletionConfigurator config;
+
+ /**
+ * @param label
+ * @param action
+ * @param source
+ * @param async
+ */
+ public RemotingDeleteTaxonNodeOperation(Object source,
+ boolean async,
+ Set<ITaxonTreeNode> treeNodes,
+ TaxonDeletionConfigurator config) {
+ super(LABEL, Action.Delete, source, async);
+ this.treeNodes = treeNodes;
+ this.config = config;
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.operation.RemotingCdmUpdateOperation#doUpdateExecute(org.eclipse.core.runtime.IProgressMonitor, org.eclipse.core.runtime.IAdaptable)
+ */
+ @Override
+ protected UpdateResult doUpdateExecute(IProgressMonitor monitor, IAdaptable info) throws Exception {
+
+
+ if(treeNodes.size() == 1) {
+ // when single node this is either a taxon or a classification
+ ITaxonTreeNode node = treeNodes.iterator().next();
+ if(node instanceof TaxonNode) {
+ return CdmApplicationState.getCurrentAppConfig().getTaxonNodeService().deleteTaxonNode(((TaxonNode)node).getUuid(), config);
+ } else if(node instanceof Classification) {
+ entityType = Classification.class;
+ return CdmApplicationState.getCurrentAppConfig().getClassificationService().delete(((Classification)node).getUuid());
+ }
+ } else {
+ // when list we assume all are taxon nodes
+ Set<UUID> treeNodeUuids = new HashSet<UUID>();
+ ITaxonTreeNode entity = null;
+ for(ITaxonTreeNode treeNode : treeNodes) {
+ if(entity == null) {
+ entity = treeNode;
+ }
+ treeNodeUuids.add(treeNode.getUuid());
+ }
+
+ return CdmApplicationState.getCurrentAppConfig().getTaxonNodeService().deleteTaxonNodes(treeNodeUuids, new TaxonDeletionConfigurator());
+ }
+ return null;
+ }
+
+}
--- /dev/null
+// $Id$
+/**
+* Copyright (C) 2015 EDIT
+* European Distributed Institute of Taxonomy
+* http://www.e-taxonomy.eu
+*
+* The contents of this file are subject to the Mozilla Public License Version 1.1
+* See LICENSE.TXT at the top of this package for the full license terms.
+*/
+package eu.etaxonomy.taxeditor.navigation.navigator.operation;
+
+import java.util.UUID;
+
+import org.eclipse.core.runtime.IAdaptable;
+import org.eclipse.core.runtime.IProgressMonitor;
+
+import eu.etaxonomy.cdm.api.application.CdmApplicationState;
+import eu.etaxonomy.cdm.api.application.CdmChangeEvent.Action;
+import eu.etaxonomy.cdm.api.service.IDescriptionService;
+import eu.etaxonomy.cdm.api.service.UpdateResult;
+import eu.etaxonomy.taxeditor.operation.RemotingCdmUpdateOperation;
+
+/**
+ * @author cmathew
+ * @date 19 Jun 2015
+ *
+ */
+public class RemotingMoveFactualDataOperation extends RemotingCdmUpdateOperation {
+
+ private final static String LABEL = "Move Factual Data operation";
+
+ private final UUID sourceTaxonUuid;
+ private final UUID targetParentTaxonUuid;
+
+ /**
+ * @param label
+ * @param action
+ * @param source
+ * @param async
+ */
+ public RemotingMoveFactualDataOperation(Object source,
+ boolean async,
+ UUID sourceTaxonUuid,
+ UUID targetParentTaxonUuid) {
+ super(LABEL, Action.Update, source, async);
+ this.sourceTaxonUuid = sourceTaxonUuid;
+ this.targetParentTaxonUuid = targetParentTaxonUuid;
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.operation.RemotingCdmUpdateOperation#doUpdateExecute(org.eclipse.core.runtime.IProgressMonitor, org.eclipse.core.runtime.IAdaptable)
+ */
+ @Override
+ protected UpdateResult doUpdateExecute(IProgressMonitor monitor, IAdaptable info) throws Exception {
+ return CdmApplicationState.getService(IDescriptionService.class).moveTaxonDescriptions(sourceTaxonUuid,
+ targetParentTaxonUuid);
+ }
+
+}
--- /dev/null
+// $Id$
+/**
+* Copyright (C) 2015 EDIT
+* European Distributed Institute of Taxonomy
+* http://www.e-taxonomy.eu
+*
+* The contents of this file are subject to the Mozilla Public License Version 1.1
+* See LICENSE.TXT at the top of this package for the full license terms.
+*/
+package eu.etaxonomy.taxeditor.navigation.navigator.operation;
+
+import java.util.HashSet;
+import java.util.Set;
+import java.util.UUID;
+
+import org.eclipse.core.runtime.IAdaptable;
+import org.eclipse.core.runtime.IProgressMonitor;
+
+import eu.etaxonomy.cdm.api.application.CdmApplicationState;
+import eu.etaxonomy.cdm.api.application.CdmChangeEvent.Action;
+import eu.etaxonomy.cdm.api.service.ITaxonNodeService;
+import eu.etaxonomy.cdm.api.service.UpdateResult;
+import eu.etaxonomy.cdm.model.taxon.TaxonNode;
+import eu.etaxonomy.taxeditor.operation.RemotingCdmUpdateOperation;
+
+/**
+ * @author cmathew
+ * @date 19 Jun 2015
+ *
+ */
+public class RemotingMoveTaxonOperation extends RemotingCdmUpdateOperation {
+
+ private final static String LABEL = "Move Taxon operation";
+
+ private Set<UUID> taxonNodesToMoveUuid;
+ private final UUID newParentTreeNodeUuid;
+ private final boolean moveToParentNode;
+
+ public RemotingMoveTaxonOperation(Object source,
+ boolean async,
+ UUID taxonNodeToMoveUuid,
+ UUID newParentTreeNodeUuid,
+ boolean moveToParentNode) {
+ super(LABEL, Action.Update, source,async);
+ taxonNodesToMoveUuid = new HashSet<UUID>();
+ taxonNodesToMoveUuid.add(taxonNodeToMoveUuid);
+ this.newParentTreeNodeUuid = newParentTreeNodeUuid;
+ this.moveToParentNode = moveToParentNode;
+ }
+
+ public RemotingMoveTaxonOperation(Object source,
+ boolean async,
+ TaxonNode taxonNodeToMove,
+ TaxonNode newParentTreeNode,
+ boolean moveToParentNode) {
+ super(LABEL, Action.Update, source,async);
+ taxonNodesToMoveUuid = new HashSet<UUID>();
+ taxonNodesToMoveUuid.add(taxonNodeToMove.getUuid());
+ this.newParentTreeNodeUuid = newParentTreeNode.getUuid();
+ this.moveToParentNode = moveToParentNode;
+ }
+
+ public RemotingMoveTaxonOperation(Object source,
+ boolean async,
+ Set<UUID> taxonNodesToMoveUuid,
+ TaxonNode newParentTreeNode,
+ boolean moveToParentNode) {
+ super(LABEL, Action.Update, source,async);
+ this.taxonNodesToMoveUuid = taxonNodesToMoveUuid;
+ this.newParentTreeNodeUuid = newParentTreeNode.getUuid();
+ this.moveToParentNode = moveToParentNode;
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.operation.RemotingCdmUpdateOperation#doUpdateExecute(org.eclipse.core.runtime.IProgressMonitor, org.eclipse.core.runtime.IAdaptable)
+ */
+ @Override
+ protected UpdateResult doUpdateExecute(IProgressMonitor monitor, IAdaptable info) throws Exception {
+ return CdmApplicationState.getService(ITaxonNodeService.class).moveTaxonNodes(taxonNodesToMoveUuid,
+ newParentTreeNodeUuid);
+ }
+
+}
// $Id$
/**
* Copyright (C) 2007 EDIT
-* European Distributed Institute of Taxonomy
+* European Distributed Institute of Taxonomy
* http://www.e-taxonomy.eu
-*
+*
* The contents of this file are subject to the Mozilla Public License Version 1.1
* See LICENSE.TXT at the top of this package for the full license terms.
*/
import eu.etaxonomy.cdm.model.taxon.Classification;
import eu.etaxonomy.taxeditor.operation.AbstractPersistentPostOperation;
import eu.etaxonomy.taxeditor.operation.IPostOperationEnabled;
+import eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled;
import eu.etaxonomy.taxeditor.store.CdmStore;
/**
@Deprecated // we do not undo creation of elements
public class CreateClassification extends AbstractPersistentPostOperation {
- private Classification classification;
-
+ private final Classification classification;
+
/**
* <p>Constructor for SaveClassificationOperation.</p>
*
*/
public CreateClassification(String label, IUndoContext undoContext, Classification classification,
IPostOperationEnabled postOperationEnabled,
- IConversationEnabled conversationEnabled) {
- super(label, undoContext, postOperationEnabled, conversationEnabled);
-
+ IConversationEnabled conversationEnabled,
+ ICdmEntitySessionEnabled cdmEntitiySessionEnabled) {
+ super(label, undoContext, postOperationEnabled, conversationEnabled, cdmEntitiySessionEnabled);
+
this.classification = classification;
-
+
}
-
+
/* (non-Javadoc)
* @see org.eclipse.core.commands.operations.AbstractOperation#execute(org.eclipse.core.runtime.IProgressMonitor, org.eclipse.core.runtime.IAdaptable)
*/
throws ExecutionException {
bind();
monitor.worked(20);
-
+
if(classification.getReference() == null){
Reference reference = ReferenceFactory.newGeneric();
reference.setTitleCache(classification.getTitleCache());
classification.setReference(reference);
}
-
+
CdmStore.getService(IClassificationService.class).saveOrUpdate(classification);
-
+
monitor.worked(40);
return postExecute(classification);
// $Id$
/**
* Copyright (C) 2007 EDIT
-* European Distributed Institute of Taxonomy
+* European Distributed Institute of Taxonomy
* http://www.e-taxonomy.eu
-*
+*
* The contents of this file are subject to the Mozilla Public License Version 1.1
* See LICENSE.TXT at the top of this package for the full license terms.
*/
import eu.etaxonomy.cdm.model.description.PolytomousKey;
import eu.etaxonomy.taxeditor.operation.AbstractPersistentPostOperation;
import eu.etaxonomy.taxeditor.operation.IPostOperationEnabled;
+import eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled;
import eu.etaxonomy.taxeditor.store.CdmStore;
/**
@Deprecated // we do not undo creation of elements
public class CreatePolytomousKey extends AbstractPersistentPostOperation {
- private PolytomousKey key;
+ private final PolytomousKey key;
/**
* @param label
IUndoContext undoContext,
PolytomousKey key,
IPostOperationEnabled postOperationEnabled,
- IConversationEnabled conversationEnabled) {
- super(label, undoContext, postOperationEnabled, conversationEnabled);
+ IConversationEnabled conversationEnabled,
+ ICdmEntitySessionEnabled cdmEntitySessionEnabled) {
+ super(label, undoContext, postOperationEnabled, conversationEnabled, cdmEntitySessionEnabled);
this.key = key;
}
monitor.worked(20);
CdmStore.getService(IPolytomousKeyService.class).saveOrUpdate(key);
monitor.worked(40);
-
+
return postExecute(key);
}
import eu.etaxonomy.taxeditor.model.MessagingUtils;
import eu.etaxonomy.taxeditor.operation.AbstractPersistentPostOperation;
import eu.etaxonomy.taxeditor.operation.IPostOperationEnabled;
+import eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled;
import eu.etaxonomy.taxeditor.store.CdmStore;
/**
@Deprecated // we do not undo creation of elements
public class CreateTaxonNode extends AbstractPersistentPostOperation {
- private Taxon newTaxon;
+ private final Taxon newTaxon;
private TaxonNode childTaxonNode;
* @param parentNode a {@link eu.etaxonomy.cdm.model.taxon.ITaxonTreeNode} object.
* @param conversationEnabled a {@link eu.etaxonomy.cdm.api.conversation.IConversationEnabled} object.
*/
- public CreateTaxonNode(String label, IUndoContext undoContext,
- ITaxonTreeNode parentNode, TaxonNameBase<?, ?> name, IPostOperationEnabled postOperationEnabled,
- IConversationEnabled conversationEnabled) {
- super(label, undoContext, parentNode, postOperationEnabled, conversationEnabled);
+ public CreateTaxonNode(String label,
+ IUndoContext undoContext,
+ ITaxonTreeNode parentNode, TaxonNameBase<?, ?> name,
+ IPostOperationEnabled postOperationEnabled,
+ IConversationEnabled conversationEnabled,
+ ICdmEntitySessionEnabled cdmEntitySessionEnabled) {
+ super(label, undoContext, parentNode, postOperationEnabled, conversationEnabled, cdmEntitySessionEnabled);
newTaxon = Taxon.NewInstance(name, null);
}
* @param parentNode a {@link eu.etaxonomy.cdm.model.taxon.ITaxonTreeNode} object.
* @param conversationEnabled a {@link eu.etaxonomy.cdm.api.conversation.IConversationEnabled} object.
*/
- public CreateTaxonNode(String label, IUndoContext undoContext,
- ITaxonTreeNode parentNode, Taxon taxon, IPostOperationEnabled postOperationEnabled,
- IConversationEnabled conversationEnabled) {
- super(label, undoContext, parentNode, postOperationEnabled, conversationEnabled);
+ public CreateTaxonNode(String label,
+ IUndoContext undoContext,
+ ITaxonTreeNode parentNode,
+ Taxon taxon,
+ IPostOperationEnabled postOperationEnabled,
+ IConversationEnabled conversationEnabled,
+ ICdmEntitySessionEnabled cdmEntitySessionEnabled) {
+ super(label, undoContext, parentNode, postOperationEnabled, conversationEnabled, cdmEntitySessionEnabled);
this.newTaxon = taxon;
}
package eu.etaxonomy.taxeditor.navigation.search;
+import org.eclipse.core.runtime.IProgressMonitor;
import org.eclipse.swt.SWT;
import org.eclipse.swt.events.FocusEvent;
import org.eclipse.swt.events.FocusListener;
import org.eclipse.swt.widgets.Text;
import org.eclipse.swt.widgets.ToolBar;
import org.eclipse.swt.widgets.ToolItem;
+import org.eclipse.ui.IMemento;
import org.eclipse.ui.IViewPart;
import org.eclipse.ui.IWorkbenchPage;
import org.eclipse.ui.PartInitException;
import org.eclipse.ui.swt.IFocusService;
import eu.etaxonomy.cdm.api.service.config.IFindTaxaAndNamesConfigurator;
+import eu.etaxonomy.taxeditor.model.AbstractUtility;
+import eu.etaxonomy.taxeditor.model.IContextListener;
import eu.etaxonomy.taxeditor.model.MessagingUtils;
-import eu.etaxonomy.taxeditor.navigation.NavigationUtil;
import eu.etaxonomy.taxeditor.navigation.internal.TaxeditorNavigationPlugin;
import eu.etaxonomy.taxeditor.preference.IPreferenceKeys;
import eu.etaxonomy.taxeditor.preference.PreferencesUtil;
import eu.etaxonomy.taxeditor.preference.Resources;
+import eu.etaxonomy.taxeditor.store.CdmStore;
/**
- * <p>SearchBar class.</p>
- *
* @author n.hoffmann
* @author e.-m.lee
* @created 15.04.2009
* @version 1.0
*/
-public class SearchBar extends WorkbenchWindowControlContribution{
+public class SearchBar extends WorkbenchWindowControlContribution implements IContextListener{
private Text text_search;
private String secondaryId;
+ private ToolBar toolBar;
private final String defaultText = Messages.SearchBar_0;
createSearchTextField(composite);
createToolBar(composite);
registerAtFocusService();
+ //register for context refreshes
+ CdmStore.getContextManager().addContextListener(this);
return composite;
}
* @param composite
*/
private void createToolBar(Composite composite) {
- final ToolBar toolBar = new ToolBar(composite, SWT.NULL);
+ toolBar = new ToolBar(composite, SWT.NULL);
ToolItem toolItem = new ToolItem(toolBar, SWT.DROP_DOWN | SWT.BORDER);
toolItem.setText(Messages.SearchBar_1);
+ toolBar.setEnabled(false);
DropdownSelectionListener dropdownListener = new DropdownSelectionListener(
toolItem);
// is applied. I am not sure how to get rid of this.
text_search = new Text(composite, SWT.BORDER | SWT.SINGLE
| SWT.FULL_SELECTION);
- text_search.setForeground(NavigationUtil.getColor(Resources.SEARCH_VIEW_FOREGROUND));
+ text_search.setForeground(AbstractUtility.getColor(Resources.SEARCH_VIEW_FOREGROUND));
text_search.setText(defaultText);
+ text_search.setEnabled(false);
addTextListeners();
}
@Override
public void focusGained(FocusEvent e) {
- text_search.setForeground(NavigationUtil.getColor(Resources.SEARCH_VIEW_FOCUS));
+ text_search.setForeground(AbstractUtility.getColor(Resources.SEARCH_VIEW_FOCUS));
if (defaultText.equals(text_search.getText())) {
text_search.setText("");
}
@Override
public void focusLost(FocusEvent e) {
if (text_search.getText() == "") {
- text_search.setForeground(NavigationUtil.getColor(Resources.SEARCH_VIEW_FOREGROUND));
+ text_search.setForeground(AbstractUtility.getColor(Resources.SEARCH_VIEW_FOREGROUND));
text_search.setText(defaultText);
}
}
});
text_search.addKeyListener(new KeyAdapter() {
- /*
- * (non-Javadoc)
- * @see org.eclipse.swt.events.KeyAdapter#keyPressed(org.eclipse.swt.events.KeyEvent)
- */
@Override
public void keyPressed(KeyEvent e) {
if (e.keyCode == SWT.CR) {
return;
}
- if("*".equals(searchString.trim())){
+ if(!searchString.trim().matches(".*\\p{L}+.*")){
MessagingUtils.warningDialog(Messages.SearchBar_2, this, Messages.SearchBar_3);
return;
}
private IFindTaxaAndNamesConfigurator configurator = PreferencesUtil.getSearchConfigurator();
- /*
- * (non-Javadoc)
- *
- * @see
- * org.eclipse.swt.events.SelectionListener#widgetSelected(org.eclipse
- * .swt.events.SelectionEvent)
- */
@Override
public void widgetSelected(SelectionEvent e) {
SearchOption option = (SearchOption) e.widget.getData();
public boolean getPreference() {
if (!PreferencesUtil.getPreferenceStore().contains(
- PreferencesUtil.TAXON_SERVICE_CONFIGURATOR_TAXA)) {
+ IPreferenceKeys.TAXON_SERVICE_CONFIGURATOR_TAXA)) {
// initializes the search configurator
PreferencesUtil.initializeSearchConfigurator();
}
switch (this) {
case TAXON:
boolean result = PreferencesUtil.getPreferenceStore().getBoolean(
- PreferencesUtil.TAXON_SERVICE_CONFIGURATOR_TAXA);
+ IPreferenceKeys.TAXON_SERVICE_CONFIGURATOR_TAXA);
return result;
case SYNONYM:
return PreferencesUtil.getPreferenceStore().getBoolean(
- PreferencesUtil.TAXON_SERVICE_CONFIGURATOR_SYNONYMS);
+ IPreferenceKeys.TAXON_SERVICE_CONFIGURATOR_SYNONYMS);
case NAME:
return PreferencesUtil.getPreferenceStore().getBoolean(
- PreferencesUtil.TAXON_SERVICE_CONFIGURATOR_NAMES);
+ IPreferenceKeys.TAXON_SERVICE_CONFIGURATOR_NAMES);
case COMMON_NAME:
return PreferencesUtil.getPreferenceStore().getBoolean(
- PreferencesUtil.TAXON_SERVICE_CONFIGURATOR_COMMON_NAMES);
+ IPreferenceKeys.TAXON_SERVICE_CONFIGURATOR_COMMON_NAMES);
}
return true;
}
}
+
+ @Override
+ public void contextAboutToStop(IMemento memento, IProgressMonitor monitor) {
+ }
+
+ @Override
+ public void contextStop(IMemento memento, IProgressMonitor monitor) {
+ if(!text_search.isDisposed()){
+ text_search.setEnabled(false);
+ }
+ if(!toolBar.isDisposed()){
+ toolBar.setEnabled(false);
+ }
+ }
+
+ @Override
+ public void contextStart(IMemento memento, IProgressMonitor monitor) {
+ text_search.setEnabled(true);
+ toolBar.setEnabled(true);
+ }
+
+ @Override
+ public void contextRefresh(IProgressMonitor monitor) {
+ }
+
+ @Override
+ public void workbenchShutdown(IMemento memento, IProgressMonitor monitor) {
+ }
}
+++ /dev/null
-### ************ APPENDER ***********************************###
-
-### direct log messages to stdout ###
-log4j.appender.stdout=org.apache.log4j.ConsoleAppender
-log4j.appender.stdout.Target=System.out
-log4j.appender.stdout.layout=org.apache.log4j.PatternLayout
-log4j.appender.stdout.layout.ConversionPattern=%d{ABSOLUTE} %5p %c{1}:%L - %m%n
-
-### direct messages to file hibernate.log ###
-log4j.appender.file=org.apache.log4j.FileAppender
-log4j.appender.file.File=taxeditor.log
-log4j.appender.file.layout=org.apache.log4j.PatternLayout
-log4j.appender.file.layout.ConversionPattern=%d{ABSOLUTE} %5p %c{1}:%L - %m%n
-
-### ************* LOG LEVELS *********************************###
-
-### set log levels - for more verbose logging change 'info' to 'debug' ###
-### levels: error, warn, debug, info
-log4j.rootLogger=WARN, stdout
-
-### set directory-specific levels below
-
-### basic level for editor directory
-log4j.logger.eu.etaxonomy.taxeditor.editor = INFO, stdout
-
-log4j.logger.eu.etaxonomy.taxeditor.editor.handler = INFO, stdout
-
-### log level for conversation handler
-#log4j.logger.eu.etaxonomy.cdm.api.application = DEBUG, stdout
Bundle-ManifestVersion: 2
Bundle-Name: Printpublisher Bundle
Bundle-SymbolicName: eu.etaxonomy.taxeditor.printpublisher;singleton:=true
-Bundle-Version: 3.8.1
+Bundle-Version: 3.12.0.qualifier
Require-Bundle: org.eclipse.osgi,
org.eclipse.ui,
eu.etaxonomy.taxeditor.cdmlib,
<parent>
<artifactId>taxeditor-parent</artifactId>
<groupId>eu.etaxonomy</groupId>
- <version>3.8.1</version>
+ <version>3.12.0-SNAPSHOT</version>
</parent>
<modelVersion>4.0.0</modelVersion>
Bundle-ManifestVersion: 2
Bundle-Name: DataStore Bundle
Bundle-SymbolicName: eu.etaxonomy.taxeditor.store;singleton:=true
-Bundle-Version: 3.8.1
+Bundle-Version: 3.12.0.qualifier
Bundle-Activator: eu.etaxonomy.taxeditor.store.internal.TaxeditorStorePlugin
Bundle-Vendor: EDIT
Export-Package: eu.etaxonomy.cdm,
eu.etaxonomy.taxeditor.ui.section.supplemental,
eu.etaxonomy.taxeditor.ui.section.taxon,
eu.etaxonomy.taxeditor.ui.selection,
+ eu.etaxonomy.taxeditor.util,
eu.etaxonomy.taxeditor.view,
eu.etaxonomy.taxeditor.view.datasource,
eu.etaxonomy.taxeditor.view.datasource.handler,
org.eclipse.ui.editors.text,
org.eclipse.ui.forms.widgets,
org.eclipse.ui.ide.undo,
- org.osgi.framework
+ org.osgi.framework,
+ org.osgi.service.prefs;version="1.1.1"
Bundle-ActivationPolicy: lazy
Bundle-RequiredExecutionEnvironment: JavaSE-1.6
Bundle-ClassPath: .,
LanguageEditorPreferencePage_RestartRequired=After changing the default language, a restart is required,\nin order for the new settings to take effect.\r
OrderPreferencePage_NewNavigatorWindowRequired=After changing the order of the taxon nodes, closing and reopen of the taxon navigator is required.\r
OrderPreferencePage_PleaseReopenNavigator=Please close and reopen the taxon navigator.\r
-UriWithLabelElement_URL_NOT_SAVED=URL won't be saved\! \r
+UriWithLabelElement_URL_NOT_SAVED=URI won't be saved\! \r
UriWithLabelElement_COULD_NOT_OPEN_BROWSER=Could not open external browser. URI is invalid.\r
UriWithLabelElement_INVALID_URL=Invalid URI\r
UriWithLabelElement_OPEN_EXTERNAL_BROWSER=Open in external browser\r
+\r
+ChangeConnectionHandler_ALREADY_CONNECTING=Already connecting\r
+ChangeConnectionHandler_CONFIRM_DATASOURCE=Confirm Datasource Connection\r
+ChangeConnectionHandler_CURRENTLY_CONNECTING_ALREADY=You are currently connecting to a different datasource already.\r
+ChangeConnectionHandler_DATASOURCE_NOT_AVAILABLE=Chosen datasource is not available\r
+ChangeConnectionHandler_REALLY_WANT_TO_CONNECT=Do you really want to connect to this datasource?\n\n\r
+ChangeConnectionHandler_NOT_AVAILABLE_REASONS=This could mean that either the database server is not running or the machine is not reachable.\n\n Please also make sure that you are connected to the network when trying to connect to a remote datasource.\r
+\r
+LoginDialog_CANCEL_MESSAGE=Aborting the login procedure will close the database.\r
+LoginDialog_LOGIN=Login\r
+LoginDialog_PASSWORD=Password\r
+LoginDialog_REALLY_CANCEL=Do you really want to cancel?\r
+LoginDialog_USER_LOGIN=User Login\r
+LoginDialog_USER_NAME=Username\r
LanguageEditorPreferencePage_PleaseRestart=Bitte neu starten
LanguageEditorPreferencePage_RestartRequired=Nach dem Wechsel der Standardsprache ist ein Neustart erforderlich.
OrderPreferencePage_NewNavigatorWindowRequired=Nach dem Ändern der Taxon Sortierung, ist das Schließen und erneute Öffnen des taxon Navigators erforderlich.
-UriWithLabelElement_URL_NOT_SAVED=URL wird nicht gespeichert\!
+UriWithLabelElement_URL_NOT_SAVED=URI wird nicht gespeichert\!
UriWithLabelElement_COULD_NOT_OPEN_BROWSER=Externer Browser konnte nicht geöffnet werden. URI ist ung\u00FCtlig.
UriWithLabelElement_INVALID_URL=Ung\u00FCltige URI
-UriWithLabelElement_OPEN_EXTERNAL_BROWSER=Im Browser öffnen
\ No newline at end of file
+UriWithLabelElement_OPEN_EXTERNAL_BROWSER=Im Browser öffnen
+
+ChangeConnectionHandler_ALREADY_CONNECTING=Verbindung wird aufgebaut
+ChangeConnectionHandler_CONFIRM_DATASOURCE=Verbindung bestätigen
+ChangeConnectionHandler_CURRENTLY_CONNECTING_ALREADY=Es wird schon eine Verbindung zu einer Datenquelle aufgebaut
+ChangeConnectionHandler_DATASOURCE_NOT_AVAILABLE=Gewählte Datenquelle nicht verfügbar
+ChangeConnectionHandler_REALLY_WANT_TO_CONNECT=Wollen Sie sich wirklich mit dieser Datenquelle verbinden?\n\n
+ChangeConnectionHandler_NOT_AVAILABLE_REASONS=Eventuell ist der Server nicht verfügbar oder erreichbar.\n\nStellen Sie bitte auch sicher, dass sie Netzzugang haben, wenn sie sich zu einer Remote-Datenquelle verbinden.
+
+LoginDialog_CANCEL_MESSAGE=Ein Abbruch wird die Verbindung zur Datenquelle schließen.
+LoginDialog_LOGIN=Login
+LoginDialog_PASSWORD=Passwort
+LoginDialog_REALLY_CANCEL=Wollen Sie wirklich abbrechen?
+LoginDialog_USER_LOGIN=Benutzer Login
+LoginDialog_USER_NAME=Benutzername
id="eu.etaxonomy.taxeditor.view.derivateSearch.DerivateSearchView"
name="%view.name.6"
restorable="true">
+ </view>
+ <view
+ allowMultiple="false"
+ class="eu.etaxonomy.taxeditor.view.sessions.SessionsViewPart"
+ id="eu.etaxonomy.taxeditor.view.sessions.SessionsViewPart"
+ name="Sessions"
+ restorable="false">
</view>
</extension>
<extension
name="org.eclipse.ui.views.showView.viewId"
value="eu.etaxonomy.taxeditor.view.derivateSearch.DerivateSearchView">
</parameter>
+ <visibleWhen
+ checkEnabled="true">
+ <reference
+ definitionId="isCdmStoreConnected">
+ </reference>
+ </visibleWhen>
</command>
<separator
name="eu.etaxonomy.taxeditor.store.showViewMenu.details"
name="org.eclipse.ui.views.showView.viewId"
value="eu.etaxonomy.taxeditor.view.detail">
</parameter>
+ <visibleWhen
+ checkEnabled="true">
+ <reference
+ definitionId="isCdmStoreConnected">
+ </reference>
+ </visibleWhen>
</command>
<command
commandId="org.eclipse.ui.views.showView"
name="org.eclipse.ui.views.showView.viewId"
value="eu.etaxonomy.taxeditor.view.supplementalData">
</parameter>
+ <visibleWhen
+ checkEnabled="true">
+ <reference
+ definitionId="isCdmStoreConnected">
+ </reference>
+ </visibleWhen>
</command>
<!-- Originally used by validation framework, currently not in use -->
<!-- <command
name="org.eclipse.ui.views.showView.viewId"
value="eu.etaxonomy.taxeditor.reporting.viewPart">
</parameter>
+ <visibleWhen
+ checkEnabled="true">
+ <and>
+ <reference
+ definitionId="isShowExperimentalFeatures">
+ </reference>
+ <reference
+ definitionId="isCdmStoreConnected">
+ </reference>
+ </and>
+ </visibleWhen>
+ </command>
+ <command
+ commandId="org.eclipse.ui.views.showView"
+ label="Sessions"
+ style="push">
+ <parameter
+ name="org.eclipse.ui.views.showView.viewId"
+ value="eu.etaxonomy.taxeditor.view.sessions.SessionsViewPart">
+ </parameter>
<visibleWhen
checkEnabled="true">
<reference
- definitionId="isShowExperimentalFeatures">
+ definitionId="isCdmStoreConnected">
</reference>
</visibleWhen>
</command>
</menuContribution>
<menuContribution
locationURI="menu:org.eclipse.ui.main.menu.file?after=eu.etaxonomy.taxeditor.application.filemenu.io">
+ <command
+ commandId="eu.etaxonomy.taxeditor.store.operations.showRemotingLoginWindow"
+ label="Connect"
+ style="push">
+ </command>
<command
commandId="eu.etaxonomy.taxeditor.store.operations.showLoginWindow"
label="%command.label.5"
style="push">
+ <visibleWhen
+ checkEnabled="true">
+ <reference
+ definitionId="isUserLoggedIn">
+ </reference>
+ </visibleWhen>
+ </command>
+ <command
+ commandId="eu.etaxonomy.taxeditor.store.operations.reconnect"
+ label="Re-Connect"
+ style="push">
+ <visibleWhen
+ checkEnabled="true">
+ <reference
+ definitionId="isUserLoggedIn">
+ </reference>
+ </visibleWhen>
</command>
<separator
name="eu.etaxonomy.taxeditor.application.filemenu.login"
</activeWhen>
</handler>
<handler
- class="eu.etaxonomy.taxeditor.handler.ShowLoginWindowHandler"
- commandId="eu.etaxonomy.taxeditor.store.operations.showLoginWindow">
- <enabledWhen>
- <reference
- definitionId="isUserLoggedIn">
- </reference></enabledWhen>
+ class="eu.etaxonomy.taxeditor.handler.ShowRemotingLoginWindowHandler"
+ commandId="eu.etaxonomy.taxeditor.store.operations.showRemotingLoginWindow">
</handler>
<handler
class="eu.etaxonomy.taxeditor.handler.OpenPasswordWizzardHandler"
</reference>
</activeWhen>
</handler>
+ <handler
+ class="eu.etaxonomy.taxeditor.handler.SwitchUserHandler"
+ commandId="eu.etaxonomy.taxeditor.store.operations.showLoginWindow">
+ <activeWhen>
+ <reference
+ definitionId="isRemoting">
+ </reference>
+ </activeWhen>
+ </handler>
</extension>
<extension
name="%extension.name.0"
name="%command.name.3">
</command>
<command
+ defaultHandler="eu.etaxonomy.taxeditor.handler.ShowLoginWindowHandler"
id="eu.etaxonomy.taxeditor.store.operations.showLoginWindow"
name="%command.name.4">
</command>
+ <command
+ id="eu.etaxonomy.taxeditor.store.operations.showRemotingLoginWindow"
+ name="Connect">
+ </command>
+ <command
+ defaultHandler="eu.etaxonomy.taxeditor.handler.ReconnectHandler"
+ id="eu.etaxonomy.taxeditor.store.operations.reconnect"
+ name="Re-Connect">
+ </command>
<command
defaultHandler="eu.etaxonomy.taxeditor.editor.definedterm.handler.OpenDefinedTermEditorHandler"
id="eu.etaxonomy.taxeditor.store.openDefinedTermEditor"
id="eu.etaxonomy.taxeditor.editor.definedTerms.delete"
name="%command.name.14">
</command>
+ <command
+ defaultHandler="eu.etaxonomy.taxeditor.handler.OpenInspectSessionsHandler"
+ id="eu.etaxonomy.taxeditor.store.open.InspectSessionsDialog"
+ name="Inspect Active Session">
+ </command>
<command
defaultHandler="eu.etaxonomy.taxeditor.handler.OpenHandler"
id="eu.etaxonomy.taxeditor.store.open"
<parent>
<groupId>eu.etaxonomy</groupId>
<artifactId>taxeditor-parent</artifactId>
- <version>3.8.1</version>
+ <version>3.12.0-SNAPSHOT</version>
</parent>
<modelVersion>4.0.0</modelVersion>
public static String LanguageEditorPreferencePage_EditorHasToRestart;
public static String LanguageEditorPreferencePage_PleaseRestart;
public static String LanguageEditorPreferencePage_RestartRequired;
+ public static String LoginDialog_CANCEL_MESSAGE;
+ public static String LoginDialog_LOGIN;
+ public static String LoginDialog_PASSWORD;
+ public static String LoginDialog_REALLY_CANCEL;
+ public static String LoginDialog_USER_LOGIN;
+ public static String LoginDialog_USER_NAME;
public static String OrderPreferencePage_NewNavigatorWindowRequired;
public static String OrderPreferencePage_PleaseReopenNavigator;
public static String CdmDataSourceViewPart_1;
public static String CdmDataSourceViewPart_7;
public static String CdmDataSourceViewPart_8;
public static String CdmDataSourceViewPart_9;
+ public static String ChangeConnectionHandler_ALREADY_CONNECTING;
+ public static String ChangeConnectionHandler_CONFIRM_DATASOURCE;
+ public static String ChangeConnectionHandler_CURRENTLY_CONNECTING_ALREADY;
+ public static String ChangeConnectionHandler_DATASOURCE_NOT_AVAILABLE;
+ public static String ChangeConnectionHandler_REALLY_WANT_TO_CONNECT;
+ public static String ChangeConnectionHandler_NOT_AVAILABLE_REASONS;
public static String UriWithLabelElement_COULD_NOT_OPEN_BROWSER;
public static String UriWithLabelElement_INVALID_URL;
public static String UriWithLabelElement_OPEN_EXTERNAL_BROWSER;
import eu.etaxonomy.cdm.database.DataSourceNotFoundException;
import eu.etaxonomy.cdm.database.ICdmDataSource;
import eu.etaxonomy.cdm.model.name.NomenclaturalCode;
-import eu.etaxonomy.cdm.remote.CdmPersistentRemoteSource;
-import eu.etaxonomy.cdm.remote.CdmRemoteSourceException;
-import eu.etaxonomy.cdm.remote.ICdmRemoteSource;
+
import eu.etaxonomy.taxeditor.model.MementoHelper;
import eu.etaxonomy.taxeditor.model.MessagingUtils;
import eu.etaxonomy.taxeditor.preference.PreferencesUtil;
+import eu.etaxonomy.taxeditor.remoting.source.CdmPersistentRemoteSource;
+import eu.etaxonomy.taxeditor.remoting.source.CdmRemoteSourceException;
+import eu.etaxonomy.taxeditor.remoting.source.ICdmRemoteSource;
import eu.etaxonomy.taxeditor.store.CdmStore;
import eu.etaxonomy.taxeditor.store.internal.TaxeditorStorePlugin;
public class CdmDataSourceRepository{
--- /dev/null
+// $Id$
+/**
+* Copyright (C) 2015 EDIT
+* European Distributed Institute of Taxonomy
+* http://www.e-taxonomy.eu
+*
+* The contents of this file are subject to the Mozilla Public License Version 1.1
+* See LICENSE.TXT at the top of this package for the full license terms.
+*/
+package eu.etaxonomy.taxeditor.editor;
+
+import java.util.List;
+import java.util.Map;
+
+import eu.etaxonomy.taxeditor.session.ICdmEntitySession;
+import eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled;
+import eu.etaxonomy.taxeditor.store.CdmStore;
+
+/**
+ * @author cmathew
+ * @date 5 Feb 2015
+ *
+ */
+public abstract class CdmEntitySessionInput implements ICdmEntitySessionEnabled {
+
+ private ICdmEntitySession cdmEntitySession;
+
+ public CdmEntitySessionInput(boolean init) {
+ if(init) {
+ initSession();
+ }
+ }
+
+ protected void initSession() {
+ cdmEntitySession = CdmStore.getCurrentSessionManager().newSession(this, true);
+ }
+
+ @Override
+ public ICdmEntitySession getCdmEntitySession() {
+ return cdmEntitySession;
+ }
+
+ public void bind() {
+ cdmEntitySession.bind();
+ }
+
+ public void dispose() {
+ cdmEntitySession.dispose();
+ }
+
+ public abstract void merge();
+
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled#getPropertyPathsMap()
+ */
+ @Override
+ public Map<Object, List<String>> getPropertyPathsMap() {
+ // TODO Auto-generated method stub
+ return null;
+ }
+
+}
*/\r
package eu.etaxonomy.taxeditor.editor.definedterm;\r
\r
+import java.util.ArrayList;\r
+import java.util.List;\r
+import java.util.Map;\r
+import java.util.Set;\r
+\r
import org.eclipse.core.runtime.IProgressMonitor;\r
import org.eclipse.jface.action.GroupMarker;\r
import org.eclipse.jface.action.MenuManager;\r
\r
import eu.etaxonomy.cdm.api.conversation.ConversationHolder;\r
import eu.etaxonomy.cdm.api.conversation.IConversationEnabled;\r
+import eu.etaxonomy.cdm.api.service.IVocabularyService;\r
import eu.etaxonomy.cdm.model.common.CdmBase;\r
+import eu.etaxonomy.cdm.model.common.DefinedTermBase;\r
import eu.etaxonomy.cdm.model.common.OrderedTermBase;\r
+import eu.etaxonomy.cdm.model.common.TermVocabulary;\r
import eu.etaxonomy.cdm.persistence.hibernate.CdmDataChangeMap;\r
import eu.etaxonomy.taxeditor.editor.definedterm.input.TermEditorInput;\r
import eu.etaxonomy.taxeditor.model.IDirtyMarkable;\r
import eu.etaxonomy.taxeditor.operation.IPostOperationEnabled;\r
+import eu.etaxonomy.taxeditor.session.ICdmEntitySession;\r
+import eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled;\r
import eu.etaxonomy.taxeditor.store.CdmStore;\r
import eu.etaxonomy.taxeditor.ui.element.LayoutConstants;\r
\r
* @date 3 Jan 2012\r
*\r
*/\r
-public class DefinedTermEditor extends EditorPart implements IConversationEnabled, ISelectionListener, IDirtyMarkable, IPostOperationEnabled {\r
+public class DefinedTermEditor extends EditorPart implements IConversationEnabled, ISelectionListener, IDirtyMarkable, IPostOperationEnabled, ICdmEntitySessionEnabled {\r
\r
public static final String ID = "eu.etaxonomy.taxeditor.editor.definedTerm";\r
\r
private ISelectionService selectionService;\r
private boolean dirty;\r
\r
+ private final ICdmEntitySession cdmEntitySession;\r
\r
\r
private final int dndOperations = DND.DROP_COPY | DND.DROP_MOVE;\r
public DefinedTermEditor() {\r
super();\r
conversation = CdmStore.createConversation();\r
+ cdmEntitySession = CdmStore.getCurrentSessionManager().newSession(this, true);\r
}\r
\r
@Override\r
@Override\r
public void doSave(IProgressMonitor monitor) {\r
getConversationHolder().commit();\r
+ if(CdmStore.getCurrentSessionManager().isRemoting()) {\r
+ CdmStore.getService(IVocabularyService.class).merge(new ArrayList<TermVocabulary>(getRootEntities()), true);\r
+ }\r
setDirty(false);\r
getDefinedTermEditorInput().initialiseVocabularies();\r
+ viewer.refresh();\r
}\r
\r
\r
public void setFocus() {\r
viewer.getControl().setFocus();\r
getConversationHolder().bind();\r
+ cdmEntitySession.bind();\r
}\r
\r
@Override\r
}\r
}\r
\r
+ @Override\r
+ public void dispose() {\r
+ cdmEntitySession.dispose();\r
+ super.dispose();\r
+ }\r
+\r
+ /* (non-Javadoc)\r
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled#getCdmEntitySession()\r
+ */\r
+ @Override\r
+ public ICdmEntitySession getCdmEntitySession() {\r
+ return cdmEntitySession;\r
+ }\r
+\r
+ /* (non-Javadoc)\r
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled#getRootEntities()\r
+ */\r
+ @Override\r
+ public Set<TermVocabulary<DefinedTermBase>> getRootEntities() {\r
+ return getDefinedTermEditorInput().getVocabularies();\r
+ }\r
+\r
+ /* (non-Javadoc)\r
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled#getPropertyPathsMap()\r
+ */\r
+ @Override\r
+ public Map<Object, List<String>> getPropertyPathsMap() {\r
+ // TODO Auto-generated method stub\r
+ return null;\r
+ }\r
+\r
\r
}
\ No newline at end of file
// $Id$\r
/**\r
* Copyright (C) 2009 EDIT\r
-* European Distributed Institute of Taxonomy \r
+* European Distributed Institute of Taxonomy\r
* http://www.e-taxonomy.eu\r
-* \r
+*\r
* The contents of this file are subject to the Mozilla Public License Version 1.1\r
* See LICENSE.TXT at the top of this package for the full license terms.\r
*/\r
import eu.etaxonomy.taxeditor.model.MessagingUtils;\r
import eu.etaxonomy.taxeditor.operation.AbstractPostTaxonOperation;\r
import eu.etaxonomy.taxeditor.operation.IPostOperationEnabled;\r
+import eu.etaxonomy.taxeditor.store.CdmStore;\r
import eu.etaxonomy.taxeditor.store.StoreUtil;\r
\r
/**\r
*/\r
public class CreateDefinedTermOperation extends AbstractPostTaxonOperation {\r
\r
- \r
\r
- private TermBase parentTermBase;\r
- private TermEditorInput definedTermInput;\r
+\r
+ private final TermBase parentTermBase;\r
+ private final TermEditorInput definedTermInput;\r
\r
/**\r
* @param label\r
* @param postOperationEnabled\r
*/\r
public CreateDefinedTermOperation(String label,\r
- IUndoContext undoContext, \r
+ IUndoContext undoContext,\r
TermBase termBase,\r
TermEditorInput definedTermInput,\r
IPostOperationEnabled postOperationEnabled) {\r
@Override\r
public IStatus execute(IProgressMonitor monitor, IAdaptable info)\r
throws ExecutionException {\r
- \r
+\r
DefinedTermBase newTerm = definedTermInput.getTermType().getEmptyDefinedTermBase();\r
if (newTerm == null) {\r
- IStatus status = \r
- new Status(IStatus.CANCEL, \r
- StoreUtil.getPluginId(), \r
+ IStatus status =\r
+ new Status(IStatus.CANCEL,\r
+ StoreUtil.getPluginId(),\r
"Creation of term corresponding to type '" + definedTermInput.getTermType().getMessage() + "' is not yet supported");\r
MessagingUtils.warningDialog("Cannot create term", newTerm, status);\r
return status;\r
}\r
- \r
+ newTerm = CdmStore.getCurrentApplicationConfiguration().getTermService().save(newTerm);\r
+\r
if (parentTermBase instanceof TermVocabulary){\r
TermVocabulary vocabulary = (TermVocabulary) parentTermBase;\r
vocabulary.addTerm(newTerm);\r
} else if (parentTermBase instanceof DefinedTermBase) {\r
- DefinedTermBase parent = (DefinedTermBase) parentTermBase; \r
- parent.addIncludes(newTerm); \r
+ DefinedTermBase parent = (DefinedTermBase) parentTermBase;\r
+ parent.addIncludes(newTerm);\r
TermVocabulary vocabulary = parent.getVocabulary();\r
vocabulary.addTerm(newTerm);\r
}\r
- \r
+\r
return postExecute(newTerm);\r
}\r
\r
// $Id$\r
/**\r
* Copyright (C) 2009 EDIT\r
-* European Distributed Institute of Taxonomy \r
+* European Distributed Institute of Taxonomy\r
* http://www.e-taxonomy.eu\r
-* \r
+*\r
* The contents of this file are subject to the Mozilla Public License Version 1.1\r
* See LICENSE.TXT at the top of this package for the full license terms.\r
*/\r
*/\r
public class CreateTermVocabularyOperation extends AbstractPostTaxonOperation {\r
\r
- private TermEditorInput definedEditorInput;\r
- \r
+ private final TermEditorInput definedEditorInput;\r
+\r
/**\r
* @param label\r
* @param undoContext\r
* @param postOperationEnabled\r
*/\r
public CreateTermVocabularyOperation(String label,\r
- IUndoContext undoContext, \r
- TermEditorInput definedEditorInput, \r
+ IUndoContext undoContext,\r
+ TermEditorInput definedEditorInput,\r
IPostOperationEnabled postOperationEnabled) {\r
super(label, undoContext, postOperationEnabled);\r
this.definedEditorInput = definedEditorInput;\r
@Override\r
public IStatus execute(IProgressMonitor monitor, IAdaptable info)\r
throws ExecutionException {\r
- \r
- TermVocabulary termVocabulary = \r
+\r
+ TermVocabulary termVocabulary =\r
TermVocabulary.NewInstance(definedEditorInput.getTermType(),\r
- null, \r
- "Untitled", \r
- null, \r
- null); \r
- \r
- CdmStore.getService(IVocabularyService.class).save(termVocabulary);\r
+ null,\r
+ "Untitled",\r
+ null,\r
+ null);\r
+\r
+ termVocabulary = CdmStore.getService(IVocabularyService.class).save(termVocabulary);\r
definedEditorInput.getVocabularies().add(termVocabulary);\r
- \r
+\r
return postExecute(termVocabulary);\r
}\r
\r
// $Id$\r
/**\r
* Copyright (C) 2009 EDIT\r
-* European Distributed Institute of Taxonomy \r
+* European Distributed Institute of Taxonomy\r
* http://www.e-taxonomy.eu\r
-* \r
+*\r
* The contents of this file are subject to the Mozilla Public License Version 1.1\r
* See LICENSE.TXT at the top of this package for the full license terms.\r
*/\r
import eu.etaxonomy.cdm.api.service.DeleteResult;\r
import eu.etaxonomy.cdm.api.service.ITermService;\r
import eu.etaxonomy.cdm.api.service.IVocabularyService;\r
-import eu.etaxonomy.cdm.api.service.exception.DataChangeNoRollbackException;\r
-import eu.etaxonomy.cdm.model.common.DefinedTerm;\r
import eu.etaxonomy.cdm.model.common.DefinedTermBase;\r
import eu.etaxonomy.cdm.model.common.TermBase;\r
import eu.etaxonomy.cdm.model.common.TermVocabulary;\r
*/\r
public class DeleteTermBaseOperation extends AbstractPostTaxonOperation {\r
\r
- private TermEditorInput definedEditorInput;\r
- private TermBase termBase;\r
+ private final TermEditorInput definedEditorInput;\r
+ private final TermBase termBase;\r
private DefinedTermEditor definedTermEditor;\r
/**\r
* @param label\r
* @param undoContext\r
* @param postOperationEnabled\r
*/\r
- public DeleteTermBaseOperation(String label, \r
- IUndoContext undoContext, \r
+ public DeleteTermBaseOperation(String label,\r
+ IUndoContext undoContext,\r
TermBase termBase,\r
TermEditorInput definedEditorInput,\r
IPostOperationEnabled postOperationEnabled) {\r
super(label, undoContext, postOperationEnabled);\r
this.termBase = termBase;\r
- this.definedEditorInput = definedEditorInput; \r
+ this.definedEditorInput = definedEditorInput;\r
}\r
\r
/* (non-Javadoc)\r
@Override\r
public IStatus execute(IProgressMonitor monitor, IAdaptable info)\r
throws ExecutionException {\r
- \r
- \r
- \r
+\r
+\r
+\r
if (termBase instanceof TermVocabulary) {\r
if (((TermVocabulary)termBase).getCreatedBy() == null) {\r
IStatus status = new Status(IStatus.CANCEL, StoreUtil.getPluginId(), "This is a CDM system vocabulary");\r
MessagingUtils.warningDialog("Cannot delete vocabulary", termBase, status);\r
return status;\r
}\r
- \r
+\r
if (!((TermVocabulary)termBase).getTerms().isEmpty()) {\r
IStatus status = new Status(IStatus.CANCEL, StoreUtil.getPluginId(), "Delete all terms from this vocaulary before deleting the vocabulary.");\r
MessagingUtils.warningDialog("Vocabulary not empty", termBase, status);\r
return status;\r
- } \r
+ }\r
\r
- definedEditorInput.getVocabularies().remove((TermVocabulary)termBase); \r
- \r
- DeleteResult result = CdmStore.getService(IVocabularyService.class).delete((TermVocabulary)termBase);\r
+ definedEditorInput.getVocabularies().remove(termBase);\r
+\r
+ DeleteResult result = CdmStore.getService(IVocabularyService.class).delete(termBase.getUuid());\r
if (result.isError()){\r
StringBuffer errorString = new StringBuffer();\r
for (Exception e:result.getExceptions()){\r
}\r
MessageDialog.openError(null, "Delete failed", errorString.toString());\r
}\r
- \r
+\r
} else if (termBase instanceof DefinedTermBase) {\r
- \r
- \r
+\r
+\r
DefinedTermBase definedTermBase = (DefinedTermBase) termBase;\r
- \r
+\r
if (((DefinedTermBase)termBase).getCreatedBy() == null) {\r
IStatus status = new Status(IStatus.CANCEL, StoreUtil.getPluginId(), "This is a CDM system defined term");\r
MessagingUtils.warningDialog("Cannot delete defined term", termBase, status);\r
return status;\r
}\r
if(!definedTermBase.getIncludes().isEmpty()){\r
- IStatus status = new Status(IStatus.CANCEL, StoreUtil.getPluginId(), "This term includes other terms. Please delete the included terms before deleting this term."); \r
+ IStatus status = new Status(IStatus.CANCEL, StoreUtil.getPluginId(), "This term includes other terms. Please delete the included terms before deleting this term.");\r
MessagingUtils.warningDialog("Term has included terms", termBase, status);\r
return status;\r
- } \r
- \r
+ }\r
+\r
\r
DefinedTermBase partOf = definedTermBase.getPartOf();\r
if(partOf != null){\r
partOf.removeIncludes(definedTermBase);\r
}\r
- \r
+\r
DefinedTermBase kindOf = definedTermBase.getKindOf();\r
if(kindOf != null){\r
definedTermBase.removeGeneralization(kindOf);\r
}\r
- \r
+\r
TermVocabulary vocabulary = definedTermBase.getVocabulary();\r
if(vocabulary != null){\r
vocabulary.removeTerm(definedTermBase);\r
}\r
- \r
- DeleteResult result = CdmStore.getService(ITermService.class).delete((DefinedTermBase)termBase);\r
- \r
+\r
+ DeleteResult result = CdmStore.getService(ITermService.class).delete(termBase.getUuid());\r
+\r
if (result.isError()){\r
StringBuffer errorString = new StringBuffer();\r
for (Exception e:result.getExceptions()){\r
MessageDialog.openError(null, "Delete failed", errorString.toString());\r
}\r
}\r
- \r
+\r
return postExecute(termBase);\r
}\r
\r
// $Id$
/**
* Copyright (C) 2007 EDIT
- * European Distributed Institute of Taxonomy
+ * European Distributed Institute of Taxonomy
* http://www.e-taxonomy.eu
- *
+ *
* The contents of this file are subject to the Mozilla Public License Version 1.1
* See LICENSE.TXT at the top of this package for the full license terms.
*/
* <p>
* EditFeatureTreeWizardPage class.
* </p>
- *
+ *
* @author n.hoffmann
* @created Aug 5, 2010
* @version 1.0
* <p>
* Constructor for EditFeatureTreeWizardPage.
* </p>
- *
+ *
* @param pageName
* a {@link java.lang.String} object.
*/
/*
* (non-Javadoc)
- *
+ *
* @see
* org.eclipse.jface.dialogs.IDialogPage#createControl(org.eclipse.swt.widgets
* .Composite)
* <p>
* setSelectedTree
* </p>
- *
+ *
* @param featureTree
* a {@link eu.etaxonomy.cdm.model.description.FeatureTree}
* object.
.getAdditionalFeatures();
for (Feature feature : additionalFeatures) {
FeatureNode child = FeatureNode.NewInstance(feature);
- CdmStore.getService(IFeatureNodeService.class)
- .saveOrUpdate(child);
+ if(CdmStore.getCurrentSessionManager().isRemoting()) {
+ CdmStore.getService(IFeatureNodeService.class).merge(child, true);
+ } else {
+ CdmStore.getService(IFeatureNodeService.class).saveOrUpdate(child);
+ }
parent.addChild(child);
}
viewer.refresh();
*/
@Override
public void dragFinished(DragSourceEvent event) {
- if (!event.doit)
- return;
+ if (!event.doit) {
+ return;
+ }
// if the featureNode was moved, remove it from the source viewer
if (event.detail == DND.DROP_MOVE) {
IStructuredSelection selection = (IStructuredSelection) viewer
// $Id$
/**
* Copyright (C) 2007 EDIT
-* European Distributed Institute of Taxonomy
+* European Distributed Institute of Taxonomy
* http://www.e-taxonomy.eu
-*
+*
* The contents of this file are subject to the Mozilla Public License Version 1.1
* See LICENSE.TXT at the top of this package for the full license terms.
*/
package eu.etaxonomy.taxeditor.featuretree;
+import java.util.Arrays;
+import java.util.List;
+import java.util.Map;
+
import org.eclipse.jface.wizard.Wizard;
import eu.etaxonomy.cdm.api.conversation.ConversationHolder;
import eu.etaxonomy.cdm.api.service.IFeatureTreeService;
import eu.etaxonomy.cdm.model.description.FeatureTree;
+import eu.etaxonomy.taxeditor.session.ICdmEntitySession;
+import eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled;
import eu.etaxonomy.taxeditor.store.CdmStore;
/**
* @created Aug 5, 2010
* @version 1.0
*/
-public class FeatureTreeEditorWizard extends Wizard {
-
+public class FeatureTreeEditorWizard extends Wizard implements ICdmEntitySessionEnabled {
+
private SelectFeatureTreeWizardPage selectFeatureTreePage;
private EditFeatureTreeWizardPage editFeatureTreePage;
-
+
private FeatureTree selectedFeatureTree;
private ConversationHolder conversation;
-
+ private ICdmEntitySession cdmEntitySession;
+ private ICdmEntitySession previousCdmEntitySession;
+
/**
* <p>Constructor for FeatureTreeEditorWizard.</p>
*/
public FeatureTreeEditorWizard(){
conversation = CdmStore.createConversation();
+ previousCdmEntitySession = CdmStore.getCurrentSessionManager().getActiveSession();
+ cdmEntitySession = CdmStore.getCurrentSessionManager().newSession(this, true);
setWindowTitle("Feature Tree Editor");
}
-
+
/**
* <p>addPages</p>
*/
- public void addPages() {
+ @Override
+ public void addPages() {
selectFeatureTreePage = new SelectFeatureTreeWizardPage("SELECT");
addPage(selectFeatureTreePage);
-
+
editFeatureTreePage = new EditFeatureTreeWizardPage("EDIT");
addPage(editFeatureTreePage);
}
public boolean performFinish() {
try{
if (selectedFeatureTree != null){
- CdmStore.getService(IFeatureTreeService.class).saveOrUpdate(selectedFeatureTree);
+ if(CdmStore.getCurrentSessionManager().isRemoting()) {
+ CdmStore.getService(IFeatureTreeService.class).merge(selectedFeatureTree, true);
+ } else {
+ CdmStore.getService(IFeatureTreeService.class).saveOrUpdate(selectedFeatureTree);
+ }
}
conversation.commit();
}finally{
conversation.close();
+ cdmEntitySession.dispose();
+ if(previousCdmEntitySession != null) {
+ previousCdmEntitySession.bind();
+ }
}
-
+
return true;
}
+ /** {@inheritDoc} */
+ @Override
+ public boolean performCancel() {
+ cdmEntitySession.dispose();
+ if(previousCdmEntitySession != null) {
+ previousCdmEntitySession.bind();
+ }
+ return true;
+ }
+
/**
* <p>Setter for the field <code>selectedFeatureTree</code>.</p>
*
public FeatureTree getSelectedFeatureTree() {
return selectedFeatureTree;
}
-
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled#getCdmEntitySession()
+ */
+ @Override
+ public ICdmEntitySession getCdmEntitySession() {
+ // TODO Auto-generated method stub
+ return null;
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled#getRootEntities()
+ */
+ @Override
+ public List<FeatureTree> getRootEntities() {
+ return Arrays.asList(selectedFeatureTree);
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled#getPropertyPathsMap()
+ */
+ @Override
+ public Map<Object, List<String>> getPropertyPathsMap() {
+ // TODO Auto-generated method stub
+ return null;
+ }
+
}
--- /dev/null
+package eu.etaxonomy.taxeditor.handler;
+
+import org.eclipse.core.commands.AbstractHandler;
+import org.eclipse.core.commands.ExecutionEvent;
+import org.eclipse.core.commands.ExecutionException;
+import org.eclipse.jface.viewers.ISelection;
+import org.eclipse.jface.viewers.IStructuredSelection;
+import org.eclipse.ui.handlers.HandlerUtil;
+
+public class CreateFieldUnitHandler extends AbstractHandler {
+
+ @Override
+ public Object execute(ExecutionEvent event) throws ExecutionException {
+ ISelection currentSelection = HandlerUtil.getCurrentSelection(event);
+ if(currentSelection instanceof IStructuredSelection){
+ System.out.println(currentSelection);
+ }
+ return null;
+ }
+
+}
--- /dev/null
+// $Id$
+/**
+* Copyright (C) 2015 EDIT
+* European Distributed Institute of Taxonomy
+* http://www.e-taxonomy.eu
+*
+* The contents of this file are subject to the Mozilla Public License Version 1.1
+* See LICENSE.TXT at the top of this package for the full license terms.
+*/
+package eu.etaxonomy.taxeditor.handler;
+
+import java.util.Collection;
+
+import org.eclipse.core.commands.AbstractHandler;
+import org.eclipse.core.commands.ExecutionEvent;
+import org.eclipse.core.commands.ExecutionException;
+import org.eclipse.core.commands.IHandler;
+import org.eclipse.swt.SWT;
+
+import eu.etaxonomy.cdm.model.common.CdmBase;
+import eu.etaxonomy.taxeditor.model.AbstractUtility;
+import eu.etaxonomy.taxeditor.model.MessagingUtils;
+import eu.etaxonomy.taxeditor.session.ICdmEntitySession;
+import eu.etaxonomy.taxeditor.store.CdmStore;
+import eu.etaxonomy.taxeditor.view.sessions.InspectSessionsDialog;
+
+/**
+ * @author cmathew
+ * @date 18 Feb 2015
+ *
+ */
+public class OpenInspectSessionsHandler extends AbstractHandler implements IHandler {
+
+
+ /* (non-Javadoc)
+ * @see org.eclipse.core.commands.IHandler#execute(org.eclipse.core.commands.ExecutionEvent)
+ */
+ /** {@inheritDoc} */
+ @Override
+ public Object execute(ExecutionEvent event) throws ExecutionException {
+
+ Object principal = CdmStore.getCurrentAuthentiation().getPrincipal();
+
+ ICdmEntitySession activeSession = CdmStore.getCurrentSessionManager().getActiveSession();
+
+ if(activeSession == null) {
+ MessagingUtils.warningDialog("No Active Session", this, "Active Session is null");
+ } else {
+ Collection<CdmBase> rootEntities = activeSession.getRootEntities();
+ if(rootEntities == null || rootEntities.isEmpty()) {
+ MessagingUtils.warningDialog("No Root Entities", this, "No root entities to inspect");
+ } else {
+ InspectSessionsDialog dialog = new InspectSessionsDialog(AbstractUtility.getShell(), SWT.NONE);
+ dialog.open();
+ }
+
+ }
+
+ return null;
+
+ }
+}
--- /dev/null
+// $Id$
+/**
+* Copyright (C) 2007 EDIT
+* European Distributed Institute of Taxonomy
+* http://www.e-taxonomy.eu
+*
+* The contents of this file are subject to the Mozilla Public License Version 1.1
+* See LICENSE.TXT at the top of this package for the full license terms.
+*/
+
+package eu.etaxonomy.taxeditor.handler;
+
+import org.eclipse.core.commands.AbstractHandler;
+import org.eclipse.core.commands.ExecutionEvent;
+import org.eclipse.core.commands.ExecutionException;
+import org.eclipse.core.commands.IHandler;
+import org.eclipse.swt.SWT;
+import org.eclipse.ui.handlers.HandlerUtil;
+
+import eu.etaxonomy.taxeditor.remoting.source.CdmRemoteSource;
+import eu.etaxonomy.taxeditor.store.CdmStore;
+import eu.etaxonomy.taxeditor.ui.dialog.RemotingLoginDialog;
+
+/**
+ *
+ *
+ * @author c.mathew
+ */
+public class ReconnectHandler extends AbstractHandler implements IHandler {
+
+ /* (non-Javadoc)
+ * @see org.eclipse.core.commands.IHandler#execute(org.eclipse.core.commands.ExecutionEvent)
+ */
+ /** {@inheritDoc} */
+ @Override
+ public Object execute(ExecutionEvent event) throws ExecutionException {
+
+ RemotingLoginDialog loginDialog = new RemotingLoginDialog(HandlerUtil.getActiveShell(event),
+ SWT.DIALOG_TRIM | SWT.APPLICATION_MODAL);
+
+ loginDialog.open((CdmRemoteSource) CdmStore.getActiveCdmSource(), true, true);
+
+ return null;
+
+ }
+}
--- /dev/null
+// $Id$
+/**
+* Copyright (C) 2007 EDIT
+* European Distributed Institute of Taxonomy
+* http://www.e-taxonomy.eu
+*
+* The contents of this file are subject to the Mozilla Public License Version 1.1
+* See LICENSE.TXT at the top of this package for the full license terms.
+*/
+
+package eu.etaxonomy.taxeditor.handler;
+
+import org.eclipse.core.commands.AbstractHandler;
+import org.eclipse.core.commands.ExecutionEvent;
+import org.eclipse.core.commands.ExecutionException;
+import org.eclipse.core.commands.IHandler;
+import org.eclipse.swt.SWT;
+import org.eclipse.ui.handlers.HandlerUtil;
+
+import eu.etaxonomy.taxeditor.ui.dialog.RemotingLoginDialog;
+
+/**
+ *
+ *
+ * @author c.mathew
+ */
+public class ShowRemotingLoginWindowHandler extends AbstractHandler implements IHandler{
+
+ /* (non-Javadoc)
+ * @see org.eclipse.core.commands.IHandler#execute(org.eclipse.core.commands.ExecutionEvent)
+ */
+ /** {@inheritDoc} */
+ @Override
+ public Object execute(ExecutionEvent event) throws ExecutionException {
+
+ RemotingLoginDialog loginDialog = new RemotingLoginDialog(HandlerUtil.getActiveShell(event),
+ SWT.DIALOG_TRIM | SWT.APPLICATION_MODAL);
+ loginDialog.open();
+
+
+ return null;
+
+ }
+}
--- /dev/null
+// $Id$
+/**
+* Copyright (C) 2007 EDIT
+* European Distributed Institute of Taxonomy
+* http://www.e-taxonomy.eu
+*
+* The contents of this file are subject to the Mozilla Public License Version 1.1
+* See LICENSE.TXT at the top of this package for the full license terms.
+*/
+
+package eu.etaxonomy.taxeditor.handler;
+
+import org.eclipse.core.commands.AbstractHandler;
+import org.eclipse.core.commands.ExecutionEvent;
+import org.eclipse.core.commands.ExecutionException;
+import org.eclipse.core.commands.IHandler;
+import org.eclipse.swt.SWT;
+import org.eclipse.ui.handlers.HandlerUtil;
+
+import eu.etaxonomy.taxeditor.remoting.source.CdmRemoteSource;
+import eu.etaxonomy.taxeditor.store.CdmStore;
+import eu.etaxonomy.taxeditor.ui.dialog.RemotingLoginDialog;
+
+/**
+ *
+ *
+ * @author c.mathew
+ */
+public class SwitchUserHandler extends AbstractHandler implements IHandler {
+
+ /* (non-Javadoc)
+ * @see org.eclipse.core.commands.IHandler#execute(org.eclipse.core.commands.ExecutionEvent)
+ */
+ /** {@inheritDoc} */
+ @Override
+ public Object execute(ExecutionEvent event) throws ExecutionException {
+
+ RemotingLoginDialog loginDialog = new RemotingLoginDialog(HandlerUtil.getActiveShell(event),
+ SWT.DIALOG_TRIM | SWT.APPLICATION_MODAL);
+
+ loginDialog.open((CdmRemoteSource) CdmStore.getActiveCdmSource(), false, false);
+
+ return null;
+
+ }
+}
+
--- /dev/null
+package eu.etaxonomy.taxeditor.handler;
+
+import java.util.UUID;
+
+import org.eclipse.core.commands.AbstractParameterValueConverter;
+import org.eclipse.core.commands.ParameterValueConversionException;
+
+public class UuidParameterConverter extends AbstractParameterValueConverter {
+
+ public UuidParameterConverter() {
+ // TODO Auto-generated constructor stub
+ }
+
+ @Override
+ public Object convertToObject(String parameterValue) throws ParameterValueConversionException {
+ return UUID.fromString(parameterValue);
+ }
+
+ @Override
+ public String convertToString(Object parameterValue) throws ParameterValueConversionException {
+ return parameterValue.toString();
+ }
+
+}
// $Id$
/**
* Copyright (C) 2007 EDIT
- * European Distributed Institute of Taxonomy
+ * European Distributed Institute of Taxonomy
* http://www.e-taxonomy.eu
- *
+ *
* The contents of this file are subject to the Mozilla Public License Version 1.1
* See LICENSE.TXT at the top of this package for the full license terms.
*/
* <p>
* Abstract AbstractIOHandler class.
* </p>
- *
+ *
* @author n.hoffmann
* @created Sep 11, 2009
* @version 1.0
* <p>
* Constructor for AbstractIOHandler.
* </p>
- *
+ *
* @param applicationController
* a
* {@link eu.etaxonomy.cdm.api.application.CdmApplicationController}
/**
* Starts the IO process
- *
+ *
* @param configurator
* a CONFIGURATOR object.
*/
public void run(final CONFIGURATOR configurator) {
- // create job
- Job job = createIOJob(configurator);
- // configure the job
- job.setProperty(IProgressConstants.KEEP_PROPERTY, true);
- job.setUser(true);
- // schedule job
- job.schedule();
+ // create job
+ Job job = createIOJob(configurator);
+ run(job);
+ }
+ public void run(Job job) {
+ // configure the job
+ job.setProperty(IProgressConstants.KEEP_PROPERTY, true);
+ job.setUser(true);
+ // schedule job
+ job.schedule();
}
/**
* <p>
* createIOJob
* </p>
- *
+ *
* @param configurator
* a CONFIGURATOR object.
* @return a {@link org.eclipse.core.runtime.jobs.Job} object.
*/
protected abstract Job createIOJob(CONFIGURATOR configurator);
+
}
package eu.etaxonomy.taxeditor.io;
+import java.io.File;
+import java.io.FileOutputStream;
+import java.util.List;
+
import org.eclipse.core.runtime.Assert;
import org.eclipse.core.runtime.IProgressMonitor;
import org.eclipse.core.runtime.IStatus;
import org.eclipse.swt.widgets.Display;
import org.eclipse.ui.IWorkbenchPart;
+import eu.etaxonomy.cdm.api.application.CdmApplicationState;
import eu.etaxonomy.cdm.api.application.ICdmApplicationConfiguration;
import eu.etaxonomy.cdm.api.conversation.IConversationEnabled;
import eu.etaxonomy.cdm.io.common.CdmDefaultExport;
+import eu.etaxonomy.cdm.io.common.ExportResult;
import eu.etaxonomy.cdm.io.common.IExportConfigurator;
import eu.etaxonomy.cdm.io.common.IIoConfigurator;
import eu.etaxonomy.cdm.io.jaxb.JaxbExportConfigurator;
import eu.etaxonomy.cdm.io.sdd.out.SDDExportConfigurator;
+import eu.etaxonomy.cdm.io.service.IIOService;
import eu.etaxonomy.taxeditor.model.CdmProgressMonitorAdapter;
import eu.etaxonomy.taxeditor.model.MessagingUtils;
import eu.etaxonomy.taxeditor.store.StoreUtil;
+import eu.etaxonomy.taxeditor.store.internal.TaxeditorStorePlugin;
/**
* <p>
return job;
}
+ public Job createIOServiceJob(final IExportConfigurator configurator, final File exportFile) {
+ Assert.isNotNull(configurator, "Configuration may not be null");
+
+ final Display display = Display.getCurrent();
+
+ Job job = new Job("Export: " + configurator.getClass().getSimpleName()) {
+ @Override
+ protected IStatus run(IProgressMonitor monitor) {
+ monitor.beginTask("Exporting database. This will take some time.", IProgressMonitor.UNKNOWN);
+ try {
+ IIOService ioService = CdmApplicationState.getIOService();
+
+ ExportResult result = ioService.export(configurator);
+ List<byte[]> dataList = result.getExportData();
+ byte[] exportData = dataList.get(0);
+
+ FileOutputStream stream = new FileOutputStream(exportFile);
+ try {
+ stream.write(exportData);
+ } finally {
+ stream.close();
+ }
+
+ } catch (Exception e) {
+ MessagingUtils.errorDialog("Error exporting data",
+ this,
+ e.getMessage(),
+ TaxeditorStorePlugin.PLUGIN_ID,
+ e,
+ true);
+ }
+ return Status.OK_STATUS;
+ }
+ };
+ return job;
+ }
/**
* @param jaxb
* @return
return (SDDExportConfigurator) getConfigurator(TYPE.Sdd);
}
+
+
}
// $Id$
/**
* Copyright (C) 2007 EDIT
- * European Distributed Institute of Taxonomy
+ * European Distributed Institute of Taxonomy
* http://www.e-taxonomy.eu
- *
+ *
* The contents of this file are subject to the Mozilla Public License Version 1.1
* See LICENSE.TXT at the top of this package for the full license terms.
*/
package eu.etaxonomy.taxeditor.io;
+import java.io.File;
+import java.io.InputStream;
+import java.nio.file.Files;
+import java.nio.file.Path;
+import java.nio.file.Paths;
+
+import org.apache.commons.io.IOUtils;
import org.eclipse.core.runtime.Assert;
import org.eclipse.core.runtime.IProgressMonitor;
import org.eclipse.core.runtime.IStatus;
import org.eclipse.core.runtime.jobs.Job;
import org.eclipse.swt.widgets.Display;
-import eu.etaxonomy.cdm.api.application.ICdmApplicationConfiguration;
+import eu.etaxonomy.cdm.api.application.CdmApplicationState;
import eu.etaxonomy.cdm.api.application.ICdmApplicationConfiguration;
import eu.etaxonomy.cdm.io.common.CdmDefaultImport;
import eu.etaxonomy.cdm.io.common.IImportConfigurator;
+import eu.etaxonomy.cdm.io.common.IImportConfigurator.SOURCE_TYPE;
import eu.etaxonomy.cdm.io.excel.taxa.NormalExplicitImportConfigurator;
import eu.etaxonomy.cdm.io.jaxb.JaxbImportConfigurator;
import eu.etaxonomy.cdm.io.reference.endnote.in.EndnoteImportConfigurator;
import eu.etaxonomy.cdm.io.sdd.in.SDDImportConfigurator;
+import eu.etaxonomy.cdm.io.service.IIOService;
import eu.etaxonomy.cdm.io.specimen.abcd206.in.Abcd206ImportConfigurator;
import eu.etaxonomy.cdm.io.specimen.excel.in.SpecimenCdmExcelImportConfigurator;
import eu.etaxonomy.cdm.io.tcsxml.in.TcsXmlImportConfigurator;
import eu.etaxonomy.taxeditor.model.CdmProgressMonitorAdapter;
import eu.etaxonomy.taxeditor.model.MessagingUtils;
import eu.etaxonomy.taxeditor.store.CdmStore;
+import eu.etaxonomy.taxeditor.store.internal.TaxeditorStorePlugin;
/**
* <p>
* ImportHandler class.
* </p>
- *
+ *
* @author n.hoffmann
* @created Sep 11, 2009
* @version 1.0
* <p>
* NewInstance
* </p>
- *
+ *
* @param applicationConfiguration
* a
* {@link eu.etaxonomy.cdm.api.application.CdmApplicationController}
/**
* Use when importing data into the current application context
- *
+ *
* @param configurator
* a {@link eu.etaxonomy.cdm.io.common.IImportConfigurator}
* object.
monitor.worked(5);
CdmDefaultImport<IImportConfigurator> importer = new CdmDefaultImport<IImportConfigurator>();
- importer.setCdmAppController((ICdmApplicationConfiguration) applicationConfiguration);
+ importer.setCdmAppController(applicationConfiguration);
monitor.worked(5);
try {
}
+ public Job createIOServiceJob(IImportConfigurator configurator, InputStream is, SOURCE_TYPE type) {
+
+ try {
+ return createIOServiceJob(configurator, IOUtils.toByteArray(is), type);
+ } catch (Exception e) {
+ MessagingUtils.errorDialog("Error importing input stream",
+ this,
+ e.getMessage(),
+ TaxeditorStorePlugin.PLUGIN_ID,
+ e,
+ true);
+ }
+ return null;
+ }
+
+ public Job createIOServiceJob(IImportConfigurator configurator, File importFile, SOURCE_TYPE type) {
+ Path path = Paths.get(importFile.toURI());
+ try {
+ return createIOServiceJob(configurator, Files.readAllBytes(path), type);
+ } catch (Exception e) {
+ MessagingUtils.errorDialog("Error importing file",
+ this,
+ e.getMessage(),
+ TaxeditorStorePlugin.PLUGIN_ID,
+ e,
+ true);
+ }
+ return null;
+ }
+
+ public Job createIOServiceJob(final IImportConfigurator configurator, final byte[] data, final SOURCE_TYPE type) {
+ Assert.isNotNull(configurator, "Configuration may not be null");
+ final Display display = Display.getDefault();
+ Job job = new Job("Import: " + configurator.getClass().getSimpleName()) {
+
+ @Override
+ protected IStatus run(IProgressMonitor monitor) {
+ monitor.beginTask("Importing data", IProgressMonitor.UNKNOWN);
+ IIOService ioService = CdmApplicationState.getIOService();
+
+ ioService.importData(configurator, data, type);
+
+ monitor.done();
+
+ display.asyncExec(new Runnable() {
+
+ @Override
+ public void run() {
+ CdmStore.getContextManager().notifyContextRefresh();
+ }
+ });
+
+ return Status.OK_STATUS;
+ }
+ };
+
+ return job;
+
+ }
+
private IImportConfigurator getConfigurator(TYPE type) {
Assert.isNotNull(type, "Type should not be null");
* <p>
* JaxbConfigurator
* </p>
- *
+ *
* @return a {@link eu.etaxonomy.cdm.io.jaxb.JaxbImportConfigurator} object.
*/
public final JaxbImportConfigurator JaxbConfigurator() {
* <p>
* TcsConfigurator
* </p>
- *
+ *
* @return a {@link eu.etaxonomy.cdm.io.tcsxml.in.TcsXmlImportConfigurator}
* object.
*/
* <p>
* EndnoteConfigurator
* </p>
- *
+ *
* @return a
* {@link eu.etaxonomy.cdm.io.reference.endnote.in.EndnoteImportConfigurator}
* object.
* <p>
* NormalExplicitConfigurator
* </p>
- *
+ *
* @return a
* {@link eu.etaxonomy.cdm.io.excel.taxa.NormalExplicitImportConfigurator}
* object.
* <p>
* SddConfigurator
* </p>
- *
+ *
* @return a {@link eu.etaxonomy.cdm.io.sdd.in.SDDImportConfigurator}
* object.
*/
* <p>
* AbcdConfigurator
* </p>
- *
+ *
* @return a
* {@link eu.etaxonomy.cdm.io.specimen.abcd206.in.Abcd206ImportConfigurator}
* object.
return (SpecimenCdmExcelImportConfigurator) getConfigurator(TYPE.SpecimenCdmExcel);
}
+
}
import java.net.URI;
import org.apache.log4j.Logger;
+import org.eclipse.core.runtime.jobs.Job;
import org.eclipse.jface.viewers.IStructuredSelection;
import org.eclipse.ui.IWorkbench;
import eu.etaxonomy.cdm.database.DbSchemaValidation;
+import eu.etaxonomy.cdm.io.common.IImportConfigurator.SOURCE_TYPE;
import eu.etaxonomy.cdm.io.specimen.abcd206.in.Abcd206ImportConfigurator;
import eu.etaxonomy.taxeditor.model.MessagingUtils;
import eu.etaxonomy.taxeditor.store.CdmStore;
/** {@inheritDoc} */
@Override
public boolean performFinish() {
- URI source = dataSourcePage.getUri();
- try {
- configurator.setSource(new FileInputStream(new File(source)));
- } catch (FileNotFoundException e) {
- MessagingUtils.errorDialog("File not found.", this, "Import file was not found.", TaxeditorStorePlugin.PLUGIN_ID, e, false);
- logger.error("File not found!", e);
- return false;
- }
- configurator.setDbSchemaValidation(DbSchemaValidation.CREATE);
+ URI source = dataSourcePage.getUri();
+ configurator.setDbSchemaValidation(DbSchemaValidation.CREATE);
- if(classificationChooserWizardPage.getClassification()!=null){
- configurator.setClassificationUuid(classificationChooserWizardPage.getClassification().getUuid());
- }
- configurator.setReportUri(classificationChooserWizardPage.getReportUri());
+ if(classificationChooserWizardPage.getClassification()!=null){
+ configurator.setClassificationUuid(classificationChooserWizardPage.getClassification().getUuid());
+ }
+ configurator.setReportUri(classificationChooserWizardPage.getReportUri());
- CdmStore.getImportManager().run(configurator);
- return true;
+ if(CdmStore.getCurrentSessionManager().isRemoting()) {
+ Job job = CdmStore.getImportManager().createIOServiceJob(configurator, new File(source), SOURCE_TYPE.INPUTSTREAM);
+ CdmStore.getImportManager().run(job);
+ } else {
+ try {
+ configurator.setSource(new FileInputStream(new File(source)));
+ } catch (FileNotFoundException e) {
+ MessagingUtils.errorDialog("File not found.", this, "Import file was not found.", TaxeditorStorePlugin.PLUGIN_ID, e, false);
+ logger.error("File not found!", e);
+ return false;
+ }
+ CdmStore.getImportManager().run(configurator);
+ }
+ return true;
}
import java.util.List;
import java.util.UUID;
+import org.eclipse.core.runtime.jobs.Job;
import org.eclipse.jface.viewers.IStructuredSelection;
import org.eclipse.swt.widgets.Combo;
import org.eclipse.ui.IWorkbench;
+import org.eclipse.ui.progress.IProgressConstants;
import eu.etaxonomy.cdm.io.csv.redlist.demo.CsvDemoExportConfigurator;
import eu.etaxonomy.cdm.model.taxon.Classification;
configurator.setLastChange(true);
}
}
- configurator.setDestination(new File(urlString));
-
- CdmStore.getExportManager().run(configurator);
-
+ if(CdmStore.getCurrentSessionManager().isRemoting()) {
+ // create job
+ Job job = CdmStore.getExportManager().createIOServiceJob(configurator, new File(urlString));
+ // configure the job
+ job.setProperty(IProgressConstants.KEEP_PROPERTY, true);
+ job.setUser(true);
+ // schedule job
+ job.schedule();
+ } else {
+
+ configurator.setDestination(new File(urlString));
+ CdmStore.getExportManager().run(configurator);
+ }
return true;
}
\r
import java.io.File;\r
\r
+import org.eclipse.core.runtime.jobs.Job;\r
import org.eclipse.jface.viewers.IStructuredSelection;\r
import org.eclipse.swt.widgets.Combo;\r
import org.eclipse.ui.IWorkbench;\r
+import org.eclipse.ui.progress.IProgressConstants;\r
\r
import eu.etaxonomy.cdm.io.csv.caryophyllales.out.CsvNameExportConfigurator;\r
import eu.etaxonomy.taxeditor.store.CdmStore;\r
*/\r
@Override\r
public boolean performFinish() {\r
- String urlString = page.getFolderText() + File.separator\r
- + page.getExportFileName();\r
-\r
- final Combo combo = page.getCombo();\r
- \r
- configurator.setDestination(new File(urlString));\r
-\r
- CdmStore.getExportManager().run(configurator);\r
-\r
+ String urlString = page.getFolderText() + File.separator\r
+ + page.getExportFileName();\r
+\r
+ final Combo combo = page.getCombo();\r
+\r
+ if(CdmStore.getCurrentSessionManager().isRemoting()) {\r
+ // create job\r
+ Job job = CdmStore.getExportManager().createIOServiceJob(configurator, new File(urlString));\r
+ // configure the job\r
+ job.setProperty(IProgressConstants.KEEP_PROPERTY, true);\r
+ job.setUser(true);\r
+ // schedule job\r
+ job.schedule();\r
+ } else {\r
+ configurator.setDestination(new File(urlString));\r
+ CdmStore.getExportManager().run(configurator);\r
+ }\r
return true;\r
}\r
\r
import java.util.List;\r
import java.util.UUID;\r
\r
+import org.eclipse.core.runtime.jobs.Job;\r
import org.eclipse.jface.viewers.IStructuredSelection;\r
import org.eclipse.swt.widgets.Combo;\r
import org.eclipse.ui.IWorkbench;\r
+import org.eclipse.ui.progress.IProgressConstants;\r
\r
import eu.etaxonomy.cdm.io.csv.caryophyllales.out.CsvNameExportConfigurator;\r
import eu.etaxonomy.cdm.model.taxon.Classification;\r
import eu.etaxonomy.taxeditor.store.CdmStore;\r
\r
public class CsvPrintExportWizard extends CsvNameExportWizard{\r
- \r
- \r
+\r
+\r
private final String description = "Export the contents of the currently selected database into Semicolon Separated Value format.";\r
@Override\r
public void init(IWorkbench workbench, IStructuredSelection selection) {\r
\r
@Override\r
public CsvNameExportConfigurator getConfigurator() {\r
- \r
+\r
return configurator;\r
}\r
\r
- \r
+\r
\r
/*\r
* (non-Javadoc)\r
set.add(c.getUuid());\r
}\r
}\r
- \r
+\r
configurator.setHasHeaderLines(true);\r
- \r
+\r
}\r
- } else{ \r
+ } else{\r
configurator.setClassificationUUID(listClassifications.get(0).getUuid());\r
}\r
- configurator.setDestination(new File(urlString));\r
-\r
- CdmStore.getExportManager().run(configurator);\r
\r
+ if(CdmStore.getCurrentSessionManager().isRemoting()) {\r
+ // create job\r
+ Job job = CdmStore.getExportManager().createIOServiceJob(configurator, new File(urlString));\r
+ // configure the job\r
+ job.setProperty(IProgressConstants.KEEP_PROPERTY, true);\r
+ job.setUser(true);\r
+ // schedule job\r
+ job.schedule();\r
+ } else {\r
+ configurator.setDestination(new File(urlString));\r
+ CdmStore.getExportManager().run(configurator);\r
+ }\r
return true;\r
}\r
\r
package eu.etaxonomy.taxeditor.io.wizard;
+import java.io.File;
import java.net.URI;
+import org.eclipse.core.runtime.jobs.Job;
import org.eclipse.jface.viewers.IStructuredSelection;
import org.eclipse.ui.IWorkbench;
import eu.etaxonomy.cdm.database.DbSchemaValidation;
+import eu.etaxonomy.cdm.io.common.IImportConfigurator.SOURCE_TYPE;
import eu.etaxonomy.cdm.io.excel.taxa.NormalExplicitImportConfigurator;
import eu.etaxonomy.taxeditor.store.CdmStore;
configurator.setSource(source);
configurator.setDbSchemaValidation(DbSchemaValidation.CREATE);
- CdmStore.getImportManager().run(configurator);
+ if(CdmStore.getCurrentSessionManager().isRemoting()) {
+ Job job = CdmStore.getImportManager().createIOServiceJob(configurator, new File(source), SOURCE_TYPE.URI);
+ CdmStore.getImportManager().run(job);
+ } else {
+ CdmStore.getImportManager().run(configurator);
+ }
+
return true;
}
import org.eclipse.swt.widgets.Text;
import eu.etaxonomy.cdm.model.taxon.Classification;
-import eu.etaxonomy.cdm.remote.CdmRemoteSourceException;
import eu.etaxonomy.taxeditor.datasource.CdmDataSourceRepository;
+import eu.etaxonomy.taxeditor.remoting.source.CdmRemoteSourceException;
import eu.etaxonomy.taxeditor.store.CdmStore;
/**
// $Id$
/**
* Copyright (C) 2007 EDIT
-* European Distributed Institute of Taxonomy
+* European Distributed Institute of Taxonomy
* http://www.e-taxonomy.eu
-*
+*
* The contents of this file are subject to the Mozilla Public License Version 1.1
* See LICENSE.TXT at the top of this package for the full license terms.
*/
import java.io.File;
import java.net.URI;
+import org.eclipse.core.runtime.jobs.Job;
import org.eclipse.jface.viewers.IStructuredSelection;
import org.eclipse.ui.IWorkbench;
+import org.eclipse.ui.progress.IProgressConstants;
import eu.etaxonomy.cdm.io.jaxb.JaxbExportConfigurator;
import eu.etaxonomy.taxeditor.store.CdmStore;
* @see org.eclipse.ui.IWorkbenchWizard#init(org.eclipse.ui.IWorkbench, org.eclipse.jface.viewers.IStructuredSelection)
*/
/** {@inheritDoc} */
- public void init(IWorkbench workbench, IStructuredSelection selection) {
+ @Override
+ public void init(IWorkbench workbench, IStructuredSelection selection) {
this.setWindowTitle("JAXB Export");
this.configurator = CdmStore.getExportManager().JaxbConfigurator();
}
-
+
/* (non-Javadoc)
* @see org.eclipse.jface.wizard.Wizard#performFinish()
*/
@Override
public boolean performFinish() {
boolean performFinish = false;
- URI urlString;
- File savePath = new File(page.getFolderText() + File.separator + page.getExportFileName());
- urlString = savePath.toURI();
- //orig: urlString = new URI(page.getFolderText() + File.separator + page.getExportFileName());
+
+ File exportFile = new File(page.getFolderText() + File.separator + page.getExportFileName());
+ URI urlString = exportFile.toURI();
configurator.setDestination(urlString);
- CdmStore.getExportManager().run(configurator);
+ if(CdmStore.getCurrentSessionManager().isRemoting()) {
+ // create job
+ Job job = CdmStore.getExportManager().createIOServiceJob(configurator, exportFile);
+ // configure the job
+ job.setProperty(IProgressConstants.KEEP_PROPERTY, true);
+ job.setUser(true);
+ // schedule job
+ job.schedule();
+ } else {
+ CdmStore.getExportManager().run(configurator);
+ }
performFinish = true;
return performFinish;
}
@Override
public void addPages() {
super.addPages();
-
+
page = ExportToFileDestinationWizardPage.Jaxb();
addPage(page);
}
public JaxbExportConfigurator getConfigurator() {
return configurator;
}
-
+
}
// $Id$
/**
* Copyright (C) 2007 EDIT
-* European Distributed Institute of Taxonomy
+* European Distributed Institute of Taxonomy
* http://www.e-taxonomy.eu
-*
+*
* The contents of this file are subject to the Mozilla Public License Version 1.1
* See LICENSE.TXT at the top of this package for the full license terms.
*/
import java.io.File;
+import org.eclipse.core.runtime.jobs.Job;
import org.eclipse.jface.viewers.IStructuredSelection;
import org.eclipse.ui.IWorkbench;
+import org.eclipse.ui.progress.IProgressConstants;
import eu.etaxonomy.cdm.io.sdd.out.SDDExportConfigurator;
import eu.etaxonomy.taxeditor.store.CdmStore;
public class SddExportWizard extends AbstractExportWizard<SDDExportConfigurator> {
private ExportToFileDestinationWizardPage page;
-
+
private SDDExportConfigurator configurator;
-
+
/* (non-Javadoc)
* @see eu.etaxonomy.taxeditor.io.wizard.AbstractExportWizard#getConfigurator()
*/
/** {@inheritDoc} */
@Override
public boolean performFinish() {
- File file = new File(page.getFolderText() + File.separator + page.getExportFileName());
-
- configurator.setDestination(file);
-
- CdmStore.getExportManager().run(configurator);
-
- return true;
+ File file = new File(page.getFolderText() + File.separator + page.getExportFileName());
+
+ if(CdmStore.getCurrentSessionManager().isRemoting()) {
+ // create job
+ Job job = CdmStore.getExportManager().createIOServiceJob(configurator, file);
+ // configure the job
+ job.setProperty(IProgressConstants.KEEP_PROPERTY, true);
+ job.setUser(true);
+ // schedule job
+ job.schedule();
+ } else {
+ configurator.setDestination(file);
+ CdmStore.getExportManager().run(configurator);
+ }
+ return true;
}
/*
@Override
public void addPages() {
super.addPages();
-
+
page = ExportToFileDestinationWizardPage.Sdd();
addPage(page);
}
-
+
/* (non-Javadoc)
* @see org.eclipse.ui.IWorkbenchWizard#init(org.eclipse.ui.IWorkbench, org.eclipse.jface.viewers.IStructuredSelection)
*/
/** {@inheritDoc} */
- public void init(IWorkbench workbench, IStructuredSelection selection) {
+ @Override
+ public void init(IWorkbench workbench, IStructuredSelection selection) {
this.setWindowTitle("SDD Export");
this.configurator = CdmStore.getExportManager().SddConfigurator();
}
// $Id$
/**
* Copyright (C) 2007 EDIT
-* European Distributed Institute of Taxonomy
+* European Distributed Institute of Taxonomy
* http://www.e-taxonomy.eu
-*
+*
* The contents of this file are subject to the Mozilla Public License Version 1.1
* See LICENSE.TXT at the top of this package for the full license terms.
*/
package eu.etaxonomy.taxeditor.io.wizard;
+import java.io.File;
import java.net.URI;
+import org.eclipse.core.runtime.jobs.Job;
import org.eclipse.jface.viewers.IStructuredSelection;
import org.eclipse.ui.IWorkbench;
import eu.etaxonomy.cdm.database.DbSchemaValidation;
+import eu.etaxonomy.cdm.io.common.IImportConfigurator.SOURCE_TYPE;
import eu.etaxonomy.cdm.io.sdd.in.SDDImportConfigurator;
import eu.etaxonomy.taxeditor.store.CdmStore;
public class SddImportWizard extends AbstractImportWizard<SDDImportConfigurator> {
private SDDImportConfigurator configurator;
-
+
private ImportFromFileDataSourceWizardPage dataSourcePage;
-
+
/* (non-Javadoc)
* @see eu.etaxonomy.taxeditor.io.wizard.AbstractImportWizard#getConfigurator()
*/
public SDDImportConfigurator getConfigurator() {
return configurator;
}
-
+
/*
* (non-Javadoc)
* @see org.eclipse.jface.wizard.Wizard#addPage(org.eclipse.jface.wizard.IWizardPage)
@Override
public void addPages() {
super.addPages();
-
- dataSourcePage = new ImportFromFileDataSourceWizardPage("Choose File",
+
+ dataSourcePage = new ImportFromFileDataSourceWizardPage("Choose File",
"Please choose an XML file in the SDD format.", new String[]{"*.xml", "*.sdd"});
addPage(dataSourcePage);
}
-
+
/* (non-Javadoc)
* @see org.eclipse.jface.wizard.Wizard#performFinish()
*/
URI source = dataSourcePage.getUri();
configurator.setSource(source);
configurator.setDbSchemaValidation(DbSchemaValidation.CREATE);
-
- CdmStore.getImportManager().run(configurator);
-
+
+ if(CdmStore.getCurrentSessionManager().isRemoting()) {
+ Job job = CdmStore.getImportManager().createIOServiceJob(configurator, new File(source), SOURCE_TYPE.URI);
+ CdmStore.getImportManager().run(job);
+ } else {
+ CdmStore.getImportManager().run(configurator);
+ }
+
return true;
}
* @see org.eclipse.ui.IWorkbenchWizard#init(org.eclipse.ui.IWorkbench, org.eclipse.jface.viewers.IStructuredSelection)
*/
/** {@inheritDoc} */
- public void init(IWorkbench workbench, IStructuredSelection selection) {
+ @Override
+ public void init(IWorkbench workbench, IStructuredSelection selection) {
super.init(workbench, selection);
configurator = CdmStore.getImportManager().SddConfigurator();
}
// $Id$
/**
* Copyright (C) 2007 EDIT
-* European Distributed Institute of Taxonomy
+* European Distributed Institute of Taxonomy
* http://www.e-taxonomy.eu
-*
+*
* The contents of this file are subject to the Mozilla Public License Version 1.1
* See LICENSE.TXT at the top of this package for the full license terms.
*/
package eu.etaxonomy.taxeditor.io.wizard;
+import java.io.File;
import java.net.URI;
+import org.eclipse.core.runtime.jobs.Job;
import org.eclipse.jface.viewers.IStructuredSelection;
import org.eclipse.ui.IWorkbench;
import eu.etaxonomy.cdm.database.DbSchemaValidation;
+import eu.etaxonomy.cdm.io.common.IImportConfigurator.SOURCE_TYPE;
import eu.etaxonomy.cdm.io.tcsxml.in.TcsXmlImportConfigurator;
import eu.etaxonomy.taxeditor.store.CdmStore;
* @created 15.06.2009
* @version 1.0
*/
-public class TcsImportWizard extends AbstractImportWizard<TcsXmlImportConfigurator>{
-
+public class TcsImportWizard extends AbstractImportWizard<TcsXmlImportConfigurator> {
+
private TcsXmlImportConfigurator configurator;
private ImportFromFileDataSourceWizardPage dataSourcePage;
/** {@inheritDoc} */
@Override
public boolean performFinish() {
- URI source = dataSourcePage.getUri();
- configurator.setSource(source);
- configurator.setDbSchemaValidation(DbSchemaValidation.CREATE);
-
- CdmStore.getImportManager().run(configurator);
-
- return true;
+ URI source = dataSourcePage.getUri();
+ configurator.setSource(source);
+ configurator.setDbSchemaValidation(DbSchemaValidation.CREATE);
+
+ if(CdmStore.getCurrentSessionManager().isRemoting()) {
+ Job job = CdmStore.getImportManager().createIOServiceJob(configurator, new File(source), SOURCE_TYPE.URI);
+ CdmStore.getImportManager().run(job);
+ } else {
+ CdmStore.getImportManager().run(configurator);
+ }
+
+ return true;
}
/* (non-Javadoc)
* @see org.eclipse.ui.IWorkbenchWizard#init(org.eclipse.ui.IWorkbench, org.eclipse.jface.viewers.IStructuredSelection)
*/
/** {@inheritDoc} */
- public void init(IWorkbench workbench, IStructuredSelection selection) {
+ @Override
+ public void init(IWorkbench workbench, IStructuredSelection selection) {
super.init(workbench, selection);
configurator = CdmStore.getImportManager().TcsConfigurator();
}
@Override
public void addPages() {
super.addPages();
-
+
dataSourcePage = ImportFromFileDataSourceWizardPage.XML();
addPage(dataSourcePage);
}
import java.util.TreeSet;
import org.eclipse.core.commands.ExecutionException;
+import org.eclipse.core.commands.NotEnabledException;
+import org.eclipse.core.commands.NotHandledException;
+import org.eclipse.core.commands.common.NotDefinedException;
+import org.eclipse.core.commands.operations.AbstractOperation;
import org.eclipse.core.commands.operations.IOperationHistory;
import org.eclipse.core.runtime.IAdaptable;
import org.eclipse.core.runtime.IProgressMonitor;
import org.eclipse.ui.IWorkbenchPart;
import org.eclipse.ui.PartInitException;
import org.eclipse.ui.PlatformUI;
+import org.eclipse.ui.handlers.IHandlerService;
import org.eclipse.ui.ide.undo.WorkspaceUndoUtil;
import org.eclipse.ui.part.EditorPart;
import org.eclipse.ui.progress.IProgressService;
import eu.etaxonomy.cdm.model.common.IEnumTerm;
import eu.etaxonomy.taxeditor.operation.AbstractPostOperation;
import eu.etaxonomy.taxeditor.operation.IPostOperationEnabled;
+import eu.etaxonomy.taxeditor.operation.RemotingCdmHandler;
import eu.etaxonomy.taxeditor.store.internal.TaxeditorStorePlugin;
import eu.etaxonomy.taxeditor.view.AbstractCdmDataViewer;
import eu.etaxonomy.taxeditor.view.detail.DetailsViewPart;
return Status.OK_STATUS;
}
+ public static IStatus executeOperation(final AbstractOperation operation, final RemotingCdmHandler handler) {
+ if (getOperationHistory() == null) {
+ throw new IllegalArgumentException(
+ "There is no operation history for this context");
+ }
+
+ final IAdaptable uiInfoAdapter = WorkspaceUndoUtil
+ .getUIInfoAdapter(getShell());
+
+ IRunnableWithProgress runnable = new IRunnableWithProgress() {
+
+ @Override
+ public void run(IProgressMonitor monitor)
+ throws InvocationTargetException, InterruptedException {
+ String operationlabel = operation.getLabel();
+ monitor.beginTask(operationlabel, 100);
+ IStatus status = Status.CANCEL_STATUS;
+ try {
+ operation.addContext(IOperationHistory.GLOBAL_UNDO_CONTEXT);
+ status = getOperationHistory().execute(operation, monitor,
+ uiInfoAdapter);
+ if(handler != null) {
+ handler.postOperation(status);
+ }
+ } catch (ExecutionException e) {
+ MessagingUtils.operationDialog(this, e, TaxeditorStorePlugin.PLUGIN_ID, operationlabel, null);
+ } finally {
+ monitor.done();
+ }
+
+ String statusString = status.equals(Status.OK_STATUS) ? "completed"
+ : "cancelled";
+ setStatusLine(operationlabel + " " + statusString + ".");
+
+ }
+ };
+
+ try {
+ runInUI(runnable, null);
+ } catch (Exception e) {
+ MessagingUtils.messageDialog("Error executing operation", AbstractUtility.class, "An error occured while executing " + operation.getLabel(), e);
+ }
+
+ return Status.OK_STATUS;
+ }
/**
* <p>
* getOperationHistory
}
+ public static void executeCommand(String commandId, Object source, String pluginId) {
+ IHandlerService handlerService = (IHandlerService) AbstractUtility.getService(IHandlerService.class);
+ Exception exception = null;
+ try {
+ handlerService.executeCommand(commandId, null);
+ } catch (ExecutionException e) {
+ exception = e;
+ } catch (NotDefinedException e) {
+ exception = e;
+ } catch (NotEnabledException e) {
+ exception = e;
+ } catch (NotHandledException e) {
+ exception = e;
+ } finally {
+ if(exception != null) {
+ MessagingUtils.errorDialog("Error executing command",
+ source,
+ "Could not execute command with id " + commandId ,
+ pluginId,
+ exception,
+ true);
+ }
+ }
+ }
}
--- /dev/null
+// $Id$
+/**
+* Copyright (C) 2015 EDIT
+* European Distributed Institute of Taxonomy
+* http://www.e-taxonomy.eu
+*
+* The contents of this file are subject to the Mozilla Public License Version 1.1
+* See LICENSE.TXT at the top of this package for the full license terms.
+*/
+package eu.etaxonomy.taxeditor.model;
+
+
+import org.eclipse.core.runtime.IStatus;
+import org.eclipse.jface.dialogs.ErrorDialog;
+import org.eclipse.jface.dialogs.IDialogConstants;
+import org.eclipse.swt.SWT;
+import org.eclipse.swt.graphics.Point;
+import org.eclipse.swt.widgets.Shell;
+
+
+/**
+ * @author k.luther
+ * @date Oct 7, 2015
+ *
+ */
+public class CdmDeleteErrorDialog extends ErrorDialog {
+
+
+ private static final int DIALOG_MAX_HEIGHT = 500;
+
+ private final String stackTrace;
+
+
+
+ /**
+ * @param parentShell
+ * @param dialogTitle
+ * @param message
+ * @param status
+ * @param stackTrace
+ */
+ public CdmDeleteErrorDialog(Shell parentShell,
+ String dialogTitle,
+ String message,
+ IStatus status,
+ String stackTrace,
+ Object[] updatedObjects) {
+ super(parentShell,
+ dialogTitle,
+ message, status,
+ IStatus.OK| IStatus.INFO | IStatus.WARNING | IStatus.ERROR);
+ this.stackTrace = stackTrace;
+ this.message = message == null ? status.getMessage()
+ : message + "\n " + status.getMessage(); //$NON-NLS-1$
+ }
+
+
+ /* (non-Javadoc)
+ * @see org.eclipse.jface.dialogs.ErrorDialog#buttonPressed(int)
+ */
+ @Override
+ protected void buttonPressed(int id) {
+ super.buttonPressed(id);
+ if (id == IDialogConstants.DETAILS_ID) {
+ Point oldSize = getShell().computeSize(SWT.DEFAULT, SWT.DEFAULT);
+ // set height to max allowed
+ if(getShell().getSize().y > DIALOG_MAX_HEIGHT) {
+ getShell().setSize(getShell().getSize().x, 500);
+ } else {
+ getShell().setSize(getShell().getSize().x, oldSize.y);
+ }
+ }
+
+ }
+
+
+
+
+
+
+
+
+
+}
message, status,
IStatus.OK| IStatus.INFO | IStatus.WARNING | IStatus.ERROR);
this.stackTrace = stackTrace;
+
+
+ }
+
+ /**
+ * @param parentShell
+ * @param dialogTitle
+ * @param message
+ * @param status
+ * @param stackTrace
+ */
+ public CdmErrorDialog(Shell parentShell,
+ String dialogTitle,
+ String message,
+ IStatus status,
+ String stackTrace,
+ Object[] updatedObjects) {
+ this(parentShell, dialogTitle, message, status, stackTrace);
+ this.message = message == null ? status.getMessage()
+ : message + "\n " + status.getMessage(); //$NON-NLS-1$
}
/**
new Transfer[] { TextTransfer.getInstance() });
}
}
+
+
}
--- /dev/null
+// $Id$
+/**
+* Copyright (C) 2015 EDIT
+* European Distributed Institute of Taxonomy
+* http://www.e-taxonomy.eu
+*
+* The contents of this file are subject to the Mozilla Public License Version 1.1
+* See LICENSE.TXT at the top of this package for the full license terms.
+*/
+package eu.etaxonomy.taxeditor.model;
+
+import java.util.ArrayList;
+import java.util.Iterator;
+import java.util.List;
+
+import org.eclipse.core.runtime.IStatus;
+import org.eclipse.core.runtime.Status;
+
+import eu.etaxonomy.cdm.api.service.DeleteResult;
+import eu.etaxonomy.cdm.model.common.CdmBase;
+import eu.etaxonomy.cdm.model.common.IdentifiableEntity;
+
+/**
+ * @author k.luther
+ * @date Oct 5, 2015
+ *
+ */
+public class DeleteResultMessagingUtils extends MessagingUtils {
+ /**
+ * Displays a message {@link org.eclipse.jface.dialogs.MessageDialog}.
+ *
+ * @param title
+ * @param source
+ * @param message
+ */
+ public static void messageDialogWithDetails(DeleteResult result, String message, String pluginId) {
+ if (result.isOk() && result.getExceptions().isEmpty()){
+ return;
+ }
+ List<String> details = new ArrayList<String>();
+ String title= "";
+
+ if (result.getExceptions().size() > 0){
+ for (Exception e:result.getExceptions()){
+ details.add(e.getMessage());
+ }
+ if (result.isOk()){
+ title = "Delete was successfull.";
+ } else {
+ title = "Delete was aborted.";
+ }
+ }
+ StringBuffer relatedObjectsString = new StringBuffer();
+ List<String> relatedObjects = new ArrayList<String>();
+ if (result.getUpdatedObjects().size() > 0){
+ Iterator<CdmBase> objects = result.getRelatedObjects().iterator();
+ while (objects.hasNext()){
+ CdmBase object = objects.next();
+ if (object instanceof IdentifiableEntity){
+ relatedObjects.add("[" + object.getClass().getSimpleName() + "] " +((IdentifiableEntity)object).getTitleCache() );
+ } else{
+ relatedObjects.add(object.getUserFriendlyTypeName());
+ }
+
+ }
+
+ for (String relatedObject: relatedObjects){
+
+ relatedObjectsString.append(relatedObject);
+ relatedObjectsString.append(System.lineSeparator());
+ }
+ }
+ message = message + "\n" ;
+ String stackTraceWithContext = getContextInfo(details);
+ CdmDeleteErrorDialog ced = new CdmDeleteErrorDialog(AbstractUtility.getShell(), title, message,new Status(IStatus.INFO, pluginId, relatedObjectsString.toString(), result.getExceptions().iterator().next()), stackTraceWithContext, result.getUpdatedObjects().toArray());
+
+ ced.open();
+
+
+
+ }
+}
return stackTraceAndContextInfo.toString();
}
+ public static String getContextInfo(List<String> contextInfo) {
+ StringBuffer scontextInfoStringBuffer = new StringBuffer();
+
+
+ for(String infoItem : contextInfo) {
+ scontextInfoStringBuffer.append(infoItem + System.getProperty("line.separator"));
+ }
+
+
+
+ return scontextInfoStringBuffer.toString();
+ }
+
private static Throwable getDefaultThrowable() {
return new Throwable("Error thrown but no associated exception");
}
/** {@inheritDoc} */
@Override
protected void saveEntity() {
- CdmStore.getService(IAmplificationService.class).saveOrUpdate(getEntity());
+ if(CdmStore.getCurrentSessionManager().isRemoting()) {
+ CdmStore.getService(IAmplificationService.class).merge(getEntity(), true);
+ } else {
+ CdmStore.getService(IAmplificationService.class).save(getEntity());
+ }
}
/** {@inheritDoc} */
// $Id$
/**
* Copyright (C) 2007 EDIT
-* European Distributed Institute of Taxonomy
+* European Distributed Institute of Taxonomy
* http://www.e-taxonomy.eu
-*
+*
* The contents of this file are subject to the Mozilla Public License Version 1.1
* See LICENSE.TXT at the top of this package for the full license terms.
*/
package eu.etaxonomy.taxeditor.newWizard;
+import eu.etaxonomy.cdm.api.application.CdmApplicationState;
+import eu.etaxonomy.cdm.api.application.CdmChangeEvent;
+import eu.etaxonomy.cdm.api.application.CdmChangeEvent.Action;
import eu.etaxonomy.cdm.api.service.IClassificationService;
import eu.etaxonomy.cdm.model.taxon.Classification;
import eu.etaxonomy.taxeditor.store.CdmStore;
entity = CdmStore.getService(IClassificationService.class).load(entity.getUuid());
super.setEntity(entity);
}
-
+
@Override
public void addPages() {
classificationWizardPage = new ClassificationWizardPage(formFactory, getConversationHolder(), getEntity());
addPage(classificationWizardPage);
}
-
+
@Override
protected void saveEntity() {
- CdmStore.getService(IClassificationService.class).saveOrUpdate(getEntity());
+ //CdmStore.getService(IClassificationService.class).saveOrUpdate(getEntity());
+ Classification classification = getEntity();
+ if(CdmStore.getCurrentSessionManager().isRemoting()) {
+ CdmStore.getService(IClassificationService.class).merge(getEntity(), true);
+ CdmApplicationState.getCurrentDataChangeService()
+ .fireChangeEvent(new CdmChangeEvent(Action.Create, classification, NewTaxonNodeWizard.class), true);
+ } else {
+ CdmStore.getService(IClassificationService.class).save(getEntity());
+ }
+
}
@Override
// $Id$
/**
* Copyright (C) 2007 EDIT
-* European Distributed Institute of Taxonomy
+* European Distributed Institute of Taxonomy
* http://www.e-taxonomy.eu
-*
+*
* The contents of this file are subject to the Mozilla Public License Version 1.1
* See LICENSE.TXT at the top of this package for the full license terms.
*/
public void addPages() {
addPage(new CollectionWizardPage(formFactory, getConversationHolder(), getEntity()));
}
-
+
/* (non-Javadoc)
* @see eu.etaxonomy.taxeditor.editor.newWizard.AbstractNewEntityWizard#saveEntity()
*/
/** {@inheritDoc} */
@Override
protected void saveEntity() {
- CdmStore.getService(ICollectionService.class).saveOrUpdate(getEntity());
+ if(CdmStore.getCurrentSessionManager().isRemoting()) {
+ CdmStore.getService(ICollectionService.class).merge(getEntity(), true);
+ } else {
+ CdmStore.getService(ICollectionService.class).save(getEntity());
+ }
}
/* (non-Javadoc)
protected String getEntityName() {
return "Collection";
}
-
+
}
// $Id$
/**
-* Copyright (C) 2007 EDIT
-* European Distributed Institute of Taxonomy
-* http://www.e-taxonomy.eu
-*
-* The contents of this file are subject to the Mozilla Public License Version 1.1
-* See LICENSE.TXT at the top of this package for the full license terms.
-*/
+ * Copyright (C) 2007 EDIT
+ * European Distributed Institute of Taxonomy
+ * http://www.e-taxonomy.eu
+ *
+ * The contents of this file are subject to the Mozilla Public License Version 1.1
+ * See LICENSE.TXT at the top of this package for the full license terms.
+ */
package eu.etaxonomy.taxeditor.newWizard;
+import java.util.HashMap;
+import java.util.Map;
+import java.util.UUID;
+
+import org.eclipse.core.commands.Command;
+import org.eclipse.core.commands.ExecutionException;
+import org.eclipse.core.commands.NotEnabledException;
+import org.eclipse.core.commands.NotHandledException;
+import org.eclipse.core.commands.ParameterizedCommand;
+import org.eclipse.core.commands.common.NotDefinedException;
+import org.eclipse.jface.dialogs.IDialogConstants;
+import org.eclipse.jface.dialogs.MessageDialogWithToggle;
+import org.eclipse.ui.IWorkbenchWindow;
+import org.eclipse.ui.PlatformUI;
+import org.eclipse.ui.commands.ICommandService;
+import org.eclipse.ui.handlers.IHandlerService;
+
import eu.etaxonomy.cdm.api.facade.DerivedUnitFacade;
import eu.etaxonomy.cdm.api.facade.DerivedUnitFacadeNotSupportedException;
import eu.etaxonomy.cdm.api.service.IOccurrenceService;
import eu.etaxonomy.cdm.model.occurrence.MediaSpecimen;
import eu.etaxonomy.cdm.model.occurrence.SpecimenOrObservationBase;
import eu.etaxonomy.cdm.model.occurrence.SpecimenOrObservationType;
+import eu.etaxonomy.taxeditor.model.AbstractUtility;
import eu.etaxonomy.taxeditor.model.IDerivedUnitFacadePart;
+import eu.etaxonomy.taxeditor.model.MessagingUtils;
+import eu.etaxonomy.taxeditor.preference.IPreferenceKeys;
import eu.etaxonomy.taxeditor.preference.PreferencesUtil;
import eu.etaxonomy.taxeditor.store.CdmStore;
import eu.etaxonomy.taxeditor.ui.section.occurrence.DerivedUnitBaseWizardPage;
import eu.etaxonomy.taxeditor.ui.section.occurrence.FieldUnitGeneralWizardPage;
import eu.etaxonomy.taxeditor.ui.section.occurrence.FieldUnitWizardPage;
import eu.etaxonomy.taxeditor.ui.section.occurrence.GatheringEventWizardPage;
+import eu.etaxonomy.taxeditor.view.derivateSearch.DerivateSearchCompositeController;
/**
- * <p>NewDerivedUnitBaseWizard class.</p>
- *
* @author n.hoffmann
* @created Jun 16, 2010
* @version 1.0
*/
public class NewDerivedUnitBaseWizard extends AbstractNewEntityWizard<SpecimenOrObservationBase> implements IDerivedUnitFacadePart{
- private SpecimenOrObservationType specOrObsType = null;
+ private SpecimenOrObservationType specOrObsType = null;
- public NewDerivedUnitBaseWizard() {
- super();
- }
+ public NewDerivedUnitBaseWizard() {
+ super();
+ }
- public NewDerivedUnitBaseWizard(SpecimenOrObservationType specOrObsType) {
- super();
- this.specOrObsType = specOrObsType;
- }
- /** {@inheritDoc} */
- @Override
- public void addPages() {
- DerivedUnitFacade facade = null;
- try {
- if(getEntity() instanceof DerivedUnit) {
- facade = DerivedUnitFacade.NewInstance((DerivedUnit)getEntity(), PreferencesUtil.getDerivedUnitConfigurator());
- addPage(new DerivedUnitGeneralWizardPage(formFactory, getConversationHolder(), facade));
- addPage(new GatheringEventWizardPage(formFactory, getConversationHolder(), facade));
- addPage(new FieldUnitWizardPage(formFactory, getConversationHolder(), facade));
- addPage(new DerivedUnitBaseWizardPage(formFactory, getConversationHolder(), facade));
- }
- else if(getEntity() instanceof FieldUnit){
- facade = DerivedUnitFacade.NewInstance(SpecimenOrObservationType.FieldUnit, (FieldUnit)getEntity(), PreferencesUtil.getDerivedUnitConfigurator());
- addPage(new FieldUnitGeneralWizardPage(formFactory, getConversationHolder(), facade));
- addPage(new GatheringEventWizardPage(formFactory, getConversationHolder(), facade));
- addPage(new FieldUnitWizardPage(formFactory, getConversationHolder(), facade));
- }
- } catch (DerivedUnitFacadeNotSupportedException e) {
- // we should never get here
- throw new IllegalStateException();
- }
- }
+ public NewDerivedUnitBaseWizard(SpecimenOrObservationType specOrObsType) {
+ super();
+ this.specOrObsType = specOrObsType;
+ }
+ /** {@inheritDoc} */
+ @Override
+ public void addPages() {
+ DerivedUnitFacade facade = null;
+ try {
+ if(getEntity() instanceof DerivedUnit) {
+ facade = DerivedUnitFacade.NewInstance((DerivedUnit)getEntity(), PreferencesUtil.getDerivedUnitConfigurator());
+ addPage(new DerivedUnitGeneralWizardPage(formFactory, getConversationHolder(), facade));
+ addPage(new GatheringEventWizardPage(formFactory, getConversationHolder(), facade));
+ addPage(new FieldUnitWizardPage(formFactory, getConversationHolder(), facade));
+ addPage(new DerivedUnitBaseWizardPage(formFactory, getConversationHolder(), facade));
+ }
+ else if(getEntity() instanceof FieldUnit){
+ facade = DerivedUnitFacade.NewInstance(SpecimenOrObservationType.FieldUnit, (FieldUnit)getEntity(), PreferencesUtil.getDerivedUnitConfigurator());
+ addPage(new FieldUnitGeneralWizardPage(formFactory, getConversationHolder(), facade));
+ addPage(new GatheringEventWizardPage(formFactory, getConversationHolder(), facade));
+ addPage(new FieldUnitWizardPage(formFactory, getConversationHolder(), facade));
+ }
+ } catch (DerivedUnitFacadeNotSupportedException e) {
+ // we should never get here
+ throw new IllegalStateException();
+ }
+ }
- /*
- * (non-Javadoc)
- *
- * @see eu.etaxonomy.taxeditor.editor.newWizard.AbstractNewEntityWizard#
- * createNewEntity()
- */
/** {@inheritDoc} */
@Override
protected SpecimenOrObservationBase createNewEntity() {
} else {
if (SpecimenOrObservationType.Media.equals(specOrObsType)
|| ((specOrObsType.getKindOf() != null) && specOrObsType.getKindOf().equals(SpecimenOrObservationType.Media))) {
- MediaSpecimen mediaSpecimen = MediaSpecimen.NewInstance(specOrObsType);
- //a MediaSpecimen with no media attached does not make sense. Hence, we add one
+ MediaSpecimen mediaSpecimen = MediaSpecimen.NewInstance(specOrObsType);
+ //a MediaSpecimen with no media attached does not make sense. Hence, we add one
mediaSpecimen.setMediaSpecimen(Media.NewInstance());
return mediaSpecimen;
} else if (specOrObsType.equals(SpecimenOrObservationType.FieldUnit)) {
}
}
- /* (non-Javadoc)
- * @see eu.etaxonomy.taxeditor.editor.newWizard.AbstractNewEntityWizard#saveEntity()
- */
+
/** {@inheritDoc} */
@Override
protected void saveEntity() {
- CdmStore.getService(IOccurrenceService.class).saveOrUpdate(getEntity());
+ if(CdmStore.getCurrentSessionManager().isRemoting()) {
+ CdmStore.getService(IOccurrenceService.class).merge(getEntity(), true);
+ } else {
+ CdmStore.getService(IOccurrenceService.class).save(getEntity());
+ }
}
- @Override
- protected String getEntityName() {
- return "Specimen";
- }
+
+ @Override
+ protected String getEntityName() {
+ return "Specimen";
+ }
+
+ /**
+ * {@inheritDoc}
+ */
+ @Override
+ public boolean performFinish() {
+ boolean performFinish = super.performFinish();
+ int returnCode = IDialogConstants.NO_ID;
+ if (!PreferencesUtil.getPreferenceStore().getBoolean(IPreferenceKeys.PROMPT_FOR_OPEN_SPECIMEN_IN_EDITOR)){
+ MessageDialogWithToggle messageDialog = MessageDialogWithToggle.openYesNoQuestion(getShell(),
+ "Choose opening option", "Do you want to open the specimen in the specimen editor?",
+ "Remember my decision?", false, PreferencesUtil.getPreferenceStore(),
+ IPreferenceKeys.ALWAYS_OPEN_SPECIMEN_IN_EDITOR);
+ returnCode = messageDialog.getReturnCode();
+ PreferencesUtil.getPreferenceStore().setValue(IPreferenceKeys.PROMPT_FOR_OPEN_SPECIMEN_IN_EDITOR, messageDialog.getToggleState());
+ if (returnCode != IDialogConstants.YES_ID) {
+ return performFinish;
+ }
+ }
+ if (returnCode==IDialogConstants.YES_ID ||
+ PreferencesUtil.getPreferenceStore().getString(IPreferenceKeys.ALWAYS_OPEN_SPECIMEN_IN_EDITOR)
+ .equals(MessageDialogWithToggle.ALWAYS)) {
+ IHandlerService handlerService = (IHandlerService) AbstractUtility.getService(IHandlerService.class);
+
+ // get the command from plugin.xml
+ IWorkbenchWindow window = PlatformUI.getWorkbench().getActiveWorkbenchWindow();
+ ICommandService cmdService = (ICommandService) window.getService(ICommandService.class);
+ Command command = cmdService.getCommand("eu.etaxonomy.taxeditor.editor.openSpecimenEditor");
+ Map<String, UUID> parameters = new HashMap<String, UUID>();
+ parameters.put("eu.etaxonomy.taxeditor.specimenUuidParameter", getEntity().getUuid());
+ ParameterizedCommand parameterizedCommand = ParameterizedCommand.generateCommand(command, parameters);
+
+
+ // execute the command
+ try {
+ handlerService.executeCommand(parameterizedCommand, null);
+ } catch (ExecutionException e) {
+ MessagingUtils.error(DerivateSearchCompositeController.class, e);
+ } catch (NotDefinedException e) {
+ MessagingUtils.error(DerivateSearchCompositeController.class, e);
+ } catch (NotEnabledException e) {
+ MessagingUtils.error(DerivateSearchCompositeController.class, e);
+ } catch (NotHandledException e) {
+ MessagingUtils.error(DerivateSearchCompositeController.class, e);
+ }
+ }
+ return performFinish;
+ }
}
// $Id$
/**
* Copyright (C) 2007 EDIT
-* European Distributed Institute of Taxonomy
+* European Distributed Institute of Taxonomy
* http://www.e-taxonomy.eu
-*
+*
* The contents of this file are subject to the Mozilla Public License Version 1.1
* See LICENSE.TXT at the top of this package for the full license terms.
*/
/** {@inheritDoc} */
@Override
protected void saveEntity() {
- CdmStore.getService(IOccurrenceService.class).saveOrUpdate(getEntity());
+ if(CdmStore.getCurrentSessionManager().isRemoting()) {
+ CdmStore.getService(IOccurrenceService.class).merge(getEntity(), true);
+ } else {
+ CdmStore.getService(IOccurrenceService.class).save(getEntity());
+ }
}
@Override
// $Id$
/**
* Copyright (C) 2007 EDIT
-* European Distributed Institute of Taxonomy
+* European Distributed Institute of Taxonomy
* http://www.e-taxonomy.eu
-*
+*
* The contents of this file are subject to the Mozilla Public License Version 1.1
* See LICENSE.TXT at the top of this package for the full license terms.
*/
* @created Sept 13 2012
*/
public class NewGrantedAuthorityWizard extends AbstractNewEntityWizard<GrantedAuthorityImpl> {
-
+
private GrantedAuthorityDetailWizardPage authorityPage;
-
+
/* (non-Javadoc)
* @see org.eclipse.jface.wizard.Wizard#addPages()
*/
*/
@Override
protected void saveEntity() {
- CdmStore.getService(IGrantedAuthorityService.class).saveOrUpdate(getEntity());
+ if(CdmStore.getCurrentSessionManager().isRemoting()) {
+ CdmStore.getService(IGrantedAuthorityService.class).merge(getEntity(), true);
+ } else {
+ CdmStore.getService(IGrantedAuthorityService.class).save(getEntity());
+ }
}
/* (non-Javadoc)
// $Id$
/**
* Copyright (C) 2007 EDIT
-* European Distributed Institute of Taxonomy
+* European Distributed Institute of Taxonomy
* http://www.e-taxonomy.eu
-*
+*
* The contents of this file are subject to the Mozilla Public License Version 1.1
* See LICENSE.TXT at the top of this package for the full license terms.
*/
public class NewGroupWizard extends AbstractNewEntityWizard<Group> {
private GroupDetailWizardPage groupPage;
-
+
/* (non-Javadoc)
* @see org.eclipse.jface.wizard.Wizard#addPages()
*/
groupPage = new GroupDetailWizardPage(formFactory, getConversationHolder(), getEntity());
super.addPage(groupPage);
}
-
+
/* (non-Javadoc)
* @see eu.etaxonomy.taxeditor.newWizard.AbstractNewEntityWizard#saveEntity()
*/
@Override
protected void saveEntity() {
- CdmStore.getService(IGroupService.class).saveOrUpdate(getEntity());
+ if(CdmStore.getCurrentSessionManager().isRemoting()) {
+ CdmStore.getService(IGroupService.class).merge(getEntity(), true);
+ } else {
+ CdmStore.getService(IGroupService.class).save(getEntity());
+ }
}
/* (non-Javadoc)
// $Id$
/**
* Copyright (C) 2007 EDIT
-* European Distributed Institute of Taxonomy
+* European Distributed Institute of Taxonomy
* http://www.e-taxonomy.eu
-*
+*
* The contents of this file are subject to the Mozilla Public License Version 1.1
* See LICENSE.TXT at the top of this package for the full license terms.
*/
public void addPages() {
addPage(new InstitutionWizardPage(formFactory, getConversationHolder(), getEntity()));
}
-
+
/* (non-Javadoc)
* @see eu.etaxonomy.taxeditor.editor.newWizard.AbstractNewEntityWizard#saveEntity()
*/
@Override
protected void saveEntity() {
- CdmStore.getService(IAgentService.class).saveOrUpdate(getEntity());
+ if(CdmStore.getCurrentSessionManager().isRemoting()) {
+ CdmStore.getService(IAgentService.class).merge(getEntity(), true);
+ } else {
+ CdmStore.getService(IAgentService.class).save(getEntity());
+ }
}
/* (non-Javadoc)
// $Id$
/**
* Copyright (C) 2007 EDIT
-* European Distributed Institute of Taxonomy
+* European Distributed Institute of Taxonomy
* http://www.e-taxonomy.eu
-*
+*
* The contents of this file are subject to the Mozilla Public License Version 1.1
* See LICENSE.TXT at the top of this package for the full license terms.
*/
public void addPages() {
addPage(new NonViralNameWizardPage(formFactory, getConversationHolder(), getEntity()));
}
-
+
/** {@inheritDoc} */
@Override
protected NonViralName createNewEntity() {
/** {@inheritDoc} */
@Override
protected void saveEntity() {
- CdmStore.getService(INameService.class).saveOrUpdate(getEntity());
+ if(CdmStore.getCurrentSessionManager().isRemoting()) {
+ CdmStore.getService(INameService.class).merge(getEntity(), true);
+ } else {
+ CdmStore.getService(INameService.class).save(getEntity());
+ }
}
@Override
// $Id$
/**
* Copyright (C) 2007 EDIT
-* European Distributed Institute of Taxonomy
+* European Distributed Institute of Taxonomy
* http://www.e-taxonomy.eu
-*
+*
* The contents of this file are subject to the Mozilla Public License Version 1.1
* See LICENSE.TXT at the top of this package for the full license terms.
*/
public void addPages() {
addPage(new PersonWizardPage(formFactory, getConversationHolder(), getEntity()));
}
-
+
/** {@inheritDoc} */
@Override
protected Person createNewEntity() {
/** {@inheritDoc} */
@Override
protected void saveEntity() {
- CdmStore.getService(IAgentService.class).saveOrUpdate(getEntity());
+ if(CdmStore.getCurrentSessionManager().isRemoting()) {
+ CdmStore.getService(IAgentService.class).merge(getEntity(), true);
+ } else {
+ CdmStore.getService(IAgentService.class).save(getEntity());
+ }
}
@Override
/**
- *
+ *
*/
package eu.etaxonomy.taxeditor.newWizard;
public class NewPolytomousKeyWizard extends AbstractNewEntityWizard<PolytomousKey> {
private PolytomousKeyWizardPage polytomousKeyPage;
-
+
@Override
public void addPages() {
polytomousKeyPage = new PolytomousKeyWizardPage(formFactory, getConversationHolder(), getEntity());
super.addPage(polytomousKeyPage);
}
-
+
public String getPolytomousKeyName() {
return polytomousKeyPage.getPolytomousKeyName();
}
-
+
/* (non-Javadoc)
* @see eu.etaxonomy.taxeditor.editor.newWizard.AbstractNewEntityWizard#saveEntity()
*/
@Override
protected void saveEntity() {
if(!polytomousKeyPage.getPolytomousKeyName().equals("")) {
- CdmStore.getService(IPolytomousKeyService.class).saveOrUpdate(getEntity());
+ if(CdmStore.getCurrentSessionManager().isRemoting()) {
+ CdmStore.getService(IPolytomousKeyService.class).merge(getEntity(), true);
+ } else {
+ CdmStore.getService(IPolytomousKeyService.class).save(getEntity());
+ }
}
}
/** {@inheritDoc} */
@Override
protected void saveEntity() {
- CdmStore.getService(IPrimerService.class).saveOrUpdate(getEntity());
+ if(CdmStore.getCurrentSessionManager().isRemoting()) {
+ CdmStore.getService(IPrimerService.class).merge(getEntity(),true);
+ } else {
+ CdmStore.getService(IPrimerService.class).save(getEntity());
+ }
}
/** {@inheritDoc} */
// $Id$
/**
* Copyright (C) 2007 EDIT
-* European Distributed Institute of Taxonomy
+* European Distributed Institute of Taxonomy
* http://www.e-taxonomy.eu
-*
+*
* The contents of this file are subject to the Mozilla Public License Version 1.1
* See LICENSE.TXT at the top of this package for the full license terms.
*/
* @version 1.0
*/
public class NewReferenceWizard extends AbstractNewEntityWizard<Reference> {
-
+
private ReferenceWizardPage referencePage;
-
+
/** {@inheritDoc} */
@Override
public void addPages() {
/** {@inheritDoc} */
@Override
protected void saveEntity() {
- CdmStore.getService(IReferenceService.class).saveOrUpdate(getEntity());
+ CdmStore.getService(IReferenceService.class).save(getEntity());
}
/** {@inheritDoc} */
*/
package eu.etaxonomy.taxeditor.newWizard;
+import java.util.HashSet;
+import java.util.Set;
import java.util.UUID;
import org.apache.commons.lang.StringUtils;
+import eu.etaxonomy.cdm.api.application.CdmApplicationState;
+import eu.etaxonomy.cdm.api.application.CdmChangeEvent;
+import eu.etaxonomy.cdm.api.application.CdmChangeEvent.Action;
import eu.etaxonomy.cdm.api.service.IClassificationService;
import eu.etaxonomy.cdm.api.service.ITaxonNodeService;
+import eu.etaxonomy.cdm.model.common.CdmBase;
import eu.etaxonomy.cdm.model.taxon.Classification;
import eu.etaxonomy.cdm.model.taxon.ITaxonTreeNode;
import eu.etaxonomy.cdm.model.taxon.Taxon;
*/
public class NewTaxonNodeWizard extends AbstractNewEntityWizard<ITaxonTreeNode>{
- private TaxonNodeWizardPage taxonNodePage;
- private boolean openEmptyEditor;
- private UUID generatedTaxonNodeUuid;
+ private TaxonNodeWizardPage taxonNodePage;
+ private boolean openEmptyEditor;
+ private UUID generatedTaxonNodeUuid;
private IWizardPageListener wizardPageListener;
- @Override
- public void addPages() {
- taxonNodePage = new TaxonNodeWizardPage(formFactory, getConversationHolder(), getEntity(), wizardPageListener);
- addPage(taxonNodePage);
- }
-
- @Override
- protected void saveEntity() {
- if(taxonNodePage.getTaxon() == null || StringUtils.isEmpty(taxonNodePage.getTaxon().getName().getFullTitleCache())){
- openEmptyEditor = true;
- }else{
- getConversationHolder().bind();
- ITaxonTreeNode parent = getParentTreeNode();
- Taxon taxon = taxonNodePage.getTaxon();
- try{
- TaxonNode taxonNode = parent.addChildTaxon(taxon, parent.getReference(), parent.getMicroReference());
- generatedTaxonNodeUuid = CdmStore.getService(ITaxonNodeService.class).saveOrUpdate(taxonNode);
- }catch(IllegalArgumentException e){
- MessagingUtils.warningDialog("Taxon already exists in classfication", getClass(), e.getMessage());
- }
- }
- }
-
- @Override
- protected ITaxonTreeNode createNewEntity() {
- if(getSelection() != null){
- Object selectedObject = getSelection().getFirstElement();
- if(selectedObject instanceof ITaxonTreeNode){
- ITaxonTreeNode treeNode = (ITaxonTreeNode) selectedObject;
-
- if(treeNode instanceof Classification){
- return CdmStore.getService(IClassificationService.class).load(treeNode.getUuid());
- }
- else if(treeNode instanceof TaxonNode){
- return CdmStore.getService(ITaxonNodeService.class).load(treeNode.getUuid());
- }
- }
- }
-
- return null;
- }
-
- /**
- * <p>openInEditor</p>
- *
- * @return a boolean.
- */
- public boolean openInEditor(){
- return taxonNodePage.openInEditor();
- }
-
- /**
- * <p>openEmpty</p>
- *
- * @return a boolean.
- */
- public boolean openEmpty(){
- return openInEditor() && openEmptyEditor;
- }
-
- /**
- * <p>getTaxonNode</p>
- *
- * @return a {@link eu.etaxonomy.cdm.model.taxon.TaxonNode} object.
- */
- public TaxonNode getTaxonNode(){
- if(generatedTaxonNodeUuid != null){
- return CdmStore.getService(ITaxonNodeService.class).load(generatedTaxonNodeUuid);
- }
- return null;
- }
-
- public ITaxonTreeNode getParentTreeNode(){
- return taxonNodePage.getParentTreeNode();
- }
-
- @Override
- protected String getEntityName() {
- return "Taxon";
- }
-
- public void addWizardPageListener(IWizardPageListener wizardPageListener){
- this.wizardPageListener = wizardPageListener;
- }
+ @Override
+ public void addPages() {
+ taxonNodePage = new TaxonNodeWizardPage(formFactory, getConversationHolder(), getEntity(), wizardPageListener);
+ addPage(taxonNodePage);
+ }
+
+ @Override
+ protected void saveEntity() {
+ if(taxonNodePage.getTaxon() == null || StringUtils.isEmpty(taxonNodePage.getTaxon().getName().getFullTitleCache())){
+ openEmptyEditor = true;
+ }else{
+ getConversationHolder().bind();
+ ITaxonTreeNode parent = getParentTreeNode();
+ Taxon taxon = taxonNodePage.getTaxon();
+ try{
+ TaxonNode taxonNode = parent.addChildTaxon(taxon, parent.getReference(), parent.getMicroReference());
+
+ if(CdmStore.getCurrentSessionManager().isRemoting()) {
+ taxonNode = CdmStore.getService(ITaxonNodeService.class).merge(taxonNode);
+ } else {
+ taxonNode = CdmStore.getService(ITaxonNodeService.class).save(taxonNode);
+ }
+ generatedTaxonNodeUuid = taxonNode.getUuid();
+
+ Set<CdmBase> affectedObjects = new HashSet<CdmBase>();
+ //FIXME:Remoting Hack for now - need to generalise this
+ // by making the affected objects a set of ICdmBase
+ // Also, this needs to be moved to the new operations
+ // architecture.
+
+ TaxonNode parentNode = taxonNode.getParent();
+ if(parentNode.getParent() == null) {
+ affectedObjects.add(taxonNode.getClassification());
+ }
+
+ if(parentNode instanceof TaxonNode) {
+ affectedObjects.add(parentNode);
+ }
+
+ if(CdmStore.getCurrentSessionManager().isRemoting()) {
+ CdmApplicationState.getCurrentDataChangeService()
+ .fireChangeEvent(new CdmChangeEvent(Action.Create, affectedObjects, NewTaxonNodeWizard.class), true);
+ }
+ }catch(IllegalArgumentException e){
+ MessagingUtils.warningDialog("Taxon already exists in classfication", getClass(), e.getMessage());
+ }
+ }
+ }
+
+ @Override
+ protected ITaxonTreeNode createNewEntity() {
+ if(getSelection() != null){
+ Object selectedObject = getSelection().getFirstElement();
+ if(selectedObject instanceof ITaxonTreeNode){
+ ITaxonTreeNode treeNode = (ITaxonTreeNode) selectedObject;
+
+ if(treeNode instanceof Classification){
+ return CdmStore.getService(IClassificationService.class).load(treeNode.getUuid());
+ }
+ else if(treeNode instanceof TaxonNode){
+ return CdmStore.getService(ITaxonNodeService.class).load(treeNode.getUuid());
+ }
+ }
+ }
+
+ return null;
+ }
+
+ /**
+ * <p>openInEditor</p>
+ *
+ * @return a boolean.
+ */
+ public boolean openInEditor(){
+ return taxonNodePage.openInEditor();
+ }
+
+ /**
+ * <p>openEmpty</p>
+ *
+ * @return a boolean.
+ */
+ public boolean openEmpty(){
+ return openInEditor() && openEmptyEditor;
+ }
+
+ /**
+ * <p>getTaxonNode</p>
+ *
+ * @return a {@link eu.etaxonomy.cdm.model.taxon.TaxonNode} object.
+ */
+ public TaxonNode getTaxonNode(){
+ if(generatedTaxonNodeUuid != null){
+ return CdmStore.getService(ITaxonNodeService.class).load(generatedTaxonNodeUuid);
+ }
+ return null;
+ }
+
+ public ITaxonTreeNode getParentTreeNode(){
+ return taxonNodePage.getParentTreeNode();
+ }
+
+ @Override
+ protected String getEntityName() {
+ return "Taxon";
+ }
+
+ public void addWizardPageListener(IWizardPageListener wizardPageListener){
+ this.wizardPageListener = wizardPageListener;
+ }
}
\ No newline at end of file
// $Id$
/**
* Copyright (C) 2007 EDIT
-* European Distributed Institute of Taxonomy
+* European Distributed Institute of Taxonomy
* http://www.e-taxonomy.eu
-*
+*
* The contents of this file are subject to the Mozilla Public License Version 1.1
* See LICENSE.TXT at the top of this package for the full license terms.
*/
public void addPages() {
addPage(new TeamWizardPage(formFactory, getConversationHolder(), getEntity()));
}
-
+
/* (non-Javadoc)
* @see eu.etaxonomy.taxeditor.editor.newWizard.AbstractNewEntityWizard#createNewEntity()
*/
/** {@inheritDoc} */
@Override
protected void saveEntity() {
- CdmStore.getService(IAgentService.class).saveOrUpdate(getEntity());
+ if(CdmStore.getCurrentSessionManager().isRemoting()) {
+ CdmStore.getService(IAgentService.class).merge(getEntity(), true);
+ } else {
+ CdmStore.getService(IAgentService.class).save(getEntity());
+ }
}
@Override
/**
- *
+ *
*/
package eu.etaxonomy.taxeditor.newWizard;
public class NewUserWizard extends AbstractNewEntityWizard<User> {
private UserDetailWizardPage userPage;
-
+
@Override
public void addPages() {
userPage = new UserDetailWizardPage(formFactory, getConversationHolder(), getEntity());
addPage(userPage);
}
-
+
@Override
protected void saveEntity() {
- CdmStore.getService(IUserService.class).saveOrUpdate(getEntity());
+ if(CdmStore.getCurrentSessionManager().isRemoting()) {
+ CdmStore.getService(IUserService.class).merge(getEntity(), true);
+ } else {
+ CdmStore.getService(IUserService.class).save(getEntity());
+ }
}
@Override
import eu.etaxonomy.cdm.model.common.CdmBase;
import eu.etaxonomy.cdm.model.taxon.ITaxonTreeNode;
import eu.etaxonomy.cdm.model.taxon.TaxonNode;
+import eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled;
/**
* Superclass for all operation that have to be committed imediately after execution.
* @version 1.0
*/
public abstract class AbstractPersistentPostOperation extends AbstractPostTaxonOperation {
- private IConversationEnabled conversationEnabled;
+ private final IConversationEnabled conversationEnabled;
protected ITaxonTreeNode parentNode;
+ /**
+ * <p>Constructor for AbstractPersistentPostOperation.</p>
+ *
+ * @param label a {@link java.lang.String} object.
+ * @param undoContext a {@link org.eclipse.core.commands.operations.IUndoContext} object.
+ * @param postOperationEnabled a {@link eu.etaxonomy.taxeditor.operation.IPostOperationEnabled} object.
+ * @param conversationEnabled a {@link eu.etaxonomy.cdm.api.conversation.IConversationEnabled} object.
+ */
+ protected AbstractPersistentPostOperation(String label, IUndoContext undoContext,
+ IPostOperationEnabled postOperationEnabled,
+ IConversationEnabled conversationEnabled) {
+ this(label, undoContext, postOperationEnabled, conversationEnabled, null);
+ }
+
/**
* <p>Constructor for AbstractPersistentPostOperation.</p>
*
*/
protected AbstractPersistentPostOperation(String label, IUndoContext undoContext,
IPostOperationEnabled postOperationEnabled,
- IConversationEnabled conversationEnabled) {
- super(label, undoContext, postOperationEnabled);
+ IConversationEnabled conversationEnabled,
+ ICdmEntitySessionEnabled cdmEntitySessionEnabled) {
+ super(label, undoContext, postOperationEnabled, cdmEntitySessionEnabled);
this.conversationEnabled = conversationEnabled;
}
public AbstractPersistentPostOperation(String label,
IUndoContext undoContext, TaxonNode taxonNode,
IPostOperationEnabled postOperationEnabled,
- IConversationEnabled conversationEnabled) {
- super(label, undoContext, taxonNode, postOperationEnabled);
+ IConversationEnabled conversationEnabled,
+ ICdmEntitySessionEnabled cdmEntitySessionEnabled) {
+ super(label, undoContext, taxonNode, postOperationEnabled, cdmEntitySessionEnabled);
this.conversationEnabled = conversationEnabled;
+
}
/**
public AbstractPersistentPostOperation(String label,
IUndoContext undoContext, ITaxonTreeNode parentNode,
IPostOperationEnabled postOperationEnabled,
- IConversationEnabled conversationEnabled) {
- super(label, undoContext, postOperationEnabled);
+ IConversationEnabled conversationEnabled,
+ ICdmEntitySessionEnabled cdmEntitySessionEnabled) {
+ super(label, undoContext, postOperationEnabled, cdmEntitySessionEnabled);
this.parentNode = parentNode;
this.conversationEnabled = conversationEnabled;
+
}
/* (non-Javadoc)
protected IStatus postExecute(CdmBase objectAffectedByOperation) {
Assert.isNotNull(conversationEnabled, "Operation has to have a valid conversation attached.");
-
+
if (!conversationEnabled.getConversationHolder().isClosed()){
conversationEnabled.getConversationHolder().bind();
conversationEnabled.getConversationHolder().commit(true);
*/
public void bind(){
conversationEnabled.getConversationHolder().bind();
+ if(getCdmEntitySessionEnabled() != null) {
+ getCdmEntitySessionEnabled().getCdmEntitySession().bind();
+ }
}
}
import eu.etaxonomy.cdm.model.common.CdmBase;
import eu.etaxonomy.cdm.model.common.ICdmBase;
+import eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled;
/**
* @author pplitzner
*/
protected IPostOperationEnabled postOperationEnabled;
+ private ICdmEntitySessionEnabled cdmEntitySessionEnabled;
+
/**
* <p>Constructor for AbstractPostOperation.</p>
this.postOperationEnabled = postOperationEnabled;
}
+ public AbstractPostOperation(String label, IUndoContext undoContext,
+ T element, IPostOperationEnabled postOperationEnabled,
+ ICdmEntitySessionEnabled cdmEntitySessionEnabled) {
+ this(label, undoContext);
+ this.element = element;
+ this.postOperationEnabled = postOperationEnabled;
+ this.cdmEntitySessionEnabled = cdmEntitySessionEnabled;
+ }
+
/**
* This method will try to call the post operation on a possibly registered
* IPostOperationEnabled implementor. Objects that were affected by the operation
* @return a {@link org.eclipse.core.runtime.IStatus} object.
*/
protected IStatus postExecute(CdmBase objectAffectedByOperation) {
- if(postOperationEnabled != null){
- return postOperationEnabled.postOperation(objectAffectedByOperation) ? Status.OK_STATUS : Status.CANCEL_STATUS;
- }
- return Status.OK_STATUS;
+
+ if(postOperationEnabled != null){
+ return postOperationEnabled.postOperation(objectAffectedByOperation) ? Status.OK_STATUS : Status.CANCEL_STATUS;
+ }
+ return Status.OK_STATUS;
}
/**
* @return a {@link eu.etaxonomy.taxeditor.operation.IPostOperationEnabled} object.
*/
public IPostOperationEnabled getPostOperationEnabled() {
- return postOperationEnabled;
+ return postOperationEnabled;
+ }
+
+// protected IStatus updateSession(CdmBase clientObjectAffectedByOperation, UpdateResult updateResult) {
+// Set<CdmBase> affectedObjects;
+// if(updateResult == null) {
+// affectedObjects = new HashSet<CdmBase>();
+// } else {
+// affectedObjects = updateResult.getUpdatedObjects();
+// }
+//
+// if(cdmEntitySessionEnabled != null) {
+// cdmEntitySessionEnabled.getCdmEntitySession().update(clientObjectAffectedByOperation, affectedObjects);
+// }
+// return Status.OK_STATUS;
+// }
+//
+// protected IStatus updateSession(UUID uuid) {
+//
+// if(cdmEntitySessionEnabled != null) {
+// CdmBase cdmBase = cdmEntitySessionEnabled.getCdmEntitySession().remoteLoad(CdmStore.getService(IService.class),uuid);
+// cdmEntitySessionEnabled.getCdmEntitySession().update(null, cdmBase);
+// }
+// return Status.OK_STATUS;
+// }
+
+ public ICdmEntitySessionEnabled getCdmEntitySessionEnabled() {
+ return cdmEntitySessionEnabled;
}
}
\ No newline at end of file
/**
-* Copyright (C) 2007 EDIT
-* European Distributed Institute of Taxonomy
-* http://www.e-taxonomy.eu
-*
-* The contents of this file are subject to the Mozilla Public License Version 1.1
-* See LICENSE.TXT at the top of this package for the full license terms.
-*/
+ * Copyright (C) 2007 EDIT
+ * European Distributed Institute of Taxonomy
+ * http://www.e-taxonomy.eu
+ *
+ * The contents of this file are subject to the Mozilla Public License Version 1.1
+ * See LICENSE.TXT at the top of this package for the full license terms.
+ */
package eu.etaxonomy.taxeditor.operation;
import eu.etaxonomy.cdm.model.taxon.ITaxonTreeNode;
import eu.etaxonomy.cdm.model.taxon.Taxon;
import eu.etaxonomy.cdm.model.taxon.TaxonNode;
+import eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled;
/**
* <p>Abstract AbstractPostOperation class.</p>
*/
public abstract class AbstractPostTaxonOperation extends AbstractPostOperation<Taxon> {
- /**
- * A reference to the taxons TaxonNode
- */
- protected ITaxonTreeNode taxonNode;
-
- protected UUID parentNodeUuid;
-
-
- /**
- * <p>Constructor for AbstractPostOperation.</p>
- *
- * @param label a {@link java.lang.String} object.
- * @param undoContext a {@link org.eclipse.core.commands.operations.IUndoContext} object.
- * @param taxon a {@link eu.etaxonomy.cdm.model.taxon.Taxon} object.
- * @param postOperationEnabled a {@link eu.etaxonomy.taxeditor.operation.IPostOperationEnabled} object.
- */
- public AbstractPostTaxonOperation(String label, IUndoContext undoContext,
- Taxon taxon, IPostOperationEnabled postOperationEnabled) {
- super(label, undoContext, taxon, postOperationEnabled);
- }
-
- /**
- * <p>Constructor for AbstractPostOperation.</p>
- *
- * @param label a {@link java.lang.String} object.
- * @param undoContext a {@link org.eclipse.core.commands.operations.IUndoContext} object.
- * @param taxonNode a {@link eu.etaxonomy.cdm.model.taxon.TaxonNode} object.
- * @param postOperationEnabled a {@link eu.etaxonomy.taxeditor.operation.IPostOperationEnabled} object.
- */
- public AbstractPostTaxonOperation(String label, IUndoContext undoContext, TaxonNode taxonNode, IPostOperationEnabled postOperationEnabled){
- this(label, undoContext, taxonNode.getTaxon(), postOperationEnabled);
- this.taxonNode = taxonNode;
- }
-
- /**
- * <p>Constructor for AbstractPostOperation.</p>
- *
- * @param label a {@link java.lang.String} object.
- * @param undoContext a {@link org.eclipse.core.commands.operations.IUndoContext} object.
- * @param parentNodeUuid a {@link java.util.UUID} object.
- * @param postOperationEnabled a {@link eu.etaxonomy.taxeditor.operation.IPostOperationEnabled} object.
- */
- public AbstractPostTaxonOperation(String label, IUndoContext undoContext, UUID parentNodeUuid, IPostOperationEnabled postOperationEnabled){
- super(label, undoContext, null, postOperationEnabled);
- this.parentNodeUuid = parentNodeUuid;
- }
-
- /**
- * <p>Constructor for AbstractPostOperation.</p>
- *
- * @param label a {@link java.lang.String} object.
- * @param undoContext a {@link org.eclipse.core.commands.operations.IUndoContext} object.
- * @param postOperationEnabled a {@link eu.etaxonomy.taxeditor.operation.IPostOperationEnabled} object.
- */
- public AbstractPostTaxonOperation(String label, IUndoContext undoContext,
- IPostOperationEnabled postOperationEnabled) {
- super(label, undoContext, null, postOperationEnabled);
- }
+ /**
+ * A reference to the taxons TaxonNode
+ */
+ protected ITaxonTreeNode taxonNode;
+
+ protected UUID parentNodeUuid;
+
+
+ /**
+ * <p>Constructor for AbstractPostOperation.</p>
+ *
+ * @param label a {@link java.lang.String} object.
+ * @param undoContext a {@link org.eclipse.core.commands.operations.IUndoContext} object.
+ * @param taxon a {@link eu.etaxonomy.cdm.model.taxon.Taxon} object.
+ * @param postOperationEnabled a {@link eu.etaxonomy.taxeditor.operation.IPostOperationEnabled} object.
+ */
+ public AbstractPostTaxonOperation(String label, IUndoContext undoContext,
+ Taxon taxon, IPostOperationEnabled postOperationEnabled) {
+ super(label, undoContext, taxon, postOperationEnabled, null);
+ }
+
+ public AbstractPostTaxonOperation(String label, IUndoContext undoContext,
+ Taxon taxon, IPostOperationEnabled postOperationEnabled, ICdmEntitySessionEnabled cdmEntitySessionEnabled) {
+ super(label, undoContext, taxon, postOperationEnabled, cdmEntitySessionEnabled);
+ }
+
+ /**
+ * <p>Constructor for AbstractPostOperation.</p>
+ *
+ * @param label a {@link java.lang.String} object.
+ * @param undoContext a {@link org.eclipse.core.commands.operations.IUndoContext} object.
+ * @param taxonNode a {@link eu.etaxonomy.cdm.model.taxon.TaxonNode} object.
+ * @param postOperationEnabled a {@link eu.etaxonomy.taxeditor.operation.IPostOperationEnabled} object.
+ */
+ public AbstractPostTaxonOperation(String label, IUndoContext undoContext, TaxonNode taxonNode, IPostOperationEnabled postOperationEnabled){
+ this(label, undoContext, taxonNode, postOperationEnabled, null);
+ }
+
+ public AbstractPostTaxonOperation(String label, IUndoContext undoContext, TaxonNode taxonNode, IPostOperationEnabled postOperationEnabled, ICdmEntitySessionEnabled cdmEntitySessionEnabled){
+ this(label, undoContext, taxonNode.getTaxon(), postOperationEnabled, cdmEntitySessionEnabled);
+ this.taxonNode = taxonNode;
+ }
+
+ /**
+ * <p>Constructor for AbstractPostOperation.</p>
+ *
+ * @param label a {@link java.lang.String} object.
+ * @param undoContext a {@link org.eclipse.core.commands.operations.IUndoContext} object.
+ * @param parentNodeUuid a {@link java.util.UUID} object.
+ * @param postOperationEnabled a {@link eu.etaxonomy.taxeditor.operation.IPostOperationEnabled} object.
+ */
+ public AbstractPostTaxonOperation(String label, IUndoContext undoContext, UUID parentNodeUuid, IPostOperationEnabled postOperationEnabled){
+ super(label, undoContext, null, postOperationEnabled, null);
+ this.parentNodeUuid = parentNodeUuid;
+ }
+
+ /**
+ * <p>Constructor for AbstractPostOperation.</p>
+ *
+ * @param label a {@link java.lang.String} object.
+ * @param undoContext a {@link org.eclipse.core.commands.operations.IUndoContext} object.
+ * @param postOperationEnabled a {@link eu.etaxonomy.taxeditor.operation.IPostOperationEnabled} object.
+ */
+ public AbstractPostTaxonOperation(String label, IUndoContext undoContext,
+ IPostOperationEnabled postOperationEnabled) {
+ super(label, undoContext, null, postOperationEnabled, null);
+ }
+
+ public AbstractPostTaxonOperation(String label, IUndoContext undoContext,
+ IPostOperationEnabled postOperationEnabled, ICdmEntitySessionEnabled cdmEntitySessionEnabled) {
+ super(label, undoContext, null, postOperationEnabled, cdmEntitySessionEnabled);
+ }
/**
* @param text
--- /dev/null
+// $Id$
+/**
+* Copyright (C) 2015 EDIT
+* European Distributed Institute of Taxonomy
+* http://www.e-taxonomy.eu
+*
+* The contents of this file are subject to the Mozilla Public License Version 1.1
+* See LICENSE.TXT at the top of this package for the full license terms.
+*/
+package eu.etaxonomy.taxeditor.operation;
+
+import org.eclipse.core.runtime.IAdaptable;
+import org.eclipse.core.runtime.IProgressMonitor;
+import org.eclipse.core.runtime.IStatus;
+import org.eclipse.core.runtime.Status;
+
+import eu.etaxonomy.cdm.api.application.CdmChangeEvent.Action;
+import eu.etaxonomy.cdm.model.common.CdmBase;
+
+/**
+ * @author cmathew
+ * @date 21 Jul 2015
+ *
+ */
+public abstract class RemotingCdmDefaultOperation extends RemotingCdmOperation {
+
+ private CdmBase cdmEntity;
+
+ public RemotingCdmDefaultOperation(String label, Action action, Object source, boolean async) {
+ super(label, action, source, async);
+ }
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.operation.RemotingCdmOperation#doExecute(org.eclipse.core.runtime.IProgressMonitor, org.eclipse.core.runtime.IAdaptable)
+ */
+ @Override
+ protected boolean doExecute(IProgressMonitor monitor, IAdaptable info) {
+ try {
+ cdmEntity = doSimpleExecute(monitor, info);
+ } catch (Exception e) {
+ throw new RuntimeException(e);
+ }
+ return true;
+ }
+
+ protected abstract CdmBase doSimpleExecute(IProgressMonitor monitor, IAdaptable info) throws Exception;
+
+ @Override
+ protected void postExecute(boolean success) {
+ if(success && cdmEntity != null) {
+ fireDataChangeEvent(cdmEntity);
+ }
+
+ }
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.operation.RemotingCdmOperation#onComplete(boolean)
+ */
+ @Override
+ protected IStatus onComplete(boolean success) {
+ return Status.OK_STATUS;
+ }
+
+}
--- /dev/null
+// $Id$
+/**
+* Copyright (C) 2015 EDIT
+* European Distributed Institute of Taxonomy
+* http://www.e-taxonomy.eu
+*
+* The contents of this file are subject to the Mozilla Public License Version 1.1
+* See LICENSE.TXT at the top of this package for the full license terms.
+*/
+package eu.etaxonomy.taxeditor.operation;
+
+import org.eclipse.core.commands.AbstractHandler;
+import org.eclipse.core.commands.ExecutionEvent;
+import org.eclipse.core.commands.ExecutionException;
+import org.eclipse.core.commands.operations.AbstractOperation;
+import org.eclipse.core.runtime.IStatus;
+import org.eclipse.jface.dialogs.ErrorDialog;
+
+import eu.etaxonomy.taxeditor.model.AbstractUtility;
+import eu.etaxonomy.taxeditor.model.MessagingUtils;
+
+/**
+ * @author cmathew
+ * @date 16 Jun 2015
+ *
+ */
+public abstract class RemotingCdmHandler extends AbstractHandler {
+
+ private final String label;
+
+ public RemotingCdmHandler(String label) {
+ this.label = label;
+ }
+
+ /* (non-Javadoc)
+ * @see org.eclipse.core.commands.IHandler#execute(org.eclipse.core.commands.ExecutionEvent)
+ */
+ @Override
+ public Object execute(ExecutionEvent event) throws ExecutionException {
+ IStatus allowStatus = allowOperations(event);
+ if(allowStatus.isOK()) {
+ AbstractOperation op = prepareOperation(event);
+ if(op != null) {
+ AbstractUtility.executeOperation(op, this);
+ }
+ } else if(allowStatus.getSeverity() == IStatus.ERROR ||
+ allowStatus.getSeverity() == IStatus.WARNING ||
+ allowStatus.getSeverity() == IStatus.INFO) {
+ MessagingUtils.warningDialog("Can not perform " + label, event.getTrigger(), allowStatus);
+ }
+ return null;
+ }
+
+ public void postOperation(IStatus status) {
+
+ switch(status.getSeverity()) {
+ case IStatus.WARNING:
+ ErrorDialog.openError(null, "Operation successful but with warnings", null, status);
+ break;
+ case IStatus.ERROR:
+ ErrorDialog.openError(null, "Error executing operation", null, status);
+ break;
+ default:
+ }
+
+ onComplete();
+ }
+
+ public abstract IStatus allowOperations(ExecutionEvent event);
+
+ public abstract AbstractOperation prepareOperation(ExecutionEvent event);
+
+ public abstract void onComplete();
+
+}
--- /dev/null
+// $Id$
+/**
+* Copyright (C) 2015 EDIT
+* European Distributed Institute of Taxonomy
+* http://www.e-taxonomy.eu
+*
+* The contents of this file are subject to the Mozilla Public License Version 1.1
+* See LICENSE.TXT at the top of this package for the full license terms.
+*/
+package eu.etaxonomy.taxeditor.operation;
+
+import java.util.Set;
+
+import org.eclipse.core.commands.ExecutionException;
+import org.eclipse.core.commands.operations.AbstractOperation;
+import org.eclipse.core.runtime.IAdaptable;
+import org.eclipse.core.runtime.IProgressMonitor;
+import org.eclipse.core.runtime.IStatus;
+
+import eu.etaxonomy.cdm.api.application.CdmApplicationState;
+import eu.etaxonomy.cdm.api.application.CdmChangeEvent;
+import eu.etaxonomy.cdm.api.application.CdmChangeEvent.Action;
+import eu.etaxonomy.cdm.api.service.UpdateResult;
+import eu.etaxonomy.cdm.model.common.CdmBase;
+
+/**
+ * @author cmathew
+ * @date 16 Jun 2015
+ *
+ */
+public abstract class RemotingCdmOperation extends AbstractOperation {
+
+ private final Object source;
+ private final Action action;
+ private final boolean async;
+ protected Class entityType;
+
+ public RemotingCdmOperation(String label, Action action, Object source, boolean async) {
+ super(label);
+ this.source = source;
+ this.action = action;
+ this.async = async;
+ }
+
+ /* (non-Javadoc)
+ * @see org.eclipse.core.commands.operations.AbstractOperation#execute(org.eclipse.core.runtime.IProgressMonitor, org.eclipse.core.runtime.IAdaptable)
+ */
+ @Override
+ public IStatus execute(IProgressMonitor monitor, IAdaptable info) throws ExecutionException {
+
+ boolean success = doExecute(monitor, info);
+ postExecute(success);
+ return onComplete(success);
+ }
+
+ protected abstract boolean doExecute(IProgressMonitor monitor, IAdaptable info);
+
+ protected void postExecute(boolean success) {}
+
+ protected abstract IStatus onComplete(boolean success);
+
+ protected void fireDataChangeEvent(Set<CdmBase> changedObjects) {
+ if(changedObjects != null && !changedObjects.isEmpty()) {
+ CdmApplicationState.getCurrentDataChangeService().fireChangeEvent(new CdmChangeEvent(action, changedObjects, source.getClass()), async);
+ }
+ }
+
+ protected void fireDataChangeEvent(UpdateResult updateResult) {
+ Set<CdmBase> updatedObjects = updateResult.getUpdatedObjects();
+ CdmApplicationState.getCurrentDataChangeService()
+ .fireChangeEvent(new CdmChangeEvent(action, updatedObjects, source.getClass(), entityType), async);
+ }
+
+ protected void fireDataChangeEvent(CdmBase cdmBase) {
+ if(cdmBase != null) {
+ CdmApplicationState.getCurrentDataChangeService().fireChangeEvent(new CdmChangeEvent(action, cdmBase, source.getClass()), async);
+ }
+ }
+
+ /* (non-Javadoc)
+ * @see org.eclipse.core.commands.operations.AbstractOperation#redo(org.eclipse.core.runtime.IProgressMonitor, org.eclipse.core.runtime.IAdaptable)
+ */
+ @Override
+ public IStatus redo(IProgressMonitor monitor, IAdaptable info) throws ExecutionException {
+ // TODO Auto-generated method stub
+ return null;
+ }
+
+ /* (non-Javadoc)
+ * @see org.eclipse.core.commands.operations.AbstractOperation#undo(org.eclipse.core.runtime.IProgressMonitor, org.eclipse.core.runtime.IAdaptable)
+ */
+ @Override
+ public IStatus undo(IProgressMonitor monitor, IAdaptable info) throws ExecutionException {
+ // TODO Auto-generated method stub
+ return null;
+ }
+
+}
--- /dev/null
+// $Id$
+/**
+ * Copyright (C) 2015 EDIT
+ * European Distributed Institute of Taxonomy
+ * http://www.e-taxonomy.eu
+ *
+ * The contents of this file are subject to the Mozilla Public License Version 1.1
+ * See LICENSE.TXT at the top of this package for the full license terms.
+ */
+package eu.etaxonomy.taxeditor.operation;
+
+import java.util.Collection;
+import java.util.HashSet;
+import java.util.Set;
+
+import org.eclipse.core.runtime.IAdaptable;
+import org.eclipse.core.runtime.IProgressMonitor;
+import org.eclipse.core.runtime.IStatus;
+import org.eclipse.core.runtime.MultiStatus;
+import org.eclipse.core.runtime.Status;
+
+import eu.etaxonomy.cdm.api.application.CdmChangeEvent.Action;
+import eu.etaxonomy.cdm.api.service.UpdateResult;
+
+/**
+ * @author cmathew
+ * @date 16 Jun 2015
+ *
+ */
+public abstract class RemotingCdmUpdateOperation extends RemotingCdmOperation {
+
+ private UpdateResult updateResult;
+ public static boolean throwExceptions = false;
+
+ /**
+ * @param label
+ */
+ public RemotingCdmUpdateOperation(String label, Action action, Object source, boolean async) {
+ super(label, action, source, async);
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.operation.RemotingCdmOperation#doExecute(org.eclipse.core.runtime.IProgressMonitor, org.eclipse.core.runtime.IAdaptable)
+ */
+ @Override
+ protected boolean doExecute(IProgressMonitor monitor, IAdaptable info) {
+ try {
+ updateResult = doUpdateExecute(monitor, info);
+ } catch (Exception e) {
+ if(throwExceptions) {
+ throw new RuntimeException(e);
+ } else {
+ UpdateResult exceptionResult = new UpdateResult();
+ exceptionResult.addException(e);
+ exceptionResult.setAbort();
+ updateResult = exceptionResult;
+ }
+ }
+ return updateResult.isOk();
+ }
+
+ protected abstract UpdateResult doUpdateExecute(IProgressMonitor monitor, IAdaptable info) throws Exception;
+
+ @Override
+ protected void postExecute(boolean success) {
+ if(success && updateResult != null) {
+ fireDataChangeEvent(updateResult);
+ }
+
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.operation.RemotingCdmOperation#onComplete(boolean)
+ */
+ @Override
+ protected IStatus onComplete(boolean success) {
+
+ if(updateResult != null) {
+ int statusFlag = IStatus.OK;
+
+ Collection<Exception> exceptions = updateResult.getExceptions();
+ StringBuffer statusMsg = new StringBuffer();
+ if(success && updateResult.isOk()) {
+ if(exceptions.isEmpty()) {
+ return Status.OK_STATUS;
+ } else {
+ statusFlag = IStatus.WARNING;
+ statusMsg.append(getLabel() + " executed sucessfully but with warnings." + System.lineSeparator());
+ }
+ } else if (updateResult.isError()) {
+ statusFlag = IStatus.ERROR;
+ statusMsg.append(getLabel() + " failed." + System.lineSeparator());
+ } else if (updateResult.isAbort()) {
+ statusFlag = IStatus.ERROR;
+ statusMsg.append(getLabel() + " aborted." + System.lineSeparator());
+ }
+
+ Status[] childStatus = new Status[exceptions.size()];
+ int count = 0;
+ Set<String> messages = new HashSet<String>();
+ for(Exception ex : exceptions) {
+ Status status = new Status(statusFlag,
+ "unknown",
+ statusFlag,
+ ex.getLocalizedMessage(),
+ ex);
+ messages.add(ex.getLocalizedMessage());
+ childStatus[count] = status;
+ count++;
+ }
+
+ statusMsg.append("Please click on the 'Details' button to see all the errors / warnings");
+
+ MultiStatus multiStatus = new MultiStatus("unknown",
+ statusFlag,
+ childStatus,
+ statusMsg.toString(),
+ null);
+ return multiStatus;
+ }
+ return null;
+ }
+}
import eu.etaxonomy.cdm.model.reference.INomenclaturalReference;
import eu.etaxonomy.cdm.model.reference.Reference;
import eu.etaxonomy.cdm.strategy.match.MatchException;
+import eu.etaxonomy.cdm.strategy.match.MatchStrategyConfigurator.MatchStrategy;
import eu.etaxonomy.cdm.strategy.parser.NonViralNameParserImpl;
import eu.etaxonomy.taxeditor.model.MessagingUtils;
import eu.etaxonomy.taxeditor.preference.PreferencesUtil;
* @param unparsedNameString a {@link java.lang.String} object.
* @return a {@link eu.etaxonomy.cdm.model.name.TaxonNameBase} object.
*/
- public static TaxonNameBase parseReferencedName(String unparsedNameString, Rank rank){
- TaxonNameBase name = nonViralNameParser.parseReferencedName(unparsedNameString,
+ public static NonViralName parseReferencedName(String unparsedNameString, Rank rank){
+ NonViralName name = nonViralNameParser.parseReferencedName(unparsedNameString,
PreferencesUtil.getPreferredNomenclaturalCode(), rank);
// if (name.hasProblem()) {
return name;
}
- public static TaxonNameBase parseName(String unparsedNameString, Rank rank){
- TaxonNameBase name = nonViralNameParser.parseFullName(unparsedNameString,
+ public static NonViralName parseName(String unparsedNameString, Rank rank){
+ NonViralName name = nonViralNameParser.parseFullName(unparsedNameString,
PreferencesUtil.getPreferredNomenclaturalCode(), rank);
return name;
*
* @return a {@link eu.etaxonomy.cdm.model.name.TaxonNameBase} object.
*/
- public static TaxonNameBase createEmptyName(){
+ public static NonViralName createEmptyName(){
return nonViralNameParser.getNonViralNameInstance("", PreferencesUtil.getPreferredNomenclaturalCode());
}
return new ArrayList<INomenclaturalReference>();
}
try{
- return CdmStore.getCommonService().findMatching(nomenclaturalReference, MatchStrategyConfigurator.ReferenceMatchStrategy());
+
+ return CdmStore.getCommonService().findMatching(nomenclaturalReference, MatchStrategy.Reference);
+
}catch (MatchException e) {
MessagingUtils.error(this.getClass(), "Error finding matching references", e);
}
}
try{
- return CdmStore.getCommonService().findMatching(authorTeam, MatchStrategyConfigurator.TeamOrPersonMatchStrategy());
+
+ return CdmStore.getCommonService().findMatching(authorTeam, MatchStrategy.TeamOrPerson);
+
}catch (MatchException e) {
MessagingUtils.error(this.getClass(), "Error finding matching authors", e);
}
private List<TaxonNameBase> findMatchingLatinNames(TaxonNameBase taxonNameBase) {
try {
- return CdmStore.getCommonService().findMatching(taxonNameBase, MatchStrategyConfigurator.NonViralNameMatchStrategy());
+
+ return CdmStore.getCommonService().findMatching(taxonNameBase, MatchStrategy.NonViralName);
+
} catch (MatchException e) {
MessagingUtils.error(this.getClass(), "Error finding matching names", e);
// $Id$
/**
-* Copyright (C) 2007 EDIT
-* European Distributed Institute of Taxonomy
-* http://www.e-taxonomy.eu
-*
-* The contents of this file are subject to the Mozilla Public License Version 1.1
-* See LICENSE.TXT at the top of this package for the full license terms.
-*/
+ * Copyright (C) 2007 EDIT
+ * European Distributed Institute of Taxonomy
+ * http://www.e-taxonomy.eu
+ *
+ * The contents of this file are subject to the Mozilla Public License Version 1.1
+ * See LICENSE.TXT at the top of this package for the full license terms.
+ */
package eu.etaxonomy.taxeditor.preference;
*/
public class CdmStorePropertyTester extends PropertyTester {
- private static final String EDITOR_IS_CONNECTED_TO_DB = "isCdmStoreConnected";
+ private static final String EDITOR_IS_CONNECTED_TO_DB = "isCdmStoreConnected";
+ private static final String IS_REMOTING = "isRemoting";
+ private static final String IS_STANDALONE = "isStandAlone";
+
+ @Override
+ public boolean test(Object receiver, String property, Object[] args,
+ Object expectedValue) {
+
+ if(EDITOR_IS_CONNECTED_TO_DB.equals(property)){
+ return isCdmStoreConnected();
+ }
+
+ if(IS_REMOTING.equals(property)){
+ if(!isCdmStoreConnected()) {
+ return false;
+ } else {
+ return isRemoting();
+ }
+ }
+
+ if(IS_STANDALONE.equals(property)){
+ if(!isCdmStoreConnected()) {
+ return false;
+ } else {
+ return !isRemoting();
+ }
+ }
+ return false;
+ }
+
+ private boolean isCdmStoreConnected(){
+ boolean active = CdmStore.isActive();
+ return active;
+ }
+
+ private boolean isRemoting() {
+ return CdmStore.getCurrentSessionManager().isRemoting();
- @Override
- public boolean test(Object receiver, String property, Object[] args,
- Object expectedValue) {
+ }
- if(EDITOR_IS_CONNECTED_TO_DB.equals(property)){
- return isCdmStoreConnected();
- }
- return false;
- }
- private boolean isCdmStoreConnected(){
- boolean active = CdmStore.isActive();
- return active;
- }
}
import java.util.List;
-import org.eclipse.jface.preference.PreferencePage;
import org.eclipse.jface.viewers.ISelectionChangedListener;
import org.eclipse.jface.viewers.IStructuredSelection;
import org.eclipse.jface.viewers.ListViewer;
import eu.etaxonomy.taxeditor.featuretree.FeatureTreeContentProvider;
import eu.etaxonomy.taxeditor.featuretree.FeatureTreeLabelProvider;
import eu.etaxonomy.taxeditor.model.MessagingUtils;
+import eu.etaxonomy.taxeditor.preference.menu.CdmPreferencePage;
import eu.etaxonomy.taxeditor.store.CdmStore;
/**
* @created Sep 16, 2010
* @version 1.0
*/
-public class DefaultFeatureTreePreferenecs extends PreferencePage implements IWorkbenchPreferencePage {
+public class DefaultFeatureTreePreferenecs extends CdmPreferencePage implements IWorkbenchPreferencePage {
private FeatureTree defaultFeatureTreeForTextualDescription;
private FeatureTree defaultFeatureTreeForStructuredDescription;
package eu.etaxonomy.taxeditor.preference;
-import org.eclipse.jface.preference.PreferencePage;
import org.eclipse.jface.resource.ImageDescriptor;
import org.eclipse.swt.SWT;
import org.eclipse.swt.layout.GridLayout;
import org.eclipse.ui.IWorkbench;
import org.eclipse.ui.IWorkbenchPreferencePage;
+import eu.etaxonomy.taxeditor.preference.menu.CdmPreferencePage;
import eu.etaxonomy.taxeditor.store.CdmStore;
import eu.etaxonomy.taxeditor.ui.element.CommandHandlerButton;
* @created Aug 5, 2010
* @version 1.0
*/
-public class FeatureTreePreferences extends PreferencePage implements
+public class FeatureTreePreferences extends CdmPreferencePage implements
IWorkbenchPreferencePage {
/**
public static final String SHOW_ADVANCED_MEDIA_SECTION = "eu.etaxonomy.taxeditor.media.showAdvancedMedia";
+ public static final String ALWAYS_OPEN_SPECIMEN_IN_EDITOR = "eu.etaxonomy.taxeditor.specimen.alwaysOpenSpecimenInEditor";
+
+ public static final String PROMPT_FOR_OPEN_SPECIMEN_IN_EDITOR = "eu.etaxonomy.taxeditor.specimen.promptForOpenSpecimenInEditor";
+
// TODO RL
public static final String IS_RL = "eu.etaxonomy.taxeditor.isRL";
*/
package eu.etaxonomy.taxeditor.preference;
+import org.eclipse.jface.dialogs.MessageDialogWithToggle;
import org.eclipse.jface.preference.BooleanFieldEditor;
+import org.eclipse.jface.preference.ComboFieldEditor;
import org.eclipse.jface.preference.FieldEditorPreferencePage;
import org.eclipse.ui.IWorkbench;
import org.eclipse.ui.IWorkbenchPreferencePage;
*/
public class SpecimenOrObservationPreferences extends FieldEditorPreferencePage implements IWorkbenchPreferencePage {
- /* (non-Javadoc)
- * @see org.eclipse.ui.IWorkbenchPreferencePage#init(org.eclipse.ui.IWorkbench)
- */
@Override
public void init(IWorkbench workbench) {
setPreferenceStore(PreferencesUtil.getPreferenceStore());
}
- /* (non-Javadoc)
- * @see org.eclipse.jface.preference.FieldEditorPreferencePage#createFieldEditors()
- */
@Override
protected void createFieldEditors() {
addField(new BooleanFieldEditor(IPreferenceKeys.DETERMINATION_ONLY_FOR_FIELD_UNITS,
addField(new BooleanFieldEditor(IPreferenceKeys.SHOW_TAXON_ASSOCIATIONS,
"Show taxon associations of a specimen in the details view",
getFieldEditorParent()));
-
+ addField(new ComboFieldEditor(IPreferenceKeys.ALWAYS_OPEN_SPECIMEN_IN_EDITOR,
+ "Open newly created specimens in specimen editor", new String[][] {
+ { "always", MessageDialogWithToggle.ALWAYS }, { "never", MessageDialogWithToggle.NEVER } },
+ getFieldEditorParent()));
}
import eu.etaxonomy.cdm.strategy.match.MatchException;
import eu.etaxonomy.cdm.strategy.match.MatchMode;
import eu.etaxonomy.taxeditor.model.MessagingUtils;
-import eu.etaxonomy.taxeditor.parser.MatchStrategyConfigurator;
+import eu.etaxonomy.taxeditor.preference.PreferencesUtil;
import eu.etaxonomy.taxeditor.store.CdmStore;
/**
/** {@inheritDoc} */
@Override
protected void performApply() {
- MatchStrategyConfigurator.setMatchStrategy(matchStrategy);
+ PreferencesUtil.setMatchStrategy(matchStrategy);
super.performApply();
}
// $Id$
/**
* Copyright (C) 2007 EDIT
-* European Distributed Institute of Taxonomy
+* European Distributed Institute of Taxonomy
* http://www.e-taxonomy.eu
-*
+*
* The contents of this file are subject to the Mozilla Public License Version 1.1
* See LICENSE.TXT at the top of this package for the full license terms.
*/
import eu.etaxonomy.cdm.model.name.NonViralName;
import eu.etaxonomy.cdm.strategy.match.IMatchStrategy;
import eu.etaxonomy.cdm.strategy.match.MatchException;
+import eu.etaxonomy.cdm.strategy.match.MatchStrategyConfigurator;
import eu.etaxonomy.taxeditor.model.MessagingUtils;
-import eu.etaxonomy.taxeditor.parser.MatchStrategyConfigurator;
/**
* <p>NonViralNameMatchingPreference class.</p>
* @see org.eclipse.ui.IWorkbenchPreferencePage#init(org.eclipse.ui.IWorkbench)
*/
/** {@inheritDoc} */
- public void init(IWorkbench workbench) {
+ @Override
+ public void init(IWorkbench workbench) {
clazz = NonViralName.class;
-
+
try {
matchStrategy = MatchStrategyConfigurator.NonViralNameMatchStrategy();
} catch (MatchException e) {
throw new RuntimeException(e);
}
}
-
+
/* (non-Javadoc)
* @see eu.etaxonomy.taxeditor.preference.matching.AbstractMatchingPreferences#getDefaultMatchStrategy()
*/
// $Id$
/**
* Copyright (C) 2007 EDIT
-* European Distributed Institute of Taxonomy
+* European Distributed Institute of Taxonomy
* http://www.e-taxonomy.eu
-*
+*
* The contents of this file are subject to the Mozilla Public License Version 1.1
* See LICENSE.TXT at the top of this package for the full license terms.
*/
import eu.etaxonomy.cdm.model.reference.Reference;
import eu.etaxonomy.cdm.strategy.match.IMatchStrategy;
import eu.etaxonomy.cdm.strategy.match.MatchException;
+import eu.etaxonomy.cdm.strategy.match.MatchStrategyConfigurator;
import eu.etaxonomy.taxeditor.model.MessagingUtils;
-import eu.etaxonomy.taxeditor.parser.MatchStrategyConfigurator;
/**
* <p>ReferenceMatchingPreference class.</p>
* @see org.eclipse.ui.IWorkbenchPreferencePage#init(org.eclipse.ui.IWorkbench)
*/
/** {@inheritDoc} */
- public void init(IWorkbench workbench) {
+ @Override
+ public void init(IWorkbench workbench) {
clazz = Reference.class;
-
+
try {
matchStrategy = MatchStrategyConfigurator.ReferenceMatchStrategy();
} catch (MatchException e) {
// $Id$
/**
* Copyright (C) 2007 EDIT
-* European Distributed Institute of Taxonomy
+* European Distributed Institute of Taxonomy
* http://www.e-taxonomy.eu
-*
+*
* The contents of this file are subject to the Mozilla Public License Version 1.1
* See LICENSE.TXT at the top of this package for the full license terms.
*/
import eu.etaxonomy.cdm.model.agent.TeamOrPersonBase;
import eu.etaxonomy.cdm.strategy.match.IMatchStrategy;
import eu.etaxonomy.cdm.strategy.match.MatchException;
+import eu.etaxonomy.cdm.strategy.match.MatchStrategyConfigurator;
import eu.etaxonomy.taxeditor.model.MessagingUtils;
-import eu.etaxonomy.taxeditor.parser.MatchStrategyConfigurator;
/**
* <p>TeamOrPersonMatchingPreference class.</p>
* @see org.eclipse.ui.IWorkbenchPreferencePage#init(org.eclipse.ui.IWorkbench)
*/
/** {@inheritDoc} */
- public void init(IWorkbench workbench) {
+ @Override
+ public void init(IWorkbench workbench) {
clazz = TeamOrPersonBase.class;
-
+
try {
matchStrategy = MatchStrategyConfigurator.TeamOrPersonMatchStrategy();
} catch (MatchException e) {
MessagingUtils.error(this.getClass(), e);
throw new RuntimeException(e);
}
- }
+ }
/* (non-Javadoc)
* @see eu.etaxonomy.taxeditor.preference.matching.AbstractMatchingPreferences#getDefaultMatchStrategy()
import org.eclipse.core.commands.ParameterizedCommand;
import org.eclipse.core.commands.common.NotDefinedException;
import org.eclipse.core.runtime.IStatus;
-import org.eclipse.jface.preference.PreferencePage;
import org.eclipse.jface.viewers.CheckStateChangedEvent;
import org.eclipse.jface.viewers.CheckboxTableViewer;
import org.eclipse.jface.viewers.ICheckStateListener;
import eu.etaxonomy.taxeditor.store.TermStore;
/**
- * <p>Abstract AbstractMenuPreferences class.</p>
- *
* @author n.hoffmann
* @created 12.06.2009
* @version 1.0
*/
-public abstract class AbstractMenuPreferences<T extends DefinedTermBase> extends PreferencePage implements
+public abstract class AbstractMenuPreferences<T extends DefinedTermBase> extends CdmPreferencePage implements
IWorkbenchPreferencePage, IConversationEnabled{
private Button toggleButton;
toggleButton = new Button(buttonContainer, SWT.PUSH);
toggleButton.setText("Toggle");
toggleButton.addSelectionListener(new SelectionAdapter(){
- /* (non-Javadoc)
- * @see org.eclipse.swt.events.SelectionAdapter#widgetSelected(org.eclipse.swt.events.SelectionEvent)
- */
@Override
public void widgetSelected(SelectionEvent e) {
state = state ? false : true;
return container;
}
-
- /**
- * <p>refresh</p>
- *
- * @param definedTerms a {@link java.util.List} object.
- */
protected void refresh(List<T> definedTerms) {
tableViewer.setInput(definedTerms);
tableViewer.setCheckedElements(preferedTerms.toArray());
}
- /**
- * <p>createAdditionalContent</p>
- *
- * @param container a {@link org.eclipse.swt.widgets.Composite} object.
- */
protected void createAdditionalContent(Composite container) {
// implement where needed
}
- /* (non-Javadoc)
- * @see eu.etaxonomy.taxeditor.preference.AbstractMenuPreferences#createButtons(org.eclipse.swt.widgets.Composite)
- */
- /**
- * <p>createEditButtons</p>
- *
- * @param buttonContainer a {@link org.eclipse.swt.widgets.Composite} object.
- */
protected void createEditButtons(Composite buttonContainer) {
editButton = new Button(buttonContainer, SWT.PUSH);
*/
protected void addNewButtonListeners() {
newButton.addSelectionListener(new SelectionAdapter(){
- /* (non-Javadoc)
- * @see org.eclipse.swt.events.SelectionAdapter#widgetSelected(org.eclipse.swt.events.SelectionEvent)
- */
@Override
public void widgetSelected(SelectionEvent e) {
VocabularyTermWizard<T> wizard = new VocabularyTermWizard<T>(getTermClass(), getConversationHolder());
}
}
-
});
}
*/
protected void addEditButtonListeners() {
editButton.addSelectionListener(new SelectionAdapter(){
- /* (non-Javadoc)
- * @see org.eclipse.swt.events.SelectionAdapter#widgetSelected(org.eclipse.swt.events.SelectionEvent)
- */
@Override
public void widgetSelected(SelectionEvent event) {
}
}
- /*
- * (non-Javadoc)
- * @see org.eclipse.jface.preference.PreferencePage#performDefaults()
- */
/**
* <p>performDefaults</p>
*/
tableViewer.setAllChecked(true);
}
- /**
- * <p>Getter for the field <code>tableViewer</code>.</p>
- *
- * @return the tableViewer
- */
public CheckboxTableViewer getTableViewer() {
return tableViewer;
}
- /* (non-Javadoc)
- * @see org.eclipse.jface.preference.PreferencePage#performOk()
- */
/** {@inheritDoc} */
@Override
public boolean performOk() {
PreferencesUtil.firePreferencesChanged(this.getClass());
- return true;
+
+ return super.performOk();
}
private boolean checkNoneChecked(){
}
}
- /**
- * <p>getTermClass</p>
- *
- * @return a {@link java.lang.Class} object.
- */
protected abstract Class<T> getTermClass();
- /* (non-Javadoc)
- * @see eu.etaxonomy.cdm.api.conversation.IConversationEnabled#getConversationHolder()
- */
@Override
public ConversationHolder getConversationHolder() {
if(conversation == null){
return conversation;
}
- /* (non-Javadoc)
- * @see eu.etaxonomy.cdm.persistence.hibernate.ICdmPostDataChangeObserver#update(eu.etaxonomy.cdm.persistence.hibernate.CdmDataChangeMap)
- */
@Override
public void update(CdmDataChangeMap changeEvents) {
// implement where needed
--- /dev/null
+// $Id$
+/**
+* Copyright (C) 2015 EDIT
+* European Distributed Institute of Taxonomy
+* http://www.e-taxonomy.eu
+*
+* The contents of this file are subject to the Mozilla Public License Version 1.1
+* See LICENSE.TXT at the top of this package for the full license terms.
+*/
+package eu.etaxonomy.taxeditor.preference.menu;
+
+import java.util.Collection;
+import java.util.List;
+import java.util.Map;
+
+import org.eclipse.jface.preference.PreferencePage;
+import org.eclipse.jface.resource.ImageDescriptor;
+
+import eu.etaxonomy.cdm.model.common.CdmBase;
+import eu.etaxonomy.taxeditor.session.ICdmEntitySession;
+import eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled;
+import eu.etaxonomy.taxeditor.store.CdmStore;
+
+/**
+ * @author cmathew
+ * @date 30 Jul 2015
+ *
+ */
+public abstract class CdmPreferencePage extends PreferencePage implements ICdmEntitySessionEnabled {
+
+ private ICdmEntitySession previousCdmEntitySession;
+ private boolean isApply;
+
+ public CdmPreferencePage() {
+ initSession();
+ }
+
+ public CdmPreferencePage(String title) {
+ super(title);
+ initSession();
+ }
+
+ public CdmPreferencePage(String title, ImageDescriptor image) {
+ super(title, image);
+ initSession();
+ }
+
+ private void initSession() {
+ previousCdmEntitySession = CdmStore.getCurrentSessionManager().getActiveSession();
+ bindNullSession();
+ }
+
+ private void bindNullSession() {
+ if(CdmStore.isActive()) {
+ CdmStore.getCurrentSessionManager().bindNullSession();
+ }
+ }
+
+ @Override
+ public boolean performOk() {
+ if(previousCdmEntitySession != null && !isApply) {
+ previousCdmEntitySession.bind();
+ }
+ return super.performOk();
+ }
+
+ @Override
+ public boolean performCancel() {
+ if(previousCdmEntitySession != null) {
+ previousCdmEntitySession.bind();
+ }
+ return super.performCancel();
+ }
+
+ @Override
+ public void performApply() {
+ isApply = true;
+ super.performApply();
+ isApply = false;
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled#getCdmEntitySession()
+ */
+ @Override
+ public ICdmEntitySession getCdmEntitySession() {
+ return CdmStore.getCurrentSessionManager().getNullSession();
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled#getRootEntities()
+ */
+ @Override
+ public <T extends CdmBase> Collection<T> getRootEntities() {
+ return null;
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled#getPropertyPathsMap()
+ */
+ @Override
+ public Map<Object, List<String>> getPropertyPathsMap() {
+ return null;
+ }
+
+}
import java.util.ArrayList;
import java.util.Arrays;
+import java.util.Collection;
+import java.util.HashMap;
import java.util.List;
+import java.util.Map;
import java.util.Set;
import java.util.UUID;
import eu.etaxonomy.cdm.api.service.ITermService;
import eu.etaxonomy.cdm.api.service.IVocabularyService;
+import eu.etaxonomy.cdm.model.common.CdmBase;
import eu.etaxonomy.cdm.model.common.DefinedTermBase;
import eu.etaxonomy.cdm.model.common.TermType;
import eu.etaxonomy.cdm.model.common.TermVocabulary;
import eu.etaxonomy.taxeditor.editor.definedterm.TermContentProvider;
import eu.etaxonomy.taxeditor.editor.definedterm.TermLabelProvider;
import eu.etaxonomy.taxeditor.preference.PreferencesUtil;
+import eu.etaxonomy.taxeditor.session.ICdmEntitySession;
+import eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled;
import eu.etaxonomy.taxeditor.store.CdmStore;
/**
* @date 21.07.2014
*
*/
-public class AvailableDistributionPage extends WizardPage {
+public class AvailableDistributionPage extends WizardPage implements ICdmEntitySessionEnabled {
private CheckboxTreeViewer viewer;
protected AvailableDistributionPage(String pageName) {
super(pageName);
// TODO check if configuration exists
+ CdmStore.getCurrentSessionManager().bindNullSession();
}
/*
}
}
+ @Override
+ public void dispose() {
+ CdmStore.getCurrentSessionManager().dispose(this);
+ super.dispose();
+ }
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled#getCdmEntitySession()
+ */
+ @Override
+ public ICdmEntitySession getCdmEntitySession() {
+ return CdmStore.getCurrentSessionManager().getNullSession();
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled#getRootEntities()
+ */
+ @Override
+ public <T extends CdmBase> Collection<T> getRootEntities() {
+ return null;
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled#getPropertyPathsMap()
+ */
+ @Override
+ public Map<Object, List<String>> getPropertyPathsMap() {
+ Map<Object, List<String>> propertyPathsMap = new HashMap<Object, List<String>>();
+ List<String> termsPropertyPaths = Arrays.asList(new String[] {
+ "includes"
+ });
+ propertyPathsMap.put("includes", termsPropertyPaths);
+ propertyPathsMap.put("terms", termsPropertyPaths);
+ return propertyPathsMap;
+ }
+
}
--- /dev/null
+// $Id$
+/**
+* Copyright (C) 2015 EDIT
+* European Distributed Institute of Taxonomy
+* http://www.e-taxonomy.eu
+*
+* The contents of this file are subject to the Mozilla Public License Version 1.1
+* See LICENSE.TXT at the top of this package for the full license terms.
+*/
+package eu.etaxonomy.taxeditor.store;
+
+/**
+ * @author cmathew
+ * @date 24 Jul 2015
+ *
+ */
+public class CdmAuthenticationException extends RuntimeException {
+
+ public CdmAuthenticationException(String message, Throwable t) {
+ super(message,t);
+ }
+
+}
package eu.etaxonomy.taxeditor.store;
-import java.lang.reflect.InvocationTargetException;
-import java.lang.reflect.Method;
-import java.lang.reflect.Type;
import java.util.EnumSet;
import org.eclipse.core.runtime.IProgressMonitor;
import org.springframework.core.io.ClassPathResource;
import org.springframework.core.io.Resource;
import org.springframework.security.access.PermissionEvaluator;
-import org.springframework.security.authentication.ProviderManager;
+import org.springframework.security.authentication.AuthenticationManager;
import org.springframework.security.core.Authentication;
import org.springframework.security.core.context.SecurityContext;
import org.springframework.security.core.context.SecurityContextHolder;
+import eu.etaxonomy.cdm.api.application.CdmApplicationException;
+import eu.etaxonomy.cdm.api.application.CdmApplicationRemoteController;
+import eu.etaxonomy.cdm.api.application.CdmApplicationState;
import eu.etaxonomy.cdm.api.application.ICdmApplicationConfiguration;
+import eu.etaxonomy.cdm.api.cache.CdmServiceCacher;
import eu.etaxonomy.cdm.api.conversation.ConversationHolder;
import eu.etaxonomy.cdm.api.service.ICommonService;
import eu.etaxonomy.cdm.api.service.IService;
import eu.etaxonomy.cdm.config.ICdmSource;
import eu.etaxonomy.cdm.database.DbSchemaValidation;
-import eu.etaxonomy.cdm.ext.geo.IEditGeoService;
import eu.etaxonomy.cdm.model.common.CdmBase;
import eu.etaxonomy.cdm.model.common.Language;
import eu.etaxonomy.cdm.persistence.hibernate.permission.CRUD;
import eu.etaxonomy.cdm.persistence.hibernate.permission.ICdmPermissionEvaluator;
import eu.etaxonomy.cdm.persistence.hibernate.permission.Role;
-import eu.etaxonomy.cdm.remote.CdmRemoteSourceException;
import eu.etaxonomy.taxeditor.datasource.CdmDataSourceRepository;
import eu.etaxonomy.taxeditor.io.ExportManager;
import eu.etaxonomy.taxeditor.io.ImportManager;
import eu.etaxonomy.taxeditor.model.AbstractUtility;
import eu.etaxonomy.taxeditor.model.MessagingUtils;
import eu.etaxonomy.taxeditor.preference.PreferencesUtil;
+import eu.etaxonomy.taxeditor.remoting.cache.CdmRemoteCacheManager;
+import eu.etaxonomy.taxeditor.session.ICdmEntitySessionManager;
+import eu.etaxonomy.taxeditor.session.mock.MockCdmEntitySessionManager;
import eu.etaxonomy.taxeditor.store.internal.TaxeditorStorePlugin;
+import eu.etaxonomy.taxeditor.ui.dialog.RemotingLoginDialog;
import eu.etaxonomy.taxeditor.view.datasource.CdmDataSourceViewPart;
/**
*/
public class CdmStore {
- private static final Resource DEFAULT_APPLICATION_CONTEXT = new ClassPathResource(
- "/eu/etaxonomy/cdm/editorApplicationContext.xml",
- TaxeditorStorePlugin.class);
- private static final DbSchemaValidation DEFAULT_DB_SCHEMA_VALIDATION = DbSchemaValidation.VALIDATE;
-
- private static CdmStore instance;
-
- private final ICdmApplicationConfiguration applicationConfiguration;
-
- private static ContextManager contextManager = new ContextManager();
-
- private static LoginManager loginManager = new LoginManager();
-
- private static TermManager termManager = new TermManager();
-
- private static SearchManager searchManager = new SearchManager();
-
- private static EditorManager editorManager = new EditorManager();
-
- private static UseObjectStore useObjectInitializer = new UseObjectStore();
-
- private static CdmStoreConnector job;
-
- private Language language;
-
- private ICdmSource cdmSource;
-
- private boolean isConnected;
-
- /**
- * <p>
- * getDefault
- * </p>
- *
- * @return a {@link eu.etaxonomy.taxeditor.store.CdmStore} object.
- */
- protected static CdmStore getDefault() {
- if (instance != null && instance.isConnected) {
- return instance;
- } else{// if (instance == null || !instance.isConnected) {
-
- MessagingUtils.noDataSourceWarningDialog(instance);
-
- AbstractUtility.showView(CdmDataSourceViewPart.ID);
- return null;
- }
- }
-
- /**
- * Initialize the with the last edited datasource
- */
- public static void connect() {
-
- ICdmSource cdmSource;
- try {
- cdmSource = CdmDataSourceRepository.getCurrentCdmSource();
- connect(cdmSource);
- } catch (CdmRemoteSourceException e) {
- MessagingUtils.messageDialog("Connection to CDM Source Failed", CdmStore.class, "Could not connect to target CDM Source", e);
- }
-
-
- }
-
- /**
- * Initialize with a specific datasource
- *
- * @param datasource
- * a {@link eu.etaxonomy.cdm.database.ICdmDataSource} object.
- */
- public static void connect(ICdmSource cdmSource) {
- connect(cdmSource, DEFAULT_DB_SCHEMA_VALIDATION,
- DEFAULT_APPLICATION_CONTEXT);
- }
-
- /**
- * Initialize and provide
- *
- * @param datasource
- * @param dbSchemaValidation
- * @param applicationContextBean
- */
- private static void connect(final ICdmSource cdmSource,
- final DbSchemaValidation dbSchemaValidation,
- final Resource applicationContextBean) {
- MessagingUtils.info("Connecting to datasource: " + cdmSource);
-
- job = new CdmStoreConnector(Display.getDefault(), cdmSource,
- dbSchemaValidation, applicationContextBean);
- job.setUser(true);
- job.setPriority(Job.BUILD);
- job.schedule();
-
- }
-
- public static boolean isConnecting() {
- return job != null && job.getState() == Job.RUNNING;
- }
-
- /**
- * Closes the current application context
- *
- * @param monitor
- * a {@link org.eclipse.core.runtime.IProgressMonitor} object.
- */
- public static void close(final IProgressMonitor monitor) {
- Display.getDefault().asyncExec(new Runnable() {
- /*
- * (non-Javadoc)
- *
- * @see java.lang.Runnable#run()
- */
- @Override
- public void run() {
- getContextManager().notifyContextAboutToStop(monitor);
- if ((monitor == null || (!monitor.isCanceled()) && isActive())) {
- getContextManager().notifyContextStop(monitor);
- instance.close();
- }
- }
- });
- }
-
- private void close() {
- isConnected = false;
- cdmSource = null;
- }
-
- static void setInstance(ICdmApplicationConfiguration applicationController,
- ICdmSource cdmSource) {
- instance = new CdmStore(applicationController, cdmSource);
- }
-
- private CdmStore(ICdmApplicationConfiguration applicationController,
- ICdmSource cdmSource) {
- this.applicationConfiguration = applicationController;
- this.cdmSource = cdmSource;
- isConnected = true;
- }
-
- /**
- * All calls to the datastore require
- *
- * @return
- */
- private ICdmApplicationConfiguration getApplicationConfiguration() {
- try {
- return applicationConfiguration;
- } catch (Exception e) {
- MessagingUtils.error(CdmStore.class, e);
- }
- return null;
- }
-
- /**
- * <p>
- * getCurrentApplicationController
- * </p>
- *
- * @return a
- * {@link eu.etaxonomy.cdm.remote.api.application.CdmApplicationController}
- * object.
- */
- public static ICdmApplicationConfiguration getCurrentApplicationConfiguration() {
- if (getDefault() != null) {
- return getDefault().getApplicationConfiguration();
- }
- return null;
- }
-
- /*
- * CONVERSATIONS
- */
-
- /**
- * Creates a new conversation, binds resources to the conversation and start
- * a transaction for this conversation.
- *
- * @return a {@link eu.etaxonomy.cdm.api.conversation.ConversationHolder}
- * object.
- */
- public static ConversationHolder createConversation() {
- ConversationHolder conversation = getCurrentApplicationConfiguration()
- .NewConversation();
- try{
- conversation.startTransaction();
- }catch(Exception e){
- MessagingUtils.messageDialog("No database connection", CdmStore.class, "No database connection available", e);
- }
- return conversation;
- }
-
- /**
- * Generic method that will scan the getters of {@link ICdmApplicationConfiguration} for the given service
- * interface. If a matching getter is found the according service implementation is returned by
- * invoking the getter otherwise the method returns <code>null</code>.
- *
- * @param <T>
- * @param serviceClass
- * @return the configured implementation of <code>serviceClass</code> or <code>null</code>
- */
- public static <T extends IService> T getService(Class<T> serviceClass) {
- ICdmApplicationConfiguration configuration = getCurrentApplicationConfiguration();
-
- Method[] methods = ICdmApplicationConfiguration.class.getDeclaredMethods();
-
- T service = null;
-
- for (Method method : methods) {
- Type type = method.getGenericReturnType();
-
- if (type.equals(serviceClass)) {
- try {
- service = (T) method.invoke(configuration, null);
- break;
- } catch (IllegalArgumentException e) {
- MessagingUtils.error(CdmStore.class, e);
- } catch (IllegalAccessException e) {
- MessagingUtils.error(CdmStore.class, e);
- } catch (InvocationTargetException e) {
- MessagingUtils.error(CdmStore.class, e);
- }
- }
- }
-
- return service;
- }
-
- /**
- * @see #getService(Class)
- * As ICommonService is not extending IService we need a specific request here
- */
- public static ICommonService getCommonService() {
- ICdmApplicationConfiguration configuration = getCurrentApplicationConfiguration();
-
- return configuration.getCommonService();
-
- }
-
- /**
- * <p>
- * getAuthenticationManager
- * </p>
- *
- * @return a
- * {@link org.springframework.security.authentication.ProviderManager}
- * object.
- */
- public static ProviderManager getAuthenticationManager() {
- return getCurrentApplicationConfiguration().getAuthenticationManager();
- }
-
- /**
- * <p>
- * getAuthenticationManager
- * </p>
- *
- * @return a
- * {@link ICdmPermissionEvaluator} object.
- */
- public static ICdmPermissionEvaluator getPermissionEvaluator() {
- return getCurrentApplicationConfiguration().getPermissionEvaluator();
- }
-
- /**
- * <p>
- * getGeoService
- * </p>
- *
- * @return a {@link eu.etaxonomy.cdm.ext.geo.IEditGeoService} object.
- */
- public static IEditGeoService getGeoService() {
- return (IEditGeoService) getCurrentApplicationConfiguration().getBean(
- "editGeoService");
- }
-
- /*
- * SECURITY RELATED CONVENIENCE METHODS
- */
-
- /**
- * @see org.springframework.security.access.PermissionEvaluator#hasPermission(org.springframework.security.core.Authentication, java.lang.Object, java.lang.Object)
+ private static final Resource DEFAULT_APPLICATION_CONTEXT = new ClassPathResource(
+ "/eu/etaxonomy/cdm/editorApplicationContext.xml",
+ TaxeditorStorePlugin.class);
+ private static final DbSchemaValidation DEFAULT_DB_SCHEMA_VALIDATION = DbSchemaValidation.VALIDATE;
+
+ private static CdmStore instance;
+
+ //private final ICdmApplicationConfiguration applicationConfiguration;
+
+ private static ContextManager contextManager = new ContextManager();
+
+ private static LoginManager loginManager = new LoginManager();
+
+ private static TermManager termManager = new TermManager();
+
+ private static SearchManager searchManager = new SearchManager();
+
+ private static EditorManager editorManager = new EditorManager();
+
+ private static UseObjectStore useObjectInitializer = new UseObjectStore();
+
+ private static CdmStoreConnector job;
+
+ private Language language;
+
+ private ICdmSource cdmSource;
+
+ private boolean isConnected;
+
+
+
+ /**
+ * <p>
+ * getDefault
+ * </p>
+ *
+ * @return a {@link eu.etaxonomy.taxeditor.store.CdmStore} object.
+ */
+ protected static CdmStore getDefault() {
+ if (instance != null && instance.isConnected) {
+ return instance;
+ } else{// if (instance == null || !instance.isConnected) {
+
+ MessagingUtils.noDataSourceWarningDialog(instance);
+
+ AbstractUtility.showView(CdmDataSourceViewPart.ID);
+ return null;
+ }
+ }
+
+ /**
+ * Initialize the with the last edited datasource
+ */
+ public static void connect() {
+
+ ICdmSource cdmSource;
+ try {
+
+ cdmSource = CdmDataSourceRepository.getCurrentCdmSource();
+ connect(cdmSource);
+ } catch (Exception e) {
+ MessagingUtils.messageDialog("Connection to CDM Source Failed", CdmStore.class, "Could not connect to target CDM Source", e);
+ }
+
+
+ }
+
+ /**
+ * Initialize with a specific datasource
+ *
+ * @param datasource
+ * a {@link eu.etaxonomy.cdm.database.ICdmDataSource} object.
+ */
+ public static void connect(ICdmSource cdmSource) {
+ connect(cdmSource, DEFAULT_DB_SCHEMA_VALIDATION,
+ DEFAULT_APPLICATION_CONTEXT);
+ }
+
+ public static void connect(ICdmSource cdmSource, RemotingLoginDialog loginDialog) {
+ connect(cdmSource,
+ DEFAULT_DB_SCHEMA_VALIDATION,
+ DEFAULT_APPLICATION_CONTEXT,
+ loginDialog);
+ }
+
+ /**
+ * Initialize and provide
+ *
+ * @param datasource
+ * @param dbSchemaValidation
+ * @param applicationContextBean
+ */
+ private static void connect(final ICdmSource cdmSource,
+ final DbSchemaValidation dbSchemaValidation,
+ final Resource applicationContextBean) {
+
+ MessagingUtils.info("Connecting to datasource: " + cdmSource);
+
+ job = new CdmStoreConnector(Display.getDefault(), cdmSource,
+ dbSchemaValidation, applicationContextBean);
+ job.setUser(true);
+ job.setPriority(Job.BUILD);
+ job.schedule();
+
+ }
+
+ private static void connect(final ICdmSource cdmSource,
+ final DbSchemaValidation dbSchemaValidation,
+ final Resource applicationContextBean,
+ RemotingLoginDialog remotingLoginDialog) {
+ RemotingLoginDialog loginDialog = remotingLoginDialog;
+ if(isActive()) {
+ // before we connect we clear the entity caches and the sessions
+ CdmRemoteCacheManager.removeEntityCaches();
+ if(getCurrentSessionManager() != null) {
+ getCurrentSessionManager().disposeAll();
+ }
+ }
+ MessagingUtils.info("Connecting to datasource: " + cdmSource);
+
+ job = new CdmStoreConnector(Display.getDefault(),
+ cdmSource,
+ dbSchemaValidation,
+ applicationContextBean);
+ job.start(loginDialog);
+
+ }
+
+ public static boolean isConnecting() {
+ return job != null && job.getState() == Job.RUNNING;
+ }
+
+ /**
+ * Closes the current application context
+ *
+ * @param monitor
+ * a {@link org.eclipse.core.runtime.IProgressMonitor} object.
+ */
+ public static void close(final IProgressMonitor monitor) {
+ Display.getDefault().asyncExec(new Runnable() {
+ /*
+ * (non-Javadoc)
+ *
+ * @see java.lang.Runnable#run()
+ */
+ @Override
+ public void run() {
+ getContextManager().notifyContextAboutToStop(monitor);
+ if ((monitor == null || (!monitor.isCanceled()) && isActive())) {
+ getContextManager().notifyContextStop(monitor);
+ instance.close();
+ }
+ }
+ });
+ }
+
+ public static void close(IProgressMonitor monitor, boolean async) {
+ if(async) {
+ close(monitor);
+ } else {
+ getContextManager().notifyContextAboutToStop(monitor);
+ if ((monitor == null || (!monitor.isCanceled()) && isActive())) {
+ getContextManager().notifyContextStop(monitor);
+ instance.close();
+ }
+ }
+
+ }
+ private void close() {
+ isConnected = false;
+ cdmSource = null;
+ CdmApplicationState.dispose();
+ }
+
+ static void setInstance(ICdmApplicationConfiguration applicationController,
+ ICdmSource cdmSource) {
+ instance = new CdmStore(applicationController, cdmSource);
+ if(getCurrentSessionManager().isRemoting()) {
+ CdmApplicationState.setCdmServiceCacher(new CdmServiceCacher());
+ }
+ }
+
+ private CdmStore(ICdmApplicationConfiguration applicationController,
+ ICdmSource cdmSource) {
+ CdmApplicationState.setCurrentAppConfig(applicationController);
+ CdmApplicationState.setCurrentDataChangeService(new CdmUIDataChangeService());
+ this.cdmSource = cdmSource;
+ isConnected = true;
+ }
+
+ /**
+ * All calls to the datastore require
+ *
+ * @return
+ */
+ private ICdmApplicationConfiguration getApplicationConfiguration() {
+ try {
+ return CdmApplicationState.getCurrentAppConfig();
+ } catch (Exception e) {
+ MessagingUtils.error(CdmStore.class, e);
+ }
+ return null;
+ }
+
+ /**
+ * <p>
+ * getCurrentApplicationController
+ * </p>
+ *
+ * @return a
+ * {@link eu.etaxonomy.cdm.remote.api.application.CdmApplicationController}
+ * object.
+ */
+ public static ICdmApplicationConfiguration getCurrentApplicationConfiguration() {
+ if (getDefault() != null) {
+ return getDefault().getApplicationConfiguration();
+ }
+ return null;
+ }
+
+ /*
+ * CONVERSATIONS
+ */
+
+ /**
+ * Creates a new conversation, binds resources to the conversation and start
+ * a transaction for this conversation.
+ *
+ * @return a {@link eu.etaxonomy.cdm.api.conversation.ConversationHolder}
+ * object.
+ */
+ public static ConversationHolder createConversation() {
+ ConversationHolder conversation = getCurrentApplicationConfiguration()
+ .NewConversation();
+ try {
+ conversation.startTransaction();
+ }catch(Exception e){
+ MessagingUtils.messageDialog("No database connection", CdmStore.class, "No database connection available", e);
+ }
+ return conversation;
+ }
+
+ //FIXME:Remoting should be removed after moving completely to remoting
+ private MockCdmEntitySessionManager mockCdmEntitySessionManager;
+
+ private ICdmEntitySessionManager getSessionManager() {
+ //FIXME:Remoting we should only have CdmApplicationRemoteConfiguration after move to remoting
+ // bad hack which should be finally removed
+ if(getCurrentApplicationConfiguration() instanceof CdmApplicationRemoteController) {
+ return ((CdmApplicationRemoteController)getCurrentApplicationConfiguration()).getCdmEntitySessionManager();
+ } else {
+ if(mockCdmEntitySessionManager == null) {
+ mockCdmEntitySessionManager = new MockCdmEntitySessionManager();
+ }
+ return mockCdmEntitySessionManager;
+ }
+ }
+
+ public static ICdmEntitySessionManager getCurrentSessionManager() {
+ if (getDefault() != null) {
+ return getDefault().getSessionManager();
+ }
+ return null;
+
+ }
+
+ /**
+ * Generic method that will scan the getters of {@link ICdmApplicationConfiguration} for the given service
+ * interface. If a matching getter is found the according service implementation is returned by
+ * invoking the getter otherwise the method returns <code>null</code>.
+ *
+ * @param <T>
+ * @param serviceClass
+ * @return the configured implementation of <code>serviceClass</code> or <code>null</code>
+ */
+ public static <T extends IService> T getService(Class<T> serviceClass) {
+ T service = null;
+ try {
+ service = CdmApplicationState.getService(serviceClass);
+ } catch (CdmApplicationException cae) {
+ MessagingUtils.error(CdmStore.class, cae);
+ }
+
+ return service;
+ }
+
+ /**
+ * @see #getService(Class)
+ * As ICommonService is not extending IService we need a specific request here
+ */
+ public static ICommonService getCommonService() {
+ return CdmApplicationState.getCommonService();
+
+ }
+
+ /**
+ * <p>
+ * getAuthenticationManager
+ * </p>
+ *
+ * @return a
+ * {@link org.springframework.security.authentication.ProviderManager}
+ * object.
+ */
+ public static AuthenticationManager getAuthenticationManager() {
+ return getCurrentApplicationConfiguration().getAuthenticationManager();
+ }
+
+ /**
+ * <p>
+ * getAuthenticationManager
+ * </p>
*
- * @param targetDomainObject
- * @param permission
- * @return
- */
- public static boolean currentAuthentiationHasPermission(CdmBase targetDomainObject, EnumSet<CRUD> permission){
- //TODO use getCurrentApplicationConfiguration().currentAuthentiationHasPermission(CdmBase targetDomainObject, Operation permission) instead
- SecurityContext context = SecurityContextHolder.getContext();
- PermissionEvaluator pe = getPermissionEvaluator();
- boolean hasPermission = false;
- try {
+ * @return a
+ * {@link ICdmPermissionEvaluator} object.
+ */
+ public static ICdmPermissionEvaluator getPermissionEvaluator() {
+ return getCurrentApplicationConfiguration().getPermissionEvaluator();
+ }
+
+
+ /*
+ * SECURITY RELATED CONVENIENCE METHODS
+ */
+
+ /**
+ * @see org.springframework.security.access.PermissionEvaluator#hasPermission(org.springframework.security.core.Authentication, java.lang.Object, java.lang.Object)
+ *
+ * @param targetDomainObject
+ * @param permission
+ * @return
+ */
+ public static boolean currentAuthentiationHasPermission(CdmBase targetDomainObject, EnumSet<CRUD> permission){
+ //TODO use getCurrentApplicationConfiguration().currentAuthentiationHasPermission(CdmBase targetDomainObject, Operation permission) instead
+ SecurityContext context = SecurityContextHolder.getContext();
+ PermissionEvaluator pe = getPermissionEvaluator();
+ boolean hasPermission = false;
+ try {
hasPermission = getPermissionEvaluator().hasPermission(context.getAuthentication(), targetDomainObject,
permission);
} catch (org.springframework.security.access.AccessDeniedException e) {
/* IGNORE */
}
return hasPermission;
- }
+ }
- /**
- * @see org.springframework.security.access.PermissionEvaluator#hasPermission(org.springframework.security.core.Authentication, java.lang.Object, java.lang.Object)
+ /**
+ * @see org.springframework.security.access.PermissionEvaluator#hasPermission(org.springframework.security.core.Authentication, java.lang.Object, java.lang.Object)
*
- * @param targetDomainObject
- * @param permission
- * @return
- */
- public static boolean currentAuthentiationHasPermission(Class<? extends CdmBase> targetType, EnumSet<CRUD> permission){
- boolean hasPermission = false;
+ * @param targetDomainObject
+ * @param permission
+ * @return
+ */
+ public static boolean currentAuthentiationHasPermission(Class<? extends CdmBase> targetType, EnumSet<CRUD> permission){
+ boolean hasPermission = false;
try {
hasPermission = getPermissionEvaluator().hasPermission(getCurrentAuthentiation(), null, targetType.getName(), permission);
} catch (org.springframework.security.access.AccessDeniedException e) {
/* IGNORE */
}
return hasPermission;
- }
+ }
- public static boolean currentAuthentiationHasOneOfRoles(Role ... roles){
- boolean hasPermission = false;
+ public static boolean currentAuthentiationHasOneOfRoles(Role ... roles){
+ boolean hasPermission = false;
try {
hasPermission = getPermissionEvaluator().hasOneOfRoles(getCurrentAuthentiation(), roles);
} catch (org.springframework.security.access.AccessDeniedException e) {
/* IGNORE */
}
return hasPermission;
- }
-
- public static Authentication getCurrentAuthentiation() {
- SecurityContext context = SecurityContextHolder.getContext();
- return context.getAuthentication();
- }
-
- /*
- * LANGUAGE
- */
-
- /**
- * Provides access to the global default language set in the application preferences.
- *
- * @return a {@link eu.etaxonomy.cdm.model.common.Language} object.
- */
- public static Language getDefaultLanguage() {
- if (getDefault().getLanguage() == null) {
- getDefault().setLanguage(PreferencesUtil.getGlobalLanguage());
- }
- return getDefault().getLanguage();
- }
-
- /**
- * setDefaultLanguage
- * </p>
- *
- * @param language
- * a {@link eu.etaxonomy.cdm.model.common.Language} object.
- */
- public static void setDefaultLanguage(Language language) {
- getDefault().setLanguage(language);
- }
-
- /**
- * @return the language
- */
- private Language getLanguage() {
- return language;
- }
-
- /**
- * @param language
- * the language to set
- */
- private void setLanguage(Language language) {
- this.language = language;
- }
-
- /*
- * LOGIN
- */
-
- /**
- * Getter for the field <code>loginManager</code>.
- * </p>
- *
- * @return a {@link eu.etaxonomy.taxeditor.store.LoginManager} object.
- */
- public static LoginManager getLoginManager() {
- return loginManager;
- }
-
- /**
- * Getter for the field <code>contextManager</code>.
- * </p>
- *
- * @return a {@link eu.etaxonomy.taxeditor.store.ContextManager} object.
- */
- public static ContextManager getContextManager() {
- return contextManager;
- }
-
- public static TermManager getTermManager() {
- return termManager;
- }
-
- public static SearchManager getSearchManager() {
- return searchManager;
- }
-
- public static EditorManager getEditorManager() {
- return editorManager;
- }
-
- /*
- * IMPORT/EXPORT FACTORIES
- */
-
- /**
- * Getter for the field <code>importHandler</code>.
- * </p>
- *
- * @return a {@link eu.etaxonomy.taxeditor.io.ImportManager} object.
- */
- public static ImportManager getImportManager() {
- return ImportManager.NewInstance(getCurrentApplicationConfiguration());
- }
-
- /**
- * Getter for the field <code>exportHandler</code>.
- * </p>
- *
- * @return a {@link eu.etaxonomy.taxeditor.io.ExportManager} object.
- */
- public static ExportManager getExportManager() {
- return ExportManager.NewInstance(getCurrentApplicationConfiguration());
- }
-
- /**
- * Whether this CdmStore is currently connected to a datasource
- *
- * @return a boolean.
- */
- public static boolean isActive() {
- return instance != null && instance.isConnected;
- }
-
- public static ICdmSource getActiveCdmSource() {
- if (isActive()) {
- return instance.getCdmSource();
- }
- return null;
- }
-
- /**
- * getDataSource
- * </p>
- *
- * @return a {@link eu.etaxonomy.cdm.database.ICdmDataSource} object.
- * @deprecated currently retained for backward compatibility - use {@link getActiveCdmSource()} instead
- */
-// public static ICdmDataSource getDataSource() {
-// if (isActive()) {
-// return (ICdmDataSource)instance.getCdmSource();
-// }
-// return null;
-// }
-
- /**
- * @return
- */
- private ICdmSource getCdmSource() {
- return cdmSource;
- }
+ }
+
+ public static Authentication getCurrentAuthentiation() {
+ SecurityContext context = SecurityContextHolder.getContext();
+ return context.getAuthentication();
+ }
+
+ /*
+ * LANGUAGE
+ */
+
+ /**
+ * Provides access to the global default language set in the application preferences.
+ *
+ * @return a {@link eu.etaxonomy.cdm.model.common.Language} object.
+ */
+ public static Language getDefaultLanguage() {
+ if (getDefault().getLanguage() == null) {
+ getDefault().setLanguage(PreferencesUtil.getGlobalLanguage());
+ }
+ return getDefault().getLanguage();
+ }
+
+ /**
+ * <p>
+ * setDefaultLanguage
+ * </p>
+ *
+ * @param language
+ * a {@link eu.etaxonomy.cdm.model.common.Language} object.
+ */
+ public static void setDefaultLanguage(Language language) {
+ getDefault().setLanguage(language);
+ }
+
+ /**
+ * @return the language
+ */
+ private Language getLanguage() {
+ return language;
+ }
+
+ /**
+ * @param language
+ * the language to set
+ */
+ private void setLanguage(Language language) {
+ this.language = language;
+ }
+
+ /*
+ * LOGIN
+ */
+
+ /**
+ * <p>
+ * Getter for the field <code>loginManager</code>.
+ * </p>
+ *
+ * @return a {@link eu.etaxonomy.taxeditor.store.LoginManager} object.
+ */
+ public static LoginManager getLoginManager() {
+ return loginManager;
+ }
+
+ /**
+ * <p>
+ * Getter for the field <code>contextManager</code>.
+ * </p>
+ *
+ * @return a {@link eu.etaxonomy.taxeditor.store.ContextManager} object.
+ */
+ public static ContextManager getContextManager() {
+ return contextManager;
+ }
+
+ public static TermManager getTermManager() {
+ return termManager;
+ }
+
+ public static SearchManager getSearchManager() {
+ return searchManager;
+ }
+
+ public static EditorManager getEditorManager() {
+ return editorManager;
+ }
+
+ /*
+ * IMPORT/EXPORT FACTORIES
+ */
+
+ /**
+ * <p>
+ * Getter for the field <code>importHandler</code>.
+ * </p>
+ *
+ * @return a {@link eu.etaxonomy.taxeditor.io.ImportManager} object.
+ */
+ public static ImportManager getImportManager() {
+ return ImportManager.NewInstance(getCurrentApplicationConfiguration());
+ }
+
+ /**
+ * <p>
+ * Getter for the field <code>exportHandler</code>.
+ * </p>
+ *
+ * @return a {@link eu.etaxonomy.taxeditor.io.ExportManager} object.
+ */
+ public static ExportManager getExportManager() {
+ return ExportManager.NewInstance(getCurrentApplicationConfiguration());
+ }
+
+ /**
+ * Whether this CdmStore is currently connected to a datasource
+ *
+ * @return a boolean.
+ */
+ public static boolean isActive() {
+ return instance != null && instance.isConnected;
+ }
+
+ public static ICdmSource getActiveCdmSource() {
+ if (isActive()) {
+ return instance.getCdmSource();
+ }
+ return null;
+ }
+
+ /**
+ * <p>
+ * getDataSource
+ * </p>
+ *
+ * @return a {@link eu.etaxonomy.cdm.database.ICdmDataSource} object.
+ * @deprecated currently retained for backward compatibility - use {@link getActiveCdmSource()} instead
+ */
+ // public static ICdmDataSource getDataSource() {
+ // if (isActive()) {
+ // return (ICdmDataSource)instance.getCdmSource();
+ // }
+ // return null;
+ // }
+
+ /**
+ * @return
+ */
+ private ICdmSource getCdmSource() {
+ return cdmSource;
+ }
}
package eu.etaxonomy.taxeditor.store;
+import java.lang.reflect.InvocationTargetException;
import java.sql.SQLException;
import java.util.concurrent.CancellationException;
import org.eclipse.core.runtime.IStatus;
import org.eclipse.core.runtime.Status;
import org.eclipse.core.runtime.jobs.Job;
+import org.eclipse.jface.dialogs.ProgressMonitorDialog;
+import org.eclipse.jface.operation.IRunnableWithProgress;
import org.eclipse.swt.widgets.Display;
import org.springframework.core.io.Resource;
import eu.etaxonomy.cdm.database.DbSchemaValidation;
import eu.etaxonomy.cdm.database.ICdmDataSource;
import eu.etaxonomy.cdm.model.metadata.CdmMetaData;
-import eu.etaxonomy.cdm.remote.ICdmRemoteSource;
+import eu.etaxonomy.cdm.model.name.Rank;
import eu.etaxonomy.taxeditor.model.CdmProgressMonitorAdapter;
import eu.etaxonomy.taxeditor.model.MessagingUtils;
+import eu.etaxonomy.taxeditor.remoting.source.ICdmRemoteSource;
import eu.etaxonomy.taxeditor.ui.dialog.LoginDialog;
+import eu.etaxonomy.taxeditor.ui.dialog.RemotingLoginDialog;
import eu.etaxonomy.taxeditor.view.datasource.CdmDataSourceViewPart;
+
/**
* @author n.hoffmann
* @created Dec 8, 2010
* @version 1.0
*/
class CdmStoreConnector extends Job {
- private final Display display;
- private final ICdmSource cdmSource;
- private DbSchemaValidation dbSchemaValidation;
- private final Resource applicationContextBean;
-
- /**
- * @param datasource
- * @param dbSchemaValidation
- * @param applicationContextBean
- */
- public CdmStoreConnector(Display display, ICdmSource cdmSource,
- DbSchemaValidation dbSchemaValidation,
- Resource applicationContextBean) {
- super("Connecting to datasource: " + cdmSource);
- this.display = display;
- this.cdmSource = cdmSource;
- this.dbSchemaValidation = dbSchemaValidation;
- this.applicationContextBean = applicationContextBean;
- }
-
- @Override
- public IStatus run(final IProgressMonitor monitor) {
-
- monitor.beginTask(getConnectionMessage(), 10);
-
- // check if database is up and running
- checkDatabaseReachable(monitor);
-
- if (!monitor.isCanceled()) {
- // check if the datasource actually holds data
- checkIsNonEmptyCdmDatabase(monitor);
- }
-
- if (dbSchemaValidation != DbSchemaValidation.CREATE
- && !monitor.isCanceled()) {
- // if we do not create the datasource, we want to check if the
- // datasource is compatible with this editor
- checkDbSchemaVersionCompatibility(monitor);
- }
-
- // we are done with our low level checking and will free resources now
- cdmSource.closeOpenConnections();
-
- if (!monitor.isCanceled()) {
- CdmStore.close(monitor);
- }
-
- ICdmApplicationConfiguration applicationController = null;
-
- if (!monitor.isCanceled()) {
- CdmProgressMonitorAdapter subprogressMonitor = CdmProgressMonitorAdapter
- .CreateSubMonitor(monitor, 7);
- // This is where we instantiate the application controller
- int oldPriority = Thread.currentThread().getPriority();
- try {
- Thread.currentThread().setPriority(10);
- applicationController = getApplicationController(cdmSource,subprogressMonitor);
- } catch (Exception e) {
- if(! causeIsCancelationExceptionRecursive(e)){
- return new Status(IStatus.ERROR, "Could not connect to CDM Store", "An error occurred while trying to connect to datasource: " + cdmSource.getName(), e);
- }
- } finally {
- monitor.done();
- Thread.currentThread().setPriority(oldPriority);
- }
- }
-
-
-
- if (!monitor.isCanceled()) {
- CdmStore.setInstance(applicationController, cdmSource);
-
- display.asyncExec(new Runnable() {
- /*
- * (non-Javadoc)
- *
- * @see java.lang.Runnable#run()
- */
- @Override
- public void run() {
- authenticate();
-
- startContext();
- }
- });
-
- MessagingUtils.info("Application context initialized.");
- return Status.OK_STATUS;
- } else {
- // Show datasource view if not shown yet
- display.asyncExec(new Runnable() {
- /*
- * (non-Javadoc)
- *
- * @see java.lang.Runnable#run()
- */
- @Override
- public void run() {
- StoreUtil.showView(CdmDataSourceViewPart.ID);
- }
- });
- return Status.CANCEL_STATUS;
- }
-
- }
-
- private ICdmApplicationConfiguration getApplicationController(ICdmSource cdmSource, CdmProgressMonitorAdapter subprogressMonitor) {
- if(cdmSource instanceof ICdmDataSource) {
- return CdmApplicationController.NewInstance(applicationContextBean,
- (ICdmDataSource)cdmSource,
- dbSchemaValidation,
- false,
- subprogressMonitor);
- } else if(cdmSource instanceof ICdmRemoteSource) {
- return CdmApplicationRemoteController.NewInstance((ICdmRemoteSource)cdmSource,
- false,
- subprogressMonitor,
- null);
- } else {
- throw new UnsupportedOperationException("Cannot create application controller for " + cdmSource.getName());
- }
- }
- private void authenticate() {
- LoginDialog loginDialog = new LoginDialog(StoreUtil.getShell());
- loginDialog.open();
- }
-
- private void startContext() {
- CdmStore.getContextManager().notifyContextStart();
- }
-
- /**
- * @return
- */
- private String getConnectionMessage() {
- return cdmSource.getConnectionMessage();
- }
-
- /**
- * @return
- * @throws SQLException
- */
- private void checkDbSchemaVersionCompatibility(IProgressMonitor monitor) {
- monitor.subTask("Checking if datasource is compatible with this editor.");
- String dbSchemaVersion;
-
- String message = null;
- try {
- dbSchemaVersion = cdmSource.getDbSchemaVersion();
- // we assume that empty dbSchemaVersion means an empty database and
- // skip version checking
-
- if(dbSchemaVersion != null) {
- int compareVersion = CdmMetaData.compareVersion(dbSchemaVersion, CdmMetaData.getDbSchemaVersion(), 3, null);
- // if the datasource version is greater than the taxeditor compatible version then the taxeditor needs to
- // be updated else the datasource needs to be updated
- if(compareVersion > 0) {
- message = "Please update the Taxonomic Editor (Help->Check for Updates) or choose a compatible datasource";
- } else if (compareVersion < 0) {
- message = "Please update the chosen datasource or choose a new data source to connect to in the Datasource View.";
- }
- }
- monitor.worked(1);
- } catch (CdmSourceException e) {
- //
- }
-
- if (message != null) {
- // Show an error message
- MessagingUtils
- .messageDialog(
- "Datasource Compatibility Check failed",
- this,
- "The database schema for the chosen "
- + "datasource '"
- + cdmSource
- + "' \n is not compatible for this version of the taxonomic editor. \n\n"
- + message,
- null);
-
- monitor.setCanceled(true);
- }
-
- }
-
- private void checkIsNonEmptyCdmDatabase(IProgressMonitor monitor) {
- monitor.subTask("Checking if datasource is a non empty CDM database.");
- boolean isDbEmpty = false;
- try {
- isDbEmpty = cdmSource.isDbEmpty();
- } catch (CdmSourceException e) {
- isDbEmpty = true;
- }
- if(isDbEmpty) {
- dbSchemaValidation = DbSchemaValidation.CREATE;
- }
- }
-
- private boolean causeIsCancelationExceptionRecursive(Throwable throwable){
- if(throwable == null){
- return false;
- }else if(throwable instanceof CancellationException){
- return true;
- }else{
- return causeIsCancelationExceptionRecursive(throwable.getCause());
- }
- }
-
- private void checkDatabaseReachable(IProgressMonitor monitor) {
- try {
- monitor.subTask("Checking if datasource is reachable.");
- cdmSource.checkConnection();
- monitor.worked(1);
- } catch (CdmSourceException e) {
- MessagingUtils.messageDialog("Could not connect to chosen datasource",
- this, "Reason: " + e.getMessage(), e);
- monitor.setCanceled(true);
- }
- }
+ private final Display display;
+ private final ICdmSource cdmSource;
+ private DbSchemaValidation dbSchemaValidation;
+ private final Resource applicationContextBean;
+
+
+ /**
+ * @param datasource
+ * @param dbSchemaValidation
+ * @param applicationContextBean
+ */
+ public CdmStoreConnector(Display display,
+ ICdmSource cdmSource,
+ DbSchemaValidation dbSchemaValidation,
+ Resource applicationContextBean) {
+ super("Connecting to datasource: " + cdmSource);
+ this.display = display;
+ this.cdmSource = cdmSource;
+ this.dbSchemaValidation = dbSchemaValidation;
+ this.applicationContextBean = applicationContextBean;
+ }
+
+
+
+ @Override
+ public IStatus run(final IProgressMonitor monitor) {
+
+ monitor.beginTask(getConnectionMessage(), 10);
+
+ // check if database is up and running
+ checkDatabaseReachable(monitor);
+
+ if (!monitor.isCanceled()) {
+ // check if the datasource actually holds data
+ checkIsNonEmptyCdmDatabase(monitor);
+ }
+
+ if (dbSchemaValidation != DbSchemaValidation.CREATE
+ && !monitor.isCanceled()) {
+ // if we do not create the datasource, we want to check if the
+ // datasource is compatible with this editor
+ checkDbSchemaVersionCompatibility(monitor);
+ }
+
+ // we are done with our low level checking and will free resources now
+ cdmSource.closeOpenConnections();
+
+ if (!monitor.isCanceled()) {
+ CdmStore.close(monitor);
+ }
+
+ ICdmApplicationConfiguration applicationController = null;
+
+ if (!monitor.isCanceled()) {
+ CdmProgressMonitorAdapter subprogressMonitor = CdmProgressMonitorAdapter
+ .CreateSubMonitor(monitor, 7);
+ // This is where we instantiate the application controller
+ int oldPriority = Thread.currentThread().getPriority();
+ try {
+ Thread.currentThread().setPriority(10);
+ applicationController = getApplicationController(cdmSource,subprogressMonitor);
+ } catch (Exception e) {
+ if(! causeIsCancelationExceptionRecursive(e)){
+ return new Status(IStatus.ERROR, "Could not connect to CDM Store", "An error occurred while trying to connect to datasource: " + cdmSource.getName(), e);
+ }
+ } finally {
+ monitor.done();
+ Thread.currentThread().setPriority(oldPriority);
+ }
+ }
+
+
+
+ if (!monitor.isCanceled()) {
+ CdmStore.setInstance(applicationController, cdmSource);
+
+ display.asyncExec(new Runnable() {
+ /*
+ * (non-Javadoc)
+ *
+ * @see java.lang.Runnable#run()
+ */
+ @Override
+ public void run() {
+ authenticate();
+
+ startContext();
+ }
+ });
+
+ MessagingUtils.info("Application context initialized.");
+ return Status.OK_STATUS;
+ } else {
+ // Show datasource view if not shown yet
+ display.asyncExec(new Runnable() {
+ /*
+ * (non-Javadoc)
+ *
+ * @see java.lang.Runnable#run()
+ */
+ @Override
+ public void run() {
+ StoreUtil.showView(CdmDataSourceViewPart.ID);
+ }
+ });
+ return Status.CANCEL_STATUS;
+ }
+
+ }
+
+ public void start(final RemotingLoginDialog loginDialog) {
+ // hide login dialog and start connection dialog
+ loginDialog.setMessage(null);
+ loginDialog.hide(true);
+
+
+ ProgressMonitorDialog dialog = new ProgressMonitorDialog(StoreUtil.getShell());
+
+ try {
+ dialog.run(true, true, new IRunnableWithProgress() {
+ @Override
+ public void run(final IProgressMonitor monitor) {
+ try {
+ monitor.beginTask(getConnectionMessage(), 7);
+
+ // check if database is up and running
+ checkDatabaseReachable(monitor);
+
+ // check if the datasource actually holds data
+ checkIsNonEmptyCdmDatabase(monitor);
+
+ if (dbSchemaValidation != DbSchemaValidation.CREATE) {
+ // if we do not create the datasource, we want to check if the
+ // datasource is compatible with this editor
+ checkDbSchemaVersionCompatibility(monitor);
+ }
+
+ // we are done with our low level checking and will free resources now
+ cdmSource.closeOpenConnections();
+
+ display.syncExec(new Runnable() {
+ /*
+ * (non-Javadoc)
+ *
+ * @see java.lang.Runnable#run()
+ */
+ @Override
+ public void run() {
+ // close the current context
+ CdmStore.close(monitor, false);
+ }
+ });
+
+ ICdmApplicationConfiguration applicationController = null;
+
+ if (!monitor.isCanceled()) {
+ CdmProgressMonitorAdapter subprogressMonitor = CdmProgressMonitorAdapter
+ .CreateSubMonitor(monitor, 3);
+ // genrerate new application controller
+ applicationController = getApplicationController(cdmSource,subprogressMonitor);
+ }
+
+
+ if (!monitor.isCanceled()) {
+ CdmStore.setInstance(applicationController, cdmSource);
+ monitor.subTask("Authenticating user");
+ display.syncExec(new Runnable() {
+ /*
+ * (non-Javadoc)
+ *
+ * @see java.lang.Runnable#run()
+ */
+ @Override
+ public void run() {
+
+ try {
+ // create new security context
+ CdmStore.getLoginManager().doAuthenticate(loginDialog.getUsername(), loginDialog.getPassword());
+ loginDialog.onComplete();
+ CdmStore.getContextManager().notifyContextStart();
+ Rank.initDefaultTerms();
+ } catch(CdmAuthenticationException cae) {
+ loginDialog.hide(false);
+ loginDialog.setMessage(cae.getMessage());
+ }
+
+ }
+ });
+ } else {
+ throw new RuntimeException("Login cancelled");
+ }
+ } finally {
+ monitor.done();
+ }
+ }
+ });
+ } catch (InvocationTargetException e) {
+ loginDialog.hide(false);
+ loginDialog.setMessage(e.getMessage());
+ } catch (InterruptedException e) {
+ loginDialog.hide(false);
+ loginDialog.setMessage(e.getMessage());
+ }
+ }
+
+
+ private ICdmApplicationConfiguration getApplicationController(ICdmSource cdmSource, CdmProgressMonitorAdapter subprogressMonitor) {
+ if(cdmSource instanceof ICdmDataSource) {
+ return CdmApplicationController.NewInstance(applicationContextBean,
+ (ICdmDataSource)cdmSource,
+ dbSchemaValidation,
+ false,
+ subprogressMonitor);
+ } else if(cdmSource instanceof ICdmRemoteSource) {
+ return CdmApplicationRemoteController.NewInstance((ICdmRemoteSource)cdmSource,
+ subprogressMonitor,
+ null);
+ } else {
+ throw new UnsupportedOperationException("Cannot create application controller for " + cdmSource.getName());
+ }
+ }
+
+ private void authenticate() {
+ LoginDialog saloginDialog = new LoginDialog(StoreUtil.getShell());
+ saloginDialog.open();
+ }
+
+ private void startContext() {
+ CdmStore.getContextManager().notifyContextStart();
+ }
+
+ /**
+ * @return
+ */
+ private String getConnectionMessage() {
+ return cdmSource.getConnectionMessage();
+ }
+
+ /**
+ * @return
+ * @throws SQLException
+ */
+ private void checkDbSchemaVersionCompatibility(IProgressMonitor monitor) {
+ monitor.subTask("Checking if datasource is compatible with this editor.");
+ String dbSchemaVersion;
+
+ String message = null;
+ try {
+ dbSchemaVersion = cdmSource.getDbSchemaVersion();
+ // we assume that empty dbSchemaVersion means an empty database and
+ // skip version checking
+
+ if(dbSchemaVersion != null) {
+ int compareVersion = CdmMetaData.compareVersion(dbSchemaVersion, CdmMetaData.getDbSchemaVersion(), 3, null);
+ // if the datasource version is greater than the taxeditor compatible version then the taxeditor needs to
+ // be updated else the datasource needs to be updated
+ if(compareVersion > 0) {
+ message = "Please update the Taxonomic Editor (Help->Check for Updates) or choose a compatible datasource";
+ } else if (compareVersion < 0) {
+ message = "Please update the chosen datasource or choose a new data source to connect to in the Datasource View.";
+ }
+ }
+ monitor.worked(1);
+ } catch (CdmSourceException e) {
+ //
+ }
+
+ if (message != null) {
+ // Show an error message
+ MessagingUtils
+ .messageDialog(
+ "Datasource Compatibility Check failed",
+ this,
+ "The database schema for the chosen "
+ + "datasource '"
+ + cdmSource
+ + "' \n is not compatible for this version of the taxonomic editor. \n\n"
+ + message,
+ null);
+
+ monitor.setCanceled(true);
+ }
+
+ }
+
+ private void checkIsNonEmptyCdmDatabase(IProgressMonitor monitor) {
+ monitor.subTask("Checking if datasource is a non empty CDM database.");
+ boolean isDbEmpty = false;
+ try {
+ isDbEmpty = cdmSource.isDbEmpty();
+ } catch (CdmSourceException e) {
+ isDbEmpty = true;
+ }
+ if(isDbEmpty) {
+ dbSchemaValidation = DbSchemaValidation.CREATE;
+ }
+ }
+
+ private boolean causeIsCancelationExceptionRecursive(Throwable throwable){
+ if(throwable == null){
+ return false;
+ }else if(throwable instanceof CancellationException){
+ return true;
+ }else{
+ return causeIsCancelationExceptionRecursive(throwable.getCause());
+ }
+ }
+
+ private void checkDatabaseReachable(IProgressMonitor monitor) {
+ try {
+ monitor.subTask("Checking if datasource is reachable.");
+ cdmSource.checkConnection();
+ monitor.worked(1);
+ } catch (CdmSourceException e) {
+ MessagingUtils.messageDialog("Could not connect to chosen datasource",
+ this, "Reason: " + e.getMessage(), e);
+ monitor.setCanceled(true);
+ }
+ }
+
+
}
--- /dev/null
+// $Id$
+/**
+* Copyright (C) 2015 EDIT
+* European Distributed Institute of Taxonomy
+* http://www.e-taxonomy.eu
+*
+* The contents of this file are subject to the Mozilla Public License Version 1.1
+* See LICENSE.TXT at the top of this package for the full license terms.
+*/
+package eu.etaxonomy.taxeditor.store;
+
+import org.eclipse.swt.widgets.Display;
+
+import eu.etaxonomy.cdm.api.application.CdmChangeEvent;
+import eu.etaxonomy.cdm.api.application.CdmDataChangeService;
+import eu.etaxonomy.cdm.api.application.ICdmChangeListener;
+
+/**
+ * @author cmathew
+ * @date 18 Jun 2015
+ *
+ */
+public class CdmUIDataChangeService extends CdmDataChangeService {
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.store.ICdmDataChangeService#fireChangeEvent(eu.etaxonomy.cdm.api.application.CdmChangeEvent, boolean)
+ */
+ @Override
+ public void fireChangeEvent(final CdmChangeEvent event, boolean async) {
+
+ for(final ICdmChangeListener listener : listeners) {
+ // Update the user interface asynchronously
+ if(async) {
+ Display.getDefault().asyncExec(new Runnable() {
+ @Override
+ public void run() {
+ listener.onChange(event);
+ }
+ });
+ } else {
+ // Update the user interface synchronously
+ Display.getDefault().syncExec(new Runnable() {
+ @Override
+ public void run() {
+ listener.onChange(event);
+ }
+ });
+ }
+ }
+ }
+
+}
// $Id$
/**
-* Copyright (C) 2007 EDIT
-* European Distributed Institute of Taxonomy
-* http://www.e-taxonomy.eu
-*
-* The contents of this file are subject to the Mozilla Public License Version 1.1
-* See LICENSE.TXT at the top of this package for the full license terms.
-*/
+ * Copyright (C) 2007 EDIT
+ * European Distributed Institute of Taxonomy
+ * http://www.e-taxonomy.eu
+ *
+ * The contents of this file are subject to the Mozilla Public License Version 1.1
+ * See LICENSE.TXT at the top of this package for the full license terms.
+ */
package eu.etaxonomy.taxeditor.store;
import org.eclipse.ui.IWorkbenchListener;
import org.eclipse.ui.PlatformUI;
import org.eclipse.ui.XMLMemento;
+import org.eclipse.ui.internal.Workbench;
import eu.etaxonomy.taxeditor.model.IContextListener;
import eu.etaxonomy.taxeditor.model.MementoHelper;
* @version 1.0
*/
public class ContextManager implements IWorkbenchListener{
-
- private ListenerList contextListeners = new ListenerList();
-
- private IMemento memento;
-
- /**
- * <p>Constructor for ContextManager.</p>
- */
- protected ContextManager() {
- PlatformUI.getWorkbench().addWorkbenchListener(this);
- }
-
- /**
- * <p>addContextListener</p>
- *
- * @param listener a {@link eu.etaxonomy.taxeditor.model.IContextListener} object.
- */
- public void addContextListener(IContextListener listener){
- contextListeners.add(listener);
- }
-
- /**
- * <p>removeContextListener</p>
- *
- * @param listener a {@link eu.etaxonomy.taxeditor.model.IContextListener} object.
- */
- public void removeContextListener(IContextListener listener) {
- contextListeners.remove(listener);
- }
-
- /**
- * <p>notifyContextStart</p>
- */
- public void notifyContextStart() {
- MessagingUtils.info("Notifying context listeners, that the context has started.");
- ProgressMonitorDialog dialog = new ProgressMonitorDialog(StoreUtil.getShell());
-
- try {
- dialog.run(false, false, new IRunnableWithProgress() {
- /* (non-Javadoc)
- * @see org.eclipse.jface.operation.IRunnableWithProgress#run(org.eclipse.core.runtime.IProgressMonitor)
- */
- @Override
- public void run(IProgressMonitor monitor)
- throws InvocationTargetException, InterruptedException {
- monitor.beginTask("Starting context", contextListeners.size());
-
-
- readMemento();
-
- for(final Object listener : contextListeners.getListeners()){
- ((IContextListener) listener).contextStart(memento, monitor);
- monitor.worked(1);
- }
- monitor.done();
- }
- });
- } catch (InvocationTargetException e) {
- MessagingUtils.error(getClass(), e);
- } catch (InterruptedException e) {
- MessagingUtils.error(getClass(), e);
- }
- }
-
-
- /**
- *
- */
- public void notifyContextRefresh() {
- MessagingUtils.info("Notifying context listeners, that the context needs to be refreshed.");
- ProgressMonitorDialog dialog = new ProgressMonitorDialog(StoreUtil.getShell());
-
- try {
- dialog.run(false, false, new IRunnableWithProgress() {
- /* (non-Javadoc)
- * @see org.eclipse.jface.operation.IRunnableWithProgress#run(org.eclipse.core.runtime.IProgressMonitor)
- */
- @Override
- public void run(IProgressMonitor monitor)
- throws InvocationTargetException, InterruptedException {
- monitor.beginTask("Refreshing context", contextListeners.size());
-
- for(final Object listener : contextListeners.getListeners()){
- ((IContextListener) listener).contextRefresh(monitor);
- monitor.worked(1);
- }
- monitor.done();
- }
- });
- } catch (InvocationTargetException e) {
- MessagingUtils.error(getClass(), e);
- } catch (InterruptedException e) {
- MessagingUtils.error(getClass(), e);
- }
- }
-
- /**
- * <p>notifyContextAboutToStop</p>
- *
- * @param monitor a {@link org.eclipse.core.runtime.IProgressMonitor} object.
- */
- public void notifyContextAboutToStop(final IProgressMonitor monitor){
-
- IProgressMonitor subMonitor = StoreUtil.getSubProgressMonitor(monitor, 1);
-
- subMonitor.beginTask("Stoping context", contextListeners.size());
- // we are creating the memento here; even if the context is not stopped
- createMemento();
-
- for(final Object listener : contextListeners.getListeners()){
- ((IContextListener) listener).contextAboutToStop(memento, subMonitor);
- subMonitor.worked(1);
- }
-
- subMonitor.done();
- }
-
- /**
- * <p>notifyContextStop</p>
- *
- * @param monitor a {@link org.eclipse.core.runtime.IProgressMonitor} object.
- */
- public void notifyContextStop(IProgressMonitor monitor) {
-
- IProgressMonitor subMonitor = StoreUtil.getSubProgressMonitor(monitor, 1);
-
- subMonitor.beginTask("Stoping context", contextListeners.size());
- MessagingUtils.info("Notifying context listeners, that the context has stopped.");
-
- for(Object listener : contextListeners.getListeners()){
- ((IContextListener) listener).contextStop(memento, subMonitor);
- subMonitor.worked(1);
- }
-
- saveMemento();
- subMonitor.done();
- }
-
- /* (non-Javadoc)
- * @see org.eclipse.ui.IWorkbenchListener#preShutdown(org.eclipse.ui.IWorkbench, boolean)
- */
- /** {@inheritDoc} */
- @Override
- public boolean preShutdown(IWorkbench workbench, boolean forced) {
-
- createMemento();
-
- IProgressMonitor monitor = null;
-
- for(Object listener : contextListeners.getListeners()){
- ((IContextListener) listener).workbenchShutdown(memento, monitor);
- }
-
- saveMemento();
-
- // return true in any case, otherwise the application will not stop
- return true;
- }
-
- /* (non-Javadoc)
- * @see org.eclipse.ui.IWorkbenchListener#postShutdown(org.eclipse.ui.IWorkbench)
- */
- /** {@inheritDoc} */
- @Override
- public void postShutdown(IWorkbench workbench) {
-
-
- }
-
-
- private void readMemento(){
- try {
- memento = MementoHelper.readMementoFromFile(getStateFileForCurrentDatabase());
- } catch (FileNotFoundException e) {
- // no memento -> no previous state
- MessagingUtils.info("No state file for datasource");
- }
- }
-
- private void createMemento(){
-
- if (CdmStore.getActiveCdmSource() != null) {
-
- try {
- String name = CdmStore.getActiveCdmSource().getName();
- name = name.trim();
- name = name.replace(" ", "_");
- memento = XMLMemento.createWriteRoot(name);
-
- MessagingUtils.info("DataSource found. Memento created.");
- } catch (Exception e) {
- // The memento could not be created, but a not closable editor is avoided for this case.
- MessagingUtils.error(this.getClass(), "The memento could not be created", e);
- }
- } else {
- MessagingUtils.info("Not storing state data, because no DataSource present.");
- }
-
- }
-
- private boolean saveMemento(){
- return MementoHelper.saveMementoToFile(memento, getStateFileForCurrentDatabase()) != null;
- }
-
- /**
- * <p>getStateFileForCurrentDatabase</p>
- *
- * @return a {@link java.io.File} object.
- */
- protected File getStateFileForCurrentDatabase() {
- if(CdmStore.getActiveCdmSource() == null){
- return null;
- }
-
- IPath path = TaxeditorStorePlugin.getDefault().getStateLocation();
- if (path == null) {
- return null;
- }
- path = path.append("editor_state_" + CdmStore.getActiveCdmSource().getName() + ".xml");
- return path.toFile();
- }
+
+ private final ListenerList contextListeners = new ListenerList();
+
+ private IMemento memento;
+
+ /**
+ * <p>Constructor for ContextManager.</p>
+ */
+ protected ContextManager() {
+ if(Workbench.getInstance() != null) {
+ PlatformUI.getWorkbench().addWorkbenchListener(this);
+ }
+ }
+
+ /**
+ * <p>addContextListener</p>
+ *
+ * @param listener a {@link eu.etaxonomy.taxeditor.model.IContextListener} object.
+ */
+ public void addContextListener(IContextListener listener){
+ contextListeners.add(listener);
+ }
+
+ /**
+ * <p>removeContextListener</p>
+ *
+ * @param listener a {@link eu.etaxonomy.taxeditor.model.IContextListener} object.
+ */
+ public void removeContextListener(IContextListener listener) {
+ contextListeners.remove(listener);
+ }
+
+ public void notifyContextStartWithoutDialog(IProgressMonitor monitor) {
+ MessagingUtils.info("Notifying context listeners, that the context has started.");
+
+ readMemento();
+
+ for(final Object listener : contextListeners.getListeners()){
+ ((IContextListener) listener).contextStart(memento, monitor);
+ }
+ }
+ /**
+ * <p>notifyContextStart</p>
+ */
+ public void notifyContextStart() {
+ MessagingUtils.info("Notifying context listeners, that the context has started.");
+ ProgressMonitorDialog dialog = new ProgressMonitorDialog(StoreUtil.getShell());
+
+ try {
+ dialog.run(false, false, new IRunnableWithProgress() {
+ /* (non-Javadoc)
+ * @see org.eclipse.jface.operation.IRunnableWithProgress#run(org.eclipse.core.runtime.IProgressMonitor)
+ */
+ @Override
+ public void run(IProgressMonitor monitor)
+ throws InvocationTargetException, InterruptedException {
+ monitor.beginTask("Starting context", contextListeners.size());
+
+
+ readMemento();
+
+ for(final Object listener : contextListeners.getListeners()){
+ ((IContextListener) listener).contextStart(memento, monitor);
+ monitor.worked(1);
+ }
+ monitor.done();
+ }
+ });
+ } catch (InvocationTargetException e) {
+ MessagingUtils.error(getClass(), e);
+ } catch (InterruptedException e) {
+ MessagingUtils.error(getClass(), e);
+ }
+ }
+
+
+ /**
+ *
+ */
+ public void notifyContextRefresh() {
+ MessagingUtils.info("Notifying context listeners, that the context needs to be refreshed.");
+ ProgressMonitorDialog dialog = new ProgressMonitorDialog(StoreUtil.getShell());
+
+ try {
+ dialog.run(false, false, new IRunnableWithProgress() {
+ /* (non-Javadoc)
+ * @see org.eclipse.jface.operation.IRunnableWithProgress#run(org.eclipse.core.runtime.IProgressMonitor)
+ */
+ @Override
+ public void run(IProgressMonitor monitor)
+ throws InvocationTargetException, InterruptedException {
+ monitor.beginTask("Refreshing context", contextListeners.size());
+
+ for(final Object listener : contextListeners.getListeners()){
+ ((IContextListener) listener).contextRefresh(monitor);
+ monitor.worked(1);
+ }
+ monitor.done();
+ }
+ });
+ } catch (InvocationTargetException e) {
+ MessagingUtils.error(getClass(), e);
+ } catch (InterruptedException e) {
+ MessagingUtils.error(getClass(), e);
+ }
+ }
+
+ /**
+ * <p>notifyContextAboutToStop</p>
+ *
+ * @param monitor a {@link org.eclipse.core.runtime.IProgressMonitor} object.
+ */
+ public void notifyContextAboutToStop(final IProgressMonitor monitor){
+
+ IProgressMonitor subMonitor = StoreUtil.getSubProgressMonitor(monitor, 1);
+
+ subMonitor.beginTask("Stoping context", contextListeners.size());
+ // we are creating the memento here; even if the context is not stopped
+ createMemento();
+
+ for(final Object listener : contextListeners.getListeners()){
+ ((IContextListener) listener).contextAboutToStop(memento, subMonitor);
+ subMonitor.worked(1);
+ }
+
+ subMonitor.done();
+ }
+
+ /**
+ * <p>notifyContextStop</p>
+ *
+ * @param monitor a {@link org.eclipse.core.runtime.IProgressMonitor} object.
+ */
+ public void notifyContextStop(IProgressMonitor monitor) {
+
+ IProgressMonitor subMonitor = StoreUtil.getSubProgressMonitor(monitor, 1);
+
+ subMonitor.beginTask("Stoping context", contextListeners.size());
+ MessagingUtils.info("Notifying context listeners, that the context has stopped.");
+
+ for(Object listener : contextListeners.getListeners()){
+ ((IContextListener) listener).contextStop(memento, subMonitor);
+ subMonitor.worked(1);
+ }
+
+ saveMemento();
+ subMonitor.done();
+ }
+
+ /* (non-Javadoc)
+ * @see org.eclipse.ui.IWorkbenchListener#preShutdown(org.eclipse.ui.IWorkbench, boolean)
+ */
+ /** {@inheritDoc} */
+ @Override
+ public boolean preShutdown(IWorkbench workbench, boolean forced) {
+
+ createMemento();
+
+ IProgressMonitor monitor = null;
+
+ for(Object listener : contextListeners.getListeners()){
+ ((IContextListener) listener).workbenchShutdown(memento, monitor);
+ }
+
+ saveMemento();
+
+ // return true in any case, otherwise the application will not stop
+ return true;
+ }
+
+ /* (non-Javadoc)
+ * @see org.eclipse.ui.IWorkbenchListener#postShutdown(org.eclipse.ui.IWorkbench)
+ */
+ /** {@inheritDoc} */
+ @Override
+ public void postShutdown(IWorkbench workbench) {
+
+
+ }
+
+
+ private void readMemento(){
+ try {
+ memento = MementoHelper.readMementoFromFile(getStateFileForCurrentDatabase());
+ } catch (FileNotFoundException e) {
+ // no memento -> no previous state
+ MessagingUtils.info("No state file for datasource");
+ }
+ }
+
+ private void createMemento(){
+
+ if (CdmStore.getActiveCdmSource() != null) {
+
+ try {
+ String name = CdmStore.getActiveCdmSource().getName();
+ name = name.trim();
+ name = name.replace(" ", "_");
+ memento = XMLMemento.createWriteRoot(name);
+
+ MessagingUtils.info("DataSource found. Memento created.");
+ } catch (Exception e) {
+ // The memento could not be created, but a not closable editor is avoided for this case.
+ MessagingUtils.error(this.getClass(), "The memento could not be created", e);
+ }
+ } else {
+ MessagingUtils.info("Not storing state data, because no DataSource present.");
+ }
+
+ }
+
+ private boolean saveMemento(){
+ return MementoHelper.saveMementoToFile(memento, getStateFileForCurrentDatabase()) != null;
+ }
+
+ /**
+ * <p>getStateFileForCurrentDatabase</p>
+ *
+ * @return a {@link java.io.File} object.
+ */
+ protected File getStateFileForCurrentDatabase() {
+ if(CdmStore.getActiveCdmSource() == null){
+ return null;
+ }
+
+ IPath path = TaxeditorStorePlugin.getDefault().getStateLocation();
+ if (path == null) {
+ return null;
+ }
+ path = path.append("editor_state_" + CdmStore.getActiveCdmSource().getName() + ".xml");
+ return path.toFile();
+ }
}
import org.springframework.security.core.GrantedAuthority;
import org.springframework.security.core.context.SecurityContextHolder;
+import eu.etaxonomy.cdm.api.application.CdmApplicationState;
import eu.etaxonomy.cdm.api.conversation.ConversationHolder;
import eu.etaxonomy.cdm.api.conversation.IConversationEnabled;
import eu.etaxonomy.cdm.model.common.Group;
*/
public boolean authenticate(String username, String password){
- // close all open editors
- if(!AbstractUtility.closeAll()){
- return false;
- }
-
-
- try{
- SecurityContextHolder.clearContext();
-
- Authentication lastAuthentication = CdmStore.getCurrentAuthentiation();
-
- UsernamePasswordAuthenticationToken token = new UsernamePasswordAuthenticationToken(username, password);
- Authentication authentication = CdmStore.getAuthenticationManager().authenticate(token);
+ // close all open editors
+ if(!AbstractUtility.closeAll()){
+ return false;
+ }
- User user = (User) authentication.getPrincipal();
- /* circumventing problem with hibernate not refreshing the transient collection authorities in this case,
- * see http://dev.e-taxonomy.eu/trac/ticket/4053 */
- user.initAuthorities();
- if(logger.isDebugEnabled()){
- StringBuilder gaText = new StringBuilder();
- String indent = " ";
- Set<GrantedAuthority> gaSet = user.getGrantedAuthorities();
- _logGrantedAuthotities(gaText, indent, gaSet);
- for(Group gr : user.getGroups()){
- gaText.append(indent).append("gr[").append(gr.hashCode()).append("] \"").append(gr.getName()).append("\" ").append(gr.toString()).append("\n");
- _logGrantedAuthotities(gaText, indent + indent, gr.getGrantedAuthorities());
- }
- logger.debug("User authenticated: " + user.getUsername() + "\n" + gaText.toString());
- }
+ try{
+ doAuthenticate(username, password);
+ } catch (CdmAuthenticationException e) {
+ MessagingUtils.warningDialog("Could not authenticate", this, e.getMessage());
+ }
+ return true;
+ }
- SecurityContextHolder.getContext().setAuthentication(authentication);
+ public void doAuthenticate(String username, String password) throws CdmAuthenticationException {
+ try {
+ SecurityContextHolder.clearContext();
+ Authentication lastAuthentication = CdmStore.getCurrentAuthentiation();
+
+ UsernamePasswordAuthenticationToken token = new UsernamePasswordAuthenticationToken(username, password);
+ Authentication authentication = CdmStore.getAuthenticationManager().authenticate(token);
+
+ User user = (User) authentication.getPrincipal();
+ /* circumventing problem with hibernate not refreshing the transient collection authorities in this case,
+ * see http://dev.e-taxonomy.eu/trac/ticket/4053 */
+ user.initAuthorities();
+
+ if(logger.isDebugEnabled()){
+ StringBuilder gaText = new StringBuilder();
+ String indent = " ";
+ Set<GrantedAuthority> gaSet = user.getGrantedAuthorities();
+ _logGrantedAuthotities(gaText, indent, gaSet);
+ for(Group gr : user.getGroups()){
+ gaText.append(indent).append("gr[").append(gr.hashCode()).append("] \"").append(gr.getName()).append("\" ").append(gr.toString()).append("\n");
+ _logGrantedAuthotities(gaText, indent + indent, gr.getGrantedAuthorities());
+ }
+ logger.debug("User authenticated: " + user.getUsername() + "\n" + gaText.toString());
+ }
+
+ authentication = new UsernamePasswordAuthenticationToken(user,password, authentication.getAuthorities());
+ SecurityContextHolder.getContext().setAuthentication(authentication);
+ CdmApplicationState.setCurrentSecurityContext(SecurityContextHolder.getContext());
+
+ if(!authentication.equals(lastAuthentication)){
+ this.setChanged();
+ this.notifyObservers();
+ }
+ } catch(BadCredentialsException e){
+ throw new CdmAuthenticationException("Login and/or Password incorrect", e);
+ } catch(LockedException e){
+ throw new CdmAuthenticationException("Account is locked", e);
+ } catch(IllegalArgumentException e){
+ throw new CdmAuthenticationException("Login and/or Password empty", e);
+ }
- if(!authentication.equals(lastAuthentication)){
- this.setChanged();
- this.notifyObservers();
- }
- return true;
- }
- catch(BadCredentialsException e){
- MessagingUtils.warningDialog("Could not authenticate", this, "Could not authenticate. Reason: Bad Credentials.");
- }
- catch(LockedException e){
- MessagingUtils.warningDialog("Could not authenticate", this, "Could not authenticate. Reason: Account is locked.");
- }
- catch(IllegalArgumentException e){
- MessagingUtils.warningDialog("Could not authenticate", this, "Could not authenticate. Reason: Username and/or Password empty.");
- }
- return false;
}
private void _logGrantedAuthotities(StringBuilder gaText, String indent,
* @return a {@link eu.etaxonomy.cdm.model.common.User} object.
*/
public User getAuthenticatedUser(){
- Authentication authentication = SecurityContextHolder.getContext().getAuthentication();
+ Authentication authentication = SecurityContextHolder.getContext().getAuthentication();
if(authentication != null
&& authentication.getPrincipal() != null
configurator.setClazz(DerivedUnit.class);
}
}
+ final List<String> OCCURRENCE_INIT_STRATEGY = Arrays.asList(new String[] {
+ "collection",
+ "descriptions",
+ "identifiers",
+ "derivationEvents.originals",
+ "derivedFrom.originals"
+ });
+ configurator.setPropertyPaths(OCCURRENCE_INIT_STRATEGY);
if(configurator.getClazz().equals(SpecimenOrObservationBase.class)){
//get FieldUnits + DerivedUnits
configurator.setClazz(DerivedUnit.class);
// $Id$
/**
-* Copyright (C) 2007 EDIT
-* European Distributed Institute of Taxonomy
-* http://www.e-taxonomy.eu
-*
-* The contents of this file are subject to the Mozilla Public License Version 1.1
-* See LICENSE.TXT at the top of this package for the full license terms.
-*/
+ * Copyright (C) 2007 EDIT
+ * European Distributed Institute of Taxonomy
+ * http://www.e-taxonomy.eu
+ *
+ * The contents of this file are subject to the Mozilla Public License Version 1.1
+ * See LICENSE.TXT at the top of this package for the full license terms.
+ */
package eu.etaxonomy.taxeditor.ui.bar;
import java.util.Observer;
import org.eclipse.swt.SWT;
-import org.eclipse.swt.layout.GridLayout;
import org.eclipse.swt.widgets.Composite;
import org.eclipse.swt.widgets.Control;
import org.eclipse.swt.widgets.Label;
+import org.eclipse.ui.PlatformUI;
import org.eclipse.ui.menus.WorkbenchWindowControlContribution;
import eu.etaxonomy.cdm.model.common.User;
+import eu.etaxonomy.taxeditor.remoting.source.CdmRemoteSource;
import eu.etaxonomy.taxeditor.store.CdmStore;
+import eu.etaxonomy.taxeditor.util.ApplicationUtil;
/**
* Shows the currently logged in user in status bar
*/
public class AuthenticatedUserBar extends WorkbenchWindowControlContribution implements Observer{
- private Label label_authenticatedUser;
-
- /**
- * <p>Constructor for AuthenticatedUserBar.</p>
- */
- public AuthenticatedUserBar(){
- CdmStore.getLoginManager().addObserver(this);
- }
-
- /* (non-Javadoc)
- * @see org.eclipse.jface.action.ControlContribution#createControl(org.eclipse.swt.widgets.Composite)
- */
- /** {@inheritDoc} */
- @Override
- protected Control createControl(Composite parent) {
- final Composite composite = new Composite(parent, SWT.NONE);
- final GridLayout layout = new GridLayout();
- composite.setLayout(layout);
-
- label_authenticatedUser = new Label(composite, SWT.NULL);
-
- update(null, null);
-
- return composite;
- }
-
- /* (non-Javadoc)
- * @see java.util.Observer#update(java.util.Observable, java.lang.Object)
- */
- /** {@inheritDoc} */
- public void update(Observable o, Object arg) {
- User authenticatedUser = CdmStore.getLoginManager().getAuthenticatedUser();
- // TODO find a method to recompute width for parental toolbar item
- String text = authenticatedUser == null ? "Not logged in " :
- "Logged in as: " + authenticatedUser.getUsername() + " ";
- label_authenticatedUser.setText(text);
- }
-
- /* (non-Javadoc)
- * @see org.eclipse.jface.action.ContributionItem#dispose()
- */
- /** {@inheritDoc} */
- @Override
- public void dispose() {
- super.dispose();
-
- CdmStore.getLoginManager().deleteObserver(this);
- }
-
+ private Label label_authenticatedUser;
+
+ /**
+ * <p>Constructor for AuthenticatedUserBar.</p>
+ */
+ public AuthenticatedUserBar(){
+ CdmStore.getLoginManager().addObserver(this);
+ }
+
+ /* (non-Javadoc)
+ * @see org.eclipse.jface.action.ControlContribution#createControl(org.eclipse.swt.widgets.Composite)
+ */
+ /** {@inheritDoc} */
+ @Override
+ protected Control createControl(Composite parent) {
+
+ label_authenticatedUser = new Label(parent, SWT.NULL);
+
+ update(null, null);
+
+ return label_authenticatedUser;
+ }
+
+ /* (non-Javadoc)
+ * @see java.util.Observer#update(java.util.Observable, java.lang.Object)
+ */
+ /** {@inheritDoc} */
+ @Override
+ public void update(Observable o, Object arg) {
+ User authenticatedUser = CdmStore.getLoginManager().getAuthenticatedUser();
+ // TODO find a method to recompute width for parental toolbar item
+ String text = "";
+ if(authenticatedUser == null) {
+ text = "Not logged in " ;
+ } else {
+ if(CdmStore.getCurrentSessionManager().isRemoting()) {
+ CdmRemoteSource source = (CdmRemoteSource) CdmStore.getActiveCdmSource();
+ String loginInfo = authenticatedUser.getUsername() + "@" + source.getName() + ":" + source.getContextPath();
+ PlatformUI.getWorkbench().getActiveWorkbenchWindow().getShell().setText(ApplicationUtil.getTitle() + " " + loginInfo);
+ }
+ text = "Logged in as: " + authenticatedUser.getUsername() + " ";
+ }
+
+ label_authenticatedUser.setText(text);
+ }
+
+ /* (non-Javadoc)
+ * @see org.eclipse.jface.action.ContributionItem#dispose()
+ */
+ /** {@inheritDoc} */
+ @Override
+ public void dispose() {
+ super.dispose();
+ CdmStore.getLoginManager().deleteObserver(this);
+ }
+
}
// $Id$
/**
* Copyright (C) 2007 EDIT
- * European Distributed Institute of Taxonomy
+ * European Distributed Institute of Taxonomy
* http://www.e-taxonomy.eu
- *
+ *
* The contents of this file are subject to the Mozilla Public License Version 1.1
* See LICENSE.TXT at the top of this package for the full license terms.
*/
import org.eclipse.swt.widgets.Shell;
import org.eclipse.swt.widgets.Text;
+import eu.etaxonomy.taxeditor.Messages;
+import eu.etaxonomy.taxeditor.model.AbstractUtility;
import eu.etaxonomy.taxeditor.store.CdmStore;
-import eu.etaxonomy.taxeditor.store.StoreUtil;
/**
* TODO wrap in a LoginModule
* @version 1.0
*/
public class LoginDialog extends Dialog {
-
+
private static Text text_password;
private static Text text_username;
- private String title;
+ private final String title;
- /**
- * <p>Constructor for LoginDialog.</p>
- *
- * @param parentShell a {@link org.eclipse.swt.widgets.Shell} object.
- */
public LoginDialog(Shell parentShell) {
super(parentShell);
- title = "Login";
+ title = Messages.LoginDialog_LOGIN;
}
-
- /* (non-Javadoc)
- * @see org.eclipse.jface.dialogs.Dialog#createDialogArea(org.eclipse.swt.widgets.Composite)
- */
+
/** {@inheritDoc} */
@Override
protected Control createDialogArea(Composite parent) {
Composite composite = (Composite) super.createDialogArea(parent);
//add controls to composite as necessary
-
+
// Label for the heading
final CLabel titleLabel = new CLabel(composite, SWT.NONE);
- titleLabel.setText("User Login");
+ titleLabel.setText(Messages.LoginDialog_USER_LOGIN);
// Label for the username
final CLabel userNameLabel = new CLabel(composite, SWT.NONE);
- userNameLabel.setText("Username");
+ userNameLabel.setText(Messages.LoginDialog_USER_NAME);
// Textfield for the username
text_username = new Text(composite, SWT.BORDER);
// Label for the password
final CLabel passwordLabel = new CLabel(composite, SWT.NONE);
- passwordLabel.setText("Password");
+ passwordLabel.setText(Messages.LoginDialog_PASSWORD);
// Textfield for the password
text_password = new Text(composite, SWT.PASSWORD | SWT.BORDER);
text_password.setLayoutData(new GridData(SWT.FILL, SWT.FILL, true, true));
-
-
+
+
return composite;
}
- /*
- * (non-Javadoc)
- *
- * @see org.eclipse.jface.window.Window#configureShell(org.eclipse.swt.widgets.Shell)
- */
/** {@inheritDoc} */
+ @Override
protected void configureShell(Shell shell) {
super.configureShell(shell);
if (title != null) {
}
}
- /* (non-Javadoc)
- * @see org.eclipse.jface.dialogs.Dialog#okPressed()
- */
/** {@inheritDoc} */
@Override
protected void okPressed() {
String username = text_username.getText();
String password = text_password.getText();
-
+
boolean result = CdmStore.getLoginManager().authenticate(username, password);
-
+
if(result){
super.okPressed();
}
-
- }
-
+
+ }
+
@Override
- protected void cancelPressed() {
+ protected void cancelPressed() {
if(CdmStore.getLoginManager().getAuthenticatedUser() != null){
super.cancelPressed();
}else{
// if there is no active user and the current user chooses to cancel, we close the connection
- boolean result = MessageDialog.openConfirm(getShell(), "Do you really want to cancel", "Aborting the login procedure will close the database.");
-
+ boolean result = MessageDialog.openConfirm(getShell(), Messages.LoginDialog_REALLY_CANCEL, Messages.LoginDialog_CANCEL_MESSAGE);
+
if(result){
- CdmStore.close(StoreUtil.getMonitor());
+ CdmStore.close(AbstractUtility.getMonitor());
super.cancelPressed();
}
}
--- /dev/null
+// $Id$
+/**
+ * Copyright (C) 2015 EDIT
+ * European Distributed Institute of Taxonomy
+ * http://www.e-taxonomy.eu
+ *
+ * The contents of this file are subject to the Mozilla Public License Version 1.1
+ * See LICENSE.TXT at the top of this package for the full license terms.
+ */
+package eu.etaxonomy.taxeditor.ui.dialog;
+
+import java.text.SimpleDateFormat;
+import java.util.Date;
+import java.util.HashMap;
+import java.util.List;
+import java.util.Map;
+
+import org.apache.commons.lang.StringUtils;
+import org.eclipse.core.runtime.IProgressMonitor;
+import org.eclipse.core.runtime.IStatus;
+import org.eclipse.core.runtime.Status;
+import org.eclipse.core.runtime.jobs.Job;
+import org.eclipse.core.runtime.preferences.ConfigurationScope;
+import org.eclipse.core.runtime.preferences.IEclipsePreferences;
+import org.eclipse.swt.SWT;
+import org.eclipse.swt.custom.StyledText;
+import org.eclipse.swt.events.MouseAdapter;
+import org.eclipse.swt.events.MouseEvent;
+import org.eclipse.swt.events.SelectionAdapter;
+import org.eclipse.swt.events.SelectionEvent;
+import org.eclipse.swt.graphics.Point;
+import org.eclipse.swt.layout.FillLayout;
+import org.eclipse.swt.layout.GridData;
+import org.eclipse.swt.layout.GridLayout;
+import org.eclipse.swt.widgets.Button;
+import org.eclipse.swt.widgets.Combo;
+import org.eclipse.swt.widgets.Composite;
+import org.eclipse.swt.widgets.Dialog;
+import org.eclipse.swt.widgets.Display;
+import org.eclipse.swt.widgets.Label;
+import org.eclipse.swt.widgets.Shell;
+import org.eclipse.swt.widgets.Text;
+import org.eclipse.ui.forms.events.ExpansionEvent;
+import org.eclipse.ui.forms.events.IExpansionListener;
+import org.eclipse.ui.forms.widgets.ExpandableComposite;
+import org.eclipse.wb.swt.SWTResourceManager;
+import org.osgi.service.prefs.BackingStoreException;
+import org.osgi.service.prefs.Preferences;
+
+import eu.etaxonomy.cdm.api.application.CdmApplicationState;
+import eu.etaxonomy.cdm.model.metadata.CdmMetaData;
+import eu.etaxonomy.taxeditor.model.MessagingUtils;
+import eu.etaxonomy.taxeditor.remoting.server.CDMServerException;
+import eu.etaxonomy.taxeditor.remoting.source.CdmRemoteSource;
+import eu.etaxonomy.taxeditor.remoting.source.CdmServerInfo;
+import eu.etaxonomy.taxeditor.remoting.source.CdmServerInfo.CdmInstanceInfo;
+import eu.etaxonomy.taxeditor.remoting.source.ICdmRemoteSource;
+import eu.etaxonomy.taxeditor.store.CdmStore;
+
+/**
+ * @author cmathew
+ * @date 20 Jan 2015
+ *
+ */
+public class RemotingLoginDialog extends Dialog {
+
+ protected Object result;
+ protected Shell shlConnect;
+ private Text txtCdmServerStatus;
+ private Text txtCdmInstanceStatus;
+ private Combo comboCdmServer;
+ private Combo comboCdmInstance;
+ private Button btnConnect;
+
+ private final Map<String, CdmServerInfo> csiiMap = new HashMap<String, CdmServerInfo>();
+
+ private final static String STATUS_AVAILABLE = "Available";
+ private final static String STATUS_NOT_AVAILABLE = "Not Available";
+ private final static String STATUS_RETRIEVING = "Retrieving ...";
+ private final static String STATUS_CHECKING_AVAILABILITY = "Checking ...";
+ private final static String STATUS_NO_INSTANCES = "No Instances Found";
+ private final static String STATUS_ERROR = "Error";
+ private final static String STATUS_REMOTING_NOT_ACTIVATED = "Remoting not activated";
+ private final static String STATUS_NOT_COMPATIBLE = "Not Compatible";
+
+ private final static String MESG_COMPATIBLE_EDITOR_OLD = "Please update the Taxonomic Editor (Help->Check for Updates) or choose a compatible cdm-server";
+ private final static String MESG_COMPATIBLE_SERVER_OLD = "Please choose a compatible cdm-server or update the chosen cdm-server";
+
+ private final static String STORE_PREFERENCES_NODE = "eu.etaxonomy.taxeditor.store";
+
+ private final static String LOGIN_NODE = "login";
+ private final static String USERNAME_SUFFIX = "_username";
+ private final static String PASSWORD_SUFFIX = "_password";
+
+ private final static String LAST_SERVER_INSTANCE_NODE = "lastServerInstance";
+ private final static String LAST_SERVER_KEY = "lastServerKey";
+ private final static String LAST_INSTANCE_KEY = "lastInstanceKey";
+
+
+ private Composite remotingComposite;
+ private CdmServerInfo selectedCsii;
+ private CdmInstanceInfo selectedCdmInstance;
+ private Button btnCdmServerRefresh;
+ private Composite loginComposite;
+ private Label lblLogin;
+ private Text txtLogin;
+ private Label lblPassword;
+ private Text txtPassword;
+ private Button btnRememberMe;
+ private Composite compAdvanced;
+ private Label lblPort;
+ private Text txtPort;
+ private Label lblServerVersion;
+ private Text txtServerVersion;
+ private ExpandableComposite xpndblcmpstAdvanced;
+ private StyledText styledTxtMessage;
+
+
+ private final int MIN_WIDTH = 530;
+ private final int MIN_HEIGHT = 220;
+ private final int MIN_EXP_HEIGHT = 380;
+ private final int MESSAGE_HEIGHT = 25;
+ private Label lblEditorVersion;
+ private Text txtEditorVersion;
+ private Label lblServerCDMVersion;
+ private Text txtServerCDMVersion;
+ private Label lblEditorCDMVersion;
+ private Text txtEditorCDMVersion;
+
+ private String serverName, instanceName;
+ private boolean autoConnect = false;
+ private boolean loadLoginPrefs = true;
+ private boolean isDevRemoteSource = false;
+
+ /**
+ * Create the dialog.
+ * @param parent
+ * @param style
+ */
+ public RemotingLoginDialog(Shell parent, int style) {
+ super(parent, style);
+ setText("Login");
+ }
+
+ public Object open(CdmRemoteSource source, boolean loadLoginPrefs, boolean autoConnect) {
+ this.loadLoginPrefs = loadLoginPrefs;
+ this.serverName = source.getName();
+ String contextPath = source.getContextPath();
+ this.instanceName = contextPath.substring(contextPath.lastIndexOf("/") + 1);
+ return open(serverName, instanceName, loadLoginPrefs, autoConnect);
+ }
+
+
+ public Object open(String serverName, String instanceName, boolean loadLoginPrefs, boolean autoConnect) {
+ this.serverName = serverName;
+ this.instanceName = instanceName;
+ this.loadLoginPrefs = loadLoginPrefs;
+ this.autoConnect = autoConnect;
+ return open();
+ }
+
+ /**
+ * Open the dialog.
+ * @return the result
+ */
+ public Object open() {
+ // ICdmRemoteSource devRemoteSource = CdmServerInfo.getDevServerRemoteSource();
+ // if(devRemoteSource != null) {
+ // connect(devRemoteSource);
+ // } else {
+ createContents();
+ if(serverName == null && instanceName == null) {
+ readPrefLastServerInstance();
+ }
+
+ setEditorInfo();
+ populateCdmServerCombo();
+ shlConnect.open();
+ shlConnect.layout();
+
+ xpndblcmpstAdvanced.setExpanded(false);
+
+ Display display = getParent().getDisplay();
+
+ while (!shlConnect.isDisposed()) {
+ if (!display.readAndDispatch()) {
+ display.sleep();
+ }
+ }
+ //}
+ return result;
+ }
+
+ /**
+ * Create contents of the dialog.
+ */
+ private void createContents() {
+ shlConnect = new Shell(getParent(), SWT.DIALOG_TRIM);
+ shlConnect.setMinimumSize(new Point(MIN_WIDTH, MIN_HEIGHT));
+ shlConnect.setSize(MIN_WIDTH, MIN_HEIGHT);
+ shlConnect.setText("Connect");
+ shlConnect.setLayout(new FillLayout(SWT.HORIZONTAL));
+
+ remotingComposite = new Composite(shlConnect, SWT.NONE);
+ remotingComposite.setLayout(new GridLayout(1, false));
+
+ Composite cdmServerComposite = new Composite(remotingComposite, SWT.NONE);
+ GridData gd_cdmServerComposite = new GridData(SWT.LEFT, SWT.CENTER, false, false, 1, 1);
+ gd_cdmServerComposite.heightHint = 68;
+ cdmServerComposite.setLayoutData(gd_cdmServerComposite);
+ cdmServerComposite.setLayout(new GridLayout(4, false));
+
+ Label lblCdmServer = new Label(cdmServerComposite, SWT.NONE);
+ lblCdmServer.setText("CDM Server : ");
+ lblCdmServer.setFont(SWTResourceManager.getFont("Ubuntu", 9, SWT.NORMAL));
+ lblCdmServer.setLayoutData(new GridData(SWT.RIGHT, SWT.CENTER, false, false, 1, 1));
+
+ comboCdmServer = new Combo(cdmServerComposite, SWT.READ_ONLY);
+ comboCdmServer.addSelectionListener(new SelectionAdapter() {
+ @Override
+ public void widgetSelected(SelectionEvent e) {
+ refreshCdmServer();
+ updatePort();
+ }
+ });
+ GridData gd_comboCdmServer = new GridData(SWT.FILL, SWT.FILL, true, false, 1, 1);
+ gd_comboCdmServer.widthHint = 150;
+ comboCdmServer.setLayoutData(gd_comboCdmServer);
+ comboCdmServer.select(0);
+
+ txtCdmServerStatus = new Text(cdmServerComposite, SWT.BORDER);
+ txtCdmServerStatus.setBackground(SWTResourceManager.getColor(SWT.COLOR_INFO_BACKGROUND));
+ txtCdmServerStatus.setEditable(false);
+ GridData gd_txtCdmServerStatus = new GridData(SWT.FILL, SWT.CENTER, true, false, 1, 1);
+ gd_txtCdmServerStatus.widthHint = 100;
+ txtCdmServerStatus.setLayoutData(gd_txtCdmServerStatus);
+
+ btnCdmServerRefresh = new Button(cdmServerComposite, SWT.NONE);
+ btnCdmServerRefresh.addSelectionListener(new SelectionAdapter() {
+ @Override
+ public void widgetSelected(SelectionEvent e) {
+ refreshCdmServer();
+ }
+ });
+ btnCdmServerRefresh.setLayoutData(new GridData(SWT.FILL, SWT.CENTER, false, false, 1, 1));
+ btnCdmServerRefresh.setText("Refresh");
+
+ Label lblCdmInstance = new Label(cdmServerComposite, SWT.NONE);
+ GridData gd_lblCdmInstance = new GridData(SWT.RIGHT, SWT.CENTER, false, false, 1, 1);
+ gd_lblCdmInstance.heightHint = 30;
+ lblCdmInstance.setLayoutData(gd_lblCdmInstance);
+ lblCdmInstance.setText("CDM Instance : ");
+ lblCdmInstance.setFont(SWTResourceManager.getFont("Ubuntu", 9, SWT.NORMAL));
+
+ comboCdmInstance = new Combo(cdmServerComposite, SWT.READ_ONLY);
+ comboCdmInstance.addSelectionListener(new SelectionAdapter() {
+ @Override
+ public void widgetSelected(SelectionEvent e) {
+ updateSelectedCdmInstance();
+ checkSelectedCdmInstance();
+ }
+ });
+ GridData gd_comboCdmInstance = new GridData(SWT.FILL, SWT.FILL, true, false, 1, 1);
+ gd_comboCdmInstance.widthHint = 150;
+ comboCdmInstance.setLayoutData(gd_comboCdmInstance);
+ comboCdmInstance.select(0);
+
+ txtCdmInstanceStatus = new Text(cdmServerComposite, SWT.BORDER);
+ txtCdmInstanceStatus.setBackground(SWTResourceManager.getColor(SWT.COLOR_INFO_BACKGROUND));
+ txtCdmInstanceStatus.setEditable(false);
+ GridData gd_txtCdmInstanceStatus = new GridData(SWT.FILL, SWT.CENTER, true, false, 1, 1);
+ gd_txtCdmInstanceStatus.widthHint = 100;
+ txtCdmInstanceStatus.setLayoutData(gd_txtCdmInstanceStatus);
+
+ Button btnCdmInstanceRefresh = new Button(cdmServerComposite, SWT.FLAT);
+ btnCdmInstanceRefresh.addSelectionListener(new SelectionAdapter() {
+ @Override
+ public void widgetSelected(SelectionEvent e) {
+ refreshCdmInstance();
+ }
+ });
+ GridData gd_btnCdmInstanceRefresh = new GridData(SWT.FILL, SWT.CENTER, true, false, 1, 1);
+ gd_btnCdmInstanceRefresh.widthHint = 110;
+ gd_btnCdmInstanceRefresh.heightHint = 30;
+ btnCdmInstanceRefresh.setLayoutData(gd_btnCdmInstanceRefresh);
+ btnCdmInstanceRefresh.setText("Refresh");
+
+ loginComposite = new Composite(remotingComposite, SWT.NONE);
+ GridData gd_loginComposite = new GridData(SWT.LEFT, SWT.CENTER, false, false, 1, 1);
+ gd_loginComposite.widthHint = 487;
+ gd_loginComposite.heightHint = 70;
+ loginComposite.setLayoutData(gd_loginComposite);
+ GridLayout gl_loginComposite = new GridLayout(6, false);
+ gl_loginComposite.marginTop = 5;
+ loginComposite.setLayout(gl_loginComposite);
+
+ lblLogin = new Label(loginComposite, SWT.CENTER);
+ GridData gd_lblLogin = new GridData(SWT.RIGHT, SWT.CENTER, false, false, 1, 1);
+ gd_lblLogin.widthHint = 50;
+ lblLogin.setLayoutData(gd_lblLogin);
+ lblLogin.setText("Login : ");
+ lblLogin.setFont(SWTResourceManager.getFont("Ubuntu", 9, SWT.NORMAL));
+
+ txtLogin = new Text(loginComposite, SWT.BORDER);
+ GridData gd_txtLogin = new GridData(SWT.FILL, SWT.FILL, true, false, 1, 1);
+ gd_txtLogin.minimumWidth = 80;
+ gd_txtLogin.widthHint = 80;
+ gd_txtLogin.heightHint = 15;
+ txtLogin.setLayoutData(gd_txtLogin);
+
+ lblPassword = new Label(loginComposite, SWT.CENTER);
+ lblPassword.setLayoutData(new GridData(SWT.RIGHT, SWT.CENTER, false, false, 1, 1));
+ lblPassword.setText("Password : ");
+ lblPassword.setFont(SWTResourceManager.getFont("Ubuntu", 9, SWT.NORMAL));
+
+ txtPassword = new Text(loginComposite, SWT.BORDER | SWT.PASSWORD);
+ GridData gd_txtPassword = new GridData(SWT.FILL, SWT.FILL, true, false, 1, 1);
+ gd_txtPassword.minimumWidth = 80;
+ gd_txtPassword.widthHint = 80;
+ gd_txtPassword.heightHint = 15;
+ txtPassword.setLayoutData(gd_txtPassword);
+ new Label(loginComposite, SWT.NONE);
+
+ btnConnect = new Button(loginComposite, SWT.FLAT);
+ btnConnect.setLayoutData(new GridData(SWT.FILL, SWT.FILL, true, false, 1, 1));
+ btnConnect.addMouseListener(new MouseAdapter() {
+ @Override
+ public void mouseUp(MouseEvent e) {
+ connect();
+ }
+ });
+ btnConnect.setText("Connect");
+
+ btnRememberMe = new Button(loginComposite, SWT.CHECK);
+ btnRememberMe.setSelection(true);
+ GridData gd_btnRememberMe = new GridData(SWT.LEFT, SWT.CENTER, false, false, 2, 1);
+ gd_btnRememberMe.widthHint = 107;
+ btnRememberMe.setLayoutData(gd_btnRememberMe);
+ btnRememberMe.setText("Remember Me");
+ new Label(loginComposite, SWT.NONE);
+ new Label(loginComposite, SWT.NONE);
+ new Label(loginComposite, SWT.NONE);
+ new Label(loginComposite, SWT.NONE);
+
+ styledTxtMessage = new StyledText(remotingComposite, SWT.NONE);
+ styledTxtMessage.setBackground(SWTResourceManager.getColor(SWT.COLOR_INFO_BACKGROUND));
+ styledTxtMessage.setForeground(SWTResourceManager.getColor(SWT.COLOR_DARK_RED));
+ styledTxtMessage.setFont(SWTResourceManager.getFont("Ubuntu", 12, SWT.BOLD));
+ styledTxtMessage.setSelectionBackground(SWTResourceManager.getColor(SWT.COLOR_LIST_SELECTION_TEXT));
+ styledTxtMessage.setSelectionForeground(SWTResourceManager.getColor(SWT.COLOR_DARK_RED));
+ styledTxtMessage.setDoubleClickEnabled(false);
+ styledTxtMessage.setEditable(false);
+ GridData gd_styledTxtMessage = new GridData(SWT.FILL, SWT.FILL, true, false, 1, 1);
+ gd_styledTxtMessage.exclude = true;
+ gd_styledTxtMessage.minimumHeight = MESSAGE_HEIGHT;
+ gd_styledTxtMessage.heightHint = MESSAGE_HEIGHT;
+ styledTxtMessage.setLayoutData(gd_styledTxtMessage);
+
+ xpndblcmpstAdvanced = new ExpandableComposite(remotingComposite, SWT.NONE, ExpandableComposite.TWISTIE);
+ GridData gd_xpndblcmpstAdvanced = new GridData(SWT.FILL, SWT.FILL, false, true, 1, 1);
+ gd_xpndblcmpstAdvanced.heightHint = 19;
+ xpndblcmpstAdvanced.setLayoutData(gd_xpndblcmpstAdvanced);
+ xpndblcmpstAdvanced.addExpansionListener(new IExpansionListener() {
+ @Override
+ public void expansionStateChanged(ExpansionEvent e) {
+ GridData gridData = (GridData) xpndblcmpstAdvanced.getLayoutData();
+ if(e.getState()) {
+ shlConnect.setSize(MIN_WIDTH, MIN_EXP_HEIGHT);
+ } else {
+ shlConnect.setSize(MIN_WIDTH, MIN_HEIGHT);
+ }
+
+ }
+ @Override
+ public void expansionStateChanging(ExpansionEvent e) {
+ }
+ });
+ xpndblcmpstAdvanced.setText("advanced");
+ xpndblcmpstAdvanced.setExpanded(true);
+
+ compAdvanced = new Composite(xpndblcmpstAdvanced, SWT.NONE);
+ xpndblcmpstAdvanced.setClient(compAdvanced);
+ compAdvanced.setLayout(new GridLayout(4, false));
+
+ lblPort = new Label(compAdvanced, SWT.CENTER);
+ lblPort.setLayoutData(new GridData(SWT.RIGHT, SWT.CENTER, false, false, 1, 1));
+ lblPort.setSize(0, 0);
+ lblPort.setText("Port : ");
+ lblPort.setFont(SWTResourceManager.getFont("Ubuntu", 9, SWT.NORMAL));
+
+ txtPort = new Text(compAdvanced, SWT.BORDER);
+ GridData gd_txtPort = new GridData(SWT.FILL, SWT.CENTER, false, false, 1, 1);
+ gd_txtPort.minimumWidth = 50;
+ gd_txtPort.widthHint = 50;
+ txtPort.setLayoutData(gd_txtPort);
+
+ lblServerVersion = new Label(compAdvanced, SWT.CENTER);
+ lblServerVersion.setLayoutData(new GridData(SWT.RIGHT, SWT.CENTER, false, false, 1, 1));
+ lblServerVersion.setText("Server Cdmlib Version :");
+ lblServerVersion.setFont(SWTResourceManager.getFont("Ubuntu", 9, SWT.NORMAL));
+
+ txtServerVersion = new Text(compAdvanced, SWT.BORDER);
+ txtServerVersion.setEditable(false);
+ txtServerVersion.setLayoutData(new GridData(SWT.FILL, SWT.CENTER, false, false, 1, 1));
+ new Label(compAdvanced, SWT.NONE);
+ new Label(compAdvanced, SWT.NONE);
+
+ lblEditorVersion = new Label(compAdvanced, SWT.CENTER);
+ lblEditorVersion.setLayoutData(new GridData(SWT.RIGHT, SWT.CENTER, false, false, 1, 1));
+ lblEditorVersion.setText("Editor Cdmlib Version :");
+ lblEditorVersion.setFont(SWTResourceManager.getFont("Ubuntu", 9, SWT.NORMAL));
+
+ txtEditorVersion = new Text(compAdvanced, SWT.BORDER);
+ txtEditorVersion.setEditable(false);
+ txtEditorVersion.setLayoutData(new GridData(SWT.FILL, SWT.CENTER, true, false, 1, 1));
+ new Label(compAdvanced, SWT.NONE);
+ new Label(compAdvanced, SWT.NONE);
+
+ lblServerCDMVersion = new Label(compAdvanced, SWT.CENTER);
+ lblServerCDMVersion.setLayoutData(new GridData(SWT.RIGHT, SWT.CENTER, false, false, 1, 1));
+ lblServerCDMVersion.setText("Server CDM Version :");
+ lblServerCDMVersion.setFont(SWTResourceManager.getFont("Ubuntu", 9, SWT.NORMAL));
+
+ txtServerCDMVersion = new Text(compAdvanced, SWT.BORDER);
+ txtServerCDMVersion.setEditable(false);
+ txtServerCDMVersion.setLayoutData(new GridData(SWT.FILL, SWT.CENTER, true, false, 1, 1));
+ new Label(compAdvanced, SWT.NONE);
+ new Label(compAdvanced, SWT.NONE);
+
+ lblEditorCDMVersion = new Label(compAdvanced, SWT.CENTER);
+ lblEditorCDMVersion.setLayoutData(new GridData(SWT.RIGHT, SWT.CENTER, false, false, 1, 1));
+ lblEditorCDMVersion.setText("Editor CDM Version :");
+ lblEditorCDMVersion.setFont(SWTResourceManager.getFont("Ubuntu", 9, SWT.NORMAL));
+
+ txtEditorCDMVersion = new Text(compAdvanced, SWT.BORDER);
+ txtEditorCDMVersion.setEditable(false);
+ txtEditorCDMVersion.setLayoutData(new GridData(SWT.FILL, SWT.CENTER, true, false, 1, 1));
+
+ }
+
+
+
+ private void populateCdmServerCombo() {
+ Job job = new Job("Retrieve Server Instances") {
+ @Override
+ protected IStatus run(IProgressMonitor monitor) {
+ Display.getDefault().syncExec(new Runnable() {
+ @Override
+ public void run() {
+ for(CdmServerInfo csii : CdmServerInfo.getCdmServers()) {
+ csiiMap.put(csii.getName(), csii);
+ comboCdmServer.add(csii.getName());
+ }
+ int serverIndex = -1;
+ if(serverName != null) {
+ serverIndex = comboCdmServer.indexOf(serverName);
+ }
+ if(serverIndex == -1) {
+ comboCdmServer.select(0);
+ autoConnect = false;
+ } else {
+ comboCdmServer.select(serverIndex);
+ }
+ CdmRemoteSource devRemoteSource = CdmServerInfo.getDevServerRemoteSource();
+ if(devRemoteSource != null) {
+ isDevRemoteSource = true;
+ }
+ refreshCdmServer();
+ updatePort();
+
+ if(devRemoteSource != null) {
+ String username = System.getProperty("cdm.server.dev.username");
+ String password = System.getProperty("cdm.server.dev.password");
+ if(username != null && !username.isEmpty() && password != null && !password.isEmpty()) {
+ txtLogin.setText(username);
+ txtPassword.setText(password);
+ CdmStore.connect(devRemoteSource, RemotingLoginDialog.this);
+ }
+ }
+ }
+ });
+ return Status.OK_STATUS;
+ }
+ };
+ job.schedule();
+ }
+
+
+ private void refreshCdmServer() {
+ txtCdmServerStatus.setText(STATUS_CHECKING_AVAILABILITY);
+ updateSelectedCdmServer();
+ checkSelectedCdmServer();
+ }
+
+ private void updateSelectedCdmServer() {
+ int selIndex = comboCdmServer.getSelectionIndex();
+ if(selIndex != -1) {
+ selectedCsii = csiiMap.get(comboCdmServer.getItem(selIndex));
+ }
+ }
+
+ private void updatePort() {
+ txtPort.setText("");
+ if(selectedCsii != null) {
+ txtPort.setText(String.valueOf(selectedCsii.getPort()));
+ }
+ }
+
+ private int getPort() {
+ int port = 0;
+ try {
+ port = Integer.valueOf(txtPort.getText());
+ } catch (NumberFormatException nfe) {
+ setMessage("Port should be an integer");
+ }
+ return port;
+ }
+
+ private void checkSelectedCdmServer() {
+
+ clearOnServerChange();
+ emptyCredentials();
+
+ if(selectedCsii != null) {
+ if(selectedCsii.isLocalhost()) {
+ txtPort.setEditable(true);
+ txtPort.setEnabled(true);
+ }
+ if(selectedCsii.pingServer()) {
+ txtCdmServerStatus.setText(STATUS_AVAILABLE);
+ populateCdmInstanceCombo(true);
+ txtServerVersion.setText(selectedCsii.getCdmlibServicesVersion());
+ txtServerVersion.setToolTipText(generateLastModifiedTooltip(selectedCsii.getCdmlibLastModified()));
+
+ } else {
+ txtCdmServerStatus.setText(STATUS_NOT_AVAILABLE);
+ comboCdmInstance.removeAll();
+ }
+ }
+ }
+
+
+ private void populateCdmInstanceCombo(final boolean forceRefresh) {
+ comboCdmInstance.removeAll();
+ comboCdmInstance.setEnabled(false);
+ btnConnect.setEnabled(false);
+ txtCdmInstanceStatus.setText(STATUS_RETRIEVING);
+ txtCdmInstanceStatus.setToolTipText("");
+
+ Job job = new Job("Retrieve Server Instances") {
+ @Override
+ protected IStatus run(IProgressMonitor monitor) {
+ try {
+ if(selectedCsii != null) {
+ if(forceRefresh) {
+ selectedCsii.refreshInstances();
+ }
+ final List<CdmInstanceInfo> instances = selectedCsii.getInstances();
+ Display.getDefault().asyncExec(new Runnable() {
+ @Override
+ public void run() {
+ if(!instances.isEmpty()) {
+ for(CdmInstanceInfo cdmInstance : instances) {
+ comboCdmInstance.add(cdmInstance.getName());
+ }
+ int instanceIndex = -1;
+ if(instanceName != null) {
+ instanceIndex = comboCdmInstance.indexOf(instanceName);
+ }
+ if(instanceIndex == -1) {
+ comboCdmInstance.select(0);
+ autoConnect = false;
+ } else {
+ comboCdmInstance.select(instanceIndex);
+ }
+ updateSelectedCdmInstance();
+ checkSelectedCdmInstance();
+ comboCdmInstance.setEnabled(true);
+ if(autoConnect) {
+ connect();
+ }
+
+ } else {
+ txtCdmInstanceStatus.setText(STATUS_NO_INSTANCES);
+ btnConnect.setEnabled(false);
+ }
+ }
+ });
+ }
+ } catch (final CDMServerException e) {
+ MessagingUtils.warn(getClass(), e);
+ Display.getDefault().asyncExec(new Runnable() {
+ @Override
+ public void run() {
+ txtCdmInstanceStatus.setText(STATUS_NOT_AVAILABLE);
+ txtCdmInstanceStatus.setToolTipText(e.getMessage());
+ comboCdmInstance.setEnabled(false);
+ btnConnect.setEnabled(false);
+ }
+ });
+ }
+ return Status.OK_STATUS;
+ }
+ };
+
+ if(txtCdmServerStatus.getText().equals(STATUS_AVAILABLE) && !isDevRemoteSource) {
+ // Start the Job
+ job.schedule();
+ }
+
+ }
+
+ private void refreshCdmInstance() {
+ txtCdmInstanceStatus.setText(STATUS_CHECKING_AVAILABILITY);
+ clearOnInstanceChange();
+ updateSelectedCdmInstance();
+ checkSelectedCdmInstance();
+ }
+
+ private void updateSelectedCdmInstance() {
+ int selIndex = comboCdmInstance.getSelectionIndex();
+ if(selIndex != -1) {
+ selectedCdmInstance = selectedCsii.getInstanceFromName(comboCdmInstance.getItem(selIndex));
+ if(loadLoginPrefs && !isDevRemoteSource) {
+ readPrefCredentials();
+ }
+ }
+ }
+
+ private void checkSelectedCdmInstance() {
+ boolean available = false;
+ String status = STATUS_NOT_AVAILABLE;
+ String message = null;
+
+ if(txtCdmServerStatus.getText().equals(STATUS_AVAILABLE)) {
+ try {
+ if(selectedCsii.pingInstance(selectedCdmInstance, getPort())) {
+ status = STATUS_AVAILABLE;
+ available = true;
+ } else {
+ status = STATUS_NOT_AVAILABLE;
+ available = false;
+ }
+
+ if(available) {
+ txtServerCDMVersion.setText(selectedCsii.getCdmRemoteSource(selectedCdmInstance, getPort()).getDbSchemaVersion());
+ int compareDbSchemaVersion = selectedCsii.compareDbSchemaVersion(selectedCdmInstance, getPort());
+ int compareCdmlibServicesVersion = selectedCsii.compareCdmlibServicesVersion();
+
+ if(compareDbSchemaVersion > 0 || compareCdmlibServicesVersion > 0) {
+ status = STATUS_NOT_COMPATIBLE;
+ available = false;
+ message = MESG_COMPATIBLE_EDITOR_OLD;
+ } else if(compareDbSchemaVersion < 0 || compareCdmlibServicesVersion < 0) {
+ status = STATUS_NOT_COMPATIBLE;
+ available = false;
+ message = MESG_COMPATIBLE_SERVER_OLD;
+ } else {
+ status = STATUS_AVAILABLE;
+ available = true;
+ message = "";
+ }
+
+
+ }
+
+ } catch (Exception e) {
+ txtCdmInstanceStatus.setToolTipText(e.getMessage());
+ } finally {
+ btnConnect.setEnabled(available);
+ txtCdmInstanceStatus.setText(status);
+ if(!StringUtils.isBlank(message)) {
+ setMessage(message);
+ }
+ }
+
+ }
+
+ }
+
+ private void connect() {
+ checkSelectedCdmInstance();
+
+ if(!txtCdmInstanceStatus.getText().equals(STATUS_AVAILABLE)) {
+ return;
+ }
+
+ ICdmRemoteSource source = selectedCsii.getCdmRemoteSource(selectedCdmInstance, getPort());
+
+ if(!validateLogin()) {
+ return;
+ }
+
+ try {
+ CdmStore.connect(source, this);
+ } catch (Exception e) {
+ // Do not expect anything to go wrong at this point, so we throw a runtime exception
+ // if any problems
+ throw new RuntimeException(e);
+ }
+
+ }
+
+
+ public boolean isRememberMe() {
+ return btnRememberMe.getSelection();
+ }
+
+ private void persistPrefLastServerInstance() {
+ IEclipsePreferences preferences = ConfigurationScope.INSTANCE.getNode(STORE_PREFERENCES_NODE);
+ Preferences lastServerInstancePrefs = preferences.node(LAST_SERVER_INSTANCE_NODE);
+
+ lastServerInstancePrefs.put(LAST_SERVER_KEY, selectedCsii.getName());
+ lastServerInstancePrefs.put(LAST_INSTANCE_KEY, selectedCdmInstance.getName());
+
+ flushPreferences(lastServerInstancePrefs);
+ }
+
+ private void persistPrefCredentials() {
+ IEclipsePreferences preferences = ConfigurationScope.INSTANCE.getNode(STORE_PREFERENCES_NODE);
+ Preferences credentialsPrefs = preferences.node(LOGIN_NODE);
+ credentialsPrefs.put(getUsernamePrefKey(), txtLogin.getText());
+ credentialsPrefs.put(getPasswordPrefKey(), txtPassword.getText());
+ flushPreferences(credentialsPrefs);
+ }
+
+ private void flushPreferences(Preferences prefs) {
+ try {
+ prefs.flush();
+ } catch (BackingStoreException bse) {
+ setMessage(bse.getMessage());
+ }
+ }
+
+ private void readPrefCredentials() {
+ String username, password;
+ IEclipsePreferences preferences = ConfigurationScope.INSTANCE.getNode(STORE_PREFERENCES_NODE);
+ Preferences credentialsPrefs = preferences.node(LOGIN_NODE);
+ username = credentialsPrefs.get(getUsernamePrefKey(), "");
+ txtLogin.setText(username);
+ password = credentialsPrefs.get(getPasswordPrefKey(),"");
+ txtPassword.setText(password);
+ if(username.isEmpty() || password.isEmpty()) {
+ autoConnect = false;
+ }
+ }
+
+ private void readPrefLastServerInstance() {
+ IEclipsePreferences preferences = ConfigurationScope.INSTANCE.getNode(STORE_PREFERENCES_NODE);
+ Preferences lastServerInstancePrefs = preferences.node(LAST_SERVER_INSTANCE_NODE);
+
+ serverName = lastServerInstancePrefs.get(LAST_SERVER_KEY, null);
+ instanceName = lastServerInstancePrefs.get(LAST_INSTANCE_KEY, null);
+ }
+
+ private void emptyCredentials() {
+ txtLogin.setText("");
+ txtPassword.setText("");
+ }
+
+ private String getUsernamePrefKey() {
+ return selectedCsii.toString(selectedCdmInstance.getName(), getPort()) + USERNAME_SUFFIX;
+ }
+
+ private String getPasswordPrefKey() {
+ return selectedCsii.toString(selectedCdmInstance.getName(), getPort()) + PASSWORD_SUFFIX;
+ }
+
+ private boolean validateLogin() {
+ if(getUsername() == null || getUsername().isEmpty()) {
+ setMessage("User login cannot be empty");
+ return false;
+ }
+ if(getPassword() == null || getPassword().isEmpty()) {
+ setMessage("Password cannot be empty");
+ return false;
+ }
+ return true;
+ }
+ public String getUsername() {
+ return txtLogin.getText();
+ }
+
+ public String getPassword() {
+ return txtPassword.getText();
+ }
+
+ public void setMessage(String message) {
+ if(message != null && !message.isEmpty()) {
+ if(message.length() > 60) {
+ styledTxtMessage.setToolTipText(message);
+ message = message.substring(0, 60) + "...";
+ }
+ styledTxtMessage.setText(message);
+ styledTxtMessage.setVisible(true);
+ ((GridData)styledTxtMessage.getLayoutData()).exclude = false;
+ shlConnect.setSize(MIN_WIDTH, getHeightWithoutMessage() + MESSAGE_HEIGHT);
+ shlConnect.setMinimumSize(MIN_WIDTH, getHeightWithoutMessage() + MESSAGE_HEIGHT);
+ } else {
+ styledTxtMessage.setText("");
+ styledTxtMessage.setVisible(false);
+ ((GridData)styledTxtMessage.getLayoutData()).exclude = true;
+ shlConnect.setSize(MIN_WIDTH, getHeightWithoutMessage());
+ shlConnect.setMinimumSize(MIN_WIDTH, getHeightWithoutMessage());
+ }
+ remotingComposite.layout();
+ }
+
+ private int getHeightWithoutMessage() {
+ if(xpndblcmpstAdvanced.isExpanded()) {
+ return MIN_EXP_HEIGHT;
+ } else {
+ return MIN_HEIGHT;
+ }
+ }
+
+
+ public void hide(boolean isHidden) {
+ if(shlConnect != null && shlConnect.getDisplay() != null) {
+ shlConnect.setVisible(!isHidden);
+ }
+ }
+ public void dispose() {
+ if(shlConnect != null && shlConnect.getDisplay() != null) {
+ shlConnect.dispose();
+ }
+ }
+
+ public void onComplete() {
+ Display.getDefault().asyncExec(new Runnable() {
+ @Override
+ public void run() {
+ if(!isDevRemoteSource) {
+ if(isRememberMe()) {
+ persistPrefCredentials();
+ }
+ persistPrefLastServerInstance();
+ }
+ dispose();
+ }
+ });
+ }
+
+ private String generateLastModifiedTooltip(String cdmlibLastModified) {
+ SimpleDateFormat sdf = new SimpleDateFormat("yyyy.MM.dd 'at' HH:mm:ss z");
+ Date cdmlibLastModifiedDate;
+ String cdmlibLastModifiedTimestamp = "";
+
+ cdmlibLastModifiedDate = new Date(Long.valueOf(cdmlibLastModified));
+ cdmlibLastModifiedTimestamp = sdf.format(cdmlibLastModifiedDate);
+
+ return "last modified : " + cdmlibLastModifiedTimestamp;
+ }
+
+ private void setEditorInfo() {
+ txtEditorCDMVersion.setText(CdmMetaData.getDbSchemaVersion());
+ txtEditorVersion.setText(CdmApplicationState.getCdmlibVersion());
+ txtEditorVersion.setToolTipText(generateLastModifiedTooltip(CdmApplicationState.getCdmlibLastModified()));
+ }
+
+ private void clearOnServerChange() {
+ setMessage("");
+ txtServerCDMVersion.setText("");
+ txtServerVersion.setText("");
+ txtServerVersion.setToolTipText("");
+ txtServerCDMVersion.setText("");
+ txtPort.setEditable(false);
+ txtPort.setEnabled(false);
+ }
+
+ private void clearOnInstanceChange() {
+ setMessage("");
+ txtServerCDMVersion.setText("");
+ }
+
+ private void updateOnServerChange(String serverVersion, String serverVersionTooltip) {
+
+ }
+
+}
import org.eclipse.swt.events.SelectionAdapter;
import org.eclipse.swt.events.SelectionEvent;
import org.eclipse.swt.events.SelectionListener;
+import org.eclipse.swt.graphics.Cursor;
import org.eclipse.swt.widgets.Composite;
import org.eclipse.swt.widgets.Control;
import org.eclipse.swt.widgets.Link;
protected T cdmBaseToBeFiltered;
+
/**
* <p>Constructor for AbstractFilteredCdmResourceSelectionDialog.</p>
*
this.conversation = conversation;
+ Cursor cursor = shell.getCursor();
+ shell.setCursor(shell.getDisplay().getSystemCursor(SWT.CURSOR_WAIT));
init();
-
initModel();
-
+ shell.setCursor(cursor);
String objectTitle = getTitle(cdmObject);
if (objectTitle != null) {
setInitialPattern(objectTitle);
/** {@inheritDoc} */
@Override
public void refresh() {
- initModel();
+ //initModel();
filterExcludedObjects();
super.refresh();
}
if (status == IStatus.OK) {
T entity = (T) wizard.getEntity();
+ model.add(new UuidAndTitleCache<T>(entity.getUuid(),
+ entity.getId(),
+ getTitle(entity)));
refresh();
setPattern(entity);
getConversationHolder().bind();
import eu.etaxonomy.taxeditor.store.CdmStore;
/**
- * <p>FilteredNamedAreaSelectionDialog class.</p>
- *
* @author n.hoffmann
* @created May 11, 2010
* @version 1.0
}else{
selectedVocabularies.remove(vocabulary);
}
-
initModel();
}
}
private Collection<TermVocabulary<NamedArea>> selectedVocabularies;
+ private ArrayList<TermVocabulary> preselectedVocabularies;
/**
* @param namedArea
* A namedArea that should be selected when the dialog opens
* @param conversation a {@link eu.etaxonomy.cdm.api.conversation.ConversationHolder} object.
+ * @param preselectedVocabularyUuids the {@link UUID}s of the pre-selected vocabularies
* @return a {@link eu.etaxonomy.cdm.model.location.NamedArea} object.
*/
- public static NamedArea select(Shell shell, ConversationHolder conversation, NamedArea namedArea) {
+ public static NamedArea select(Shell shell, ConversationHolder conversation, NamedArea namedArea, UUID... preselectedVocabularyUuids) {
NamedAreaSelectionDialog dialog = new NamedAreaSelectionDialog(shell, conversation,
- "Choose an area", false, namedArea);
+ "Choose an area", false, namedArea, preselectedVocabularyUuids);
return getSelectionFromDialog(dialog);
}
- /**
- * <p>Constructor for FilteredNamedAreaSelectionDialog.</p>
- *
- * @param shell a {@link org.eclipse.swt.widgets.Shell} object.
- * @param conversation a {@link eu.etaxonomy.cdm.api.conversation.ConversationHolder} object.
- * @param title a {@link java.lang.String} object.
- * @param multi a boolean.
- * @param namedArea a {@link eu.etaxonomy.cdm.model.location.NamedArea} object.
- */
- protected NamedAreaSelectionDialog(Shell shell, ConversationHolder conversation, String title, boolean multi, NamedArea namedArea) {
+ protected NamedAreaSelectionDialog(Shell shell, ConversationHolder conversation, String title, boolean multi, NamedArea namedArea, UUID... preselectedVocabularyUuids) {
super(shell, conversation, title, multi, NamedAreaSelectionDialog.class.getCanonicalName(), namedArea);
+ if(preselectedVocabularyUuids.length>0){
+ preselectedVocabularies = new ArrayList<TermVocabulary>();
+ for(int i=0;i<preselectedVocabularyUuids.length;i++){
+ TermVocabulary preselectedVocabulary = CdmStore.getService(IVocabularyService.class).find(preselectedVocabularyUuids[i]);
+ preselectedVocabularies.add(preselectedVocabulary);
+ }
+ selectedVocabularies.retainAll(preselectedVocabularies);
+ initModel();//re-init to consider pre-selected vocabularies
+ }
}
/** {@inheritDoc} */
super.fillViewMenu(menuManager);
- for(TermVocabulary<NamedArea> vocabulary : getVocabularies()){
+ for(TermVocabulary<NamedArea> vocabulary : getAvailableVocabularies()){
IncludeNamedAreaVocabulary action = new IncludeNamedAreaVocabulary(vocabulary);
menuManager.add(action);
- action.setChecked(true);
+ if(preselectedVocabularies==null || preselectedVocabularies.isEmpty() || preselectedVocabularies.contains(vocabulary)) {
+ action.setChecked(true);
+ }
}
}
/** {@inheritDoc} */
@Override
protected void init() {
- selectedVocabularies = getVocabularies();
+ selectedVocabularies = getAvailableVocabularies();
}
- private List<TermVocabulary<NamedArea>> getVocabularies(){
+ private List<TermVocabulary<NamedArea>> getAvailableVocabularies(){
List<TermVocabulary<NamedArea>> vocabularies = CdmStore.getService(IVocabularyService.class).listByTermClass(NamedArea.class, null, null, null, null);
vocabularies.add(CdmStore.getService(IVocabularyService.class).find(Country.uuidCountryVocabulary));
return vocabularies;
import org.eclipse.swt.widgets.Shell;
import eu.etaxonomy.cdm.api.conversation.ConversationHolder;
+import eu.etaxonomy.cdm.api.facade.DerivedUnitFacade;
import eu.etaxonomy.cdm.model.agent.AgentBase;
import eu.etaxonomy.cdm.model.agent.Institution;
import eu.etaxonomy.cdm.model.agent.Person;
import eu.etaxonomy.cdm.model.description.FeatureTree;
import eu.etaxonomy.cdm.model.description.PolytomousKey;
import eu.etaxonomy.cdm.model.description.PolytomousKeyNode;
+import eu.etaxonomy.cdm.model.location.Country;
import eu.etaxonomy.cdm.model.location.NamedArea;
import eu.etaxonomy.cdm.model.molecular.Amplification;
import eu.etaxonomy.cdm.model.molecular.Primer;
import eu.etaxonomy.cdm.model.taxon.TaxonBase;
import eu.etaxonomy.cdm.model.taxon.TaxonNode;
import eu.etaxonomy.taxeditor.model.MessagingUtils;
+import eu.etaxonomy.taxeditor.ui.element.ICdmFormElement;
+import eu.etaxonomy.taxeditor.ui.element.IEntityElement;
/**
* @author n.hoffmann
*/
public class SelectionDialogFactory {
- public static <T extends ICdmBase> T getSelectionFromDialog(Class<T> clazz, Shell shell, ConversationHolder conversation, T currentSelection){
+ public static <T extends ICdmBase> T getSelectionFromDialog(Class<T> clazz, Shell shell, ConversationHolder conversation, T currentSelection){
+ return getSelectionFromDialog(clazz, shell, conversation, currentSelection, null);
+ }
+
+ public static <T extends ICdmBase> T getSelectionFromDialog(Class<T> clazz, Shell shell, ConversationHolder conversation, T currentSelection, ICdmFormElement parentElement){
if(clazz.equals(Taxon.class)){
return (T) TaxonBaseSelectionDialog.selectTaxon(shell, conversation, (Taxon) currentSelection);
return (T) ClassificationSelectionDialog.select(shell, conversation, (Classification) currentSelection);
}
if(clazz.equals(TaxonNode.class)){
- return (T) TaxonNodeSelectionDialog.select(shell, conversation, null, null, (TaxonNode) currentSelection, null);
+ return (T) TaxonNodeSelectionDialog.select(shell, conversation, null, null, (TaxonNode) currentSelection, ((TaxonNode) currentSelection).getClassification());
}
if(clazz.equals(Reference.class)){
return (T) ReferenceSelectionDialog.select(shell, conversation, (Reference) currentSelection);
return (T) FieldUnitSelectionDialog.select(shell, conversation, (FieldUnit) currentSelection);
}
if(clazz.equals(NamedArea.class)){
- return (T) NamedAreaSelectionDialog.select(shell, conversation, (NamedArea) currentSelection);
+ if(parentElement instanceof IEntityElement && ((IEntityElement) parentElement).getEntity() instanceof DerivedUnitFacade){
+ return (T) NamedAreaSelectionDialog.select(shell, conversation, (NamedArea) currentSelection, Country.uuidCountryVocabulary);
+ }
+ else{
+ return (T) NamedAreaSelectionDialog.select(shell, conversation, (NamedArea) currentSelection);
+ }
}
if(clazz.equals(Collection.class)){
return (T) CollectionSelectionDialog.select(shell, conversation, (Collection) currentSelection);
// $Id$\r
/**\r
-* Copyright (C) 2007 EDIT\r
-* European Distributed Institute of Taxonomy \r
-* http://www.e-taxonomy.eu\r
-* \r
-* The contents of this file are subject to the Mozilla Public License Version 1.1\r
-* See LICENSE.TXT at the top of this package for the full license terms.\r
-*/\r
+ * Copyright (C) 2007 EDIT\r
+ * European Distributed Institute of Taxonomy\r
+ * http://www.e-taxonomy.eu\r
+ *\r
+ * The contents of this file are subject to the Mozilla Public License Version 1.1\r
+ * See LICENSE.TXT at the top of this package for the full license terms.\r
+ */\r
\r
package eu.etaxonomy.taxeditor.ui.dialog.selection;\r
\r
* @created Sep 21, 2009\r
* @version 1.0\r
*/\r
-public class TaxonBaseSelectionDialog extends\r
- AbstractFilteredCdmResourceSelectionDialog<TaxonBase> {\r
- \r
- \r
- /**\r
- * <p>select</p>\r
- *\r
- * @param shell a {@link org.eclipse.swt.widgets.Shell} object.\r
- * @param conversation a {@link eu.etaxonomy.cdm.api.conversation.ConversationHolder} object.\r
- * @return a {@link eu.etaxonomy.cdm.model.taxon.TaxonBase} object.\r
- */\r
- public static TaxonBase selectTaxonBase(Shell shell, ConversationHolder conversation) {\r
- AbstractFilteredCdmResourceSelectionDialog<TaxonBase> dialog = new TaxonBaseSelectionDialog(TaxonBase.class, shell, conversation,\r
- "Choose a taxon", false, null, null);\r
- return getSelectionFromDialog(dialog);\r
- }\r
- \r
- /**\r
- * <p>select</p>\r
- *\r
- * @param shell a {@link org.eclipse.swt.widgets.Shell} object.\r
- * @param conversation a {@link eu.etaxonomy.cdm.api.conversation.ConversationHolder} object.\r
- * @return a {@link eu.etaxonomy.cdm.model.taxon.TaxonBase} object.\r
- */\r
- public static Taxon selectTaxon(Shell shell, ConversationHolder conversation, Taxon taxonToBeFiltered) {\r
- \r
-\r
- AbstractFilteredCdmResourceSelectionDialog<TaxonBase> dialog = new TaxonBaseSelectionDialog(Taxon.class, shell, conversation,\r
- "Choose a taxon", false, null, taxonToBeFiltered);\r
- return (Taxon) getSelectionFromDialog(dialog);\r
- }\r
- \r
- /**\r
- * <p>select</p>\r
- *\r
- * @param shell a {@link org.eclipse.swt.widgets.Shell} object.\r
- * @param conversation a {@link eu.etaxonomy.cdm.api.conversation.ConversationHolder} object.\r
- * @return a {@link eu.etaxonomy.cdm.model.taxon.TaxonBase} object.\r
- */\r
- public static Synonym selectSynonym(Shell shell, ConversationHolder conversation) {\r
- AbstractFilteredCdmResourceSelectionDialog<TaxonBase> dialog = new TaxonBaseSelectionDialog(Synonym.class, shell, conversation,\r
- "Choose a taxon", false, null, null);\r
- return (Synonym) getSelectionFromDialog(dialog);\r
- }\r
-\r
- private final Class<? extends TaxonBase> clazz;\r
- \r
- /**\r
- * <p>Constructor for FilteredTaxonBaseSelectionDialog.</p>\r
- *\r
- * @param shell a {@link org.eclipse.swt.widgets.Shell} object.\r
- * @param title a {@link java.lang.String} object.\r
- * @param conversation a {@link eu.etaxonomy.cdm.api.conversation.ConversationHolder} object.\r
- * @param multi a boolean.\r
- * @param taxon a {@link eu.etaxonomy.cdm.model.taxon.TaxonBase} object.\r
- */\r
- protected TaxonBaseSelectionDialog(Class<? extends TaxonBase> clazz, Shell shell, ConversationHolder conversation, String title, boolean multi, TaxonBase taxon, TaxonBase taxonToBeFiltered) {\r
- super(shell, conversation, title, multi, ReferenceSelectionDialog.class.getCanonicalName(), taxon);\r
- this.cdmBaseToBeFiltered = taxonToBeFiltered;\r
-\r
- \r
- \r
- this.clazz = clazz;\r
- }\r
-\r
- /* (non-Javadoc)\r
- * @see org.eclipse.ui.dialogs.FilteredItemsSelectionDialog#createExtendedContentArea(org.eclipse.swt.widgets.Composite)\r
- */\r
- /** {@inheritDoc} */\r
- @Override\r
- protected Control createExtendedContentArea(Composite parent) {\r
- return null;\r
- }\r
-\r
- /* (non-Javadoc)\r
- * @see eu.etaxonomy.taxeditor.dialogs.AbstractFilteredCdmResourceSelectionDialog#getPersistentObject(java.util.UUID)\r
- */\r
- /** {@inheritDoc} */\r
- @Override\r
- protected TaxonBase getPersistentObject(UUID uuid) {\r
- return CdmStore.getService(ITaxonService.class).load(uuid);\r
- }\r
-\r
- /* (non-Javadoc)\r
- * @see eu.etaxonomy.taxeditor.dialogs.AbstractFilteredCdmResourceSelectionDialog#initModel()\r
- */\r
- /** {@inheritDoc} */\r
- @Override\r
- protected void initModel() {\r
- if(clazz == TaxonBase.class){\r
- model = CdmStore.getService(ITaxonService.class).getUuidAndTitleCache();\r
- }\r
- else if(clazz == Taxon.class){\r
- \r
- model = CdmStore.getService(ITaxonService.class).getUuidAndTitleCacheTaxon();\r
- \r
- }\r
- else if(clazz == Synonym.class){\r
- model = CdmStore.getService(ITaxonService.class).getUuidAndTitleCacheSynonym();\r
- }\r
- }\r
-\r
- /** {@inheritDoc} */\r
- @Override\r
- protected AbstractNewEntityWizard getNewEntityWizard(String parameter) {\r
- return null;\r
- }\r
-\r
- /** {@inheritDoc} */\r
- @Override\r
- protected String getNewWizardLinkText() {\r
- return null;\r
- }\r
+public class TaxonBaseSelectionDialog extends AbstractFilteredCdmResourceSelectionDialog<TaxonBase> {\r
+\r
+\r
+ /**\r
+ * <p>select</p>\r
+ *\r
+ * @param shell a {@link org.eclipse.swt.widgets.Shell} object.\r
+ * @param conversation a {@link eu.etaxonomy.cdm.api.conversation.ConversationHolder} object.\r
+ * @return a {@link eu.etaxonomy.cdm.model.taxon.TaxonBase} object.\r
+ */\r
+ public static TaxonBase selectTaxonBase(Shell shell, ConversationHolder conversation) {\r
+ AbstractFilteredCdmResourceSelectionDialog<TaxonBase> dialog = new TaxonBaseSelectionDialog(TaxonBase.class, shell, conversation,\r
+ "Choose a taxon", false, null, null);\r
+ return getSelectionFromDialog(dialog);\r
+ }\r
+\r
+ /**\r
+ * <p>select</p>\r
+ *\r
+ * @param shell a {@link org.eclipse.swt.widgets.Shell} object.\r
+ * @param conversation a {@link eu.etaxonomy.cdm.api.conversation.ConversationHolder} object.\r
+ * @return a {@link eu.etaxonomy.cdm.model.taxon.TaxonBase} object.\r
+ */\r
+ public static Taxon selectTaxon(Shell shell, ConversationHolder conversation, Taxon taxonToBeFiltered) {\r
+\r
+\r
+ AbstractFilteredCdmResourceSelectionDialog<TaxonBase> dialog = new TaxonBaseSelectionDialog(Taxon.class, shell, conversation,\r
+ "Choose a taxon", false, null, taxonToBeFiltered);\r
+ return (Taxon) getSelectionFromDialog(dialog);\r
+ }\r
+\r
+ /**\r
+ * <p>select</p>\r
+ *\r
+ * @param shell a {@link org.eclipse.swt.widgets.Shell} object.\r
+ * @param conversation a {@link eu.etaxonomy.cdm.api.conversation.ConversationHolder} object.\r
+ * @return a {@link eu.etaxonomy.cdm.model.taxon.TaxonBase} object.\r
+ */\r
+ public static Synonym selectSynonym(Shell shell, ConversationHolder conversation) {\r
+ AbstractFilteredCdmResourceSelectionDialog<TaxonBase> dialog = new TaxonBaseSelectionDialog(Synonym.class, shell, conversation,\r
+ "Choose a taxon", false, null, null);\r
+ return (Synonym) getSelectionFromDialog(dialog);\r
+ }\r
+\r
+ private final Class<? extends TaxonBase> clazz;\r
+\r
+ /**\r
+ * <p>Constructor for FilteredTaxonBaseSelectionDialog.</p>\r
+ *\r
+ * @param shell a {@link org.eclipse.swt.widgets.Shell} object.\r
+ * @param title a {@link java.lang.String} object.\r
+ * @param conversation a {@link eu.etaxonomy.cdm.api.conversation.ConversationHolder} object.\r
+ * @param multi a boolean.\r
+ * @param taxon a {@link eu.etaxonomy.cdm.model.taxon.TaxonBase} object.\r
+ */\r
+ protected TaxonBaseSelectionDialog(Class<? extends TaxonBase> clazz, Shell shell, ConversationHolder conversation, String title, boolean multi, TaxonBase taxon, TaxonBase taxonToBeFiltered) {\r
+ super(shell, conversation, title, multi, ReferenceSelectionDialog.class.getCanonicalName(), taxon);\r
+ this.cdmBaseToBeFiltered = taxonToBeFiltered;\r
+ this.clazz = clazz;\r
+ initModel();\r
+ }\r
+\r
+ /* (non-Javadoc)\r
+ * @see org.eclipse.ui.dialogs.FilteredItemsSelectionDialog#createExtendedContentArea(org.eclipse.swt.widgets.Composite)\r
+ */\r
+ /** {@inheritDoc} */\r
+ @Override\r
+ protected Control createExtendedContentArea(Composite parent) {\r
+ return null;\r
+ }\r
+\r
+ /* (non-Javadoc)\r
+ * @see eu.etaxonomy.taxeditor.dialogs.AbstractFilteredCdmResourceSelectionDialog#getPersistentObject(java.util.UUID)\r
+ */\r
+ /** {@inheritDoc} */\r
+ @Override\r
+ protected TaxonBase getPersistentObject(UUID uuid) {\r
+ return CdmStore.getService(ITaxonService.class).load(uuid);\r
+ }\r
+\r
+ /* (non-Javadoc)\r
+ * @see eu.etaxonomy.taxeditor.dialogs.AbstractFilteredCdmResourceSelectionDialog#initModel()\r
+ */\r
+ /** {@inheritDoc} */\r
+ @Override\r
+ protected void initModel() {\r
+ if(clazz == TaxonBase.class){\r
+ model = CdmStore.getService(ITaxonService.class).getUuidAndTitleCache();\r
+ }\r
+ else if(clazz == Taxon.class){\r
+\r
+ model = CdmStore.getService(ITaxonService.class).getUuidAndTitleCacheTaxon();\r
+\r
+ }\r
+ else if(clazz == Synonym.class){\r
+ model = CdmStore.getService(ITaxonService.class).getUuidAndTitleCacheSynonym();\r
+ }\r
+ }\r
+\r
+ /** {@inheritDoc} */\r
+ @Override\r
+ protected AbstractNewEntityWizard getNewEntityWizard(String parameter) {\r
+ return null;\r
+ }\r
+\r
+ /** {@inheritDoc} */\r
+ @Override\r
+ protected String getNewWizardLinkText() {\r
+ return null;\r
+ }\r
}\r
*/
package eu.etaxonomy.taxeditor.ui.dialog.selection;
+import java.util.Collections;
+import java.util.Comparator;
import java.util.List;
import java.util.UUID;
import eu.etaxonomy.taxeditor.store.CdmStore;
/**
- * <p>FilteredTaxonNodeSelectionDialog class.</p>
- *
* @author p.ciardelli
* @version $Id: $
*/
public class TaxonNodeSelectionDialog extends AbstractFilteredCdmResourceSelectionDialog<TaxonNode> implements SelectionListener{
- /**
- * <p>select</p>
- *
- * @param shell a {@link org.eclipse.swt.widgets.Shell} object.
- * @param conversation a {@link eu.etaxonomy.cdm.api.conversation.ConversationHolder} object.
- * @param title a {@link java.lang.String} object.
- * @param excludeTaxa a {@link java.util.List} object.
- * @param node a {@link eu.etaxonomy.cdm.model.taxon.TaxonNode} object.
- * @return a {@link eu.etaxonomy.cdm.model.taxon.TaxonNode} object.
- */
public static TaxonNode select(Shell shell, ConversationHolder conversation, String title, List<UUID> excludeTaxa, TaxonNode node, Classification classification) {
TaxonNodeSelectionDialog dialog = new TaxonNodeSelectionDialog(shell,
conversation,
private Classification selectedClassification;
- /**
- * <p>Constructor for FilteredTaxonNodeSelectionDialog.</p>
- *
- * @param shell a {@link org.eclipse.swt.widgets.Shell} object.
- * @param title a {@link java.lang.String} object.
- * @param conversation a {@link eu.etaxonomy.cdm.api.conversation.ConversationHolder} object.
- * @param excludeTaxa a {@link java.util.List} object.
- * @param multi a boolean.
- * @param node a {@link eu.etaxonomy.cdm.model.taxon.TaxonNode} object.
- */
protected TaxonNodeSelectionDialog(Shell shell, ConversationHolder conversation, String title, List<UUID> excludeTaxa, boolean multi, TaxonNode node, Classification classification) {
super(shell, conversation, title, multi, TaxonNodeSelectionDialog.class.getCanonicalName(), node);
}
}
-
- /* (non-Javadoc)
- * @see org.eclipse.ui.dialogs.FilteredItemsSelectionDialog#createExtendedContentArea(org.eclipse.swt.widgets.Composite)
- */
/** {@inheritDoc} */
@Override
protected Control createExtendedContentArea(Composite parent) {
return "";
}
- /* (non-Javadoc)
- * @see eu.etaxonomy.taxeditor.dialogs.AbstractFilteredCdmResourceSelectionDialog#getPersistentObject(java.util.UUID)
- */
/** {@inheritDoc} */
@Override
protected TaxonNode getPersistentObject(UUID uuid) {
return CdmStore.getService(IClassificationService.class).getTaxonNodeByUuid(uuid);
}
- /* (non-Javadoc)
- * @see eu.etaxonomy.taxeditor.dialogs.AbstractFilteredCdmResourceSelectionDialog#initModel()
- */
/** {@inheritDoc} */
@Override
protected void initModel() {
if(classifications == null){
classifications = CdmStore.getService(IClassificationService.class).list(null, null, null, null, null);
+ Collections.sort(classifications, new Comparator<Classification>() {
+
+ @Override
+ public int compare(Classification o1, Classification o2) {
+ return o1.getTitleCache().compareTo(o2.getTitleCache());
+ }
+ });
selectedClassification = classifications.iterator().next();
}
--- /dev/null
+// $Id$
+/**
+* Copyright (C) 2007 EDIT
+* European Distributed Institute of Taxonomy
+* http://www.e-taxonomy.eu
+*
+* The contents of this file are subject to the Mozilla Public License Version 1.1
+* See LICENSE.TXT at the top of this package for the full license terms.
+*/
+
+package eu.etaxonomy.taxeditor.ui.element;
+
+import org.eclipse.jface.resource.JFaceResources;
+import org.eclipse.swt.SWT;
+import org.eclipse.swt.widgets.Composite;
+import org.eclipse.swt.widgets.Display;
+import org.eclipse.swt.widgets.Label;
+import org.eclipse.ui.forms.widgets.TableWrapLayout;
+
+import eu.etaxonomy.taxeditor.Messages;
+
+/**
+ *
+ * @author pplitzner
+ * @date Sep 21, 2015
+ *
+ */
+public abstract class AbstractUriWithExceptionLabelElement <T> extends TextWithLabelElement {
+
+ protected Label labelException;
+
+ protected AbstractUriWithExceptionLabelElement(CdmFormFactory formFactory,
+ ICdmFormElement parentElement, String labelString,
+ T initialObject, Integer textHeight, int style) {
+ super(formFactory, parentElement, false);
+
+ init(formFactory, labelString, initialObject, textHeight, style);
+ }
+
+ protected void init(CdmFormFactory formFactory, String labelString, T initialObject, Integer textHeight, int style) {
+ //label
+ initLabel(formFactory, labelString, false, getLayoutComposite());
+
+ //uri text
+ initText(formFactory, null, textHeight, null, false, style, getLayoutComposite());
+
+ //exceptionLabel
+ initExceptionLabel(getLayoutComposite(), formFactory, initialObject);
+ }
+
+ protected void initExceptionLabel(Composite parent, CdmFormFactory formFactory, T initialObject) {
+ labelException = formFactory.createLabel(parent, "", SWT.WRAP); //$NON-NLS-1$
+ int numColumns = AbstractFormSection.DEFAULT_NUM_COLUMNS;
+ if(parent.getLayout() instanceof TableWrapLayout){
+ numColumns = ((TableWrapLayout)parent.getLayout()).numColumns;
+ }
+ labelException.setLayoutData(LayoutConstants.FILL_HORIZONTALLY(numColumns, 1));
+ addControl(labelException);
+ setParsedText(initialObject);
+ }
+
+
+ public abstract void setParsedText(T object);
+
+ protected abstract T getParsedText() throws Exception;
+
+ public T parseText(){
+ try {
+ labelException.setFont(JFaceResources.getFontRegistry().get(JFaceResources.DEFAULT_FONT));
+ labelException.setForeground(getPersistentBackground());
+ labelException.setText(""); //$NON-NLS-1$
+ return getParsedText();
+ } catch (Exception e) {
+ labelException.setFont(JFaceResources.getFontRegistry().getBold(JFaceResources.DEFAULT_FONT));
+ labelException.setForeground(Display.getCurrent().getSystemColor(SWT.COLOR_RED));
+ labelException.setText(Messages.UriWithLabelElement_URL_NOT_SAVED+e.getLocalizedMessage());
+ return null;
+ }
+ }
+
+}
import eu.etaxonomy.cdm.model.common.IEnumTerm;
import eu.etaxonomy.cdm.model.common.IdentifiableSource;
import eu.etaxonomy.cdm.model.common.Identifier;
+import eu.etaxonomy.cdm.model.common.LSID;
import eu.etaxonomy.cdm.model.common.Language;
import eu.etaxonomy.cdm.model.common.LanguageString;
import eu.etaxonomy.cdm.model.common.Marker;
import eu.etaxonomy.taxeditor.ui.section.occurrence.GatheringEventDetailElement;
import eu.etaxonomy.taxeditor.ui.section.occurrence.GatheringEventDetailSection;
import eu.etaxonomy.taxeditor.ui.section.occurrence.GeoScopeDetailSection;
+import eu.etaxonomy.taxeditor.ui.section.occurrence.GeoScopePolyKeyDetailSection;
import eu.etaxonomy.taxeditor.ui.section.occurrence.NamedAreaDetailElement;
import eu.etaxonomy.taxeditor.ui.section.occurrence.OriginalLabelDataSection;
import eu.etaxonomy.taxeditor.ui.section.occurrence.SourceCollectionDetailSection;
return element;
}
+ public LsidWithExceptionLabelElement createLsidWithExceptionLabelElement(ICdmFormElement parentElement, String labelString,
+ LSID initialLsid, int style) {
+ LsidWithExceptionLabelElement element = new LsidWithExceptionLabelElement(this, parentElement, labelString, initialLsid, null, style);
+ adapt(element);
+ parentElement.addElement(element);
+ return element;
+ }
+
public UriWithLabelElement createUriWithLabelElement(ICdmFormElement parentElement, String labelString,
URI initialUri, int style) {
UriWithLabelElement element = new UriWithLabelElement(this, parentElement, labelString, initialUri, null, style);
return section;
}
+ public GeoScopePolyKeyDetailSection createGeoScopePolyKeyDetailSection(ConversationHolder conversation, ICdmFormElement parentElement, int style){
+ GeoScopePolyKeyDetailSection section = new GeoScopePolyKeyDetailSection(this, conversation, parentElement, style);
+ addAndAdaptSection(parentElement, section);
+ return section;
+ }
+
public IdentifierDetailSection createIdentifierDetailSection(ConversationHolder conversation, ICdmFormElement parentElement, int style){
IdentifierDetailSection section = new IdentifierDetailSection(this, conversation, parentElement, style);
addAndAdaptSection(parentElement, section);
// $Id$
/**
* Copyright (C) 2007 EDIT
-* European Distributed Institute of Taxonomy
+* European Distributed Institute of Taxonomy
* http://www.e-taxonomy.eu
-*
+*
* The contents of this file are subject to the Mozilla Public License Version 1.1
* See LICENSE.TXT at the top of this package for the full license terms.
*/
/**
- * <p>ISelectableElement interface.</p>
+ * Implementors of this interface provide a {@link SelectionArbitrator}.<br>
+ * The arbitrator allows the element to be selected to show e.g.
+ * supplemental data.<br>
+ * An arbitrator can be added like in the following code example:
+ * <br>
+ * <br>
+ * <pre>
+ * //make element selectable
+ * if(cdmFormFactory.getSelectionProvider() != null){
+ * selectionArbitrator = cdmFormFactory.createSelectionArbitrator(this);
+ * }
+ * </pre>
*
* @author n.hoffmann
* @created Mar 5, 2010
// $Id$
/**
* Copyright (C) 2007 EDIT
- * European Distributed Institute of Taxonomy
+ * European Distributed Institute of Taxonomy
* http://www.e-taxonomy.eu
- *
+ *
* The contents of this file are subject to the Mozilla Public License Version 1.1
* See LICENSE.TXT at the top of this package for the full license terms.
*/
import org.eclipse.jface.util.PropertyChangeEvent;
+import eu.etaxonomy.cdm.model.common.LanguageString;
import eu.etaxonomy.cdm.model.description.KeyStatement;
/**
/**
* @return the keyStatement
*/
- public KeyStatement getKeyStatement() {
- return keyStatement;
+ public KeyStatement updateKeyStatement(KeyStatement ks) {
+ keyStatement = ks;
+ if(keyStatement == null) {
+ keyStatement = KeyStatement.NewInstance(element_languageString.getLanguageString().getLanguage(),
+ element_languageString.getLanguageString().getText());
+
+ } else {
+ LanguageString languageString = keyStatement.getLabel().get(element_languageString.getLanguageString().getLanguage());
+ if(languageString != null) {
+ languageString.setText(element_languageString.getText());
+ } else {
+ keyStatement.getLabel().put(element_languageString.getLanguageString().getLanguage(),
+ element_languageString.getLanguageString());
+ }
+ }
+ return keyStatement;
}
+
/*
* (non-Javadoc)
- *
+ *
* @see
* eu.etaxonomy.taxeditor.ui.forms.MultilanguageTextElement#propertyChange
* (org.eclipse.jface.util.PropertyChangeEvent)
if (event == null) {
return;
}
-
+
if (keyStatement == null) {
Object eventSource = event.getSource();
if (eventSource == element_languageString) {
-
+
if(element_languageString.getLanguageString() != null) {
- // for the case when the user copy / pastes text into the
+ // for the case when the user copy / pastes text into the
// (LanguageStringWithLabelElement) element_languageString text field
setKeyStatement(KeyStatement.NewInstance(element_languageString.getLanguageString().getLanguage(),
element_languageString.getLanguageString().getText()));
} else {
- setKeyStatement(KeyStatement.NewInstance());
+ //setKeyStatement(KeyStatement.NewInstance());
}
}
}
-
+
super.propertyChange(event);
-
+
}
}
return languageString;
}
+ public LanguageString updateLanguageString(LanguageString ls) {
+ if(ls == null){
+ ls = LanguageString.NewInstance("", CdmStore.getDefaultLanguage());
+ }
+ ls.setText(text.getText());
+ return ls;
+ }
+
/** {@inheritDoc} */
@Override
public void modifyText(ModifyEvent e) {
--- /dev/null
+// $Id$
+/**
+* Copyright (C) 2007 EDIT
+* European Distributed Institute of Taxonomy
+* http://www.e-taxonomy.eu
+*
+* The contents of this file are subject to the Mozilla Public License Version 1.1
+* See LICENSE.TXT at the top of this package for the full license terms.
+*/
+
+package eu.etaxonomy.taxeditor.ui.element;
+
+import eu.etaxonomy.cdm.model.common.LSID;
+
+/**
+ *
+ * @author pplitzner
+ * @date Sep 21, 2015
+ *
+ */
+public class LsidWithExceptionLabelElement extends AbstractUriWithExceptionLabelElement<LSID> {
+
+ protected LsidWithExceptionLabelElement(CdmFormFactory formFactory, ICdmFormElement parentElement,
+ String labelString, LSID initialObject, Integer textHeight, int style) {
+ super(formFactory, parentElement, labelString, initialObject, textHeight, style);
+ }
+
+ /**
+ * {@inheritDoc}
+ */
+ @Override
+ public void setParsedText(LSID object) {
+ if(object != null){
+ super.setText(object.toString());
+ }
+ }
+
+ /**
+ * {@inheritDoc}
+ */
+ @Override
+ public LSID getParsedText() throws Exception {
+ return new LSID(super.getText());
+ }
+
+}
this.multilanguageText = multilanguageText;
if (multilanguageText != null) {
- if (multilanguageText.isEmpty()) {
- multilanguageText.put(
- CdmStore.getDefaultLanguage(),
- LanguageString.NewInstance("",
- CdmStore.getDefaultLanguage()));
- }
if (PreferencesUtil.isMultilanguageTextEditingCapability()) {
combo_language.setTerms(getLanguages());
button.setEnabled(false);
import org.eclipse.core.runtime.IStatus;
import org.eclipse.core.runtime.Status;
-import org.eclipse.jface.resource.JFaceResources;
import org.eclipse.swt.SWT;
import org.eclipse.swt.events.SelectionAdapter;
import org.eclipse.swt.events.SelectionEvent;
import org.eclipse.swt.widgets.Button;
import org.eclipse.swt.widgets.Composite;
-import org.eclipse.swt.widgets.Display;
-import org.eclipse.swt.widgets.Label;
import org.eclipse.ui.PartInitException;
import org.eclipse.ui.PlatformUI;
-import org.eclipse.ui.forms.widgets.TableWrapLayout;
import eu.etaxonomy.taxeditor.Messages;
import eu.etaxonomy.taxeditor.model.ImageResources;
* @created Dec 20, 2010
* @version 1.0
*/
-public class UriWithLabelElement extends TextWithLabelElement {
+public class UriWithLabelElement extends AbstractUriWithExceptionLabelElement<URI> {
- private final Label labelException;
- private final Button btnOpenBrowser;
+ private Button btnOpenBrowser;
- protected UriWithLabelElement(CdmFormFactory formFactory,
- ICdmFormElement parentElement, String labelString,
- URI initialUri, Integer textHeight, int style) {
- super(formFactory, parentElement, false);
+ protected UriWithLabelElement(CdmFormFactory formFactory, ICdmFormElement parentElement, String labelString,
+ URI initialObject, Integer textHeight, int style) {
+ super(formFactory, parentElement, labelString, initialObject, textHeight, style);
- //label
+ }
+
+ /**
+ * {@inheritDoc}
+ */
+ @Override
+ protected void init(CdmFormFactory formFactory, String labelString, URI initialObject, Integer textHeight, int style) {
+
+ //label
initLabel(formFactory, labelString, false, getLayoutComposite());
//composite(uri + button)
initText(formFactory, null, textHeight, null, false, style, textAndButton);
//button
- btnOpenBrowser = formFactory.createButton(textAndButton, "", SWT.NONE); //$NON-NLS-1$
- btnOpenBrowser.setImage(ImageResources.getImage(ImageResources.WEB));
- btnOpenBrowser.setToolTipText(Messages.UriWithLabelElement_OPEN_EXTERNAL_BROWSER);
- btnOpenBrowser.addSelectionListener(new SelectionAdapter() {
- @Override
- public void widgetSelected(SelectionEvent e) {
- String errorTitle = Messages.UriWithLabelElement_INVALID_URL;
- String errorText = Messages.UriWithLabelElement_COULD_NOT_OPEN_BROWSER;
-
- URI uri = getUri();
- if(uri!=null){
- try {
+ btnOpenBrowser = formFactory.createButton(textAndButton, "", SWT.NONE); //$NON-NLS-1$
+ btnOpenBrowser.setImage(ImageResources.getImage(ImageResources.WEB));
+ btnOpenBrowser.setToolTipText(Messages.UriWithLabelElement_OPEN_EXTERNAL_BROWSER);
+ btnOpenBrowser.addSelectionListener(new SelectionAdapter() {
+ @Override
+ public void widgetSelected(SelectionEvent e) {
+ String errorTitle = Messages.UriWithLabelElement_INVALID_URL;
+ String errorText = Messages.UriWithLabelElement_COULD_NOT_OPEN_BROWSER;
+
+ URI uri = parseText();
+ if(uri!=null){
+ try {
PlatformUI.getWorkbench().getBrowserSupport().getExternalBrowser().openURL(uri.toURL());
} catch (PartInitException pie) {
MessagingUtils.informationDialog(errorTitle, new Status(IStatus.WARNING, TaxeditorStorePlugin.PLUGIN_ID, errorText, pie));
} catch (IllegalArgumentException iae) {
MessagingUtils.informationDialog(errorTitle, new Status(IStatus.WARNING, TaxeditorStorePlugin.PLUGIN_ID, errorText, iae));
}
- }
- else{
- MessagingUtils.informationDialog(errorTitle, new Status(IStatus.WARNING, TaxeditorStorePlugin.PLUGIN_ID, errorText, null));
- }
- }
+ }
+ else{
+ MessagingUtils.informationDialog(errorTitle, new Status(IStatus.WARNING, TaxeditorStorePlugin.PLUGIN_ID, errorText, null));
+ }
+ }
});
- btnOpenBrowser.setLayoutData(LayoutConstants.RIGHT());
-
- labelException = formFactory.createLabel(getLayoutComposite(), "", SWT.WRAP); //$NON-NLS-1$
- int numColumns = AbstractFormSection.DEFAULT_NUM_COLUMNS;
- if(getLayoutComposite().getLayout() instanceof TableWrapLayout){
- numColumns = ((TableWrapLayout)getLayoutComposite().getLayout()).numColumns;
- }
- labelException.setLayoutData(LayoutConstants.FILL_HORIZONTALLY(numColumns, 1));
- addControl(labelException);
- setUri(initialUri);
- }
+ btnOpenBrowser.setLayoutData(LayoutConstants.RIGHT());
+
+ initExceptionLabel(getLayoutComposite(), formFactory, initialObject);
+ }
- public void setUri(URI uri) {
- if(uri != null){
- super.setText(uri.toString());
- }
- }
- public URI getUri(){
- try {
- labelException.setFont(JFaceResources.getFontRegistry().get(JFaceResources.DEFAULT_FONT));
- labelException.setForeground(getPersistentBackground());
- labelException.setText(""); //$NON-NLS-1$
- return new URI(super.getText());
- } catch (Exception e) {
- labelException.setFont(JFaceResources.getFontRegistry().getBold(JFaceResources.DEFAULT_FONT));
- labelException.setForeground(Display.getCurrent().getSystemColor(SWT.COLOR_RED));
- labelException.setText(Messages.UriWithLabelElement_URL_NOT_SAVED+e.getLocalizedMessage());
- return null;
+
+ /**
+ * {@inheritDoc}
+ */
+ @Override
+ public void setParsedText(URI object) {
+ if(object != null){
+ super.setText(object.toString());
}
- }
+ }
+
+ /**
+ * {@inheritDoc}
+ */
+ @Override
+ protected URI getParsedText() throws Exception {
+ return new URI(super.getText());
+ }
}
// change others passwords
CdmStore.getService(IUserService.class).changePasswordForUser(user.getUsername(), passwordPage.getNewPassword());
}
+ CdmStore.getService(IUserService.class).loadWithUpdate(user.getUuid());
internalConversation.commit(false);
internalConversation.unbind();
internalConversation.close();
return false;
}catch (AuthenticationException e){
MessagingUtils.warningDialog("Could not change password", this, "The old password is not correct.");
-
+
return false;
}catch(Exception e){
MessagingUtils.warningDialog("Problem with changing password", this, "The password could not be changed. " + e.getMessage());
selection_parentTaxonNode = formFactory
.createTaxonNodeSelectionElement(getConversationHolder(), formElement, "Parent", null,
EntitySelectionElement.DELETABLE, style);
- selection_SecRef = formFactory
- .createSelectionElement(Reference.class,getConversationHolder(), formElement, "Secundum Reference", null,
- EntitySelectionElement.DELETABLE, style);
+
selection_reuseExistingTaxon = formFactory
.createSelectionElement(Taxon.class,
getConversationHolder(), formElement,
getConversationHolder(), formElement,
"Reuse existing name", null,
EntitySelectionElement.DELETABLE, style);
-
+ selection_SecRef = formFactory
+ .createSelectionElement(Reference.class,getConversationHolder(), formElement, "Secundum Reference", null,
+ EntitySelectionElement.DELETABLE, style);
textNewTaxonName = formFactory.createTextWithLabelElement(formElement,
"New Taxon", "", style);
textNewTaxonName.setFocus();
textNewTaxonName.setEnabled(enabled);
if (!enabled){
setTaxon(selection_reuseExistingTaxon.getEntity());
+ } else{
+ textNewTaxonName.setText(null);
}
complete = !textNewTaxonName.getText().isEmpty();
} else if (eventSource == selection_reuseExistingName) {
- boolean enabled = selection_reuseExistingName.getEntity() == null;
+ boolean enabled = selection_reuseExistingName.getEntity() == null;
+ setTaxon(selection_reuseExistingName.getEntity());
selection_reuseExistingTaxon.setEnabled(enabled);
textNewTaxonName.setEnabled(enabled);
setTaxon(selection_reuseExistingName.getEntity());
+
complete = !textNewTaxonName.getText().isEmpty();
} else if (eventSource == textNewTaxonName) {
boolean enabled = CdmUtils.isBlank(textNewTaxonName.getText());
selection_classification.setEntity(classification);
selection_parentTaxonNode.setEntity(null);
selection_parentTaxonNode.setClassification(classification);
+ selection_SecRef.setEntity(classification.getReference());
} else if (parentTreeNode instanceof TaxonNode) {
classification = (Classification) HibernateProxyHelper
.deproxy(((TaxonNode) parentTreeNode).getClassification());
selection_classification.setEntity(classification);
selection_parentTaxonNode.setEntity((TaxonNode) parentTreeNode);
selection_parentTaxonNode.setClassification(classification);
+ selection_SecRef.setEntity(((TaxonNode)parentTreeNode).getTaxon().getSec());
} else if(parentTreeNode == null){
this.parentTreeNode = selection_classification.getEntity();
}
private void setTaxon(Taxon taxon) {
this.taxon = taxon;
textNewTaxonName.setText(taxon.getName().getTitleCache());
- this.secReference = taxon.getSec();
+ selection_SecRef.setEntity(taxon.getSec());
}
private void setTaxon(String taxonNameString) {
if (getParentTreeNode() != null) {
if (this.secReference != null){
secundum = this.secReference;
- } else if (getParentTreeNode() instanceof Classification) {
+ } /*else if (getParentTreeNode() instanceof Classification) {
secundum = ((Classification) getParentTreeNode())
.getReference();
} else if (getParentTreeNode() instanceof TaxonNode) {
secundum = ((TaxonNode) getParentTreeNode()).getTaxon()
.getSec();
- }
+ }*/
+ }
+ if (taxonName != null){
+ taxon = Taxon.NewInstance(taxonName, secundum);
+ if (!taxonName.getTitleCache().trim().equals(textNewTaxonName.getText().trim())){
+ textNewTaxonName.setText(taxonName.getTitleCache());
+ }
+ } else {
+ textNewTaxonName.setText(null);
}
- taxon = Taxon.NewInstance(taxonName, secundum);
}
private void setOpenInEditor(boolean openInEditor) {
/**
- *
+ *
*/
package eu.etaxonomy.taxeditor.ui.section.description;
import eu.etaxonomy.cdm.model.common.OriginalSourceType;
import eu.etaxonomy.cdm.model.description.DescriptionElementBase;
import eu.etaxonomy.cdm.model.description.DescriptionElementSource;
+import eu.etaxonomy.taxeditor.model.MessagingUtils;
import eu.etaxonomy.taxeditor.ui.element.CdmFormFactory;
import eu.etaxonomy.taxeditor.ui.element.ICdmFormElement;
import eu.etaxonomy.taxeditor.ui.section.AbstractEntityCollectionSection;
/** {@inheritDoc} */
@Override
public DescriptionElementSource createNewElement() {
+ if(getEntity().getId() == 0) {
+ MessagingUtils.warningDialog("Description not saved", this, "Please save the newly created description before adding source");
+ return null;
+ }
return DescriptionElementSource.NewInstance(OriginalSourceType.PrimaryTaxonomicSource);
}
import org.eclipse.swt.SWT;
import org.eclipse.swt.widgets.Label;
+import eu.etaxonomy.cdm.api.application.CdmApplicationRemoteConfiguration;
import eu.etaxonomy.cdm.common.UriUtils;
+import eu.etaxonomy.cdm.ext.geo.IEditGeoService;
import eu.etaxonomy.cdm.model.common.Language;
import eu.etaxonomy.cdm.model.description.PresenceAbsenceTerm;
import eu.etaxonomy.cdm.model.description.TaxonDescription;
List<Language> languages = Arrays.asList(new Language[]{CdmStore.getDefaultLanguage()});
- String parameter = CdmStore.getGeoService().getDistributionServiceRequestParameterString(
+ IEditGeoService editGeoService = ((CdmApplicationRemoteConfiguration)CdmStore.getCurrentApplicationConfiguration()).getEditGeoService();
+ String parameter = editGeoService.getDistributionServiceRequestParameterString(
getTaxonDescriptions(),
- false,
- false,
-
+ false,
+ false,
null,
- presenceAbsenceTermColors,
+ presenceAbsenceTermColors,
languages);
String mapUriString = String.format("%s?%s&ms=1000&bbox=-180,-90,180,90&l=earth", accessPoint, parameter);
*/
package eu.etaxonomy.taxeditor.ui.section.key;
+import org.eclipse.swt.SWT;
+
import eu.etaxonomy.cdm.model.description.PolytomousKey;
import eu.etaxonomy.taxeditor.ui.element.CdmFormFactory;
import eu.etaxonomy.taxeditor.ui.element.CdmPropertyChangeEvent;
import eu.etaxonomy.taxeditor.ui.element.ICdmFormElement;
+import eu.etaxonomy.taxeditor.ui.element.LayoutConstants;
import eu.etaxonomy.taxeditor.ui.element.NumberWithLabelElement;
import eu.etaxonomy.taxeditor.ui.element.TextWithLabelElement;
import eu.etaxonomy.taxeditor.ui.section.AbstractCdmDetailElement;
+import eu.etaxonomy.taxeditor.ui.section.occurrence.GeoScopePolyKeyDetailSection;
/**
* @author n.hoffmann
private TextWithLabelElement textLabel;
private NumberWithLabelElement numberStartNumber;
+ private TaxonomicScopeSection sectionTaxonomicScope;
+ private GeoScopePolyKeyDetailSection sectionGeoScopes;
public PolytomousKeyDetailElement(CdmFormFactory formFactory,
ICdmFormElement formElement) {
protected void createControls(ICdmFormElement formElement,
PolytomousKey entity, int style) {
textLabel = formFactory.createTextWithLabelElement(formElement, "Title", entity.getTitleCache(), style);
- numberStartNumber = formFactory.createNumberTextWithLabelElement(formElement, "Start Number", entity.getStartNumber(), style);
+
+ numberStartNumber = formFactory.createNumberTextWithLabelElement(formElement, "Start Number", entity.getStartNumber(), style);
+
+ sectionTaxonomicScope = formFactory.createTaxonomicScopeSection(getConversationHolder(), formElement, style);
+ sectionTaxonomicScope.setLayoutData(LayoutConstants.FILL_HORIZONTALLY(2, 1));
+ sectionTaxonomicScope.setEntity(entity);
+
+ sectionGeoScopes = formFactory.createGeoScopePolyKeyDetailSection(getConversationHolder(), formElement, SWT.NULL);
+ sectionGeoScopes.setLayoutData(LayoutConstants.FILL_HORIZONTALLY(2, 1));
+ sectionGeoScopes.setEntity(entity);
}
public String getText() {
return textLabel.getText();
}
- /*
- * (non-Javadoc)
- *
- * @see
- * eu.etaxonomy.taxeditor.section.AbstractCdmDetailElement#handleEvent(java
- * .lang.Object)
- */
@Override
public void handleEvent(Object eventSource) {
if(eventSource==textLabel){
/**
- *
+ *
*/
package eu.etaxonomy.taxeditor.ui.section.key;
/**
* @author n.hoffmann
- *
+ *
*/
public class PolytomousKeyNodeDetailElement extends
AbstractCdmDetailElement<PolytomousKeyNode> {
/*
* (non-Javadoc)
- *
+ *
* @see
* eu.etaxonomy.taxeditor.section.AbstractCdmDetailElement#handleEvent(java
* .lang.Object)
@Override
public void handleEvent(Object eventSource) {
if (eventSource == element_question) {
- getEntity().getParent().setQuestion(
- element_question.getKeyStatement());
+ getEntity().getParent().setQuestion(element_question.updateKeyStatement(getEntity().getQuestion()));
} else if (eventSource == element_statement) {
- getEntity().setStatement(element_statement.getKeyStatement());
+ getEntity().getParent().setStatement(element_statement.updateKeyStatement(getEntity().getStatement()));
} else if (eventSource == selection_feature) {
getEntity().getParent().setFeature(selection_feature.getEntity());
} else if (eventSource == selection_taxon) {
public void handleEvent(Object eventSource) {
if(eventSource == text_uri){
try {
- URI uri = text_uri.getUri();
+ URI uri = text_uri.parseText();
getEntity().setUri(uri);
if(uri==null){
//buffer URI if parsing error occurred
public void handleEvent(Object eventSource){
if(eventSource==textUri){
textUri.setBackground(getPersistentBackground());
- URI uri = textUri.getUri();
+ URI uri = textUri.parseText();
singleMediaRepresentationPart.setUri(uri);
if(uri==null){
uriBuffer=textUri.getText();
}
textUri = formFactory.createUriWithLabelElement(parentFormElement, "Media URI", null, style);
URI uri = singleMediaRepresentationPart.getUri();
- textUri.setUri(uri);
+ textUri.setParsedText(uri);
//set buffered uri as text if uri had parsing problems in advanced view
if(uri==null && uriBuffer!=null){
textUri.setText(uriBuffer);
- textUri.getUri();
+ textUri.parseText();
}
textUri.getLayoutComposite().layout();
}
import eu.etaxonomy.taxeditor.ui.element.AbstractFormSection;
import eu.etaxonomy.taxeditor.ui.element.CdmFormFactory;
import eu.etaxonomy.taxeditor.ui.element.ICdmFormElement;
+import eu.etaxonomy.taxeditor.ui.element.ISelectableElement;
import eu.etaxonomy.taxeditor.ui.element.LanguageStringWithLabelElement;
+import eu.etaxonomy.taxeditor.ui.element.SelectionArbitrator;
import eu.etaxonomy.taxeditor.ui.section.AbstractCdmDetailSection;
import eu.etaxonomy.taxeditor.ui.section.AbstractEntityCollectionElement;
import eu.etaxonomy.taxeditor.ui.selection.EntitySelectionElement;
* @created Nov 17, 2009
* @version 1.0
*/
-public class MediaMetaElement extends AbstractEntityCollectionElement<Media> implements ITogglableMediaElement{
+public class MediaMetaElement extends AbstractEntityCollectionElement<Media> implements ISelectableElement, ITogglableMediaElement{
private EntitySelectionElement<AgentBase> selection_artist;
private LanguageStringWithLabelElement text_description;
private LanguageStringWithLabelElement text_title;
private MediaDetailElement mediaDetailElement;
+ private SelectionArbitrator selectionArbitrator;
public MediaMetaElement(CdmFormFactory cdmFormFactory,
AbstractFormSection<?> formElement, Media element,
SelectionListener removeListener, boolean isChoosableEntity, int style) {
super(cdmFormFactory, formElement, element, removeListener, isChoosableEntity, null, style);
+ //make element selectable
+ if(cdmFormFactory.getSelectionProvider() != null){
+ selectionArbitrator = cdmFormFactory.createSelectionArbitrator(this);
+ }
}
/** {@inheritDoc} */
}
}
+ @Override
+ public SelectionArbitrator getSelectionArbitrator() {
+ return selectionArbitrator;
+ }
+
}
text_size.setText(FileUtils.byteCountToDisplaySize(entity.getSize()));
}
if(entity.getUri() != null){
- text_uri.setUri(entity.getUri());
+ text_uri.setParsedText(entity.getUri());
} else {
String uriBuffer = getParentMediaDetailElement().getUriBuffer();
if(uriBuffer!=null){
text_uri.setText(uriBuffer);
- text_uri.getUri();//just to update the error label
+ text_uri.parseText();//just to update the error label
}
}
}
@Override
public void handleEvent(Object eventSource) {
if(eventSource == text_uri){
- URI uri = text_uri.getUri();
+ URI uri = text_uri.parseText();
getEntity().setUri(uri);
if(uri==null){
//buffer URI if parsing error occurred
public NameDetailElement(CdmFormFactory cdmFormFactory, ICdmFormElement formElement,
int style) {
super(cdmFormFactory, formElement);
- // register as selection listener
+ // make this element selectable
if(cdmFormFactory.getSelectionProvider() != null){
selectionArbitrator = cdmFormFactory.createSelectionArbitrator(this);
}
import eu.etaxonomy.taxeditor.ui.element.CdmFormFactory;
import eu.etaxonomy.taxeditor.ui.element.ICdmFormElement;
import eu.etaxonomy.taxeditor.ui.element.LayoutConstants;
+import eu.etaxonomy.taxeditor.ui.element.LsidWithExceptionLabelElement;
import eu.etaxonomy.taxeditor.ui.section.AbstractCdmDetailSection;
import eu.etaxonomy.taxeditor.ui.section.AbstractIdentifiableEntityDetailElement;
private AuthorshipDetailSection section_author;
private EnumComboElement<NomenclaturalCode> combo_nomenclaturalCode;
private HybridDetailSection section_hybrid;
+ private LsidWithExceptionLabelElement textLsid;
public NonViralNameDetailElement(CdmFormFactory formFactory,
ICdmFormElement formElement) {
addControl(section_hybrid);
addElement(section_hybrid);
}
+
+ textLsid = formFactory.createLsidWithExceptionLabelElement(formElement, "Lsid", entity.getLsid(), style);
}
/** {@inheritDoc} */
section_name.setEntity(getEntity());
getLayoutComposite().layout();
}
+ else if(eventSource==textLsid){
+ getEntity().setLsid(textLsid.parseText());
+ }
}
}
@Override
public void handleEvent(Object eventSource) {
if(eventSource == protologueUriText && protologueUriText.getText()!=null){
- mediaRepresentationPart.setUri(protologueUriText.getUri());
+ mediaRepresentationPart.setUri(protologueUriText.parseText());
}
}
*/
public class DerivedUnitBaseWizardPage extends AbstractCdmEntityWizardPage<DerivedUnitFacade> {
- /**
- * @param formFactory
- * @param conversation
- * @param entity
- */
public DerivedUnitBaseWizardPage(CdmFormFactory formFactory,
ConversationHolder conversation, DerivedUnitFacade entity) {
super(formFactory, conversation, entity);
setPageComplete(true);
}
- /* (non-Javadoc)
- * @see eu.etaxonomy.taxeditor.ui.forms.AbstractCdmEntityWizardPage#checkComplete()
- */
@Override
protected void checkComplete() {
setPageComplete(true);
}
- /* (non-Javadoc)
- * @see eu.etaxonomy.taxeditor.forms.AbstractCdmEntityWizardPage#createElement(eu.etaxonomy.taxeditor.forms.ICdmFormElement)
- */
@Override
public AbstractCdmDetailElement<DerivedUnitFacade> createElement(ICdmFormElement rootElement) {
DerivedUnitBaseDetailElement detailElement = formFactory.createDerivedUnitBaseDetailElement(rootElement);
AbstractCdmDetailElement<DerivedUnitFacade> {
boolean showOnlyDerivedUnitData = false;
+ //TODO: flag to disable specimen type dropdown (#5244)
+ boolean showSpecimenType = true;
private ToggleableTextElement toggleableText_titleCache;
private EnumComboElement<SpecimenOrObservationType> combo_specorobstype;
super(formFactory, formElement);
}
- /*
- * (non-Javadoc)
- *
- * @see
- * eu.etaxonomy.taxeditor.section.AbstractCdmDetailElement#createControls
- * (eu.etaxonomy.taxeditor.forms.ICdmFormElement, java.lang.Object, int)
- */
@Override
protected void createControls(ICdmFormElement formElement,
DerivedUnitFacade entity, int style) {
else{
combo_specorobstype = formFactory.createEnumComboElement(SpecimenOrObservationType.class, formElement, style);
combo_specorobstype.setSelection(entity.getType());
+ combo_specorobstype.setEnabled(showSpecimenType);
selection_country = formFactory.createSelectionElement(NamedArea.class, getConversationHolder(),
formElement, "Country",
entity.getCountry(), EntitySelectionElement.NOTHING, style);
}
- /*
- * (non-Javadoc)
- *
- * @see
- * eu.etaxonomy.taxeditor.section.AbstractCdmDetailElement#handleEvent(java
- * .lang.Object)
- */
@Override
public void handleEvent(Object eventSource) {
if (eventSource == toggleableText_titleCache) {
this.showOnlyDerivedUnitData = showOnlyDerivedUnitData;
}
+ public void setShowSpecimenType(boolean showSpecimenType) {
+ this.showSpecimenType = showSpecimenType;
+ }
+
}
*/
public class DerivedUnitGeneralWizardPage extends AbstractCdmEntityWizardPage<DerivedUnitFacade> {
- /**
- * @param formFactory
- * @param conversation
- * @param entity
- */
public DerivedUnitGeneralWizardPage(CdmFormFactory formFactory,
ConversationHolder conversation, DerivedUnitFacade entity) {
super(formFactory, conversation, entity);
setTitle("General Specimen Data");
}
- /* (non-Javadoc)
- * @see eu.etaxonomy.taxeditor.ui.forms.AbstractCdmEntityWizardPage#checkComplete()
- */
@Override
protected void checkComplete() {
setPageComplete(true);
}
- /* (non-Javadoc)
- * @see eu.etaxonomy.taxeditor.forms.AbstractCdmEntityWizardPage#createElement(eu.etaxonomy.taxeditor.forms.ICdmFormElement)
- */
@Override
public AbstractCdmDetailElement<DerivedUnitFacade> createElement(ICdmFormElement rootElement) {
DerivedUnitGeneralDetailElement detailElement = formFactory.createDerivedUnitGeneralDetailElement(rootElement);
+ detailElement.setShowSpecimenType(false);
detailElement.setEntity(getEntity());
checkComplete();
return detailElement;
} else if (eventSource == selection_country) {
getEntity().setCountry(selection_country.getSelection());
} else if (eventSource == languageText_locality) {
- LanguageString locality = languageText_locality.getLanguageString();
+ LanguageString locality = languageText_locality.updateLanguageString(getEntity().getLocality());
getEntity().setLocality(locality);
} else if (eventSource == element_point) {
getEntity().setExactLocation(element_point.getPoint());
*/
public class FieldUnitWizardPage extends AbstractCdmEntityWizardPage<DerivedUnitFacade> {
- /**
- * @param formFactory
- * @param conversation
- * @param entity
- */
public FieldUnitWizardPage(CdmFormFactory formFactory,
ConversationHolder conversation, DerivedUnitFacade entity) {
super(formFactory, conversation, entity);
setPageComplete(true);
}
- /* (non-Javadoc)
- * @see eu.etaxonomy.taxeditor.ui.forms.AbstractCdmEntityWizardPage#checkComplete()
- */
@Override
protected void checkComplete() {
setPageComplete(true);
}
- /* (non-Javadoc)
- * @see eu.etaxonomy.taxeditor.forms.AbstractCdmEntityWizardPage#createElement(eu.etaxonomy.taxeditor.forms.ICdmFormElement)
- */
@Override
public AbstractCdmDetailElement<DerivedUnitFacade> createElement(ICdmFormElement rootElement) {
FieldUnitDetailElement detailElement = formFactory.createFieldUnitDetailElement(rootElement);
*/
public class GatheringEventWizardPage extends AbstractCdmEntityWizardPage<DerivedUnitFacade> {
- /**
- * @param formFactory
- * @param conversation
- * @param entity
- */
public GatheringEventWizardPage(CdmFormFactory formFactory,
ConversationHolder conversation, DerivedUnitFacade entity) {
super(formFactory, conversation, entity);
setPageComplete(true);
}
- /* (non-Javadoc)
- * @see eu.etaxonomy.taxeditor.ui.forms.AbstractCdmEntityWizardPage#checkComplete()
- */
@Override
protected void checkComplete() {
setPageComplete(true);
}
- /* (non-Javadoc)
- * @see eu.etaxonomy.taxeditor.forms.AbstractCdmEntityWizardPage#createElement(eu.etaxonomy.taxeditor.forms.ICdmFormElement)
- */
@Override
public AbstractCdmDetailElement<DerivedUnitFacade> createElement(ICdmFormElement rootElement) {
GatheringEventDetailElement detailElement = formFactory.createGatheringEventDetailElement(rootElement);
--- /dev/null
+// $Id$
+/**
+* Copyright (C) 2007 EDIT
+* European Distributed Institute of Taxonomy
+* http://www.e-taxonomy.eu
+*
+* The contents of this file are subject to the Mozilla Public License Version 1.1
+* See LICENSE.TXT at the top of this package for the full license terms.
+*/
+
+package eu.etaxonomy.taxeditor.ui.section.occurrence;
+
+import java.util.Collection;
+
+import eu.etaxonomy.cdm.api.conversation.ConversationHolder;
+import eu.etaxonomy.cdm.model.description.PolytomousKey;
+import eu.etaxonomy.cdm.model.location.NamedArea;
+import eu.etaxonomy.taxeditor.ui.dialog.selection.NamedAreaSelectionDialog;
+import eu.etaxonomy.taxeditor.ui.element.CdmFormFactory;
+import eu.etaxonomy.taxeditor.ui.element.ICdmFormElement;
+import eu.etaxonomy.taxeditor.ui.section.AbstractEntityCollectionSection;
+
+/**
+ *
+ * @author pplitzner
+ * @date Sep 21, 2015
+ *
+ */
+public class GeoScopePolyKeyDetailSection extends AbstractEntityCollectionSection<PolytomousKey, NamedArea> {
+
+ public GeoScopePolyKeyDetailSection(CdmFormFactory formFactory,
+ ConversationHolder conversation, ICdmFormElement parentElement, int style) {
+ super(formFactory, conversation, parentElement, "Geo Scopes", style);
+ }
+
+ /** {@inheritDoc} */
+ @Override
+ public Collection<NamedArea> getCollection(PolytomousKey entity) {
+ return entity.getGeographicalScope();
+ }
+
+ /** {@inheritDoc} */
+ @Override
+ public NamedArea createNewElement() {
+ NamedArea selection = NamedAreaSelectionDialog.select(getLayoutComposite().getShell(), getConversationHolder(), null);
+
+ return selection;
+ }
+
+ /** {@inheritDoc} */
+ @Override
+ public void addElement(NamedArea element) {
+ getEntity().addGeographicalScope(element);
+ }
+
+ /** {@inheritDoc} */
+ @Override
+ public void removeElement(NamedArea element) {
+ getEntity().removeGeographicalScope(element);
+ }
+
+ /** {@inheritDoc} */
+ @Override
+ public String getEmptyString() {
+ return "No geo scopes yet.";
+ }
+
+ /** {@inheritDoc} */
+ @Override
+ protected String getTooltipString() {
+ return "Add a geo scope";
+ }
+
+}
import eu.etaxonomy.cdm.api.service.IOccurrenceService;
import eu.etaxonomy.cdm.hibernate.HibernateProxyHelper;
import eu.etaxonomy.cdm.model.common.CdmBase;
-import eu.etaxonomy.cdm.model.description.IndividualsAssociation;
-import eu.etaxonomy.cdm.model.description.TaxonDescription;
import eu.etaxonomy.cdm.model.name.SpecimenTypeDesignation;
import eu.etaxonomy.cdm.model.name.TaxonNameBase;
import eu.etaxonomy.cdm.model.taxon.TaxonBase;
associationsViewer = new TableViewer(getLayoutComposite(), SWT.FULL_SELECTION);
associationsViewer.getTable().setLayoutData(LayoutConstants.FILL_HORIZONTALLY(2, 1));
associationsViewer.setContentProvider(new ArrayContentProvider());
- Collection<IndividualsAssociation> individualsAssociations = CdmStore.getService(IOccurrenceService.class).listIndividualsAssociations(entity.innerDerivedUnit(), null, null, null, null);
- //TODO implement service method for this which is just used in the label provider
- Collection<TaxonBase<?>> associatedTaxa = new HashSet<TaxonBase<?>>();
- for (IndividualsAssociation individualsAssociation : individualsAssociations) {
- if(individualsAssociation.getInDescription().isInstanceOf(TaxonDescription.class)){
- TaxonDescription taxonDescription = HibernateProxyHelper.deproxy(individualsAssociation.getInDescription(), TaxonDescription.class);
- associatedTaxa.add(taxonDescription.getTaxon());
- }
- }
+ Collection<TaxonBase<?>> associatedTaxa = CdmStore.getService(IOccurrenceService.class).listAssociatedTaxa(entity.innerDerivedUnit(), null, null, null, null);
associationsViewer.setInput(associatedTaxa);
associationsViewer.addDoubleClickListener(this);
getEntity().setGeneticAccessionNumber(textGeneticAccessNo.getText());
if(textGeneticAccessNo.getText()!=null && !textGeneticAccessNo.getText().isEmpty()){
try {
- textNCBIUri.setUri(getEntity().getGenBankUri());
- textENAUri.setUri(getEntity().getEmblUri());
- textDDBJUri.setUri(getEntity().getDdbjUri());
+ textNCBIUri.setParsedText(getEntity().getGenBankUri());
+ textENAUri.setParsedText(getEntity().getEmblUri());
+ textDDBJUri.setParsedText(getEntity().getDdbjUri());
} catch (URISyntaxException e) {
textGeneticAccessNo.setBackground(getColor(Resources.COLOR_PARSE_ERROR));
}
getEntity().setBoldProcessId(textBoldProcessID.getText());
if(textBoldProcessID.getText()!=null && !textBoldProcessID.getText().isEmpty()){
try {
- textBoldUri.setUri(getEntity().getBoldUri());
+ textBoldUri.setParsedText(getEntity().getBoldUri());
} catch (URISyntaxException e) {
textBoldProcessID.setBackground(getColor(Resources.COLOR_PARSE_ERROR));
}
getEntity().setAbbrevTitle(text_abbrevTitle.getText());
toggleableAbbrevCache.setText(text_abbrevTitle.getText());
} else if (eventSource == text_uri) {
- getEntity().setUri(text_uri.getUri());
+ getEntity().setUri(text_uri.parseText());
} else if (eventSource == text_volume) {
getEntity().setVolume(text_volume.getText());
}
.createEnumComboElement(OriginalSourceType.class,
formElement, style);
super.createControls(formElement, style);
- text_idInSource = formFactory.createTextWithLabelElement(formElement, "Id In Source", null, style);
+ text_idInSource = formFactory.createTextWithLabelElement(formElement, "ID in Source", null, style);
text_idNamespace = formFactory.createTextWithLabelElement(formElement, "ID Namespace", null, style);
text_originaleNameString = formFactory.createTextWithLabelElement(
formElement, "Original Name", null, SWT.NULL);
} else if (eventSource == text_description) {\r
getEntity().getRepresentation(Language.getDefaultLanguage()).setText(text_description.getText());\r
} else if (eventSource == uri_uri) {\r
- getEntity().setUri(uri_uri.getUri());\r
+ getEntity().setUri(uri_uri.parseText());\r
} else if (eventSource == text_abbreviatedLabel) {\r
getEntity().getRepresentation(Language.getDefaultLanguage()).setAbbreviatedLabel(text_abbreviatedLabel.getText());\r
} else if (eventSource == timePeriod_validPeriod) {\r
handleRepresentation(eventSource);\r
\r
if (eventSource == uri_uri) {\r
- getEntity().setUri(uri_uri.getUri());\r
+ getEntity().setUri(uri_uri.parseText());\r
} else if (eventSource == uri_uriTermSource) {\r
- getEntity().setTermSourceUri(uri_uriTermSource.getUri());\r
+ getEntity().setTermSourceUri(uri_uriTermSource.parseText());\r
}\r
}\r
\r
@Override
public void widgetSelected(SelectionEvent e) {
- T selection = SelectionDialogFactory.getSelectionFromDialog(clazz, getShell(), getConversationHolder(), getEntity());
+ T selection = SelectionDialogFactory.getSelectionFromDialog(clazz, getShell(), getConversationHolder(), getEntity(), getParentElement());
setSelectionInternal(selection);
}
/** {@inheritDoc} */
@Override
public void setEnabled(boolean enabled) {
+
button_selection.setEnabled(enabled);
+ if (isDeletable){
+ button_remove.setEnabled(enabled);
+ }
if (isEditable) {
updateButtonStates();
}
+
}
/* (non-Javadoc)
* See LICENSE.TXT at the top of this package for the full license terms.
*/
-package eu.etaxonomy.taxeditor;
+package eu.etaxonomy.taxeditor.util;
import org.eclipse.core.runtime.Platform;
import org.osgi.framework.Bundle;
/**
* Prefix to declare the version as beta
*/
- private static final String BETA_PREFIX = "[Beta]";
+ private static final String BETA_PREFIX = "[REMOTING]";
+ public static String getTitle() {
+ return "EDIT Taxonomic Editor " + ApplicationUtil.getVersion();
+ }
/**
* @return
*/
public static boolean isStable() {
return !getVersion().startsWith("[");
}
- /**
- * <p>getPluginId</p>
- *
- * @return a {@link java.lang.String} object.
- */
- public static String getPluginId(){
- return TaxonomicEditorPlugin.PLUGIN_ID;
- }
-
}
--- /dev/null
+// $Id$
+/**
+* Copyright (C) 2015 EDIT
+* European Distributed Institute of Taxonomy
+* http://www.e-taxonomy.eu
+*
+* The contents of this file are subject to the Mozilla Public License Version 1.1
+* See LICENSE.TXT at the top of this package for the full license terms.
+*/
+package eu.etaxonomy.taxeditor.util;
+
+import java.util.ArrayList;
+import java.util.List;
+import java.util.UUID;
+
+import eu.etaxonomy.cdm.model.common.CdmBase;
+
+/**
+ * @author cmathew
+ * @date 29 Jun 2015
+ *
+ */
+public class OperationsUtil {
+
+ public static List<UUID> convertToUuidList(List<CdmBase> cdmBaseList) {
+ List<UUID> uuids = new ArrayList<UUID>();
+ for(CdmBase cdmBase : cdmBaseList) {
+ if(cdmBase == null) {
+ uuids.add(null);
+ } else {
+ uuids.add(cdmBase.getUuid());
+ }
+ }
+ return uuids;
+ }
+}
// $Id$
/**
-* Copyright (C) 2007 EDIT
-* European Distributed Institute of Taxonomy
-* http://www.e-taxonomy.eu
-*
-* The contents of this file are subject to the Mozilla Public License Version 1.1
-* See LICENSE.TXT at the top of this package for the full license terms.
-*/
+ * Copyright (C) 2007 EDIT
+ * European Distributed Institute of Taxonomy
+ * http://www.e-taxonomy.eu
+ *
+ * The contents of this file are subject to the Mozilla Public License Version 1.1
+ * See LICENSE.TXT at the top of this package for the full license terms.
+ */
package eu.etaxonomy.taxeditor.view;
+import java.util.Arrays;
+import java.util.List;
+import java.util.Map;
+
import org.eclipse.jface.viewers.ISelection;
import org.eclipse.jface.viewers.IStructuredSelection;
import org.eclipse.jface.viewers.StructuredSelection;
import eu.etaxonomy.taxeditor.model.AbstractUtility;
import eu.etaxonomy.taxeditor.model.IDirtyMarkable;
import eu.etaxonomy.taxeditor.operation.IPostOperationEnabled;
+import eu.etaxonomy.taxeditor.session.ICdmEntitySession;
+import eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled;
/**
* <p>Abstract AbstractCdmViewPart class.</p>
* @created Jun 15, 2010
* @version 1.0
*/
-public abstract class AbstractCdmViewPart extends ViewPart implements ISelectionListener, IPostOperationEnabled, IConversationEnabled, IDirtyMarkable{
+public abstract class AbstractCdmViewPart extends ViewPart implements ISelectionListener, IPostOperationEnabled, IConversationEnabled, ICdmEntitySessionEnabled, IDirtyMarkable{
- protected ISelectionService selectionService;
+ protected ISelectionService selectionService;
- public static IStructuredSelection EMPTY_SELECTION = new StructuredSelection();
+ public static IStructuredSelection EMPTY_SELECTION = new StructuredSelection();
- protected IWorkbenchPart part;
+ protected IWorkbenchPart part;
private PageBook pageBook;
- private Label emptySelectionLabel;
+ private Label emptySelectionLabel;
- private Composite viewerComposite;
+ private Composite viewerComposite;
- /** {@inheritDoc} */
- @Override
- public void createPartControl(Composite parent) {
- selectionService = getSite().getWorkbenchWindow().getSelectionService();
- selectionService.addSelectionListener(this);
+ /** {@inheritDoc} */
+ @Override
+ public void createPartControl(Composite parent) {
+ selectionService = getSite().getWorkbenchWindow().getSelectionService();
+ selectionService.addSelectionListener(this);
- pageBook = new PageBook(parent, SWT.NULL);
- //create viewerComposite
- viewerComposite = new SashForm(pageBook, SWT.HORIZONTAL);
- createViewer(viewerComposite);
+ pageBook = new PageBook(parent, SWT.NULL);
+ //create viewerComposite
+ viewerComposite = new SashForm(pageBook, SWT.HORIZONTAL);
+ createViewer(viewerComposite);
- // Page 2: Nothing selected
+ // Page 2: Nothing selected
emptySelectionLabel = new Label(pageBook, SWT.TOP + SWT.LEFT + SWT.WRAP);
setInitialSelection();
- }
-
- /**
- *
- */
- private void setInitialSelection() {
- selectionChanged(AbstractUtility.getActivePart(), getInitialSelection());
- }
-
- /**
-
* <p>getInitialSelection</p>
- *
- * @return a {@link org.eclipse.jface.viewers.ISelection} object.
- */
- protected ISelection getInitialSelection() {
- return selectionService.getSelection();
- }
-
- /**
- */
- public void showEmptyPage(){
- pageBook.showPage(emptySelectionLabel);
- }
+ }
+
+ /**
+ *
+ */
+ private void setInitialSelection() {
+ selectionChanged(AbstractUtility.getActivePart(), getInitialSelection());
+ }
+
+ /**
+ * <p>getInitialSelection</p>
+ *
+ * @return a {@link org.eclipse.jface.viewers.ISelection} object.
+ */
+ protected ISelection getInitialSelection() {
+ return selectionService.getSelection();
+ }
+
+ /**
+ * <p>showEmptyPage</p>
+ */
+ public void showEmptyPage(){
+ pageBook.showPage(emptySelectionLabel);
+ }
/**
* <p>showViewer</p>
* @param selection a {@link org.eclipse.jface.viewers.ISelection} object.
*/
public void showViewer(IWorkbenchPart part, IStructuredSelection selection){
- this.part = part;
+ this.part = part;
- Object element = selection.getFirstElement();
+ Object element = selection.getFirstElement();
- getViewer().setInput(element);
+ getViewer().setInput(element);
- showViewer();
+ showViewer();
}
/**
*/
public abstract Viewer getViewer();
- /**
- * <p>showViewer</p>
- */
- public void showViewer(){
- pageBook.showPage(viewerComposite);
- }
-
- public void setEnabled(boolean enabled){
- pageBook.setEnabled(enabled);
- }
-
- /** {@inheritDoc} */
- @Override
- public void setFocus() {
- if(getConversationHolder() != null){
- getConversationHolder().bind();
- }
- getViewer().getControl().setFocus();
- }
-
- /**
- * <p>createViewer</p>
- *
- * @param parent a {@link org.eclipse.swt.widgets.Composite} object.
- */
- public abstract void createViewer(Composite parent);
-
- /** {@inheritDoc} */
- @Override
+ /**
+ * <p>showViewer</p>
+ */
+ public void showViewer(){
+ pageBook.showPage(viewerComposite);
+ }
+
+ public void setEnabled(boolean enabled){
+ pageBook.setEnabled(enabled);
+ }
+
+ /** {@inheritDoc} */
+ @Override
+ public void setFocus() {
+ if(getConversationHolder() != null){
+ getConversationHolder().bind();
+ }
+ if(getCdmEntitySession() != null){
+ getCdmEntitySession().bind();
+ }
+ getViewer().getControl().setFocus();
+ }
+
+ /**
+ * <p>createViewer</p>
+ *
+ * @param parent a {@link org.eclipse.swt.widgets.Composite} object.
+ */
+ public abstract void createViewer(Composite parent);
+
+ /** {@inheritDoc} */
+ @Override
public boolean postOperation(CdmBase objectAffectedByOperation) {
- changed(objectAffectedByOperation);
- return true;
- }
+ changed(objectAffectedByOperation);
+ return true;
+ }
- /** {@inheritDoc} */
- @Override
+ /** {@inheritDoc} */
+ @Override
public abstract void changed(Object object);
- /**
-
* <p>getConversationHolder</p>
- *
- * @return a {@link eu.etaxonomy.cdm.api.conversation.ConversationHolder} object.
- */
- @Override
+ /**
+ * <p>getConversationHolder</p>
+ *
+ * @return a {@link eu.etaxonomy.cdm.api.conversation.ConversationHolder} object.
+ */
+ @Override
public ConversationHolder getConversationHolder() {
- if(part != null && part instanceof IConversationEnabled) {
+ if(part != null && part instanceof IConversationEnabled) {
return ((IConversationEnabled) part).getConversationHolder();
}
- return null;
- }
+ return null;
+ }
+
+ @Override
+ public ICdmEntitySession getCdmEntitySession() {
+ if(part != null && part instanceof ICdmEntitySessionEnabled) {
+ return ((ICdmEntitySessionEnabled) part).getCdmEntitySession();
+ }
+ return null;
+ }
+
+ @Override
+ public List<CdmBase> getRootEntities() {
+ return Arrays.asList((CdmBase)getViewer().getInput());
+ }
- /** {@inheritDoc} */
- @Override
+ /** {@inheritDoc} */
+ @Override
public void update(CdmDataChangeMap changeEvents) {
- }
-
- /** {@inheritDoc} */
- @Override
- public void dispose() {
- selectionService.removeSelectionListener(this);
- super.dispose();
- }
-
- /* (non-Javadoc)
- * @see eu.etaxonomy.taxeditor.model.IDirtyMarkableSelectionProvider#forceDirty()
- */
- @Override
- public void forceDirty() {
- changed(null);
- }
+ }
+
+ /** {@inheritDoc} */
+ @Override
+ public void dispose() {
+ selectionService.removeSelectionListener(this);
+ super.dispose();
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.model.IDirtyMarkableSelectionProvider#forceDirty()
+ */
+ @Override
+ public void forceDirty() {
+ changed(null);
+ }
+
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled#getPropertyPathsMap()
+ */
+ @Override
+ public Map<Object, List<String>> getPropertyPathsMap() {
+ // TODO Auto-generated method stub
+ return null;
+ }
}
// $Id$
/**
* Copyright (C) 2007 EDIT
-* European Distributed Institute of Taxonomy
+* European Distributed Institute of Taxonomy
* http://www.e-taxonomy.eu
-*
+*
* The contents of this file are subject to the Mozilla Public License Version 1.1
* See LICENSE.TXT at the top of this package for the full license terms.
*/
import org.eclipse.jface.viewers.IStructuredSelection;
import org.eclipse.ui.handlers.HandlerUtil;
+import eu.etaxonomy.taxeditor.Messages;
import eu.etaxonomy.taxeditor.datasource.CdmDataSourceRepository;
import eu.etaxonomy.taxeditor.model.MessagingUtils;
import eu.etaxonomy.taxeditor.store.CdmStore;
import eu.etaxonomy.taxeditor.view.datasource.CdmMetaDataAwareDataSourceContainer;
/**
- * <p>ChangeConnectionHandler class.</p>
- *
* @author n.hoffmann
* @created 15.04.2009
* @version 1.0
*/
public class ChangeConnectionHandler extends AbstractHandler {
- /* (non-Javadoc)
- * @see eu.etaxonomy.taxeditor.store.datasource.handler.AbstractDataSourceHandler#specificExecute(org.eclipse.core.commands.ExecutionEvent)
- */
/** {@inheritDoc} */
- public Object execute(ExecutionEvent event) {
+ @Override
+ public Object execute(ExecutionEvent event) {
ISelection selection = HandlerUtil.getCurrentSelection(event);
-
+
if(selection != null && selection instanceof IStructuredSelection){
CdmMetaDataAwareDataSourceContainer container = (CdmMetaDataAwareDataSourceContainer) ((IStructuredSelection) selection).getFirstElement();
-
+
if(CdmStore.isConnecting()){
- MessagingUtils.warningDialog("Already connecting", this, "You are currently connecting to a different datasource already.");
+ MessagingUtils.warningDialog(Messages.ChangeConnectionHandler_ALREADY_CONNECTING, this, Messages.ChangeConnectionHandler_CURRENTLY_CONNECTING_ALREADY);
return null;
}
-
+
try {
container.getCdmSource().checkConnection();
- boolean confirmed = MessagingUtils.confirmDialog("Confirm Datasource Connection", "Do you really want to connect to this datasource?\n\n"
+ boolean confirmed = MessagingUtils.confirmDialog(Messages.ChangeConnectionHandler_CONFIRM_DATASOURCE, Messages.ChangeConnectionHandler_REALLY_WANT_TO_CONNECT
+ container.getCdmSource().getName());
-
+
if(confirmed){
CdmDataSourceRepository.changeDataSource(container.getCdmSource());
}
} catch (Exception e) {
- MessagingUtils.warningDialog("Chosen datasource is not available", this, "This could mean that either the database server is " +
- "not running or the machine is not reachable.\n\n" +
- "Please also make sure that you are connected to the network when trying to connect to a remote datasource.");
+ MessagingUtils.warningDialog(Messages.ChangeConnectionHandler_DATASOURCE_NOT_AVAILABLE, this, Messages.ChangeConnectionHandler_NOT_AVAILABLE_REASONS);
MessagingUtils.warn(getClass(), e);
return null;
- }
+ }
}
-
+
return null;
}
}
// $Id$
/**
* Copyright (C) 2007 EDIT
-* European Distributed Institute of Taxonomy
+* European Distributed Institute of Taxonomy
* http://www.e-taxonomy.eu
-*
+*
* The contents of this file are subject to the Mozilla Public License Version 1.1
* See LICENSE.TXT at the top of this package for the full license terms.
*/
import eu.etaxonomy.taxeditor.view.datasource.CdmMetaDataAwareDataSourceContainer;
/**
- * <p>DeleteDataSourceHandler class.</p>
- *
* @author n.hoffmann
* @created 15.04.2009
* @version 1.0
*/
public class DeleteDataSourceHandler extends AbstractDataSourceHandler {
- /* (non-Javadoc)
- * @see eu.etaxonomy.taxeditor.store.datasource.handler.AbstractDataSourceHandler#specificExecute(org.eclipse.core.commands.ExecutionEvent)
- */
/** {@inheritDoc} */
@Override
public boolean specificExecute(ExecutionEvent event) {
ISelection selection = HandlerUtil.getActivePart(event).getSite().getSelectionProvider().getSelection();
if(selection instanceof IStructuredSelection){
Object[] selectedObjects = ((IStructuredSelection) selection).toArray();
-
+
if(! MessageDialog.openConfirm(HandlerUtil.getActiveShell(event), "Confirm Deletion", "Do you want to delete the selected datasources?")){
return false;
}
- // Delete from persistent data sources
+ // Delete from persistent data sources
for(Object object : selectedObjects){
CdmPersistentDataSource dataSource = (CdmPersistentDataSource) ((CdmMetaDataAwareDataSourceContainer) object).getCdmSource();
CdmDataSourceRepository.delete(dataSource);
}
-
+
return true;
}
return false;
import java.util.LinkedHashSet;
import java.util.List;
import java.util.Set;
-import java.util.UUID;
import org.eclipse.jface.viewers.ITreeContentProvider;
import org.eclipse.jface.viewers.TreeNode;
import org.eclipse.jface.viewers.Viewer;
-import eu.etaxonomy.cdm.api.service.IOccurrenceService;
import eu.etaxonomy.cdm.model.molecular.DnaSample;
import eu.etaxonomy.cdm.model.molecular.Sequence;
import eu.etaxonomy.cdm.model.molecular.SingleRead;
import eu.etaxonomy.cdm.model.occurrence.DerivedUnit;
import eu.etaxonomy.cdm.model.occurrence.SpecimenOrObservationBase;
import eu.etaxonomy.cdm.model.occurrence.SpecimenOrObservationType;
-import eu.etaxonomy.taxeditor.store.CdmStore;
public class DerivateContentProvider implements ITreeContentProvider {
+ List<TreeNode> rootNodes;
+
@Override
public void dispose() {
// TODO Auto-generated method stub
}
+ public List<SpecimenOrObservationBase> getRootElements() {
+ List<SpecimenOrObservationBase> elements = new ArrayList<SpecimenOrObservationBase>();
+
+ if(rootNodes != null) {
+ for(TreeNode node : rootNodes) {
+ elements.add((SpecimenOrObservationBase)node.getValue());
+ }
+ }
+ return elements;
+ }
+
@Override
public void inputChanged(Viewer viewer, Object oldInput, Object newInput) {
}
@Override
public Object[] getElements(Object inputElement) {
- List<TreeNode> rootElements = new ArrayList<TreeNode>();
+ rootNodes = new ArrayList<TreeNode>();
if(inputElement instanceof Set){
for (Object o: (Set)inputElement) {
- if(o instanceof UUID){
- UUID uuid = (UUID)o;
- SpecimenOrObservationBase<?> rootElement = CdmStore.getService(IOccurrenceService.class).load(uuid);
+ if(o instanceof SpecimenOrObservationBase){
+ SpecimenOrObservationBase<?> rootElement = (SpecimenOrObservationBase<?>)o;
if(rootElement!=null){
- rootElements.add(new TreeNode(rootElement));
+ rootNodes.add(new TreeNode(rootElement));
}
}
}
}
- return rootElements.toArray();
+ return rootNodes.toArray();
}
@Override
node.setParent(currentnode);
children.add(node);
}
- return children.toArray();
}
else if(value instanceof Sequence){
Set<SingleRead> singleReads = ((Sequence) value).getSingleReads();
}
return children.toArray();
}
- else if(value instanceof SpecimenOrObservationBase){
+
+ if(value instanceof SpecimenOrObservationBase){
List<DerivedUnit> derivates = getDerivates((SpecimenOrObservationBase<?>) value);
for (DerivedUnit derivedUnit:derivates) {
TreeNode node = new TreeNode(derivedUnit);
else if(element instanceof Sequence){
return !((Sequence)element).getSingleReads().isEmpty();
}
- else if(element instanceof SpecimenOrObservationBase){
+
+ if(element instanceof SpecimenOrObservationBase){
SpecimenOrObservationBase<?> specimenOrObservation = (SpecimenOrObservationBase<?>)element;
for(DerivationEvent event:specimenOrObservation.getDerivationEvents()){
if(!event.getDerivatives().isEmpty()){
import org.hibernate.LazyInitializationException;
import eu.etaxonomy.cdm.api.conversation.ConversationHolder;
-import eu.etaxonomy.cdm.api.service.IOccurrenceService;
import eu.etaxonomy.cdm.hibernate.HibernateProxyHelper;
import eu.etaxonomy.cdm.model.common.CdmBase;
import eu.etaxonomy.cdm.model.common.DefinedTerm;
FieldUnit fieldUnit = (FieldUnit)derivate;
if(fieldUnit.getGatheringEvent()!=null){
GatheringEvent gatheringEvent = fieldUnit.getGatheringEvent();
- if(CdmStore.getService(IOccurrenceService.class).exists(fieldUnit.getUuid()) && !conversation.getSession().contains(gatheringEvent)){
- fieldUnit = (FieldUnit) CdmStore.getService(IOccurrenceService.class).load(fieldUnit.getUuid());
- gatheringEvent = fieldUnit.getGatheringEvent();
- }
label += gatheringEvent.getCountry()!=null?gatheringEvent.getCountry().getLabel()+separator:emptyString;
label += gatheringEvent.getLocality()!=null?gatheringEvent.getLocality().getText()+separator:emptyString;
label += gatheringEvent.getGatheringDate()!=null?gatheringEvent.getGatheringDate()+separator:emptyString;
else if(derivate instanceof DerivedUnit){
DerivedUnit derivedUnit = (DerivedUnit)derivate;
if(derivedUnit.getRecordBasis()==SpecimenOrObservationType.PreservedSpecimen){
- java.util.Collection<FieldUnit> fieldUnits = CdmStore.getService(IOccurrenceService.class).getFieldUnits(derivedUnit.getUuid());
- if(fieldUnits!=null && !fieldUnits.isEmpty()){
- FieldUnit fieldUnit = fieldUnits.iterator().next();
- GatheringEvent gatheringEvent = fieldUnit.getGatheringEvent();
-// gatheringEvent = HibernateProxyHelper.deproxy(gatheringEvent, GatheringEvent.class);
- if(gatheringEvent!=null){
- label += gatheringEvent.getCollector()!=null?gatheringEvent.getCollector()+separator:emptyString;
+ //java.util.Collection<FieldUnit> fieldUnits = CdmStore.getService(IOccurrenceService.class).getFieldUnits(derivedUnit.getUuid());
+ //TODO : This is not generic anymore for performance reasons
+ Set<SpecimenOrObservationBase> originals = derivedUnit.getOriginals();
+ if(originals!=null && originals.size() ==1) {
+ SpecimenOrObservationBase specimen = originals.iterator().next();
+ if(specimen instanceof FieldUnit) {
+ FieldUnit fieldUnit = (FieldUnit)specimen;
+ GatheringEvent gatheringEvent = fieldUnit.getGatheringEvent();
+ if(gatheringEvent!=null){
+ label += gatheringEvent.getCollector()!=null?gatheringEvent.getCollector()+separator:emptyString;
+ }
+ label += fieldUnit.getFieldNumber()!=null?fieldUnit.getFieldNumber()+separator:emptyString;
}
- label += fieldUnit.getFieldNumber()!=null?fieldUnit.getFieldNumber()+separator:emptyString;
}
+
eu.etaxonomy.cdm.model.occurrence.Collection collection = derivedUnit.getCollection();
if(collection!=null){
label += collection.getCode()!=null?"("+collection.getCode()+")"+separator:emptyString;
}
- String mostSignificantIdentifier = CdmStore.getService(IOccurrenceService.class).getMostSignificantIdentifier(derivedUnit);
+ String mostSignificantIdentifier = derivedUnit.getMostSignificantIdentifier();
label += mostSignificantIdentifier!=null?mostSignificantIdentifier+separator:emptyString;
}
else if(derivedUnit.getRecordBasis()==SpecimenOrObservationType.TissueSample){
boolean hasCharacterData = false;
if(cdmBase.isInstanceOf(SpecimenOrObservationBase.class)){
SpecimenOrObservationBase<?> specimen = HibernateProxyHelper.deproxy(cdmBase, SpecimenOrObservationBase.class);
- if(!CdmStore.getService(IOccurrenceService.class).getCharacterDataForSpecimen(specimen).isEmpty()){
+ if(specimen.hasCharacterData()){
hasCharacterData = true;
}
}
}
SearchManager searchManager = new SearchManager();
- List<SpecimenOrObservationBase> occurrences = searchManager.findOccurrences(config);
+ List<SpecimenOrObservationBase> occurrences = searchManager.findOccurrences(config, true);
//filter out specimens of wrong type (only if an associated taxon was selected)
if(selectedTaxon!=null && !specimenType.equals(SpecimenOrObservationType.Unknown)){
*/
package eu.etaxonomy.taxeditor.view.derivateSearch;
+import java.util.Collection;
+import java.util.List;
+import java.util.Map;
+
import org.eclipse.core.runtime.IProgressMonitor;
import org.eclipse.jface.action.MenuManager;
import org.eclipse.swt.widgets.Composite;
import org.eclipse.ui.part.ViewPart;
import eu.etaxonomy.cdm.api.conversation.ConversationHolder;
+import eu.etaxonomy.cdm.model.common.CdmBase;
import eu.etaxonomy.cdm.model.occurrence.SpecimenOrObservationBase;
import eu.etaxonomy.taxeditor.model.IContextListener;
+import eu.etaxonomy.taxeditor.session.ICdmEntitySession;
+import eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled;
import eu.etaxonomy.taxeditor.store.CdmStore;
/**
* This view allows to search for and filter {@link SpecimenOrObservationBase}s and display
* the results in a list. The results can be selected and opened in an editor.
*/
-public class DerivateSearchView extends ViewPart implements IContextListener {
+public class DerivateSearchView extends ViewPart implements IContextListener, ICdmEntitySessionEnabled {
public static final String ID = "eu.etaxonomy.taxeditor.view.derivateSearch.DerivateSearchView";
private DerivateSearchCompositeController derivateSearchCompositeController;
private ConversationHolder conversationHolder;
+ private ICdmEntitySession cdmEntitySession;
/**
* Constructs a new DerivateSearchView and registers it to listen to context changes
@Override
public void createPartControl(Composite parent) {
+
derivateSearchCompositeController = new DerivateSearchCompositeController(parent, this);
getSite().setSelectionProvider(derivateSearchCompositeController.getResultViewer());
derivateSearchCompositeController.setEnabled(CdmStore.isActive());
if(getConversationHolder()!=null && !getConversationHolder().isClosed() && !getConversationHolder().isBound()){
getConversationHolder().bind();
}
+ if(getCdmEntitySession() != null) {
+ getCdmEntitySession().bind();
+ }
}
@Override
@Override
public void contextRefresh(IProgressMonitor monitor) {
initConversation();
+ initSession();
+ }
+
+ private void initSession() {
+ if(CdmStore.isActive()) {
+ cdmEntitySession = CdmStore.getCurrentSessionManager().newSession(this, true);
+ }
}
private void initConversation(){
return conversationHolder;
}
- /**
- * {@inheritDoc}
- */
+
@Override
public void dispose() {
if(conversationHolder!=null){
conversationHolder.close();
}
+
+ if(cdmEntitySession != null) {
+ cdmEntitySession.dispose();
+ }
+ super.dispose();
+ }
+
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled#getCdmEntitySession()
+ */
+ @Override
+ public ICdmEntitySession getCdmEntitySession() {
+ initSession();
+ return cdmEntitySession;
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled#getRootEntities()
+ */
+ @Override
+ public <T extends CdmBase> Collection<T> getRootEntities() {
+ // TODO Auto-generated method stub
+ return null;
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled#getPropertyPathsMap()
+ */
+ @Override
+ public Map<Object, List<String>> getPropertyPathsMap() {
+ // TODO Auto-generated method stub
+ return null;
}
}
import eu.etaxonomy.taxeditor.ui.section.identifier.IdentifierDetailSection;
import eu.etaxonomy.taxeditor.ui.section.key.PolytomousKeyDetailSection;
import eu.etaxonomy.taxeditor.ui.section.key.PolytomousKeyNodeDetailSection;
-import eu.etaxonomy.taxeditor.ui.section.key.TaxonomicScopeSection;
import eu.etaxonomy.taxeditor.ui.section.name.NameRelationshipDetailSection;
import eu.etaxonomy.taxeditor.ui.section.name.NomenclaturalStatusSection;
import eu.etaxonomy.taxeditor.ui.section.name.NonViralNameDetailSection;
private ISelection selection;
- /**
- * <p>
- * Constructor for DetailsViewer.
- * </p>
- *
- * @param parent
- * a {@link org.eclipse.swt.widgets.Composite} object.
- * @param viewPart
- * a {@link eu.etaxonomy.taxeditor.view.AbstractCdmViewPart}
- * object.
- */
public DetailsViewer(Composite parent, AbstractCdmViewPart viewPart) {
super(parent, viewPart);
}
}
- /**
- * @param rootElement
- */
private void createEmptySection(RootElement parent) {
destroySections();
addPart(emptySection);
}
- /**
- * @param rootElement
- */
private void createGroupSection(RootElement parent) {
destroySections();
addPart(grantedAuthorityDetailSection);
}
- /*
- * (non-Javadoc)
- *
- * @see org.eclipse.jface.viewers.Viewer#getSelection()
- */
/** {@inheritDoc} */
@Override
public ISelection getSelection() {
}
}
- /**
- * createTaxonSections(RootElement parent)
- *
- * @param parent
- */
private void createTaxonSections(RootElement parent) {
destroySections();
addPart(nameRelationshipSection);
}
-
addPart(parsingMessagesSection);
addPart(taxonBaseDetailSection);
addPart(nonViralNameSection);
addPart(referenceDetailSection);
}
- /**
- * createNameSections
- *
- * @param parent
- */
private void createNameSections(RootElement parent) {
destroySections();
NonViralNameDetailSection nonViralNameSection = formFactory.createNonViralNameDetailSection(getConversationHolder(), parent, this,
}
}
- /**
- * createReferenceSections
- *
- * @param parent
- */
private void createReferenceSections(RootElement parent) {
destroySections();
addPart(referenceDetailSection);
}
- /**
- * createTeamOrPersonBaseDetailSection
- *
- * @param parent
- */
private void createTeamOrPersonBaseDetailSection(RootElement parent) {
destroySections();
TeamOrPersonBaseDetailSection teamOrPersonBaseDetailSection = formFactory.createTeamOrPersonBaseDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
addPart(teamOrPersonBaseDetailSection);
}
- /**
- * createTeamDetailSection
- *
- * @param parent
- */
private void createTeamDetailSection(RootElement parent) {
destroySections();
TeamDetailSection teamDetailSection = formFactory.createTeamDetailSection(getConversationHolder(), parent, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
addPart(teamDetailSection);
}
- /**
- * createPersonDetailSection
- *
- * @param parent
- */
private void createPersonDetailSection(RootElement parent) {
destroySections();
PersonDetailSection personDetailSection = formFactory.createPersonDetailSection(getConversationHolder(), parent, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
addPart(personDetailSection);
}
- /**
- * createDescriptionElementSection
- *
- * @param parent
- */
private void createDescriptionElementSection(RootElement parent) {
destroySections();
addPart(descriptionElementMediaSection);
}
- /**
- * createDescriptionSection
- *
- * @param parent
- */
private void createDescriptionSection(RootElement parent) {
destroySections();
DescriptionDetailSection descriptionDetailSection = formFactory.createDescriptionDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
addPart(scopeSection);
}
- /**
- * createDescriptionSection
- *
- * @param parent
- */
private void createSpecimenDescriptionSection(RootElement parent) {
destroySections();
DescriptionDetailSection descriptionDetailSection = formFactory.createDescriptionDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
addPart(descriptionDetailSection);
}
- /**
- * Creates the use Description section
- *
- * @param parent
- */
private void createUseDescriptionSection(RootElement parent) {
destroySections();
DescriptionDetailSection descriptionDetailSection = formFactory.createDescriptionDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
}
-
- /**
- * @param rootElement
- */
private void createImageGallerySection(RootElement parent) {
destroySections();
DescriptionDetailSection descriptionDetailSection = formFactory.createDescriptionDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
addPart(descriptionDetailSection);
}
- /**
- * createMediaElementSection
- *
- * @param parent
- */
-
private void createMediaElementSection(RootElement parent) {
destroySections();
addPart(mediaDetailSection);
}
- /**
- * createDerivedUnitBaseElementSection
- *
- * @param parent
- */
private void createDerivedUnitBaseElementSection(RootElement parent) {
destroySections();
}
-
-
- /**
- * @param rootElement
- */
private void createFeatureDistributionSection(RootElement parent) {
destroySections();
addPart(featureDistributionSection);
}
- /**
- * createPolytomousKeyNodeSection
- *
- * @param parent
- */
private void createPolytomousKeyNodeSection(RootElement parent) {
destroySections();
- PolytomousKeyDetailSection polytomousKeyDetailSection = formFactory.createPolytomousKeyDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE | ExpandableComposite.COMPACT);
+ PolytomousKeyDetailSection polytomousKeyDetailSection = formFactory.createPolytomousKeyDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE);
formFactory.createHorizontalSeparator(parent, SWT.BORDER);
PolytomousKeyNodeDetailSection polytomousKeyNodeDetailSection = formFactory.createPolytomousKeyNodeDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
- formFactory.createHorizontalSeparator(parent, SWT.BORDER);
-
- TaxonomicScopeSection taxonomicScopeSection = formFactory.createTaxonomicScopeSection(getConversationHolder(), parent, ExpandableComposite.TWISTIE | ExpandableComposite.COMPACT);
-
addPart(polytomousKeyDetailSection);
addPart(polytomousKeyNodeDetailSection);
- addPart(taxonomicScopeSection);
}
- /**
- * create the UseRecordSection
- *
- * @param parent
- */
private void createUseRecordSection(RootElement parent) {
destroySections();
}
- /**
- * createUserSection
- *
- * @param parent
- */
private void createUserSection(RootElement parent) {
destroySections();
addPart(groupByUserDetailSection);
}
- /**
- * createTaxonRelationshipSection
- *
- * @param parent
- */
private void createTaxonRelationshipSection(RootElement parent) {
destroySections();
addPart(referencedEntityBaseDetailSection);
}
- /**
- * @param rootElement
- */
private void createTermVocabularySection(RootElement parent) {
destroySections();
addPart(termVocabularyDetailSection);
}
- /**
- * createDefinedTermSection
- *
- * @param parent
- */
private void createDefinedTermSection(RootElement parent) {
destroySections();
--- /dev/null
+// $Id$
+/**
+ * Copyright (C) 2015 EDIT
+ * European Distributed Institute of Taxonomy
+ * http://www.e-taxonomy.eu
+ *
+ * The contents of this file are subject to the Mozilla Public License Version 1.1
+ * See LICENSE.TXT at the top of this package for the full license terms.
+ */
+package eu.etaxonomy.taxeditor.view.sessions;
+
+import java.util.List;
+
+import net.sf.ehcache.Cache;
+import net.sf.ehcache.Element;
+
+import org.eclipse.jface.viewers.ILabelProvider;
+import org.eclipse.jface.viewers.ITreeContentProvider;
+import org.eclipse.jface.viewers.StyledCellLabelProvider;
+import org.eclipse.jface.viewers.StyledString;
+import org.eclipse.jface.viewers.TreeViewer;
+import org.eclipse.jface.viewers.Viewer;
+import org.eclipse.jface.viewers.ViewerCell;
+import org.eclipse.swt.SWT;
+import org.eclipse.swt.custom.SashForm;
+import org.eclipse.swt.events.SelectionAdapter;
+import org.eclipse.swt.events.SelectionEvent;
+import org.eclipse.swt.graphics.Image;
+import org.eclipse.swt.layout.GridData;
+import org.eclipse.swt.layout.GridLayout;
+import org.eclipse.swt.widgets.Button;
+import org.eclipse.swt.widgets.Composite;
+import org.eclipse.swt.widgets.Dialog;
+import org.eclipse.swt.widgets.Display;
+import org.eclipse.swt.widgets.Label;
+import org.eclipse.swt.widgets.Shell;
+import org.eclipse.swt.widgets.Text;
+import org.eclipse.ui.dialogs.FilteredTree;
+import org.eclipse.ui.dialogs.PatternFilter;
+import org.eclipse.wb.swt.SWTResourceManager;
+
+import eu.etaxonomy.taxeditor.remoting.cache.CdmModelFieldPropertyFromClass;
+import eu.etaxonomy.taxeditor.remoting.cache.CdmRemoteCacheManager;
+import eu.etaxonomy.taxeditor.remoting.cache.EntityCacherDebugResult;
+import eu.etaxonomy.taxeditor.remoting.cache.EntityCacherDebugResult.CdmEntityInfo;
+import eu.etaxonomy.taxeditor.session.ICdmEntitySession;
+import eu.etaxonomy.taxeditor.store.CdmStore;
+
+/**
+ * @author cmathew
+ * @date 17 Feb 2015
+ *
+ */
+public class InspectSessionsDialog extends Dialog {
+
+ protected Object result;
+ protected Shell shlInspectSessions;
+ private Text txtDebugInfo;
+ private Label lblDebugInformation;
+
+ private final Cache cdmlibModelCache;
+
+ private final ICdmEntitySession activeSession;
+
+ private TreeViewer treeViewer;
+ private Button btnClose;
+ EntityCacherDebugResult ecdr;
+ private SashForm sashForm;
+ private Composite compositeDebug;
+ /**
+ * Create the dialog.
+ * @param parent
+ * @param style
+ */
+ public InspectSessionsDialog(Shell parent, int style) {
+ super(parent, style);
+ setText("Inspect Active Session");
+ cdmlibModelCache = CdmRemoteCacheManager.getInstance().getCdmModelGetMethodsCache();
+ activeSession = CdmStore.getCurrentSessionManager().getActiveSession();
+ ecdr = activeSession.debug();
+ }
+
+ /**
+ * Open the dialog.
+ * @return the result
+ */
+ public Object open() {
+
+ createContents();
+ setDebugInfoText();
+ treeViewer.setContentProvider(new SessionsTreeContentProvider());
+ treeViewer.setLabelProvider(new SessionsTreeLabelProvider());
+ treeViewer.setInput(getRootElements());
+ shlInspectSessions.open();
+ shlInspectSessions.layout();
+ Display display = getParent().getDisplay();
+ while (!shlInspectSessions.isDisposed()) {
+ if (!display.readAndDispatch()) {
+ display.sleep();
+ }
+ }
+ return result;
+ }
+
+ /**
+ * Create contents of the dialog.
+ */
+ private void createContents() {
+ shlInspectSessions = new Shell(getParent(), SWT.DIALOG_TRIM | SWT.RESIZE);
+ shlInspectSessions.setSize(641, 631);
+ shlInspectSessions.setText("Inspect Sessions");
+ shlInspectSessions.setLayout(new GridLayout(1, false));
+
+ sashForm = new SashForm(shlInspectSessions, SWT.VERTICAL);
+ sashForm.setLayoutData(new GridData(SWT.FILL, SWT.FILL, true, true, 1, 1));
+
+ PatternFilter filter = new PatternFilter();
+ FilteredTree tree = new FilteredTree(sashForm, SWT.MULTI | SWT.H_SCROLL | SWT.BORDER
+ | SWT.V_SCROLL, filter, true);
+ treeViewer = tree.getViewer();
+ //treeViewer = new TreeViewer(sashForm, SWT.BORDER);
+ //Tree tree = treeViewer.getTree();
+
+ compositeDebug = new Composite(sashForm, SWT.NONE);
+ compositeDebug.setLayout(new GridLayout(1, false));
+
+ lblDebugInformation = new Label(compositeDebug, SWT.NONE);
+ lblDebugInformation.setAlignment(SWT.CENTER);
+ lblDebugInformation.setLayoutData(new GridData(SWT.CENTER, SWT.CENTER, true, false, 1, 1));
+ lblDebugInformation.setFont(SWTResourceManager.getFont("Ubuntu", 10, SWT.NORMAL));
+ lblDebugInformation.setText("Debug Information");
+
+ txtDebugInfo = new Text(compositeDebug, SWT.BORDER | SWT.READ_ONLY | SWT.H_SCROLL | SWT.V_SCROLL | SWT.CANCEL | SWT.MULTI);
+ txtDebugInfo.setLayoutData(new GridData(SWT.FILL, SWT.FILL, true, true, 1, 1));
+ sashForm.setWeights(new int[] {338, 184});
+
+ btnClose = new Button(shlInspectSessions, SWT.NONE);
+ btnClose.addSelectionListener(new SelectionAdapter() {
+ @Override
+ public void widgetSelected(SelectionEvent e) {
+ shlInspectSessions.dispose();
+ }
+ });
+ GridData gd_btnClose = new GridData(SWT.LEFT, SWT.CENTER, false, false, 1, 1);
+ gd_btnClose.widthHint = 70;
+ btnClose.setLayoutData(gd_btnClose);
+ btnClose.setText("Close");
+
+ }
+
+ private void setDebugInfoText() {
+ txtDebugInfo.setText(ecdr.toString());
+ }
+ private CdmEntityInfo[] getRootElements() {
+
+ List<CdmEntityInfo> rootElemnts = ecdr.getRootElements();
+ return rootElemnts.toArray(new CdmEntityInfo[rootElemnts.size()]);
+ }
+
+ class SessionsTreeContentProvider implements ITreeContentProvider {
+
+
+
+ /* (non-Javadoc)
+ * @see org.eclipse.jface.viewers.IContentProvider#dispose()
+ */
+ @Override
+ public void dispose() {
+
+ }
+
+ /* (non-Javadoc)
+ * @see org.eclipse.jface.viewers.IContentProvider#inputChanged(org.eclipse.jface.viewers.Viewer, java.lang.Object, java.lang.Object)
+ */
+ @Override
+ public void inputChanged(Viewer viewer, Object oldInput, Object newInput) {
+
+
+ }
+
+ /* (non-Javadoc)
+ * @see org.eclipse.jface.viewers.ITreeContentProvider#getElements(java.lang.Object)
+ */
+ @Override
+ public Object[] getElements(Object inputElement) {
+ return (CdmEntityInfo[])inputElement;
+ }
+
+ /* (non-Javadoc)
+ * @see org.eclipse.jface.viewers.ITreeContentProvider#getChildren(java.lang.Object)
+ */
+ @Override
+ public Object[] getChildren(Object parentElement) {
+ List<CdmEntityInfo> children = ((CdmEntityInfo)parentElement).getChildren();
+ return children.toArray();
+ }
+
+ /* (non-Javadoc)
+ * @see org.eclipse.jface.viewers.ITreeContentProvider#getParent(java.lang.Object)
+ */
+ @Override
+ public Object getParent(Object element) {
+ CdmEntityInfo cei = (CdmEntityInfo)element;
+ return cei.getParent();
+ }
+
+ /* (non-Javadoc)
+ * @see org.eclipse.jface.viewers.ITreeContentProvider#hasChildren(java.lang.Object)
+ */
+ @Override
+ public boolean hasChildren(Object element) {
+ List<CdmEntityInfo> children = ((CdmEntityInfo)element).getChildren();
+ if(children != null && !children.isEmpty()) {
+ return true;
+ } else {
+ return false;
+ }
+ }
+
+ public CdmModelFieldPropertyFromClass getFromCdmlibModelCache(String className) {
+ Element e = cdmlibModelCache.get(className);
+ if (e == null) {
+ return null;
+ } else {
+ return (CdmModelFieldPropertyFromClass) e.getObjectValue();
+ }
+ }
+
+ }
+
+ class SessionsTreeLabelProvider extends StyledCellLabelProvider implements ILabelProvider {
+
+ @Override
+ public void update(ViewerCell cell) {
+ CdmEntityInfo cei = (CdmEntityInfo)cell.getElement();
+ StyledString text = new StyledString();
+ if(cei != null) {
+ text.append(cei.getLabel());
+ }
+ cell.setText(text.toString());
+ cell.setStyleRanges(text.getStyleRanges());
+ super.update(cell);
+ }
+
+ /* (non-Javadoc)
+ * @see org.eclipse.jface.viewers.ILabelProvider#getImage(java.lang.Object)
+ */
+ @Override
+ public Image getImage(Object element) {
+ // TODO Auto-generated method stub
+ return null;
+ }
+
+ /* (non-Javadoc)
+ * @see org.eclipse.jface.viewers.ILabelProvider#getText(java.lang.Object)
+ */
+ @Override
+ public String getText(Object element) {
+ CdmEntityInfo cei = (CdmEntityInfo)element;
+ return cei.getLabel();
+ }
+ }
+}
+
+
--- /dev/null
+// $Id$
+/**
+ * Copyright (C) 2015 EDIT
+ * European Distributed Institute of Taxonomy
+ * http://www.e-taxonomy.eu
+ *
+ * The contents of this file are subject to the Mozilla Public License Version 1.1
+ * See LICENSE.TXT at the top of this package for the full license terms.
+ */
+package eu.etaxonomy.taxeditor.view.sessions;
+
+import java.text.DecimalFormat;
+import java.util.Collection;
+
+import net.sf.ehcache.Cache;
+import net.sf.ehcache.CacheManager;
+import net.sf.ehcache.statistics.LiveCacheStatistics;
+
+import org.eclipse.jface.action.IMenuManager;
+import org.eclipse.jface.action.IToolBarManager;
+import org.eclipse.swt.SWT;
+import org.eclipse.swt.events.SelectionAdapter;
+import org.eclipse.swt.events.SelectionEvent;
+import org.eclipse.swt.layout.GridData;
+import org.eclipse.swt.layout.GridLayout;
+import org.eclipse.swt.widgets.Button;
+import org.eclipse.swt.widgets.Composite;
+import org.eclipse.swt.widgets.Label;
+import org.eclipse.swt.widgets.Table;
+import org.eclipse.swt.widgets.TableColumn;
+import org.eclipse.swt.widgets.TableItem;
+import org.eclipse.swt.widgets.Text;
+import org.eclipse.ui.part.ViewPart;
+import org.eclipse.wb.swt.SWTResourceManager;
+
+import eu.etaxonomy.cdm.api.cache.CdmCacher;
+import eu.etaxonomy.taxeditor.model.AbstractUtility;
+import eu.etaxonomy.taxeditor.remoting.cache.CdmRemoteCacheManager;
+import eu.etaxonomy.taxeditor.session.ICdmEntitySession;
+import eu.etaxonomy.taxeditor.session.ICdmEntitySessionManager;
+import eu.etaxonomy.taxeditor.session.ICdmEntitySessionManagerObserver;
+import eu.etaxonomy.taxeditor.session.NullSession;
+import eu.etaxonomy.taxeditor.store.CdmStore;
+
+/**
+ * @author cmathew
+ * @date 16 Feb 2015
+ *
+ */
+public class SessionsViewPart extends ViewPart implements ICdmEntitySessionManagerObserver {
+
+ public static final String ID = "eu.etaxonomy.taxeditor.view.sessions.SessionsViewPart"; //$NON-NLS-1$
+ public static final String OPEN_INSPECT_SESSIONS_DIALOG_ID = "eu.etaxonomy.taxeditor.store.open.InspectSessionsDialog";
+ private Table tableSessions;
+
+ private final String[] titles = { "Owner", "In Memory", "On Disk"};
+
+ private final ICdmEntitySessionManager cdmEntitySessionManager;
+ private Text txtNoOfSessions;
+ private Text txtNoOfCaches;
+ private Text txtDefaultInMemory;
+ private Text txtCdmModelInMemory;
+ private Text txtCdmModelOnDisk;
+ private Text txtDefaultOnDisk;
+
+ public SessionsViewPart() {
+ this.cdmEntitySessionManager = CdmStore.getCurrentSessionManager();
+ if(cdmEntitySessionManager != null) {
+ cdmEntitySessionManager.addSessionObserver(this);
+ }
+ }
+
+ /**
+ * Create contents of the view part.
+ * @param parent
+ */
+ @Override
+ public void createPartControl(Composite parent) {
+ Composite container = new Composite(parent, SWT.NONE);
+ container.setLayout(new GridLayout(5, false));
+ {
+ Label lblNoOfSessions = new Label(container, SWT.NONE);
+ lblNoOfSessions.setFont(SWTResourceManager.getFont("Ubuntu", 10, SWT.NORMAL));
+ lblNoOfSessions.setAlignment(SWT.RIGHT);
+ GridData gd_lblNoOfSessions = new GridData(SWT.RIGHT, SWT.FILL, false, false, 1, 1);
+ gd_lblNoOfSessions.widthHint = 115;
+ gd_lblNoOfSessions.minimumHeight = 30;
+ lblNoOfSessions.setLayoutData(gd_lblNoOfSessions);
+ lblNoOfSessions.setText("No. of Sessions : ");
+ }
+ {
+ txtNoOfSessions = new Text(container, SWT.BORDER);
+ txtNoOfSessions.setEditable(false);
+ txtNoOfSessions.setBackground(SWTResourceManager.getColor(SWT.COLOR_TITLE_INACTIVE_BACKGROUND_GRADIENT));
+ GridData gd_txtNoOfSessions = new GridData(SWT.LEFT, SWT.CENTER, false, false, 1, 1);
+ gd_txtNoOfSessions.widthHint = 50;
+ txtNoOfSessions.setLayoutData(gd_txtNoOfSessions);
+ }
+ new Label(container, SWT.NONE);
+ new Label(container, SWT.NONE);
+ new Label(container, SWT.NONE);
+ {
+ Label lblNoOfCaches = new Label(container, SWT.CENTER);
+ lblNoOfCaches.setAlignment(SWT.RIGHT);
+ lblNoOfCaches.setFont(SWTResourceManager.getFont("Ubuntu", 10, SWT.NORMAL));
+ GridData gd_lblNoOfCaches = new GridData(SWT.RIGHT, SWT.CENTER, false, false, 1, 1);
+ gd_lblNoOfCaches.widthHint = 150;
+ lblNoOfCaches.setLayoutData(gd_lblNoOfCaches);
+ lblNoOfCaches.setText("No. of entity caches : ");
+ }
+ {
+ txtNoOfCaches = new Text(container, SWT.BORDER);
+ txtNoOfCaches.setEditable(false);
+ GridData gd_txtNoOfCaches = new GridData(SWT.LEFT, SWT.CENTER, false, false, 1, 1);
+ gd_txtNoOfCaches.widthHint = 50;
+ txtNoOfCaches.setLayoutData(gd_txtNoOfCaches);
+ }
+ new Label(container, SWT.NONE);
+ new Label(container, SWT.NONE);
+ new Label(container, SWT.NONE);
+
+ {
+ Label lblDefaultCache = new Label(container, SWT.CENTER);
+ lblDefaultCache.setLayoutData(new GridData(SWT.RIGHT, SWT.CENTER, false, false, 1, 1));
+ lblDefaultCache.setText("Default Cache, ");
+ lblDefaultCache.setFont(SWTResourceManager.getFont("Ubuntu", 10, SWT.NORMAL));
+ lblDefaultCache.setAlignment(SWT.RIGHT);
+ }
+ {
+ Label lblDefaultInMemory = new Label(container, SWT.CENTER);
+ lblDefaultInMemory.setText("in Memory : ");
+ lblDefaultInMemory.setFont(SWTResourceManager.getFont("Ubuntu", 10, SWT.NORMAL));
+ lblDefaultInMemory.setAlignment(SWT.RIGHT);
+ lblDefaultInMemory.setLayoutData(new GridData(SWT.RIGHT, SWT.CENTER, false, false, 1, 1));
+ }
+ {
+ txtDefaultInMemory = new Text(container, SWT.BORDER);
+ txtDefaultInMemory.setEditable(false);
+ GridData gd_txtDefaultInMemory = new GridData(SWT.LEFT, SWT.CENTER, false, false, 1, 1);
+ gd_txtDefaultInMemory.widthHint = 130;
+ txtDefaultInMemory.setLayoutData(gd_txtDefaultInMemory);
+ }
+ {
+ Label lblDefaultOnDisk = new Label(container, SWT.CENTER);
+ lblDefaultOnDisk.setLayoutData(new GridData(SWT.RIGHT, SWT.CENTER, false, false, 1, 1));
+ lblDefaultOnDisk.setText("on Disk : ");
+ lblDefaultOnDisk.setFont(SWTResourceManager.getFont("Ubuntu", 10, SWT.NORMAL));
+ lblDefaultOnDisk.setAlignment(SWT.RIGHT);
+ }
+ {
+ txtDefaultOnDisk = new Text(container, SWT.BORDER);
+ txtDefaultOnDisk.setEditable(false);
+ txtDefaultOnDisk.setText("");
+ GridData gd_txtDefaultOnDisk = new GridData(SWT.LEFT, SWT.CENTER, false, false, 1, 1);
+ gd_txtDefaultOnDisk.widthHint = 130;
+ txtDefaultOnDisk.setLayoutData(gd_txtDefaultOnDisk);
+ }
+ {
+ Label lblCdmModelCache = new Label(container, SWT.CENTER);
+ lblCdmModelCache.setLayoutData(new GridData(SWT.RIGHT, SWT.CENTER, false, false, 1, 1));
+ lblCdmModelCache.setText("CDM Model Cache, ");
+ lblCdmModelCache.setFont(SWTResourceManager.getFont("Ubuntu", 10, SWT.NORMAL));
+ lblCdmModelCache.setAlignment(SWT.RIGHT);
+ }
+ {
+ Label lblCdmModelInMemory = new Label(container, SWT.CENTER);
+ lblCdmModelInMemory.setText("in Memory : ");
+ lblCdmModelInMemory.setFont(SWTResourceManager.getFont("Ubuntu", 10, SWT.NORMAL));
+ lblCdmModelInMemory.setAlignment(SWT.RIGHT);
+ GridData gd_lblCdmModelInMemory = new GridData(SWT.RIGHT, SWT.CENTER, false, false, 1, 1);
+ gd_lblCdmModelInMemory.widthHint = 86;
+ lblCdmModelInMemory.setLayoutData(gd_lblCdmModelInMemory);
+ }
+ {
+ txtCdmModelInMemory = new Text(container, SWT.BORDER);
+ txtCdmModelInMemory.setEditable(false);
+ GridData gd_txtCdmModelInMemory = new GridData(SWT.LEFT, SWT.CENTER, false, false, 1, 1);
+ gd_txtCdmModelInMemory.widthHint = 130;
+ txtCdmModelInMemory.setLayoutData(gd_txtCdmModelInMemory);
+ }
+ {
+ Label lblCdmModelOnDisk = new Label(container, SWT.CENTER);
+ lblCdmModelOnDisk.setLayoutData(new GridData(SWT.RIGHT, SWT.CENTER, false, false, 1, 1));
+ lblCdmModelOnDisk.setText("on Disk : ");
+ lblCdmModelOnDisk.setFont(SWTResourceManager.getFont("Ubuntu", 10, SWT.NORMAL));
+ lblCdmModelOnDisk.setAlignment(SWT.RIGHT);
+ }
+ {
+ txtCdmModelOnDisk = new Text(container, SWT.BORDER);
+ txtCdmModelOnDisk.setEditable(false);
+ txtCdmModelOnDisk.setText("");
+ GridData gd_txtCdmModelOnDisk = new GridData(SWT.LEFT, SWT.CENTER, false, false, 1, 1);
+ gd_txtCdmModelOnDisk.widthHint = 130;
+ txtCdmModelOnDisk.setLayoutData(gd_txtCdmModelOnDisk);
+ }
+ {
+ Button btnRefresh = new Button(container, SWT.NONE);
+ btnRefresh.addSelectionListener(new SelectionAdapter() {
+ @Override
+ public void widgetSelected(SelectionEvent e) {
+ changed();
+ }
+ });
+ GridData gd_btnRefresh = new GridData(SWT.FILL, SWT.CENTER, false, false, 1, 1);
+ gd_btnRefresh.widthHint = 100;
+ btnRefresh.setLayoutData(gd_btnRefresh);
+ btnRefresh.setText("Refresh");
+ }
+ {
+ Button btnInspectActiveSession = new Button(container, SWT.NONE);
+ btnInspectActiveSession.addSelectionListener(new SelectionAdapter() {
+ @Override
+ public void widgetSelected(SelectionEvent e) {
+ AbstractUtility.executeCommand(OPEN_INSPECT_SESSIONS_DIALOG_ID, this, null);
+ }
+ });
+ btnInspectActiveSession.setLayoutData(new GridData(SWT.FILL, SWT.FILL, false, false, 2, 1));
+ btnInspectActiveSession.setText("Inspect Active Session");
+ }
+ new Label(container, SWT.NONE);
+ new Label(container, SWT.NONE);
+
+ {
+ tableSessions = new Table(container, SWT.BORDER | SWT.FULL_SELECTION);
+ GridData gd_tableSessions = new GridData(SWT.FILL, SWT.FILL, true, true, 5, 1);
+ gd_tableSessions.widthHint = 769;
+ tableSessions.setLayoutData(gd_tableSessions);
+ tableSessions.setHeaderVisible(true);
+ tableSessions.setLinesVisible(true);
+ }
+
+ createActions();
+ initializeToolBar();
+ initializeMenu();
+ }
+
+ /**
+ * Create the actions.
+ */
+ private void createActions() {
+
+
+ for (String title : titles) {
+ TableColumn column = new TableColumn(tableSessions, SWT.NULL);
+ column.setWidth(200);
+ column.setText(title);
+ }
+ changed();
+
+ }
+
+
+ @Override
+ public void changed() {
+ if(tableSessions.isDisposed()) {
+ return;
+ }
+ tableSessions.removeAll();
+ if(cdmEntitySessionManager != null) {
+ Collection<ICdmEntitySession> sessions = cdmEntitySessionManager.getSessions();
+ txtNoOfSessions.setText(String.valueOf(sessions.size()));
+ for(ICdmEntitySession session : sessions) {
+ addSession(session);
+ }
+ ICdmEntitySession nullSession = cdmEntitySessionManager.getNullSession();
+ if(nullSession != null) {
+ addSession(nullSession);
+ }
+ for (int i=0; i<titles.length; i++) {
+ tableSessions.getColumn (i).pack ();
+ }
+ }
+
+ CdmRemoteCacheManager instance = CdmRemoteCacheManager.getInstance();
+ int cdmEnityCacheSize = CacheManager.create().getCacheNames().length;
+ txtNoOfCaches.setText(String.valueOf(cdmEnityCacheSize));
+
+ Cache defaultCache = CacheManager.create().getCache(CdmCacher.DEFAULT_CACHE_NAME);
+ txtDefaultInMemory.setText("");
+ txtDefaultOnDisk.setText("");
+ if(defaultCache != null) {
+ LiveCacheStatistics liveCacheStatistics = defaultCache.getLiveCacheStatistics();
+ txtDefaultInMemory.setText(getInMemoryStats(liveCacheStatistics));
+ txtDefaultOnDisk.setText(getOnDiskStats(liveCacheStatistics));
+ }
+
+ Cache cdmModelGetMethodsCache = instance.getCdmModelGetMethodsCache();
+ txtCdmModelInMemory.setText("");
+ txtCdmModelOnDisk.setText("");
+ if(cdmModelGetMethodsCache != null) {
+ LiveCacheStatistics liveCacheStatistics = cdmModelGetMethodsCache.getLiveCacheStatistics();
+ txtCdmModelInMemory.setText(getInMemoryStats(liveCacheStatistics));
+ txtCdmModelOnDisk.setText(getOnDiskStats(liveCacheStatistics));
+ }
+
+ }
+
+ private void addSession(ICdmEntitySession session) {
+
+ TableItem item = new TableItem(tableSessions, SWT.NULL);
+
+ String activePrefix = "";
+ if(session.isActive()) {
+ activePrefix = "*";
+ }
+ String sessionOwnerString = "";
+ if(session instanceof NullSession) {
+ sessionOwnerString = "Null Session";
+ } else {
+ if(session.getOwner() != null) {
+ sessionOwnerString = session.getOwner().toString();
+ }
+ }
+ item.setText(0, activePrefix + sessionOwnerString);
+ LiveCacheStatistics cacheStatistics = session.getCacheStatistics();
+ item.setText(1, getInMemoryStats(cacheStatistics));
+ item.setText(2, getOnDiskStats(cacheStatistics));
+ }
+
+ private String getInMemoryStats(LiveCacheStatistics statistics) {
+ if(statistics != null) {
+ long localHeapSize = statistics.getLocalHeapSize();
+
+ long localHeapSizeInBytes = statistics.getLocalHeapSizeInBytes();
+ String localHeapSizeInBytesStr =
+ (new DecimalFormat("#.##")).format(localHeapSizeInBytes/1048576.0);
+ return String.valueOf(localHeapSize) + " objects / " + localHeapSizeInBytesStr + " Mb";
+ }
+ return "";
+ }
+
+ private String getOnDiskStats(LiveCacheStatistics statistics) {
+ if(statistics != null) {
+ long localDiskSize = statistics.getLocalDiskSize();
+
+ long localDiskSizeInBytes = statistics.getLocalDiskSizeInBytes();
+ String localDiskSizeInBytesStr =
+ (new DecimalFormat("#.##")).format(localDiskSizeInBytes/1048576.0);
+ return String.valueOf(localDiskSize) + " objects / " + localDiskSizeInBytesStr + " Mb";
+ }
+ return "";
+ }
+
+ /**
+ * Initialize the toolbar.
+ */
+ private void initializeToolBar() {
+ IToolBarManager toolbarManager = getViewSite().getActionBars().getToolBarManager();
+ }
+
+ /**
+ * Initialize the menu.
+ */
+ private void initializeMenu() {
+ IMenuManager menuManager = getViewSite().getActionBars().getMenuManager();
+ }
+
+ @Override
+ public void setFocus() {
+ // Set the focus
+ }
+
+}
// TODO Auto-generated method stub
return false;
}
-
-
}
+++ /dev/null
-### ************ APPENDER ***********************************###
-
-### direct log messages to stdout ###
-log4j.appender.stdout=org.apache.log4j.ConsoleAppender
-log4j.appender.stdout.Target=System.out
-log4j.appender.stdout.layout=org.apache.log4j.PatternLayout
-log4j.appender.stdout.layout.ConversionPattern=%d{ABSOLUTE} %5p %c{1}:%L - %m%n
-
-### direct messages to file hibernate.log ###
-log4j.appender.file=org.apache.log4j.FileAppender
-log4j.appender.file.File=taxeditor.log
-log4j.appender.file.layout=org.apache.log4j.PatternLayout
-log4j.appender.file.layout.ConversionPattern=%d{ABSOLUTE} %5p %c{1}:%L - %m%n
-
-### ************* LOG LEVELS *********************************###
-
-### set log levels - for more verbose logging change 'info' to 'debug' ###
-### levels: error, warn, debug, info
-log4j.rootLogger=INFO, stdout
-
-### set directory-specific levels below
-
-### basic level for editor directory
-log4j.logger.eu.etaxonomy.taxeditor = WARN, stdout
-
-log4j.logger.eu.etaxonomy.taxeditor.store = DEBUG, stdout
-
-### log level for conversation handler
-#log4j.logger.eu.etaxonomy.cdm.api.application = DEBUG, stdout
// $Id$
/**
* Copyright (C) 2007 EDIT
-* European Distributed Institute of Taxonomy
+* European Distributed Institute of Taxonomy
* http://www.e-taxonomy.eu
-*
+*
* The contents of this file are subject to the Mozilla Public License Version 1.1
* See LICENSE.TXT at the top of this package for the full license terms.
*/
import eu.etaxonomy.cdm.model.taxon.Taxon;
import eu.etaxonomy.taxeditor.operation.AbstractPostOperation;
import eu.etaxonomy.taxeditor.operation.IPostOperationEnabled;
+import eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled;
/**
* @author n.hoffmann
* @version 1.0
*/
public abstract class AbstractTaxeditorOperationTestBase {
-
+
public static final IUndoContext undoContext = null;
-
+
public static final IProgressMonitor monitor = null;
- public static final IAdaptable info = null;
+ public static final IAdaptable info = null;
public static final IPostOperationEnabled postOperation = null;
-
+ public static final ICdmEntitySessionEnabled cdmEntitySessionEnabled = null;
+
protected static AbstractPostOperation operation;
protected static Taxon taxon;
}
--- /dev/null
+// $Id$
+/**
+* Copyright (C) 2015 EDIT
+* European Distributed Institute of Taxonomy
+* http://www.e-taxonomy.eu
+*
+* The contents of this file are subject to the Mozilla Public License Version 1.1
+* See LICENSE.TXT at the top of this package for the full license terms.
+*/
+package eu.etaxonomy.taxeditor.store.operations;
+
+import org.eclipse.core.runtime.IAdaptable;
+import org.eclipse.core.runtime.IProgressMonitor;
+
+import eu.etaxonomy.cdm.api.application.CdmApplicationState;
+import eu.etaxonomy.cdm.api.application.CdmChangeEvent.Action;
+import eu.etaxonomy.cdm.api.service.ITestService;
+import eu.etaxonomy.cdm.api.service.UpdateResult;
+import eu.etaxonomy.cdm.api.service.dto.CdmEntityIdentifier;
+import eu.etaxonomy.taxeditor.operation.RemotingCdmUpdateOperation;
+
+/**
+ * @author cmathew
+ * @date 26 Jun 2015
+ *
+ */
+public class RemotingTestUpdateOperation extends RemotingCdmUpdateOperation {
+
+ private static String LABEL = "Test Operation";
+
+ private UpdateResult result;
+ private Exception exception;
+ private CdmEntityIdentifier cei;
+
+
+ /**
+ * @param label
+ * @param action
+ * @param source
+ * @param async
+ */
+ public RemotingTestUpdateOperation(UpdateResult result,
+ Object source,
+ boolean async) {
+ super(LABEL, Action.Update, source, async);
+ this.result = result;
+ }
+
+ public RemotingTestUpdateOperation(Exception exception,
+ Object source,
+ boolean async) {
+ super(LABEL, Action.Update, source, async);
+ this.exception = exception;
+ }
+
+ public RemotingTestUpdateOperation(CdmEntityIdentifier cei,
+ Object source,
+ boolean async) {
+ super(LABEL, Action.Update, source, async);
+ this.cei = cei;
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.operation.RemotingCdmUpdateOperation#doUpdateExecute(org.eclipse.core.runtime.IProgressMonitor, org.eclipse.core.runtime.IAdaptable)
+ */
+ @Override
+ protected UpdateResult doUpdateExecute(IProgressMonitor monitor, IAdaptable info) throws Exception {
+ ITestService testService = CdmApplicationState.getTestService();
+ if(result != null) {
+ return testService.returnResult(result);
+ } else if(exception != null) {
+ return testService.throwException(exception);
+ } else if(cei != null) {
+ return testService.addChild(cei);
+ }
+ return null;
+ }
+
+}
+++ /dev/null
-### ************ APPENDER ***********************************###
-
-### direct log messages to stdout ###
-log4j.appender.stdout=org.apache.log4j.ConsoleAppender
-log4j.appender.stdout.Target=System.out
-log4j.appender.stdout.layout=org.apache.log4j.PatternLayout
-log4j.appender.stdout.layout.ConversionPattern=%d{ABSOLUTE} %5p %c{1}:%L - %m%n
-
-### direct messages to file hibernate.log ###
-log4j.appender.file=org.apache.log4j.FileAppender
-log4j.appender.file.File=hibernate.log
-log4j.appender.file.layout=org.apache.log4j.PatternLayout
-log4j.appender.file.layout.ConversionPattern=%d{ABSOLUTE} %5p %c{1}:%L - %m%n
-
-
-### ************* LOG LEVELS *********************************###
-
-### set log levels - for more verbose logging change 'info' to 'debug' ###
-
-log4j.rootLogger=info, stdout, file
-
- ### *** CDM *** ###
-
-log4j.logger.eu.etaxonomy.cdm = info
-log4j.logger.eu.etaxonomy.cdm.database.init = warn
-#
-log4j.logger.eu.etaxonomy.cdm.model.common.init = warn
-#
-log4j.logger.eu.etaxonomy.cdm.test.integration = info
-log4j.logger.eu.etaxonomy.cdm.api.application = warn
-log4j.logger.eu.etaxonomy.cdm.api.service = info
-#log4j.logger.eu.etaxonomy.cdm.database.VocabularyStoreImpl = warn
-#
-log4j.logger.eu.etaxonomy.cdm.database = warn
-log4j.logger.eu.etaxonomy.cdm.persistence.dao.hibernate.common = warn
-
-
-
- ### *** SPRING ************ ###
-log4j.logger.org.springframework.transaction = warn
-log4j.logger.org.hibernate.engine.LoadContexts = warn
-log4j.logger.org.springframework.orm.hibernate3.SessionFactoryUtils = warn
-log4j.logger.org.springframework.orm.hibernate3 = warn
-log4j.logger.org.springframework.FileSystemXmlApplicationContext = warn;
-log4j.logger.org.springframework.core.io.support = warn
-
-
- ### ***HIBERNATE ************ ###
-
-log4j.logger.org.hibernate=warn
-
-### No warnings as thrown by SQLServer
-###log4j.logger.org.hibernate.cfg = warn
-
-### No warnings as thrown by SQLServer
-log4j.logger.org.hibernate.util.JDBCExceptionReporter = error
-
-### log HQL query parser activity
-#log4j.logger.org.hibernate.hql.ast.AST=debug
-
-### log just the SQL
-log4j.logger.org.hibernate.SQL=warn
-
-### log JDBC bind parameters ###
-log4j.logger.org.hibernate.type=warn
-
-### log schema export/update ###
-log4j.logger.org.hibernate.tool.hbm2ddl=warn
-
-### log HQL parse trees
-log4j.logger.org.hibernate.hql=debug
-log4j.logger.org.hibernate.hql.ast=warn
-
-### log cache activity ###
-#log4j.logger.org.hibernate.cache=debug
-
-### log transaction activity
-#log4j.logger.org.hibernate.transaction=debug
-
-### log JDBC resource acquisition
-log4j.logger.org.hibernate.jdbc=info
-
-### enable the following line if you want to track down connection ###
-### leakages when using DriverManagerConnectionProvider ###
-#log4j.logger.org.hibernate.connection.DriverManagerConnectionProvider=trace
-
-
- ### *** Profiling Logger ************ ###
-
-#log4j.logger.org.springframework.aop.interceptor.PerformanceMonitorInterceptor=TRACE, profiling
-### Profiling output
-#log4j.appender.profiling=org.apache.log4j.RollingFileAppender
-#log4j.appender.profiling.File=profiling.log
-#log4j.appender.profiling.MaxFileSize=1024KB
-#log4j.appender.profiling.MaxBackupIndex=1
-#log4j.appender.profiling.layout=org.apache.log4j.PatternLayout
-#log4j.appender.profiling.layout.conversionPattern=%d,%p,%m%n
-
<classpath>
<classpathentry kind="con" path="org.eclipse.jdt.launching.JRE_CONTAINER/org.eclipse.jdt.internal.debug.ui.launcher.StandardVMType/JavaSE-1.6"/>
<classpathentry kind="con" path="org.eclipse.pde.core.requiredPlugins"/>
- <classpathentry kind="src" path="src/test/java"/>
- <classpathentry kind="src" path="src/main/resources"/>
+ <classpathentry including="**/*.java" kind="src" path="src/test/java"/>
+ <classpathentry excluding="**/*.java" kind="src" path="src/test/resources"/>
+ <classpathentry exported="true" kind="lib" path="lib/byte-buddy-0.5.1.jar"/>
+ <classpathentry exported="true" kind="lib" path="lib/org.springframework.context-3.2.2.RELEASE.jar"/>
+ <classpathentry exported="true" kind="lib" path="lib/unitils-core-3.4.2.jar"/>
+ <classpathentry exported="true" kind="lib" path="lib/unitils-database-3.4.2.jar"/>
+ <classpathentry exported="true" kind="lib" path="lib/unitils-dbmaintainer-3.4.2.jar"/>
+ <classpathentry exported="true" kind="lib" path="lib/unitils-dbunit-3.4.2.jar"/>
+ <classpathentry exported="true" kind="lib" path="lib/unitils-spring-3.4.2.jar"/>
+ <classpathentry exported="true" kind="lib" path="lib/dbunit-2.4.9.jar"/>
<classpathentry kind="output" path="target/classes"/>
</classpath>
-<?xml version="1.0" encoding="UTF-8"?>
<projectDescription>
- <name>eu.etaxonomy.taxeditor.test</name>
- <comment></comment>
- <projects>
- </projects>
- <buildSpec>
- <buildCommand>
- <name>org.eclipse.jdt.core.javabuilder</name>
- <arguments>
- </arguments>
- </buildCommand>
- <buildCommand>
- <name>org.eclipse.pde.ManifestBuilder</name>
- <arguments>
- </arguments>
- </buildCommand>
- <buildCommand>
- <name>org.eclipse.pde.SchemaBuilder</name>
- <arguments>
- </arguments>
- </buildCommand>
- </buildSpec>
- <natures>
- <nature>org.eclipse.pde.PluginNature</nature>
- <nature>org.eclipse.jdt.core.javanature</nature>
- </natures>
-</projectDescription>
+ <name>eu.etaxonomy.taxeditor.test</name>
+ <comment>Holds all UI tests for the Taxonomic Editor. NO_M2ECLIPSE_SUPPORT: Project files created with the maven-eclipse-plugin are not supported in M2Eclipse.</comment>
+ <projects/>
+ <buildSpec>
+ <buildCommand>
+ <name>org.eclipse.jdt.core.javabuilder</name>
+ </buildCommand>
+ </buildSpec>
+ <natures>
+ <nature>org.eclipse.jdt.core.javanature</nature>
+ <nature>org.eclipse.pde.PluginNature</nature>
+ </natures>
+</projectDescription>
\ No newline at end of file
-#Wed Oct 05 13:31:15 CEST 2011
eclipse.preferences.version=1
org.eclipse.jdt.core.compiler.codegen.inlineJsrBytecode=enabled
org.eclipse.jdt.core.compiler.codegen.targetPlatform=1.6
Bundle-ManifestVersion: 2
Bundle-Name: eu.etaxonomy.taxeditor.test
Bundle-SymbolicName: eu.etaxonomy.taxeditor.test;singleton:=true
-Bundle-Version: 3.6.1.qualifier
+Bundle-Version: 3.12.0.qualifier
Bundle-ActivationPolicy: lazy
Bundle-Vendor: EDIT
Bundle-RequiredExecutionEnvironment: JavaSE-1.6
-Require-Bundle: org.apache.log4j,
- org.eclipse.ui,
+Require-Bundle: org.eclipse.ui,
org.eclipse.core.runtime,
- org.eclipse.swtbot.eclipse.core,
- org.eclipse.swtbot.eclipse.finder,
- org.eclipse.swtbot.junit4_x,
org.eclipse.ui.ide,
- eu.etaxonomy.taxeditor.application,
- eu.etaxonomy.taxeditor.bulkeditor,
+ org.junit;bundle-version="4.8.2",
eu.etaxonomy.taxeditor.cdmlib,
+ eu.etaxonomy.taxeditor.bulkeditor,
eu.etaxonomy.taxeditor.editor,
eu.etaxonomy.taxeditor.help,
eu.etaxonomy.taxeditor.navigation,
eu.etaxonomy.taxeditor.printpublisher,
- eu.etaxonomy.taxeditor.store
-Eclipse-RegisterBuddy: org.apache.log4j
+ eu.etaxonomy.taxeditor.store,
+ org.apache.log4j,
+ org.hamcrest,
+ org.eclipse.swtbot.eclipse.core,
+ org.eclipse.swtbot.eclipse.finder
+Eclipse-RegisterBuddy: org.apache.log4j, org.eclipse.swtbot.swt.finder
+Bundle-ClassPath: .,
+ lib/byte-buddy-0.5.1.jar,
+ lib/org.springframework.context-3.2.2.RELEASE.jar,
+ lib/unitils-core-3.4.2.jar,
+ lib/unitils-database-3.4.2.jar,
+ lib/unitils-dbmaintainer-3.4.2.jar,
+ lib/unitils-dbunit-3.4.2.jar,
+ lib/unitils-spring-3.4.2.jar,
+ lib/dbunit-2.4.9.jar
\ No newline at end of file
-source.. = src/test/java/
+source.. = src/test/java/,\
+ src/test/resources/
bin.includes = META-INF/,\
- .
+ .,\
+ lib/byte-buddy-0.5.1.jar,\
+ lib/org.springframework.context-3.2.2.RELEASE.jar,\
+ lib/unitils-core-3.4.2.jar,\
+ lib/unitils-database-3.4.2.jar,\
+ lib/unitils-dbmaintainer-3.4.2.jar,\
+ lib/unitils-dbunit-3.4.2.jar,\
+ lib/unitils-spring-3.4.2.jar,\
+ lib/dbunit-2.4.9.jar,\
+ src/test/resources/
+output.. = target/classes
<?xml version="1.0" encoding="UTF-8"?>\r
<project>\r
\r
- <parent>\r
- <groupId>eu.etaxonomy</groupId>\r
- <artifactId>taxeditor-parent</artifactId>\r
- <version>3.4.0-SNAPSHOT</version>\r
- </parent>\r
- <modelVersion>4.0.0</modelVersion>\r
- <artifactId>eu.etaxonomy.taxeditor.test</artifactId>\r
- <packaging>eclipse-test-plugin</packaging>\r
- <name>UI Test Bundle</name>\r
- <description>Holds all UI tests for the Taxonomic Editor</description>\r
- <!-- <repositories> -->\r
- <!-- <repository> -->\r
- <!-- <id>ganymede</id> -->\r
- <!-- <layout>p2</layout> -->\r
- <!-- <url>http://download.eclipse.org/releases/galileo</url> -->\r
- <!-- </repository> -->\r
- <!-- <repository> -->\r
- <!-- <id>swtbot</id> -->\r
- <!-- <layout>p2</layout> -->\r
- <!-- <url>http://download.eclipse.org/technology/swtbot/galileo/dev-build/update-site</url> -->\r
- <!-- </repository> -->\r
- <!-- </repositories> -->\r
-\r
- <build>\r
- <plugins>\r
- <plugin>\r
- <groupId>org.eclipse.tycho</groupId>\r
- <artifactId>tycho-maven-plugin</artifactId>\r
- <version>${tycho.version}</version>\r
- <extensions>true</extensions>\r
- </plugin>\r
- <plugin>\r
- <groupId>org.eclipse.tycho</groupId>\r
- <artifactId>target-platform-configuration</artifactId>\r
- <version>${tycho.version}</version>\r
- <configuration>\r
- <resolver>p2</resolver>\r
- </configuration>\r
- </plugin>\r
- <plugin>\r
- <groupId>org.eclipse.tycho</groupId>\r
- <artifactId>tycho-surefire-plugin</artifactId>\r
- <version>${tycho.version}</version>\r
- <configuration>\r
- <useUIHarness>true</useUIHarness>\r
- <useUIThread>false</useUIThread>\r
- <includes>\r
- <include>**/*Test.java</include>\r
- </includes>\r
- <product>eu.etaxonomy.taxeditor.application.eu_etaxonomy_taxeditor_product</product>\r
- <application>eu.etaxonomy.taxeditor.application.application</application>\r
- <!-- <dependency>
- <type>p2-installable-unit</type>
- <artifactId>eu.etaxonomy.taxeditor.product</artifactId>
- <version>0.0.0</version>
- </dependency> -->\r
- </configuration>\r
- </plugin>\r
- <!-- <plugin>
- <groupId>org.eclipse.tycho</groupId>
- <artifactId>maven-osgi-test-plugin</artifactId>
- <version>${tycho.version}</version>
- <configuration>
- <useUIHarness>true</useUIHarness>
- <useUIThread>false</useUIThread>
- <product>eu.etaxonomy.taxeditor.application.eu_etaxonomy_taxeditor_product</product>
- <application>org.eclipse.ui.ide.workbench</application>
- <dependencies>
- <dependency>
- <type>p2-installable-unit</type>
- <artifactId>eu.etaxonomy.taxeditor.application.eu_etaxonomy_taxeditor_product</artifactId>
- <version>0.0.0</version>
- </dependency>
- </dependencies>
- </configuration>
- </plugin> -->\r
- </plugins>\r
- </build>\r
+ <parent>\r
+ <groupId>eu.etaxonomy</groupId>\r
+ <artifactId>taxeditor-parent</artifactId>\r
+ <version>3.12.0-SNAPSHOT</version>\r
+ </parent>\r
+ <modelVersion>4.0.0</modelVersion>\r
+ <artifactId>eu.etaxonomy.taxeditor.test</artifactId>\r
+ <packaging>eclipse-test-plugin</packaging>\r
+ <name>UI Test Bundle</name>\r
+ <description>Holds all Tests for the Taxonomic Editor</description>\r
+ <build>\r
+ <plugins>\r
+ <plugin>\r
+ <groupId>org.eclipse.tycho</groupId>\r
+ <artifactId>target-platform-configuration</artifactId>\r
+ <version>${tycho.version}</version>\r
+ <configuration>\r
+ <filters>\r
+ <!-- Work around for https://bugs.eclipse.org/bugs/show_bug.cgi?id=348045 -->\r
+ <!-- taken from https://wiki.eclipse.org/index.php?title=Tycho/Target_Platform#Filtering -->\r
+ <filter>\r
+ <type>p2-installable-unit</type>\r
+ <id>org.eclipse.equinox.servletbridge.extensionbundle</id>\r
+ <removeAll />\r
+ </filter>\r
+ </filters>\r
+ </configuration>\r
+ </plugin>\r
+ <plugin>\r
+ <groupId>org.eclipse.tycho</groupId>\r
+ <artifactId>tycho-surefire-plugin</artifactId>\r
+ <version>${tycho.version}</version>\r
+ <configuration>\r
+ <!-- currently we run only the non-ui unit tests so we don't the \r
+ harness -->\r
+ <!-- <useUIHarness>true</useUIHarness> -->\r
+ <dependencies>\r
+ <!-- This will pull the feature and its dependent plugins into \r
+ the classpath for the tests. Note that this requires ALL taxeditor projects \r
+ to be installed. -->\r
+ <dependency>\r
+ <type>eclipse-feature</type>\r
+ <artifactId>eu.etaxonomy.taxeditor.feature</artifactId>\r
+ <!-- This is the minimum required version -->\r
+ <version>1.0.0</version>\r
+ </dependency>\r
+ </dependencies>\r
+ </configuration>\r
+ </plugin>\r
+ <plugin>\r
+ <groupId>org.eclipse.jetty</groupId>\r
+ <artifactId>jetty-maven-plugin</artifactId>\r
+ <version>9.2.9.v20150224</version>\r
+ <configuration>\r
+ <jvmArgs>-Xmx512m -XX:MaxPermSize=512m</jvmArgs>\r
+ <systemProperties>\r
+ <systemProperty>\r
+ <name>spring.profiles.active</name>\r
+ <value>remoting</value>\r
+ </systemProperty>\r
+ <systemProperty>\r
+ <name>cdm.beanDefinitionFile</name>\r
+ <value>${basedir}/src/test/resources/datasources.xml</value>\r
+ </systemProperty>\r
+ <systemProperty>\r
+ <name>cdm.datasource</name>\r
+ <value>cdmTest</value>\r
+ </systemProperty>\r
+ </systemProperties>\r
+ <stopPort>9191</stopPort>\r
+ <stopKey>jetty-cdm-server</stopKey>\r
+ <stopWait>10</stopWait>\r
+ <httpConnector>\r
+ <port>9090</port>\r
+ </httpConnector>\r
+ <war>${project.parent.basedir}/eu.etaxonomy.taxeditor.cdmlib/src/main/resources/etc/jetty/cdmlib-remote-webapp.war</war>\r
+ <daemon>true</daemon>\r
+ </configuration>\r
+ <executions>\r
+ <execution>\r
+ <id>start-jetty</id>\r
+ <phase>pre-integration-test</phase>\r
+ <goals>\r
+ <goal>deploy-war</goal>\r
+ </goals>\r
+ <configuration>\r
+ <scanIntervalSeconds>0</scanIntervalSeconds>\r
+ </configuration>\r
+ </execution>\r
+ <execution>\r
+ <id>stop-jetty</id>\r
+ <phase>post-integration-test</phase>\r
+ <goals>\r
+ <goal>stop</goal>\r
+ </goals>\r
+ </execution>\r
+ </executions>\r
+ </plugin>\r
+ </plugins>\r
+ </build>\r
</project>
\ No newline at end of file
+++ /dev/null
-<?xml version="1.0" encoding="UTF-8" ?>
-<!DOCTYPE log4j:configuration SYSTEM "log4j.dtd">
-<log4j:configuration xmlns:log4j="http://jakarta.apache.org/log4j/"
- debug="false">
-
- <appender name="consoleAppender" class="org.apache.log4j.ConsoleAppender">
- <param name="Target" value="System.out" />
- <layout class="org.apache.log4j.PatternLayout">
- <param name="ConversionPattern"
- value="%d{dd MMM yyyy HH:mm:ss.SSS} - %25t - %-5p - %30c{1} - (%C{1}.java:%L) - %m%n" />
- </layout>
- </appender>
-
- <appender name="fileAppender" class="org.apache.log4j.FileAppender">
- <param name="File" value="/tmp/debug.log" />
- <param name="Append" value="false" />
- <layout class="org.apache.log4j.PatternLayout">
- <param name="ConversionPattern"
- value="%d{dd MMM yyyy HH:mm:ss.SSS} - %25t - %-5p - %30c{1} - (%C{1}.java:%L) - %m%n" />
- </layout>
- </appender>
-
- <appender name="asyncAppender" class="org.apache.log4j.AsyncAppender">
- <!-- appender-ref ref="consoleAppender" / -->
- <appender-ref ref="fileAppender" />
- </appender>
-
- <!-- don't log matchers, this is very high amount of chatter -->
- <category name="org.eclipse.swtbot.swt.finder.matchers">
- <priority value="OFF" />
- </category>
-
- <!--
- don't log widget notification events, this is moderately high chatter
- -->
- <category name="org.eclipse.swtbot.swt.finder.widgets">
- <priority value="OFF" />
- </category>
-
- <!-- don't log finders, this is moderate chatter -->
- <category name="org.eclipse.swtbot.swt.finder.finders">
- <priority value="DEBUG" />
- </category>
-
- <category name="org.eclipse.swtbot.swt.finder.keyboard">
- <!-- set to a value higher than debug to turn on. -->
- <priority value="DEBUG" />
- </category>
-
- <category name="org.eclipse.swtbot">
- <priority value="ALL" />
- </category>
-
- <root>
- <priority value="INFO" />
- <appender-ref ref="consoleAppender" />
- <appender-ref ref="fileAppender" />
- </root>
-
-</log4j:configuration>
\ No newline at end of file
--- /dev/null
+// $Id$
+/**
+* Copyright (C) 2014 EDIT
+* European Distributed Institute of Taxonomy
+* http://www.e-taxonomy.eu
+*
+* The contents of this file are subject to the Mozilla Public License Version 1.1
+* See LICENSE.TXT at the top of this package for the full license terms.
+*/
+package eu.etaxonomy.cdm.api.cache;
+
+import java.util.Arrays;
+import java.util.Iterator;
+import java.util.List;
+import java.util.Map;
+import java.util.Set;
+import java.util.UUID;
+
+import org.apache.log4j.Logger;
+import org.junit.Assert;
+import org.junit.BeforeClass;
+import org.junit.Test;
+import org.unitils.dbunit.annotation.DataSet;
+
+import eu.etaxonomy.cdm.api.service.ICommonService;
+import eu.etaxonomy.cdm.api.service.IPolytomousKeyNodeService;
+import eu.etaxonomy.cdm.api.service.IPolytomousKeyService;
+import eu.etaxonomy.cdm.api.service.ITaxonService;
+import eu.etaxonomy.cdm.model.common.CdmBase;
+import eu.etaxonomy.cdm.model.common.Language;
+import eu.etaxonomy.cdm.model.common.LanguageString;
+import eu.etaxonomy.cdm.model.description.KeyStatement;
+import eu.etaxonomy.cdm.model.description.PolytomousKey;
+import eu.etaxonomy.cdm.model.description.PolytomousKeyNode;
+import eu.etaxonomy.taxeditor.httpinvoker.RemotingSessionAwareTest;
+import eu.etaxonomy.taxeditor.remoting.cache.CdmTransientEntityCacher;
+
+/**
+ * @author cmathew
+ * @date 7 Oct 2014
+ *
+ */
+@DataSet
+public class CdmClientCachingTest extends RemotingSessionAwareTest {
+
+ private static final Logger logger = Logger.getLogger(CdmClientCachingTest.class);
+
+ private final UUID polytomousKeyUuid = UUID.fromString("0d53ba20-7de4-4baa-bd8a-401048447d66");
+ private final UUID taxon1Uuid = UUID.fromString("2b336df7-29e8-4f79-985f-66502739d22f");
+ private final UUID polytomousKeyNodeUuid1 = UUID.fromString("75e4c924-ff58-4ee7-a59d-fd9173517d08");
+ private final UUID polytomousKeyNodeUuid2 = UUID.fromString("b775c027-13c0-4b87-8aa9-712faeaafbdc");
+
+
+ private final IPolytomousKeyService polytomousKeyService = getRemoteApplicationController().getPolytomousKeyService();
+ private final IPolytomousKeyNodeService polytomousKeyNodeService = getRemoteApplicationController().getPolytomousKeyNodeService();
+ private final ICommonService commonService = getRemoteApplicationController().getCommonService();
+ private final ITaxonService taxonService = getRemoteApplicationController().getTaxonService();
+
+
+ private static final List<String> PKEY_DEPTH1_INIT_STRATEGY = Arrays.asList(new String[] {
+ });
+
+ private static final List<String> PKEY_DEPTH2_INIT_STRATEGY = Arrays.asList(new String[] {
+ "root"});
+
+ private static final List<String> PKEY_DEPTH3_INIT_STRATEGY = Arrays.asList(new String[] {
+ "root.statement"});
+
+
+ @BeforeClass
+ public static void initializePolytomousKeyTest() {
+
+ }
+
+
+
+
+ @Test
+ public void recursiveLoadSubGraphDepth1Test() {
+
+ // this call will load into the session cache the graph
+ // polytomous key
+ // |- root : polytomous key node
+ // in a recursive call
+ PolytomousKey pkey1 = CdmBase.deproxy(polytomousKeyService.load(polytomousKeyUuid, PKEY_DEPTH1_INIT_STRATEGY),PolytomousKey.class);
+
+
+ // checking to make sure the root object is in the session cache
+ Assert.assertSame(pkey1.getRoot(), cacher.getFromCache(pkey1.getRoot()));
+
+ }
+
+
+ @Test
+ public void recursiveLoadSubGraphDepth2Test() {
+
+ // this call will load into the session cache the graph
+ // polytomous key
+ // |- root : polytomous key node
+ // |- question : KeyStatement
+ // |- statement : KeyStatement
+ // in a recursive call
+ PolytomousKey pkey = CdmBase.deproxy(polytomousKeyService.load(polytomousKeyUuid, PKEY_DEPTH2_INIT_STRATEGY),PolytomousKey.class);
+ CdmTransientEntityCacher cacher = getCacher(sessionOwner);
+ // checking to make sure the root object is in the session cache
+ Assert.assertSame(pkey.getRoot(), cacher.getFromCache(pkey.getRoot()));
+ Assert.assertSame(pkey.getRoot().getStatement(), cacher.getFromCache(pkey.getRoot().getStatement()));
+ Assert.assertSame(pkey.getRoot().getQuestion(), cacher.getFromCache(pkey.getRoot().getQuestion()));
+
+ }
+
+ /**
+ * when : retrieving objects using recursive caching of object graphs with different depths
+ * then : the objects in the sub-graph having the same persistence id should be the same
+ */
+ @Test
+ public void lazyLoadRecursiveTest() {
+
+ // this call will load into the session cache the graph and update the objects in the sub-graph for a
+ // polytomous key
+ // |- root : polytomous key node
+ // |- question : KeyStatement
+ // |- statement : KeyStatement
+ PolytomousKey pkey1 = CdmBase.deproxy(polytomousKeyService.find(polytomousKeyUuid),PolytomousKey.class);
+
+ CdmTransientEntityCacher cacher = getCacher(sessionOwner);
+
+ }
+
+
+ /**
+ * when : retrieving objects using recursive caching of object graphs with different depths
+ * then : the objects in the sub-graph having the same persistence id should be the same
+ */
+ @Test
+ public void differentSubGraphDepthTest1() {
+
+ // this call will load into the session cache the graph and update the objects in the sub-graph for a
+ // polytomous key
+ // |- root : polytomous key node
+ // in a recursive call
+ PolytomousKey pkey1 = CdmBase.deproxy(polytomousKeyService.load(polytomousKeyUuid, PKEY_DEPTH1_INIT_STRATEGY),PolytomousKey.class);
+ KeyStatement ks1 = CdmBase.deproxy(pkey1.getRoot().getStatement(), KeyStatement.class);
+
+ CdmTransientEntityCacher cacher = getCacher(sessionOwner);
+
+ // this call will load into the session cache the graph and update the objects in the sub-graph for a
+ // polytomous key
+ // |- root : polytomous key node
+ // |- question : KeyStatement
+ // |- statement : KeyStatement
+ PolytomousKey pkey2 = CdmBase.deproxy(polytomousKeyService.load(polytomousKeyUuid, PKEY_DEPTH3_INIT_STRATEGY),PolytomousKey.class);
+
+ KeyStatement ks2 = CdmBase.deproxy(pkey2.getRoot().getStatement(), KeyStatement.class);
+
+ Assert.assertSame(ks2, cacher.getFromCache(ks2));
+ Assert.assertSame(cacher.getFromCache(KeyStatement.class, ks1.getId()), cacher.getFromCache(ks2));
+
+ }
+
+ /**
+ * when : retrieving objects using recursive caching of object graphs with different depths
+ * then : the objects in the sub-graph having the same persistence id should be the same
+ */
+ @Test
+ public void differentSubGraphDepthTest2() {
+
+ // this call will load into the session cache the graph and update the objects in the sub-graph for a
+ // polytomous key
+ // |- root : polytomous key node
+ // |- question : KeyStatement
+ // |- statement : KeyStatement
+ PolytomousKey pkey1 = CdmBase.deproxy(polytomousKeyService.load(polytomousKeyUuid, PKEY_DEPTH2_INIT_STRATEGY),PolytomousKey.class);
+ KeyStatement ks1 = pkey1.getRoot().getStatement();
+ Assert.assertSame(cacher.getFromCache(pkey1.getRoot().getStatement()), pkey1.getRoot().getStatement());
+ CdmTransientEntityCacher cacher = getCacher(sessionOwner);
+
+ // this call will load into the session cache the graph and update the objects in the sub-graph for a
+ // polytomous key
+ // |- root : polytomous key node
+ PolytomousKey pkey2 = CdmBase.deproxy(polytomousKeyService.load(polytomousKeyUuid, PKEY_DEPTH1_INIT_STRATEGY),PolytomousKey.class);
+
+ Assert.assertSame(pkey1.getRoot().getStatement(), pkey2.getRoot().getStatement());
+ pkey2.getRoot().getStatement().getCreatedBy();
+ Assert.assertSame(cacher.getFromCache(ks1), cacher.getFromCache(pkey2.getRoot().getStatement()));
+ }
+
+ /**
+ * when : retrieving objects using (first) recursive load directly and (second) lazy loading in the same session
+ * then : the objects in the sub-graph having the same persistence id should be the same
+ */
+ @Test
+ public void recursiveLoadAndLazyLoadTest() {
+
+ // this call will load into the session cache the graph and update the objects in the sub-graph for a
+ // polytomous key
+ // |- root : polytomous key node
+ // |- question : KeyStatement
+ // |- statement : KeyStatement
+ PolytomousKey pkey1 = CdmBase.deproxy(polytomousKeyService.load(polytomousKeyUuid, PKEY_DEPTH2_INIT_STRATEGY),PolytomousKey.class);
+
+
+ CdmTransientEntityCacher cacher = getCacher(sessionOwner);
+
+ // checking that the root is not null and
+ // that it exists in the cache and
+ // that both the original object and the
+ // cached object are the same
+ Assert.assertNotNull(pkey1.getRoot().getStatement());
+ Assert.assertNotNull(cacher.getFromCache(pkey1.getRoot().getStatement()));
+
+ // this call will load into the session cache the graph and update the objects in the sub-graph for a
+ // polytomous key
+ // |- root : polytomous key node
+ PolytomousKey pkey2 = CdmBase.deproxy(polytomousKeyService.find(polytomousKeyUuid),PolytomousKey.class);
+
+ KeyStatement ks2 = CdmBase.deproxy(pkey2.getRoot().getStatement(), KeyStatement.class);
+ Assert.assertSame(ks2, cacher.getFromCache(pkey2.getRoot().getStatement()));
+
+ Assert.assertSame(pkey1.getRoot().getStatement(), pkey2.getRoot().getStatement());
+ Assert.assertSame(cacher.getFromCache(pkey1.getRoot().getStatement()), cacher.getFromCache(pkey2.getRoot().getStatement()));
+ }
+
+ /**
+ * when : retrieving objects using (first) lazy loading and (second) recursive load directly in the same session
+ * then : the objects in the sub-graph having the same persistence id should be the same
+ */
+ @Test
+ public void lazyLoadAndRecursiveLoadTest() {
+
+
+ // this call will load into the session cache the graph and update the objects in the sub-graph for a
+ // polytomous key
+ // |- root : polytomous key node
+
+ PolytomousKey pkey1 = CdmBase.deproxy(polytomousKeyService.find(polytomousKeyUuid),PolytomousKey.class);
+
+
+ // lazy initialising root.statement
+ KeyStatement st = CdmBase.deproxy(pkey1.getRoot().getStatement(), KeyStatement.class);
+ st.getLabel();
+
+ // checking that the root is not null and
+ // that it exists in the cache and
+ // that both the original object and the
+ // cached object are the same
+ Assert.assertNotNull(pkey1.getRoot().getStatement());
+ Assert.assertSame(CdmBase.deproxy(pkey1.getRoot().getStatement(), KeyStatement.class),
+ cacher.getFromCache(pkey1.getRoot().getStatement(), KeyStatement.class));
+
+ // this call will load into the session cache the graph and update the objects in the sub-graph for a
+ // polytomous key
+ // |- root : polytomous key node
+ // |- question : KeyStatement
+ // |- statement : KeyStatement
+
+ PolytomousKey pkey2 = CdmBase.deproxy(polytomousKeyService.load(polytomousKeyUuid, PKEY_DEPTH2_INIT_STRATEGY),PolytomousKey.class);
+
+
+ Assert.assertSame(pkey2.getRoot().getStatement(), cacher.getFromCache(pkey2.getRoot().getStatement(), KeyStatement.class));
+ Assert.assertSame(st, pkey2.getRoot().getStatement());
+ Assert.assertSame(cacher.getFromCache(st), cacher.getFromCache(pkey2.getRoot().getStatement(), KeyStatement.class));
+ }
+
+
+
+
+
+ /**
+ * when : loading an object (first) and then (second) loading a graph the object is contained in, in the same session
+ * then : the object should be the same
+ */
+ @Test
+ public void subGraphObjectLoadTest1() {
+
+ // this call will load into the session cache a polytomous key node object
+ PolytomousKeyNode rootPKNode = CdmBase.deproxy(polytomousKeyNodeService.find(polytomousKeyNodeUuid1),PolytomousKeyNode.class);
+
+
+ Assert.assertNotNull(rootPKNode);
+ Assert.assertSame(rootPKNode, cacher.getFromCache(rootPKNode));
+
+ PolytomousKeyNode childOfRootPKNode = CdmBase.deproxy(polytomousKeyNodeService.find(polytomousKeyNodeUuid2),PolytomousKeyNode.class);
+
+
+ Assert.assertNotNull(childOfRootPKNode);
+ Assert.assertSame(childOfRootPKNode, cacher.getFromCache(childOfRootPKNode));
+
+ // this call will load into the session cache the graph and update the objects in the sub-graph for a
+ // polytomous key
+ // |- root : polytomous key node
+ // |- question : KeyStatement
+ // |- statement : KeyStatement
+
+ PolytomousKey pkey = CdmBase.deproxy(polytomousKeyService.load(polytomousKeyUuid, PKEY_DEPTH2_INIT_STRATEGY),PolytomousKey.class);
+
+
+ Assert.assertSame(childOfRootPKNode, cacher.getFromCache(childOfRootPKNode));
+ Assert.assertSame(pkey.getRoot().getChildAt(1), childOfRootPKNode);
+ }
+
+ /**
+ * when : loading a graph (first) and then (second) loading an object contained in in the graph, in the same session
+ * then : the object should be the same
+ */
+ @Test
+ public void subGraphObjectLoadTest2() {
+
+ // this call will load into the session cache the graph and update the objects in the sub-graph for a
+ // polytomous key
+ // |- root : polytomous key node
+ // |- question : KeyStatement
+ // |- statement : KeyStatement
+
+ PolytomousKey pkey = CdmBase.deproxy(polytomousKeyService.load(polytomousKeyUuid, PKEY_DEPTH2_INIT_STRATEGY),PolytomousKey.class);
+
+
+ // this call will load into the session cache a polytomous key node object
+ PolytomousKeyNode rootPKNode = CdmBase.deproxy(polytomousKeyNodeService.find(polytomousKeyNodeUuid1),PolytomousKeyNode.class);
+
+
+ Assert.assertNotNull(rootPKNode);
+ Assert.assertSame(rootPKNode, cacher.getFromCache(rootPKNode));
+
+ PolytomousKeyNode childOfRootPKNode = CdmBase.deproxy(polytomousKeyNodeService.find(polytomousKeyNodeUuid2),PolytomousKeyNode.class);
+
+
+ Assert.assertNotNull(childOfRootPKNode);
+ Assert.assertSame(childOfRootPKNode, cacher.getFromCache(childOfRootPKNode));
+
+ Assert.assertSame(childOfRootPKNode, cacher.getFromCache(childOfRootPKNode));
+ Assert.assertSame(pkey.getRoot().getChildAt(1), childOfRootPKNode);
+ }
+
+
+ /**
+ * when : loading objects from a collection
+ * then : the object stored in the cache should be the same
+ */
+ @Test
+ public void subGraphCollectionLoadTest() {
+
+ // this call will load into the session cache the graph and update the objects in the sub-graph for a
+ // polytomous key
+ // |- root : polytomous key node
+ // |- question : KeyStatement
+ // |- statement : KeyStatement
+
+ PolytomousKey pkey = CdmBase.deproxy(polytomousKeyService.load(polytomousKeyUuid, PKEY_DEPTH2_INIT_STRATEGY),PolytomousKey.class);
+
+
+ PolytomousKeyNode childOfRootPKNode = pkey.getRoot().getChildAt(1);
+
+ Assert.assertSame(childOfRootPKNode, cacher.getFromCache(childOfRootPKNode));
+ Assert.assertSame(pkey.getRoot().getChildAt(1), childOfRootPKNode);
+
+ }
+
+ /**
+ * when : loading a non-lazy collection in a subgraph and loading the collection directly
+ * then : the object stored in the cache should be the same as the object in the sub-graph collection and
+ * the object in the directly loaded collection
+ */
+ @Test
+ public void nonLazyCollectionLoadTest() {
+ // need to find an example of this
+ }
+
+ /**
+ * when : loading objects from a map
+ * then : the object stored in the cache should be the same
+ */
+ @Test
+ public void subGraphMapLoadTest() {
+
+ Language english = Language.getLanguageFromUuid(Language.uuidEnglish);
+ Language hindi = Language.getLanguageFromUuid(UUID.fromString("0a1d9d1d-135d-4575-b172-669b51673c39"));
+
+
+ // this call will load into the session cache the graph and update the objects in the sub-graph for a
+ // polytomous key
+ // |- root : polytomous key node
+ // |- question : KeyStatement
+ // |- statement : KeyStatement
+
+ PolytomousKey pkey = CdmBase.deproxy(polytomousKeyService.load(polytomousKeyUuid, PKEY_DEPTH3_INIT_STRATEGY),PolytomousKey.class);
+
+
+ Map<Language, LanguageString> labelMap = pkey.getRoot().getStatement().getLabel();
+ Set<Language> languages = labelMap.keySet();
+ Iterator<Language> languagesItr = languages.iterator();
+ while(languagesItr.hasNext()) {
+ Language lang = languagesItr.next();
+ if(lang.equals(english)) {
+ Assert.assertSame(lang, english);
+ }
+ if(lang.equals(hindi)) {
+ Assert.assertSame(lang, hindi);
+ }
+ Assert.assertSame(lang, cacher.getFromCache(lang));
+ }
+ }
+
+ /**
+ * when : loading a non-lazy map in a subgraph and loading the map directly
+ * then : the object stored in the cache should be the same as the object in the sub-graph map and
+ * the object in the directly loaded map
+ */
+ @Test
+ public void nonLazyMapLoadTest() {
+ // need to find an example of this
+ }
+
+
+
+}
package eu.etaxonomy.taxeditor.application.menu.general;\r
\r
import org.eclipse.swtbot.eclipse.finder.waits.Conditions;\r
+import org.junit.Ignore;\r
import org.junit.Test;\r
\r
import eu.etaxonomy.taxeditor.test.AbstractEditorTest;\r
\r
/**\r
* Open all "General -> New" menus\r
- * \r
+ *\r
* @author n.hoffmann\r
*\r
*/\r
+@Ignore\r
public class NewMenuTest extends AbstractEditorTest {\r
\r
@Test\r
openNewWizardFor("Taxon");\r
utils.cancel();\r
}\r
- \r
+\r
\r
@Test\r
public void canOpenNewWizardForReference(){\r
openNewWizardFor("Reference");\r
utils.cancel();\r
}\r
- \r
- \r
+\r
+\r
@Test\r
public void canOpenNewWizardForName(){\r
openNewWizardFor("Name");\r
utils.cancel();\r
}\r
- \r
- \r
+\r
+\r
@Test\r
public void canOpenNewWizardForTeam(){\r
openNewWizardFor("Team");\r
utils.cancel();\r
}\r
- \r
- \r
+\r
+\r
@Test\r
public void canOpenNewWizardForPerson(){\r
openNewWizardFor("Person");\r
utils.cancel();\r
}\r
- \r
+\r
@Test\r
public void canOpenNewWizardForSpecimen(){\r
openNewWizardFor("Specimen");\r
utils.cancel();\r
}\r
- \r
- \r
+\r
+\r
@Test\r
public void canOpenNewWizardForClassification(){\r
openNewWizardFor("Classification");\r
--- /dev/null
+/**
+ * Copyright (C) 2014 EDIT
+ * European Distributed Institute of Taxonomy
+ * http://www.e-taxonomy.eu
+ *
+ * The contents of this file are subject to the Mozilla Public License Version 1.1
+ * See LICENSE.TXT at the top of this package for the full license terms.
+ */
+package eu.etaxonomy.taxeditor.httpinvoker;
+
+import java.io.File;
+import java.io.FileInputStream;
+import java.io.InputStream;
+import java.lang.reflect.Field;
+import java.net.URL;
+import java.util.Map;
+import java.util.Properties;
+
+import net.sf.ehcache.CacheManager;
+
+import org.apache.log4j.Logger;
+import org.eclipse.core.runtime.FileLocator;
+import org.eclipse.core.runtime.Platform;
+import org.junit.Assert;
+import org.junit.BeforeClass;
+import org.osgi.framework.Bundle;
+import org.springframework.core.io.ClassPathResource;
+import org.springframework.core.io.Resource;
+import org.springframework.security.authentication.UsernamePasswordAuthenticationToken;
+import org.springframework.security.core.Authentication;
+import org.springframework.security.core.context.SecurityContextHolder;
+import org.springframework.security.core.context.SecurityContextImpl;
+import org.unitils.UnitilsJUnit4;
+import org.unitils.database.DatabaseUnitils;
+import org.unitils.database.annotations.Transactional;
+import org.unitils.database.util.TransactionMode;
+import org.unitils.spring.annotation.SpringApplicationContext;
+
+import eu.etaxonomy.cdm.api.application.CdmApplicationRemoteController;
+import eu.etaxonomy.cdm.api.application.CdmApplicationState;
+import eu.etaxonomy.cdm.api.application.CdmDataChangeService;
+import eu.etaxonomy.cdm.api.cache.CdmServiceCacher;
+import eu.etaxonomy.cdm.model.name.NomenclaturalCode;
+import eu.etaxonomy.taxeditor.remoting.cache.CdmRemoteCacheManager;
+import eu.etaxonomy.taxeditor.remoting.cache.CdmTransientEntityCacher;
+import eu.etaxonomy.taxeditor.remoting.source.CdmPersistentRemoteSource;
+import eu.etaxonomy.taxeditor.remoting.source.CdmRemoteSource;
+import eu.etaxonomy.taxeditor.remoting.source.CdmRemoteSourceException;
+import eu.etaxonomy.taxeditor.remoting.source.ICdmRemoteSource;
+import eu.etaxonomy.taxeditor.session.CdmEntitySession;
+import eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled;
+import eu.etaxonomy.taxeditor.session.ICdmEntitySessionManager;
+
+
+/**
+ * Base class for remoting tests, responsible for
+ * - starting / stop the cdm server
+ * - running some basic connection tests
+ * - setting up the remote configuration.
+ *
+ */
+@Transactional(TransactionMode.DISABLED)
+@SpringApplicationContext("file:./target/classes/eu/etaxonomy/cdm/testRemotingApplicationContext.xml")
+public abstract class BaseRemotingTest extends UnitilsJUnit4 {
+ private static final Logger logger = Logger.getLogger(BaseRemotingTest.class);
+
+
+ public static final Resource SERVER_PROPERTIES_FILE =
+ new ClassPathResource("server.properties");
+
+ private static ICdmRemoteSource cdmRemoteSource;
+ private static CdmPersistentRemoteSource remotePersistentSource;
+
+ public static boolean useManagedServer = true;
+
+
+ protected static ICdmEntitySessionManager cdmEntitySessionManager;
+
+ private final static String DEFAULT_USER = "admin";
+ private final static String DEFAULT_PASSWORD = "00000";
+
+ private static String userHomeKey = "user.home";
+
+ private static String user = DEFAULT_USER;
+ private static String password = DEFAULT_PASSWORD;
+
+ protected static CDMServer cdmServer;
+
+ @BeforeClass
+ public static void initializeBaseRemotingTest() {
+
+ DatabaseUnitils.disableConstraints();
+
+ try {
+ String userHomeDirPath;
+ Bundle bundle = Platform.getBundle("eu.etaxonomy.taxeditor.test");
+
+ URL userHomeDirURL = bundle.getEntry("src/test/resources");
+ File userHomeDir = new File(FileLocator.resolve(userHomeDirURL).toURI());
+ userHomeDirPath = userHomeDir.getAbsolutePath();
+
+ URL serverPropertiesURL = bundle.getEntry("src/test/resources/server.properties");
+ File serverPropertiesFile = new File(FileLocator.resolve(serverPropertiesURL).toURI());
+ InputStream inputStream = new FileInputStream(serverPropertiesFile);
+
+ Properties prop = new Properties();
+ if (inputStream != null) {
+ prop.load(inputStream);
+ inputStream.close();
+ }
+
+ logger.info("Setting user.home to " + userHomeDirPath);
+ System.setProperty(userHomeKey, userHomeDirPath);
+
+
+ cdmServer = new CDMServer("cdmTest", serverPropertiesURL);
+
+
+ if(prop.getProperty("user") != null) {
+ user = prop.getProperty("user");
+ }
+
+ if(prop.getProperty("password") != null) {
+ password = prop.getProperty("password");
+ }
+
+ initializeController(cdmServer.getName(),
+ cdmServer.getHost(),
+ cdmServer.getPort(),
+ cdmServer.getContextPath(),
+ NomenclaturalCode.ICNAFP,
+ user,
+ password);
+ } catch (Exception e) {
+ e.printStackTrace();
+ // Assert.fail("Server failed to start. Reason : " + e.getMessage());
+ }
+
+ logger.info("Emptying all caches (except model cache) ");
+ //emptyAllCachesExceptModelCache();
+ }
+
+ public static void emptyAllCachesExceptModelCache() {
+ CacheManager cm = CacheManager.create();
+ String[] cacheNames = CacheManager.create().getCacheNames();
+ for(String cacheName : cacheNames) {
+ if(!cacheName.equals(CdmRemoteCacheManager.CDM_MODEL_CACHE_NAME)) {
+ cm.removeCache(cacheName);
+ }
+ }
+ }
+
+
+ public static void initializeController(String sourceName, String host, int port, String contextPath, NomenclaturalCode ncode, String username, String password) {
+
+ if(CdmApplicationState.getCurrentAppConfig() != null) {
+ return;
+ }
+ cdmRemoteSource = CdmRemoteSource.NewInstance(sourceName, host, port, contextPath, ncode);
+ CdmApplicationRemoteController remoteApplicationController =
+ CdmApplicationRemoteController.NewInstance(cdmRemoteSource,
+ null,
+ null);
+ CdmApplicationState.setCurrentAppConfig(remoteApplicationController);
+ CdmApplicationState.setCdmServiceCacher(new CdmServiceCacher());
+ try {
+ remotePersistentSource = CdmPersistentRemoteSource.NewInstance(sourceName);
+ } catch (CdmRemoteSourceException e) {
+ Assert.fail("Default Remote Persistent Source failed to load. Reason : " + e.getMessage());
+ }
+ cdmEntitySessionManager = getRemoteApplicationController().getCdmEntitySessionManager();
+
+ CdmApplicationState.setCurrentDataChangeService(new CdmDataChangeService());
+
+ //FIXME:Remoting the authentication code should be replaced by a method call which actually
+ // does the authentication in the editor code so that the 'real' authentication can be tested
+ SecurityContextHolder.clearContext();
+ SecurityContextImpl sc = new SecurityContextImpl();
+ Authentication token = new UsernamePasswordAuthenticationToken(username,password);
+ Authentication authentication = getRemoteApplicationController().getAuthenticationManager().authenticate(token);
+ authentication = new UsernamePasswordAuthenticationToken(username,password, authentication.getAuthorities());
+ sc.setAuthentication(authentication);
+
+ SecurityContextHolder.setContext(sc);
+ CdmApplicationState.setCurrentSecurityContext(SecurityContextHolder.getContext());
+ }
+
+
+
+ protected static CdmApplicationRemoteController getRemoteApplicationController() {
+ return (CdmApplicationRemoteController) CdmApplicationState.getCurrentAppConfig();
+ }
+
+ protected static ICdmRemoteSource getCdmRemoteSource() {
+ return cdmRemoteSource;
+ }
+
+ protected static CdmPersistentRemoteSource getCdmPersistentRemoteSource() {
+ return remotePersistentSource;
+ }
+
+ protected static ICdmEntitySessionManager getCdmEntitySessionManager() {
+ return cdmEntitySessionManager;
+ }
+
+
+ protected static CdmEntitySession getSession(ICdmEntitySessionEnabled sessionOwner) {
+ Map<ICdmEntitySessionEnabled, CdmEntitySession> ownerSessionMap =
+ (Map<ICdmEntitySessionEnabled, CdmEntitySession>) getFieldValueViaReflection(cdmEntitySessionManager, "ownerSessionMap");
+ return ownerSessionMap.get(sessionOwner);
+ }
+
+ protected static CdmEntitySession getActiveSession() {
+ return (CdmEntitySession) getFieldValueViaReflection(cdmEntitySessionManager, "activeSession");
+ }
+
+ protected static CdmTransientEntityCacher getCacher(ICdmEntitySessionEnabled sessionOwner) {
+ return (CdmTransientEntityCacher) getFieldValueViaReflection(getSession(sessionOwner), "cdmTransientEntityCacher");
+ }
+
+
+ protected static Object getFieldValueViaReflection(Object object, String fieldName) {
+ Class<?> clazz = object.getClass();
+ try {
+ Field field = clazz.getDeclaredField(fieldName);
+ field.setAccessible(true);
+ return field.get(object);
+ } catch (NoSuchFieldException e) {
+ e.printStackTrace();
+ } catch (SecurityException e) {
+ e.printStackTrace();
+ } catch (IllegalArgumentException e) {
+ e.printStackTrace();
+ } catch (IllegalAccessException e) {
+ e.printStackTrace();
+ }
+ return null;
+ }
+
+
+
+
+}
--- /dev/null
+// $Id$
+/**
+ * Copyright (C) 2014 EDIT
+ * European Distributed Institute of Taxonomy
+ * http://www.e-taxonomy.eu
+ *
+ * The contents of this file are subject to the Mozilla Public License Version 1.1
+ * See LICENSE.TXT at the top of this package for the full license terms.
+ */
+package eu.etaxonomy.taxeditor.httpinvoker;
+
+import java.io.BufferedReader;
+import java.io.File;
+import java.io.FileInputStream;
+import java.io.FileNotFoundException;
+import java.io.IOException;
+import java.io.InputStream;
+import java.io.InputStreamReader;
+import java.net.URISyntaxException;
+import java.net.URL;
+import java.util.Properties;
+
+import javax.management.InstanceNotFoundException;
+import javax.management.MBeanException;
+import javax.management.MBeanServerConnection;
+import javax.management.MalformedObjectNameException;
+import javax.management.ObjectName;
+import javax.management.ReflectionException;
+import javax.management.remote.JMXConnector;
+import javax.management.remote.JMXConnectorFactory;
+import javax.management.remote.JMXServiceURL;
+import javax.sql.DataSource;
+
+import org.apache.log4j.Logger;
+import org.eclipse.core.runtime.FileLocator;
+import org.springframework.core.io.ClassPathResource;
+import org.springframework.core.io.Resource;
+import org.unitils.database.annotations.TestDataSource;
+
+import eu.etaxonomy.cdm.database.CdmPersistentDataSource;
+import eu.etaxonomy.cdm.database.ICdmDataSource;
+import eu.etaxonomy.taxeditor.remoting.server.CDMServerException;
+import eu.etaxonomy.taxeditor.remoting.source.CdmRemoteSourceBase;
+
+/**
+ *
+ * (Singleton) Server instance which manages a compatible cdmlib-webapp-war.
+ * This is done by launching a jetty instance (using jetty-runner) as an
+ * executed process. The choice of the external process over a more
+ * preferable 'embedded jetty' instance is due to problems arising from the
+ * class loading of classes (e.g. from hibernate core) which are needed
+ * for both the webapp as well as the remoting client.
+ *
+ * @author cmathew
+ * @date 23 Sep 2014
+ *
+ */
+
+public class CDMServer {
+
+ public static final Logger logger = Logger.getLogger(CDMServer.class);
+
+ @TestDataSource
+ protected DataSource dataSource;
+
+ private final String name = "default";
+ private final String host = "127.0.0.1";
+ private int httpPort = 9090;
+ private int stopPort = 9191;
+ private String stopKey = "jetty-cdm-server";
+ private final String contextPath = "";
+
+ public static final Resource DEFAULT_CDM_WEBAPP_RESOURCE =
+ new ClassPathResource("/etc/jetty/cdmlib-remote-webapp.war");
+
+ public static final Resource DEFAULT_DATASOURCE_FILE =
+ new ClassPathResource("datasources.xml");
+
+ public static final Resource DEFAULT_JETTY_RUNNER_RESOURCE =
+ new ClassPathResource("/etc/jetty/jetty-runner-9.2.3.v20140905.jar");
+
+ public static final Resource DEFAULT_JETTY_RESOURCE =
+ new ClassPathResource("/etc/jetty/start-9.2.3.v20140905.jar");
+
+ private static CDMServer cdmServer = null;
+ private static CDMServerException cdmse = null;
+
+ private boolean serverAlreadyRunning = false;
+
+ private File dataSourcesFile;
+ private final String dataSourceName;
+
+ public CDMServer(String dataSourceName, URL serverPropertiesURL) throws CDMServerException {
+ this.dataSourceName = dataSourceName;
+ Properties prop = new Properties();
+
+ try {
+ File serverPropertiesFile = new File(FileLocator.resolve(serverPropertiesURL).toURI());
+ InputStream inputStream = new FileInputStream(serverPropertiesFile);
+
+ prop.load(inputStream);
+ inputStream.close();
+
+ } catch (FileNotFoundException e) {
+ throw new CDMServerException(e);
+ } catch (URISyntaxException e) {
+ throw new CDMServerException(e);
+ } catch (IOException e) {
+ throw new CDMServerException(e);
+ }
+
+
+
+ if(prop.getProperty("httpPort") != null) {
+ setHttpPort(Integer.valueOf(prop.getProperty("httpPort")));
+ }
+
+ if(prop.getProperty("stopPort") != null) {
+ setStopPort(Integer.valueOf(prop.getProperty("stopPort")));
+ }
+
+ if(prop.getProperty("stopKey") != null) {
+ setStopKey(prop.getProperty("stopKey"));
+ }
+
+ }
+
+
+
+ public String getName() {
+ return name;
+ }
+
+ public String getHost() {
+ return host;
+ }
+
+ public int getPort() {
+ return httpPort;
+ }
+
+ public String getContextPath() {
+ return contextPath;
+ }
+
+ public void setHttpPort(int port) {
+ this.httpPort = port;
+ }
+
+ public void setStopPort(int stopPort) {
+ this.stopPort = stopPort;
+ }
+
+ public void setStopKey(String stopKey) {
+ this.stopKey = stopKey;
+ }
+
+
+ public static boolean isRunningInEclipse() {
+ return (System.getProperty("sun.java.command") != null &&
+ System.getProperty("sun.java.command").startsWith("org.eclipse.jdt.internal.junit.runner.RemoteTestRunner"));
+ }
+
+ private String getVMArgs() throws IOException {
+ StringBuilder sb = new StringBuilder();
+ sb.append(" -Dspring.profiles.active=remoting");
+ sb.append(" -Dcdm.beanDefinitionFile=" + DEFAULT_DATASOURCE_FILE.getFile().getAbsolutePath());
+ sb.append(" -Dcdm.datasource=cdmTest");
+ return sb.toString();
+ }
+
+ private String getStartServerArgs() throws IOException {
+ StringBuilder sb = new StringBuilder();
+ sb.append(" --port " + httpPort);
+ return sb.toString();
+ }
+
+ private String getStopServerSettings() {
+ StringBuilder sb = new StringBuilder();
+ sb.append(" --stop-port ");
+ sb.append(stopPort);
+ sb.append(" --stop-key ");
+ sb.append(stopKey);
+ return sb.toString();
+ }
+
+ private String getStopServerArgs() {
+ StringBuilder sb = new StringBuilder();
+ sb.append(" STOP.PORT=");
+ sb.append(stopPort);
+ sb.append(" STOP.KEY=");
+ sb.append(stopKey);
+ return sb.toString();
+ }
+
+
+ public void start() throws CDMServerException {
+
+ /**
+ * First check if the CDM server responds to a service request, which implies that
+ * the server has started properly. If no response is received then check if the
+ * server is listening on specific host / port, which implies that the server
+ * has started but incorrectly, in which case we try to force stop it (if we can)
+ * and start a new server.
+ */
+ if(isStarted(1)) {
+ logger.info("[CDM-Server] Server already running @ " + host + ":" + httpPort );
+ serverAlreadyRunning = true;
+ return;
+ }
+
+ Thread t = new Thread() {
+ @Override
+ public void run() {
+
+ StringBuffer output = new StringBuffer();
+ try{
+ Process p;
+ String command = "java "
+ + getVMArgs()
+ + " -jar "
+ + DEFAULT_JETTY_RUNNER_RESOURCE.getFile().getAbsolutePath()
+ + getStartServerArgs()
+ + getStopServerSettings()
+ + " "
+ + DEFAULT_CDM_WEBAPP_RESOURCE.getFile().getAbsolutePath();
+ logger.info("[CDM-Server] Starting server with Command : " + command);
+ p = Runtime.getRuntime().exec(command);
+
+ BufferedReader inpReader =
+ new BufferedReader(new InputStreamReader(p.getInputStream()));
+
+ BufferedReader errReader =
+ new BufferedReader(new InputStreamReader(p.getErrorStream()));
+
+ String line = "";
+ while ((line = inpReader.readLine())!= null) {
+ logger.info("[CDM-Server Start] : " + line);
+ }
+
+ while ((line = errReader.readLine())!= null) {
+ logger.info("[CDM-Server Start] : " + line);
+ }
+
+ } catch (Exception e) {
+ e.printStackTrace();
+ cdmse = new CDMServerException(e);
+ }
+ }
+ };
+
+ t.setDaemon(true);
+ cdmse = null;
+ t.start();
+
+ if(isStarted(50)) {
+ logger.info("[CDM-Server] Server running @ " + host + ":" + httpPort );
+ } else {
+ logger.info("[CDM-Server] Server not started within given interval");
+ // making sure to kill server if it is not started correctly
+ try {
+ stop(true);
+ } catch (Exception e) {
+ throw new CDMServerException("CDM Server could not be stopped : " + e.getMessage());
+ }
+ throw new CDMServerException("CDM Server not started : ");
+ }
+
+ }
+
+
+ public boolean isStarted(int checkingIntervals) throws CDMServerException {
+ CdmRemoteSourceBase crsb = new CdmRemoteSourceBase("local-cdm-server",
+ host,
+ httpPort,
+ contextPath,
+ null);
+ int intervalsCount = 0;
+ do {
+ try {
+ if(cdmse != null) {
+ return false;
+ }
+ boolean check = crsb.checkConnection();
+ if(check) {
+ logger.info("[CDM-Server] Running @ " + host + ":" + httpPort );
+ return true;
+ }
+ } catch (Exception e) {
+
+ }
+ try {
+ Thread.sleep(1000);
+ } catch (InterruptedException ie) {
+ throw new CDMServerException("Error checking CDM Server status", ie);
+ }
+ intervalsCount++;
+ } while (intervalsCount < checkingIntervals);
+ return false;
+ }
+
+ public void stop() throws Exception {
+ stop(false);
+ }
+
+ public void stop(boolean force) throws Exception {
+
+ if(!force) {
+ if(!cdmServer.isStarted(1)) {
+ logger.info("[CDM-Server] Server already stopped @ " + host + ":" + httpPort );
+ return;
+ }
+ }
+
+ if(serverAlreadyRunning) {
+ return;
+ }
+ Thread t = new Thread() {
+ @Override
+ public void run() {
+ StringBuffer output = new StringBuffer();
+ try{
+ Process p;
+ String command = "java -jar " + DEFAULT_JETTY_RESOURCE.getFile().getAbsolutePath()
+ + getStopServerArgs() + " --stop ";
+ logger.info("[CDM-Server] Stop Command : " + command);
+ p = Runtime.getRuntime().exec(command);
+
+ BufferedReader inpReader =
+ new BufferedReader(new InputStreamReader(p.getInputStream()));
+
+ BufferedReader errReader =
+ new BufferedReader(new InputStreamReader(p.getErrorStream()));
+
+ String line = "";
+ while ((line = inpReader.readLine())!= null) {
+ logger.info("[CDM-Server Stop] : " + line);
+ }
+
+ while ((line = errReader.readLine())!= null) {
+ logger.info("[CDM-Server Stop] : " + line);
+ }
+ logger.info("CDM-Server Stopped : ");
+ } catch (Exception e) {
+ logger.info("[CDM-Server] Could not stop @ " + host + ":" + httpPort + ". Please kill it manually");
+
+ }
+
+ }
+ };
+
+ t.setDaemon(true);
+ t.start();
+
+ }
+
+ public static void stopServerViaJMX(int jmxPort) throws CDMServerException {
+ String JMX_URL = "service:jmx:rmi:///jndi/rmi://localhost:" + jmxPort + "/jmxrmi";
+ logger.warn("Shutting down Jetty instance ... ");
+
+ try {
+ JMXConnector connector = JMXConnectorFactory.connect(new JMXServiceURL(JMX_URL), null);
+ connector.connect(null);
+ MBeanServerConnection connection = connector.getMBeanServerConnection();
+ ObjectName objectName = new ObjectName("org.eclipse.jetty.server:type=server,id=0");
+ connection.invoke(objectName, "stop", null, null);
+ logger.warn("Shutdown command sent");
+ } catch (InstanceNotFoundException e) {
+ throw new CDMServerException(e);
+ } catch (MBeanException e) {
+ throw new CDMServerException(e);
+ } catch (ReflectionException e) {
+ throw new CDMServerException(e);
+ } catch (IOException e) {
+ throw new CDMServerException(e);
+ } catch (MalformedObjectNameException e) {
+ throw new CDMServerException(e);
+ }
+ }
+
+ public void convertEditorToServerConfig() {
+ String xmlString = "<?xml version=\"1.0\" encoding=\"UTF-8\"?> " + System.lineSeparator() +
+ "<beans xmlns=\"http://www.springframework.org/schema/beans\"" + System.lineSeparator() +
+ "xmlns:xsi=\"http://www.w3.org/2001/XMLSchema-instance\"" + System.lineSeparator() +
+ "xmlns:tx=\"http://www.springframework.org/schema/tx\"" + System.lineSeparator() +
+ "xmlns:context=\"http://www.springframework.org/schema/context\"" + System.lineSeparator() +
+ "xsi:schemaLocation=\"http://www.springframework.org/schema/beans http://www.springframework.org/schema/beans/spring-beans-2.5.xsd" + System.lineSeparator() +
+ "http://www.springframework.org/schema/context http://www.springframework.org/schema/context/spring-context-2.5.xsd" + System.lineSeparator() +
+ "http://www.springframework.org/schema/tx http://www.springframework.org/schema/tx/spring-tx-2.5.xsd" + System.lineSeparator() +
+ ">" + System.lineSeparator() +
+ "<bean id=\"dataSourceProperties\" class=\"eu.etaxonomy.cdm.remote.config.DataSourceProperties\">" + System.lineSeparator() +
+ " <property name=\"propsMap\">" + System.lineSeparator() +
+ " <map/>" + System.lineSeparator() +
+ " </property>" + System.lineSeparator() +
+ "</bean>";
+
+ for(ICdmDataSource dataSource : CdmPersistentDataSource.getAllDataSources()) {
+
+ }
+ }
+}
--- /dev/null
+/**
+ * Copyright (C) 2014 EDIT
+ * European Distributed Institute of Taxonomy
+ * http://www.e-taxonomy.eu
+ *
+ * The contents of this file are subject to the Mozilla Public License Version 1.1
+ * See LICENSE.TXT at the top of this package for the full license terms.
+ */
+package eu.etaxonomy.taxeditor.httpinvoker;
+
+
+import java.util.Map;
+
+import org.apache.log4j.Logger;
+import org.junit.Assert;
+import org.junit.BeforeClass;
+import org.junit.Test;
+
+import eu.etaxonomy.cdm.config.CdmPersistentSourceUtils;
+import eu.etaxonomy.cdm.config.CdmSourceException;
+import eu.etaxonomy.cdm.model.metadata.CdmMetaData.MetaDataPropertyName;
+import eu.etaxonomy.cdm.model.name.NomenclaturalCode;
+import eu.etaxonomy.taxeditor.remoting.source.CdmPersistentRemoteSource;
+import eu.etaxonomy.taxeditor.remoting.source.CdmRemoteSource;
+import eu.etaxonomy.taxeditor.remoting.source.CdmRemoteSourceException;
+import eu.etaxonomy.taxeditor.remoting.source.ICdmRemoteSource;
+
+/**
+ * Class to test the cdm persistent source functionality, including
+ * initialising / saving / updating and deleting
+ *
+ * Corresponding test sources settings can be found at
+ * /src/text/resources/eu.etaxonomy.cdm/cdm.datasources.xml
+ *
+ */
+public class CdmPersistentRemoteSourceTest extends BaseRemotingTest {
+ private static final Logger logger = Logger.getLogger(CdmPersistentRemoteSourceTest.class);
+
+ private CdmPersistentRemoteSource remotePersistentSource;
+
+ @BeforeClass
+ public static void initialize() {
+ }
+
+ @Test
+ public void whenLoadingExistingCompleteRemoteSourceThenLoadIsSuccessful() {
+
+ remotePersistentSource = getCdmPersistentRemoteSource();
+
+ String expectedServer = "127.0.0.1";
+ String expectedPort = "9090";
+ String expectedContextPath = "";
+ logger.info("Default remote source server : " + remotePersistentSource.getServer());
+ Assert.assertTrue("Default server should be " + expectedServer,
+ expectedServer.equals(remotePersistentSource.getServer()));
+
+ logger.info("Default remote source port : " + remotePersistentSource.getPort());
+ Assert.assertTrue("Default port should be 9090",
+ expectedPort.equals(String.valueOf(remotePersistentSource.getPort())));
+
+ logger.info("Default remote source context path : " + remotePersistentSource.getContextPath());
+ Assert.assertTrue("Default remote source context path should be " + expectedContextPath,
+ expectedContextPath.equals(remotePersistentSource.getContextPath()));
+
+ logger.info("Default remote source nomenclatural code : " + remotePersistentSource.getNomenclaturalCode().toString());
+ Assert.assertTrue("Default NomenclaturalCode should be ICNAFP",
+ NomenclaturalCode.ICNAFP.equals(remotePersistentSource.getNomenclaturalCode()));
+ }
+
+
+
+
+ @Test
+ public void whenConnectingToAnActiveServerThenConnectSuccessfully() {
+ // check if active server throws the right exception
+
+ remotePersistentSource = getCdmPersistentRemoteSource();
+
+ String dbSchemaVersion = "";
+ try {
+ dbSchemaVersion = remotePersistentSource.getDbSchemaVersion();
+ } catch (CdmSourceException e) {
+ Assert.fail("getDbSchemaVersion() on active cdm server should not have thrown CdmSourceException");
+ }
+ logger.info("dbSchemaVersion is " + dbSchemaVersion);
+
+
+ boolean isDbEmpty = false;
+ try {
+ isDbEmpty = remotePersistentSource.isDbEmpty();
+ } catch (CdmSourceException e) {
+ Assert.fail("isDbEmpty() on active cdm server should not have thrown CdmSourceException");
+ }
+ Assert.assertFalse(isDbEmpty);
+
+
+ boolean check = false;
+ try {
+ check = remotePersistentSource.checkConnection();
+ } catch (CdmSourceException e) {
+ Assert.fail("checkConnection() on active cdm server should not have thrown CdmSourceException");
+ }
+ Assert.assertTrue(check);
+
+
+ }
+
+ @Test
+ public void whenRequestingMetadatFromRemoteSourceThenMetaDataIsRetrieved() {
+ try {
+ remotePersistentSource = getCdmPersistentRemoteSource();
+ Map<MetaDataPropertyName, String> cdmMetaDataMap = remotePersistentSource.getMetaDataMap();
+ for(MetaDataPropertyName mdpn : cdmMetaDataMap.keySet()) {
+ String value = cdmMetaDataMap.get(mdpn);
+ logger.info("MetaData Property " + mdpn.name() + " has value " + value);
+ Assert.assertNotNull("Meta Data Value for property for " + mdpn.name() + " should not be null", value);
+ }
+ } catch (CdmSourceException e) {
+ // TODO Auto-generated catch block
+ e.printStackTrace();
+ }
+ }
+
+ @Test
+ public void whenLoadingNonExistingRemoteSourceThenThrowException() {
+ try {
+ remotePersistentSource = CdmPersistentRemoteSource.NewInstance("nonExistingSource");
+ Assert.fail("Initialising a non-existing remote source should throw an exception");
+ } catch (CdmRemoteSourceException e) {
+ logger.info(e.getMessage());
+ }
+ }
+
+ @Test
+ public void whenLoadingExistingIncompleteRemoteSourceThenThrowException() {
+ try {
+ remotePersistentSource = CdmPersistentRemoteSource.NewInstance("incomplete");
+ Assert.fail("Initialising an incomplete remote source should throw an exception");
+ } catch (CdmRemoteSourceException e) {
+ //Assert.assertThat(e.getMessage(), containsString("Required property '" + CdmSourceProperties.SERVER.toString() + "' is missing"));
+ }
+ }
+
+ @Test
+ public void whenSavingUpdatingDeletingNewCompleteRemoteSourceThenSaveUpdateDeleteIsSuccessful() {
+ String strRemoteSource = "local";
+ Assert.assertFalse("New remote source '" + strRemoteSource + "' should not yet exist in source settings file",
+ CdmPersistentRemoteSource.exists(strRemoteSource));
+ try {
+ ICdmRemoteSource remoteSource =
+ CdmRemoteSource.NewInstance(strRemoteSource,
+ "127.0.0.1",
+ 8080,
+ "col",
+ NomenclaturalCode.ICNAFP);
+ remotePersistentSource = CdmPersistentRemoteSource.save(strRemoteSource,remoteSource);
+
+ logger.info("Server : " + remotePersistentSource.getServer());
+ Assert.assertTrue("Server value should be equal",
+ remoteSource.getServer().equals(remotePersistentSource.getServer()));
+
+ logger.info("Port : " + remotePersistentSource.getPort());
+ Assert.assertTrue("Port value should be equal",
+ remoteSource.getPort() == remotePersistentSource.getPort());
+
+ logger.info("Context Path : " + remotePersistentSource.getContextPath());
+ Assert.assertTrue("Context Path value should be equal",
+ remoteSource.getContextPath().equals(remotePersistentSource.getContextPath()));
+
+ logger.info("Nomenclatural Code : " + remotePersistentSource.getNomenclaturalCode().name());
+ Assert.assertTrue("Nomenclatural Code value should be equal",
+ remoteSource.getNomenclaturalCode().name().equals(remotePersistentSource.getNomenclaturalCode().name()));
+
+ Assert.assertTrue("New remote source '" + strRemoteSource + "' should be saved in source settings file",
+ CdmPersistentRemoteSource.exists(strRemoteSource));
+
+ remoteSource = CdmRemoteSource.NewInstance(strRemoteSource,
+ "127.0.0.55",
+ 9090,
+ "cyprus",
+ NomenclaturalCode.ICNB);
+ remotePersistentSource = CdmPersistentRemoteSource.update(strRemoteSource,remoteSource);
+
+ logger.info("Server : " + remotePersistentSource.getServer());
+ Assert.assertTrue("Server value should be equal",
+ remoteSource.getServer().equals(remotePersistentSource.getServer()));
+
+ logger.info("Port : " + remotePersistentSource.getPort());
+ Assert.assertTrue("Port value should be equal",
+ remoteSource.getPort() == remotePersistentSource.getPort());
+
+ logger.info("Context Path : " + remotePersistentSource.getContextPath());
+ Assert.assertTrue("Context Path value should be equal",
+ remoteSource.getContextPath().equals(remotePersistentSource.getContextPath()));
+
+ logger.info("Nomenclatural Code : " + remotePersistentSource.getNomenclaturalCode().name());
+ Assert.assertTrue("Nomenclatural Code value should be equal",
+ remoteSource.getNomenclaturalCode().name().equals(remotePersistentSource.getNomenclaturalCode().name()));
+
+ Assert.assertTrue("New remote source '" + strRemoteSource + "' should be saved in source settings file",
+ CdmPersistentRemoteSource.exists(strRemoteSource));
+
+ CdmPersistentSourceUtils.delete(remotePersistentSource);
+
+ Assert.assertFalse("New remote source '" + strRemoteSource + "' should no longer exist in source settings file",
+ CdmPersistentRemoteSource.exists(strRemoteSource));
+
+ } catch (CdmRemoteSourceException e) {
+ Assert.fail("Saving a new complete remote source should not throw an exception");
+ logger.info(e.getMessage());
+ }
+ }
+
+
+
+}
--- /dev/null
+/**
+* Copyright (C) 2014 EDIT
+* European Distributed Institute of Taxonomy
+* http://www.e-taxonomy.eu
+*
+* The contents of this file are subject to the Mozilla Public License Version 1.1
+* See LICENSE.TXT at the top of this package for the full license terms.
+*/
+package eu.etaxonomy.taxeditor.httpinvoker;
+
+import org.apache.log4j.Logger;
+import org.junit.Assert;
+import org.junit.Test;
+import org.springframework.remoting.RemoteAccessException;
+
+import eu.etaxonomy.cdm.config.CdmSourceException;
+import eu.etaxonomy.cdm.model.name.NomenclaturalCode;
+import eu.etaxonomy.taxeditor.lazyloading.RemotePersistentCollectionTest;
+import eu.etaxonomy.taxeditor.remoting.source.CdmRemoteSource;
+
+public class CdmRemoteSourceTest extends BaseRemotingTest {
+ private static final Logger logger = Logger.getLogger(RemotePersistentCollectionTest.class);
+
+
+ @Test
+ public void whenConnectingToInactiveServerThenFailToConnect() {
+
+ // check if non-active server throws the right exception
+ CdmRemoteSource inactiveCrs = CdmRemoteSource.NewInstance(cdmServer.getName(),
+ cdmServer.getHost(),
+ 808080,
+ cdmServer.getContextPath(),
+ NomenclaturalCode.ICNAFP);
+ try {
+ inactiveCrs.getDbSchemaVersion();
+ Assert.fail("getDbSchemaVersion() on inactive cdm server should have thrown RemoteAccessException");
+ } catch(CdmSourceException cse) {
+ Assert.fail("getDbSchemaVersion() on inactive cdm server should have thrown RemoteAccessException and not CdmSourceException");
+ } catch(RemoteAccessException rae){
+
+ }
+
+ try {
+ inactiveCrs.isDbEmpty();
+ Assert.fail("isDbEmpty() on inactive cdm server should have thrown RemoteAccessException");
+ } catch(CdmSourceException cse) {
+ Assert.fail("isDbEmpty() on inactive cdm server should have thrown RemoteAccessException and not CdmSourceException");
+ } catch(RemoteAccessException rae){
+
+ }
+
+ try {
+ inactiveCrs.checkConnection();
+ Assert.fail("checkConnection() on inactive cdm server should have thrown RemoteAccessException");
+ } catch(CdmSourceException cse) {
+ Assert.fail("checkConnection() on inactive cdm server should have thrown RemoteAccessException and not CdmSourceException");
+ } catch(RemoteAccessException rae){
+
+ }
+
+ }
+
+ @Test
+ public void whenConnectingToAnActiveServerWithServicesBlockedThenFailToAccessServices() {
+
+ }
+
+ @Test
+ public void whenConnectingToAnActiveServerThenConnectSuccessfully() {
+ // check if active server throws the right exception
+ CdmRemoteSource activeCrs = CdmRemoteSource.NewInstance(cdmServer.getName(),
+ cdmServer.getHost(),
+ cdmServer.getPort(),
+ cdmServer.getContextPath(),
+ NomenclaturalCode.ICNAFP);
+ String dbSchemaVersion = "";
+ try {
+ dbSchemaVersion = activeCrs.getDbSchemaVersion();
+ } catch (CdmSourceException e) {
+ Assert.fail("getDbSchemaVersion() on active cdm server should not have thrown CdmSourceException");
+ }
+ logger.info("dbSchemaVersion is " + dbSchemaVersion);
+
+
+ boolean isDbEmpty = false;
+ try {
+ isDbEmpty = activeCrs.isDbEmpty();
+ } catch (CdmSourceException e) {
+ Assert.fail("isDbEmpty() on active cdm server should not have thrown CdmSourceException");
+ }
+ Assert.assertFalse(isDbEmpty);
+
+
+ boolean check = true;
+ try {
+ isDbEmpty = activeCrs.checkConnection();
+ } catch (CdmSourceException e) {
+ Assert.fail("checkConnection() on active cdm server should not have thrown CdmSourceException");
+ }
+ Assert.assertTrue(check);
+
+ }
+
+}
--- /dev/null
+// $Id$
+/**
+* Copyright (C) 2014 EDIT
+* European Distributed Institute of Taxonomy
+* http://www.e-taxonomy.eu
+*
+* The contents of this file are subject to the Mozilla Public License Version 1.1
+* See LICENSE.TXT at the top of this package for the full license terms.
+*/
+package eu.etaxonomy.taxeditor.httpinvoker;
+
+import java.net.URL;
+
+import org.apache.log4j.Logger;
+import org.eclipse.core.runtime.Platform;
+import org.junit.Assert;
+import org.junit.Ignore;
+import org.junit.Test;
+import org.osgi.framework.Bundle;
+import org.unitils.UnitilsJUnit4;
+
+import eu.etaxonomy.taxeditor.remoting.server.CDMServerException;
+
+/**
+ * @author cmathew
+ * @date 6 Oct 2014
+ *
+ */
+public class CdmServerTest extends UnitilsJUnit4 {
+ private static final Logger logger = Logger.getLogger(CdmServerTest.class);
+
+ @Ignore // this should be targetting integration or production
+ @Test
+ public void startCdmServer() throws CDMServerException {
+ Bundle bundle = Platform.getBundle("eu.etaxonomy.taxeditor.test");
+ URL serverPropertiesURL = bundle.getEntry("src/test/resources/server.properties");
+ CDMServer cdmServer = new CDMServer("cdmTest", serverPropertiesURL);
+ cdmServer .start();
+ try {
+ cdmServer.stop(true);
+ } catch (Exception e) {
+ e.printStackTrace();
+ Assert.fail("Server could not be stopped. Reason : " + e.getMessage());
+ }
+ }
+
+}
--- /dev/null
+/**
+ * Copyright (C) 2014 EDIT
+ * European Distributed Institute of Taxonomy
+ * http://www.e-taxonomy.eu
+ *
+ * The contents of this file are subject to the Mozilla Public License Version 1.1
+ * See LICENSE.TXT at the top of this package for the full license terms.
+ */
+package eu.etaxonomy.taxeditor.httpinvoker;
+
+import org.apache.log4j.Logger;
+import org.junit.Assert;
+import org.junit.Ignore;
+import org.junit.Test;
+import org.springframework.remoting.RemoteAccessException;
+import org.springframework.security.core.context.SecurityContext;
+import org.springframework.security.core.context.SecurityContextHolder;
+
+import eu.etaxonomy.cdm.api.application.CdmApplicationState;
+import eu.etaxonomy.cdm.api.service.ITestService;
+import eu.etaxonomy.cdm.config.CdmSourceException;
+import eu.etaxonomy.cdm.model.description.PolytomousKey;
+
+/**
+ * Class to test the HttpInvoker services exposed by the CDM Sever
+ *
+ */
+public class HttpInvokerServicesTest extends BaseRemotingTest {
+ private static final Logger logger = Logger.getLogger(HttpInvokerServicesTest.class);
+
+ ITestService testService = getRemoteApplicationController().getTestService();
+
+ @Test
+ public void whenCallingMethodsOnRemoteServicesThenSucceed() {
+ try {
+
+ //getRemoteApplicationController().getDatabaseService();
+ String dbSchemaVersion = getRemoteApplicationController().getDatabaseService().getDbSchemaVersion();
+ logger.info("dbSchemaVersion is " + dbSchemaVersion);
+
+
+ } catch (CdmSourceException e) {
+ Assert.fail("pinging database service on active cdm server should not have thrown CdmSourceException");
+ }
+
+ getRemoteApplicationController().getPolytomousKeyService().list(PolytomousKey.class, null, null, null, null);
+
+ }
+
+ @Ignore
+ @Test
+ public void whenCallingMethodsOnRemoteServicesThenFailIfNotAuthenticated() {
+
+ SecurityContext context = SecurityContextHolder.getContext();
+
+ CdmApplicationState.setCurrentSecurityContext(null);
+ try {
+ getRemoteApplicationController().getPolytomousKeyService().list(PolytomousKey.class, null, null, null, null);
+ Assert.fail("service call should fail as it is not authenticated");
+ }catch (RemoteAccessException rae) {
+
+ }
+
+ CdmApplicationState.setCurrentSecurityContext(context);
+
+ }
+
+ // should be kept at ignore and only used for manual testing
+ // otherwise tests will take too much time
+ @Ignore
+ @Test
+ public void testDisableReadTimeout() throws InterruptedException {
+ testService.waitFor((long) 120000.0);
+ }
+
+}
--- /dev/null
+// $Id$
+/**
+* Copyright (C) 2015 EDIT
+* European Distributed Institute of Taxonomy
+* http://www.e-taxonomy.eu
+*
+* The contents of this file are subject to the Mozilla Public License Version 1.1
+* See LICENSE.TXT at the top of this package for the full license terms.
+*/
+package eu.etaxonomy.taxeditor.httpinvoker;
+
+import org.apache.log4j.Logger;
+import org.junit.After;
+import org.junit.Before;
+
+import eu.etaxonomy.cdm.api.application.CdmApplicationState;
+import eu.etaxonomy.taxeditor.remoting.cache.CdmTransientEntityCacher;
+import eu.etaxonomy.taxeditor.session.ICdmEntitySession;
+import eu.etaxonomy.taxeditor.session.MockSessionOwner;
+
+/**
+ * @author cmathew
+ * @date 12 Jun 2015
+ *
+ */
+public abstract class RemotingSessionAwareTest extends BaseRemotingTest {
+
+ private static final Logger logger = Logger.getLogger(RemotingSessionAwareTest.class);
+
+ protected CdmTransientEntityCacher cacher;
+ protected MockSessionOwner sessionOwner;
+
+
+ @Before
+ public void initializeSession() {
+
+ sessionOwner = new MockSessionOwner();
+ logger.info("created mock session owner : " + sessionOwner);
+ ICdmEntitySession cdmEntitySession = cdmEntitySessionManager.newSession(sessionOwner, true);
+ CdmApplicationState.getCurrentDataChangeService().register(sessionOwner);
+ sessionOwner.setCdmEntitySession(cdmEntitySession);
+ cacher = getCacher(sessionOwner);
+ }
+
+ @After
+ public void postSessionAwareTest() {
+ sessionOwner.dispose();
+ CdmApplicationState.getCurrentDataChangeService().unregister(sessionOwner);
+ logger.info("disposed of mock session owner : " + sessionOwner);
+ }
+}
--- /dev/null
+/**
+ * Copyright (C) 2014 EDIT
+ * European Distributed Institute of Taxonomy
+ * http://www.e-taxonomy.eu
+ *
+ * The contents of this file are subject to the Mozilla Public License Version 1.1
+ * See LICENSE.TXT at the top of this package for the full license terms.
+ */
+package eu.etaxonomy.taxeditor.lazyloading;
+
+import java.util.HashSet;
+import java.util.Iterator;
+import java.util.List;
+import java.util.Set;
+import java.util.UUID;
+
+import org.apache.log4j.Logger;
+import org.junit.Assert;
+import org.junit.BeforeClass;
+import org.junit.Ignore;
+import org.junit.Test;
+import org.unitils.dbunit.annotation.DataSet;
+
+import eu.etaxonomy.cdm.api.application.CdmApplicationRemoteController;
+import eu.etaxonomy.cdm.api.service.IClassificationService;
+import eu.etaxonomy.cdm.api.service.ITaxonService;
+import eu.etaxonomy.cdm.model.agent.Person;
+import eu.etaxonomy.cdm.model.agent.Team;
+import eu.etaxonomy.cdm.model.common.CdmBase;
+import eu.etaxonomy.cdm.model.name.BotanicalName;
+import eu.etaxonomy.cdm.model.name.NonViralName;
+import eu.etaxonomy.cdm.model.name.TaxonNameBase;
+import eu.etaxonomy.cdm.model.taxon.Classification;
+import eu.etaxonomy.cdm.model.taxon.SynonymRelationship;
+import eu.etaxonomy.cdm.model.taxon.Taxon;
+import eu.etaxonomy.cdm.model.taxon.TaxonNode;
+import eu.etaxonomy.taxeditor.httpinvoker.BaseRemotingTest;
+
+
+
+
+/**
+ * Class to test the {@link CdmApplicationRemoteController}
+ *
+ */
+// FIXME:Remoting need to create a proper dataset for this test
+// Could be combined with RemotePersistentCollectionTest
+@Ignore
+@DataSet
+public class AbstractLazyInitializerTest extends BaseRemotingTest {
+ private static final Logger logger = Logger.getLogger(AbstractLazyInitializerTest.class);
+
+ private static IClassificationService classificationService;
+ private static ITaxonService taxonService;
+
+ private static List<TaxonNode> taxonNodes;
+
+ private final UUID taxonUuid1 = UUID.fromString("8217ef77-2ab1-4318-bd67-ccd0cdef07c4");
+ private final UUID taxonUuid2 = UUID.fromString("ef96fafa-7750-4141-b31b-1ad1daab3e76");
+
+
+ @BeforeClass
+ public static void initializeRemoteLazyLoading() {
+
+ taxonService = getRemoteApplicationController().getTaxonService();
+ classificationService= getRemoteApplicationController().getClassificationService();
+ List<Classification> classifications = classificationService.listClassifications(1,0,null,null);
+ Assert.assertFalse(classifications.isEmpty());
+
+ Classification classification = classifications.get(0);
+ Assert.assertNotNull(classification);
+ taxonNodes = classificationService.getAllNodes();
+ Assert.assertFalse(taxonNodes.isEmpty());
+
+ }
+
+
+
+ @Test
+ public void testCDMEntityGet() {
+ //ITaxonService taxonService = getRemoteApplicationController().getTaxonService();
+ Iterator<TaxonNode> taxonNodeItr = taxonNodes.iterator();
+ int maxcount = 30;
+ int count = 0;
+ while(taxonNodeItr.hasNext() && count <= maxcount) {
+ TaxonNode taxonNode = taxonNodeItr.next();
+ Assert.assertNotNull(taxonNode);
+
+ Taxon taxon = taxonNode.getTaxon();
+ Assert.assertNotNull(taxon);
+
+ String taxonTitle = taxon.getTitleCache();
+ logger.info("Taxon : " + taxonTitle);
+
+ TaxonNameBase name = taxon.getName();
+ Assert.assertNotNull(name);
+
+ String nameTitle = name.getTitleCache();
+ logger.info("Taxon Name : " + nameTitle);
+
+ count++;
+ }
+ }
+
+ @Test
+ public void taxonReadTest() {
+ Taxon taxon = (Taxon)taxonService.find(taxonUuid1);
+
+ }
+
+
+ @Test
+ public void testCDMEntitySave() {
+ Taxon taxon = (Taxon)taxonService.find(taxonUuid1);
+ String oldTitleCache = taxon.getTitleCache();
+
+ System.out.println("Taxon title : " + oldTitleCache);
+
+ taxon.setTitleCache(oldTitleCache + ":updated", true);
+ taxonService.merge(taxon);
+
+ Taxon taxonNew = (Taxon)taxonService.find(taxonUuid1);
+ System.out.println("New Taxon Title : " + taxonNew.getTitleCache());
+
+ Assert.assertTrue("Title caches should not be equal",oldTitleCache.equals(taxonNew.getTitleCache()));
+
+
+ taxonNew.setTitleCache(oldTitleCache, true);
+ taxonService.merge(taxonNew);
+
+ Taxon taxonOld = (Taxon)taxonService.find(taxonUuid1);
+ System.out.println("Old Taxon Title : " + taxonOld.getTitleCache());
+
+ Assert.assertEquals("Title caches should be equal",oldTitleCache,taxonOld.getTitleCache());
+
+ }
+
+
+ @Test
+ public void testCDMEntitySaveLazyNew() {
+ Team combAuthor = Team.NewInstance();
+ combAuthor.addTeamMember(Person.NewTitledInstance("test member"));
+ BotanicalName name = BotanicalName.NewInstance(null, "Test1", null, null, null, null, null, null, null);
+ name.setCombinationAuthorship(combAuthor);
+ Taxon tax1 = Taxon.NewInstance(name, null);
+ UUID taxonUuid1 = taxonService.save(tax1).getUuid();
+
+ Taxon taxon = (Taxon)taxonService.find(taxonUuid1);
+
+ NonViralName nvn = CdmBase.deproxy(taxon.getName(),NonViralName.class);
+ String oldTitleCache = nvn.getTitleCache();
+ logger.info("Taxon Name Title : " + oldTitleCache);
+ nvn.setTitleCache(oldTitleCache + ":updated",false);
+ taxonService.update(taxon);
+
+ Taxon taxonNew = (Taxon)taxonService.find(taxonUuid1);
+ NonViralName nvnNew = CdmBase.deproxy(taxon.getName(),NonViralName.class);
+ logger.info("New Taxon Name Title : " + nvnNew.getTitleCache());
+
+ Assert.assertTrue("Title caches should not be equal",oldTitleCache.equals(nvnNew.getTitleCache()));
+
+ nvnNew.setTitleCache(oldTitleCache, true);
+ taxonService.update(taxon);
+
+ Taxon taxonOld = (Taxon)taxonService.find(taxonUuid1);
+ NonViralName nvnOld = CdmBase.deproxy(taxon.getName(),NonViralName.class);
+ logger.info("Old Taxon Name Title : " + nvnNew.getTitleCache());
+
+ Assert.assertEquals("Title caches should be equal",oldTitleCache,nvnOld.getTitleCache());
+ }
+
+ @Ignore
+ @Test
+ public void testCDMEntitySaveCollection() {
+ Taxon taxon = (Taxon)taxonService.find(taxonUuid1);
+
+ Set<SynonymRelationship> synRelations = taxon.getSynonymRelations();
+ Set<String> relToTitles = new HashSet<String>();
+ Iterator<SynonymRelationship> srItr = synRelations.iterator();
+ while(srItr.hasNext()) {
+ SynonymRelationship sr = srItr.next();
+ System.out.println("Synonym Title Cache : " + sr.getSynonym().getTitleCache());
+ relToTitles.add(sr.getSynonym().getTitleCache());
+ sr.getSynonym().setTitleCache(sr.getSynonym().getTitleCache() + ":updated");
+
+ }
+ taxonService.merge(taxon);
+
+ Taxon taxonNew = (Taxon)taxonService.find(taxonUuid1);
+ Set<SynonymRelationship> synRelationsNew = taxonNew.getSynonymRelations();
+
+ Iterator<SynonymRelationship> srItrNew = synRelationsNew.iterator();
+ Iterator<String> relToTitlesItr = relToTitles.iterator();
+ while(srItrNew.hasNext() && relToTitlesItr.hasNext()) {
+ SynonymRelationship srNew = srItrNew.next();
+ String relToTitle = relToTitlesItr.next();
+ System.out.println("New Synonym Title Cache: " + srNew.getSynonym().getTitleCache());
+ Assert.assertTrue("Synonym Title caches should not be equal", srNew.getSynonym().getTitleCache().equals(relToTitle));
+ srNew.getSynonym().setTitleCache(relToTitle);
+ }
+
+ Taxon taxonOld = (Taxon)taxonService.find(taxonUuid1);
+
+ Set<SynonymRelationship> synRelationsOld = taxonNew.getSynonymRelations();
+ Iterator<SynonymRelationship> srItrOld = synRelationsOld.iterator();
+ relToTitlesItr = relToTitles.iterator();
+ while(srItrOld.hasNext() && relToTitlesItr.hasNext()) {
+ SynonymRelationship srOld = srItrOld.next();
+ String relToTitle = relToTitlesItr.next();
+ System.out.println("New Synonym Title Cache: " + srOld.getSynonym().getTitleCache());
+ Assert.assertEquals("Synonym Title caches should be equal", srOld.getSynonym().getTitleCache(), relToTitle);
+
+ }
+ }
+}
--- /dev/null
+package eu.etaxonomy.taxeditor.lazyloading;
+
+import org.apache.log4j.Logger;
+import org.junit.Assert;
+import org.junit.Test;
+
+import eu.etaxonomy.cdm.api.application.CdmApplicationState;
+import eu.etaxonomy.cdm.api.cache.CdmServiceCacher;
+import eu.etaxonomy.cdm.model.common.Language;
+import eu.etaxonomy.taxeditor.httpinvoker.RemotingSessionAwareTest;
+
+
+public class CdmServiceCacherTest extends RemotingSessionAwareTest {
+ private static final Logger logger = Logger.getLogger(CdmServiceCacherTest.class);
+
+
+ private static CdmServiceCacher cdmServiceCacher = CdmApplicationState.getCdmServiceCacher();
+
+ @Test
+ public void testLanguageCache() {
+ Language defaultLanguage = Language.getDefaultLanguage();
+
+ Language defaultLanguageInCache = (Language)cdmServiceCacher.getFromCache(defaultLanguage.getUuid());
+ Assert.assertEquals("Loaded Language Term should match Language Term in Cache",defaultLanguage,defaultLanguageInCache);
+
+ Language language = Language.getLanguageFromUuid(Language.uuidFrench);
+ Language languageInCache = (Language)cdmServiceCacher.getFromCache(language.getUuid());
+ Assert.assertEquals("Loaded Language Term should match Language Term in Cache",language,languageInCache);
+
+ }
+
+}
--- /dev/null
+// $Id$
+/**
+* Copyright (C) 2015 EDIT
+* European Distributed Institute of Taxonomy
+* http://www.e-taxonomy.eu
+*
+* The contents of this file are subject to the Mozilla Public License Version 1.1
+* See LICENSE.TXT at the top of this package for the full license terms.
+*/
+package eu.etaxonomy.taxeditor.lazyloading;
+
+import java.util.Arrays;
+import java.util.List;
+import java.util.Set;
+import java.util.UUID;
+
+import org.junit.Ignore;
+import org.junit.Test;
+
+import eu.etaxonomy.cdm.api.service.ITaxonService;
+import eu.etaxonomy.cdm.model.common.CdmBase;
+import eu.etaxonomy.cdm.model.name.TaxonNameBase;
+import eu.etaxonomy.cdm.model.taxon.Synonym;
+import eu.etaxonomy.cdm.model.taxon.SynonymRelationship;
+import eu.etaxonomy.cdm.model.taxon.Taxon;
+import eu.etaxonomy.cdm.model.taxon.TaxonBase;
+import eu.etaxonomy.taxeditor.httpinvoker.BaseRemotingTest;
+import eu.etaxonomy.taxeditor.store.CdmStore;
+
+/**
+ * This test class is primarily for performance testing.
+ * It should be used to make read-only calls to the target cdm-server.
+ *
+ * @author cmathew
+ * @date 26 Aug 2015
+ *
+ */
+//FIXME:Remoting ignoring until we can target integration servers
+@Ignore
+public class PropertyPathsTest extends BaseRemotingTest {
+
+ @Test
+ public void taxonLoadTest() {
+ // load taxon Crepis from cichorieae
+ UUID taxonBaseUuid = UUID.fromString("d0ae2121-1c32-4737-8c49-f871d429fd90");
+ List<String> taxonBasePropertyPaths = Arrays.asList(new String[] {
+ "synonymRelations.synonym.name.status.type",
+ "name.homotypicalGroup.typifiedNames.taxonBases.synonymRelations.relatedFrom.name.status"
+ });
+ TaxonBase taxonBase = CdmStore.getService(ITaxonService.class).load(taxonBaseUuid, taxonBasePropertyPaths);
+ Taxon taxon = CdmBase.deproxy(taxonBase, Taxon.class);
+ Set<SynonymRelationship> synonymRelations = taxon.getSynonymRelations();
+ for(SynonymRelationship rel : synonymRelations) {
+ rel.getSynonym().getName().getStatus().size();
+ }
+ Set<TaxonNameBase> typifiedNames = taxon.getName().getHomotypicalGroup().getTypifiedNames();
+ for(TaxonNameBase name : typifiedNames) {
+ Set<TaxonBase> taxonBases = name.getTaxonBases();
+ for(TaxonBase tb : taxonBases) {
+ if(tb instanceof Synonym) {
+ Synonym syn = CdmBase.deproxy(tb, Synonym.class);
+ Set<SynonymRelationship> rels = syn.getSynonymRelations();
+ for(SynonymRelationship rel : rels) {
+ rel.getSynonym().getName().getStatus().size();
+ }
+ }
+ if(tb instanceof Taxon) {
+ Taxon syn = CdmBase.deproxy(tb, Taxon.class);
+ Set<SynonymRelationship> rels = syn.getSynonymRelations();
+ for(SynonymRelationship rel : rels) {
+ rel.getSynonym().getName().getStatus().size();
+ }
+ }
+ }
+ }
+ }
+
+}
--- /dev/null
+/**
+ * Copyright (C) 2014 EDIT
+ * European Distributed Institute of Taxonomy
+ * http://www.e-taxonomy.eu
+ *
+ * The contents of this file are subject to the Mozilla Public License Version 1.1
+ * See LICENSE.TXT at the top of this package for the full license terms.
+ */
+
+package eu.etaxonomy.taxeditor.lazyloading;
+
+import java.util.Arrays;
+import java.util.HashSet;
+import java.util.Iterator;
+import java.util.List;
+import java.util.Set;
+import java.util.UUID;
+
+import org.apache.log4j.Logger;
+import org.junit.Assert;
+import org.junit.BeforeClass;
+import org.junit.Ignore;
+import org.junit.Test;
+
+import eu.etaxonomy.cdm.api.service.IClassificationService;
+import eu.etaxonomy.cdm.api.service.ITaxonService;
+import eu.etaxonomy.cdm.model.agent.Person;
+import eu.etaxonomy.cdm.model.agent.Team;
+import eu.etaxonomy.cdm.model.common.CdmBase;
+import eu.etaxonomy.cdm.model.name.BotanicalName;
+import eu.etaxonomy.cdm.model.name.NonViralName;
+import eu.etaxonomy.cdm.model.name.TaxonNameBase;
+import eu.etaxonomy.cdm.model.taxon.SynonymRelationship;
+import eu.etaxonomy.cdm.model.taxon.Taxon;
+import eu.etaxonomy.cdm.model.taxon.TaxonNode;
+import eu.etaxonomy.taxeditor.httpinvoker.BaseRemotingTest;
+
+
+
+/**
+ * Test class which tests remoting for persistent cdm entities.
+ *
+ * FIXME:Remoting saving tests are ignored until the merge development is underway
+ * @author c.mathew
+ *
+ */
+//FIXME:Remoting need to create a proper dataset for this test
+//Could be combined with AbstractLazyInitializerTest
+@Ignore
+public class RemoteLazyLoadingTest extends BaseRemotingTest {
+
+ private static final Logger logger = Logger.getLogger(RemoteLazyLoadingTest.class);
+
+ private static IClassificationService classificationService;
+ private static ITaxonService taxonService;
+
+ private static List<TaxonNode> taxonNodes;
+
+ private final UUID taxonUuid1 = UUID.fromString("8217ef77-2ab1-4318-bd67-ccd0cdef07c4");
+ private final UUID taxonUuid2 = UUID.fromString("ef96fafa-7750-4141-b31b-1ad1daab3e76");
+
+
+ @BeforeClass
+ public static void initializeRemoteLazyLoading() {
+ taxonService = getRemoteApplicationController().getTaxonService();
+
+ classificationService= getRemoteApplicationController().getClassificationService();
+ //List<Classification> classifications = classificationService.listClassifications(1,0,null,null);
+// Assert.assertFalse(classifications.isEmpty());
+//
+// Classification classification = classifications.get(0);
+// Assert.assertNotNull(classification);
+ taxonNodes = classificationService.getAllNodes();
+ Assert.assertFalse(taxonNodes.isEmpty());
+
+ }
+
+
+
+ @Test
+ public void testCDMEntityGet() {
+ Iterator<TaxonNode> taxonNodeItr = taxonNodes.iterator();
+ int maxcount = 30;
+ int count = 0;
+ while(taxonNodeItr.hasNext() && count <= maxcount) {
+ TaxonNode taxonNode = taxonNodeItr.next();
+ Assert.assertNotNull(taxonNode);
+
+ Taxon taxon = taxonNode.getTaxon();
+ Assert.assertNotNull(taxon);
+
+ String taxonTitle = taxon.getTitleCache();
+ logger.info("Taxon : " + taxonTitle);
+
+ TaxonNameBase name = taxon.getName();
+ Assert.assertNotNull(name);
+
+ String nameTitle = name.getTitleCache();
+ logger.info("Taxon Name : " + nameTitle);
+
+ count++;
+ }
+
+
+ }
+
+ @Test
+ public void test() {
+
+ }
+
+ @Test
+ public void testCDMEntitySaveEager() {
+ Taxon taxon = (Taxon)taxonService.find(taxonUuid1);
+ String oldTitleCache = taxon.getTitleCache();
+
+ System.out.println("Taxon title : " + oldTitleCache);
+
+ taxon.setTitleCache(oldTitleCache + ":updated");
+ taxonService.merge(taxon);
+
+ Taxon taxonNew = (Taxon)taxonService.find(taxonUuid1);
+ System.out.println("New Taxon Title : " + taxonNew.getTitleCache());
+
+ Assert.assertTrue("Title caches should not be equal",oldTitleCache.equals(taxonNew.getTitleCache()));
+
+ taxonNew.setTitleCache(oldTitleCache);
+ taxonService.merge(taxonNew);
+
+ Taxon taxonOld = (Taxon)taxonService.find(taxonUuid1);
+ System.out.println("Old Taxon Title : " + taxonOld.getTitleCache());
+
+ Assert.assertEquals("Title caches should be equal",oldTitleCache,taxonOld.getTitleCache());
+
+ }
+
+
+ @Test
+ public void testCDMEntityUpdate() {
+
+ Team combAuthor = Team.NewInstance();
+ combAuthor.addTeamMember(Person.NewTitledInstance("test member"));
+ BotanicalName name = BotanicalName.NewInstance(null, "Test1", null, null, null, null, null, null, null);
+ name.setCombinationAuthorship(combAuthor);
+ Taxon taxon = Taxon.NewInstance(name, null);
+ UUID taxonUuid = taxonService.save(taxon).getUuid();
+
+ // Taxon taxon = (Taxon)taxonService.find(taxonUuid1);
+ // NonViralName nvn = CdmBase.deproxy(taxon.getName(),NonViralName.class);
+ // String oldTitleCache = nvn.getTitleCache();
+ // System.out.println("Taxon Name Title : " + oldTitleCache);
+ // nvn.setTitleCache(oldTitleCache + ":updated", true);
+ //
+ // taxon.setTitleCache(oldTitleCache + ":updated",true);
+ // try {
+ // taxonService.update(taxon);
+ // } catch (LazyInitializationException lie) {
+ // lie.printStackTrace();
+ // }
+
+ List<String> TAXON_INIT_STRATEGY = Arrays.asList(new String[] {
+ "name"
+ });
+ Taxon taxonNew = (Taxon)taxonService.findTaxonByUuid(taxonUuid,TAXON_INIT_STRATEGY);
+ NonViralName nvn = CdmBase.deproxy(taxonNew.getName(),NonViralName.class);
+ Team team = CdmBase.deproxy(nvn.getCombinationAuthorship(),Team.class);
+ String oldTitleCache = nvn.getTitleCache();
+ System.out.println("Taxon Name Title : " + oldTitleCache);
+ nvn.setTitleCache(oldTitleCache + ":updated", true);
+ taxonService.update(taxonNew);
+
+ }
+
+
+ @Test
+ public void testCDMEntitySaveLazy() {
+ Taxon taxon = (Taxon)taxonService.find(taxonUuid1);
+
+ NonViralName nvn = CdmBase.deproxy(taxon.getName(),NonViralName.class);
+ String oldTitleCache = nvn.getTitleCache();
+ System.out.println("Taxon Name Title : " + oldTitleCache);
+ nvn.setTitleCache(oldTitleCache + ":updated", true);
+ taxonService.update(taxon);
+
+ // Taxon taxonNew = (Taxon)taxonService.find(taxonUuid1);
+ // NonViralName nvnNew = CdmBase.deproxy(taxon.getName(),NonViralName.class);
+ // System.out.println("New Taxon Name Title : " + nvnNew.getTitleCache());
+ //
+ // Assert.assertNotEquals("Title caches should not be equal",oldTitleCache,nvnNew.getTitleCache());
+ //
+ // nvnNew.setTitleCache(oldTitleCache, true);
+ // taxonService.update(taxon);
+ //
+ // Taxon taxonOld = (Taxon)taxonService.find(taxonUuid1);
+ // NonViralName nvnOld = CdmBase.deproxy(taxon.getName(),NonViralName.class);
+ // System.out.println("Old Taxon Name Title : " + nvnNew.getTitleCache());
+ //
+ // Assert.assertEquals("Title caches should be equal",oldTitleCache,nvnOld.getTitleCache());
+ }
+
+ @Test
+ public void testCDMEntitySaveLazyNew() {
+ Team combAuthor = Team.NewInstance();
+ combAuthor.addTeamMember(Person.NewTitledInstance("test member"));
+ BotanicalName name = BotanicalName.NewInstance(null, "Test1", null, null, null, null, null, null, null);
+ name.setCombinationAuthorship(combAuthor);
+ Taxon tax1 = Taxon.NewInstance(name, null);
+ UUID taxonUuid1 = taxonService.save(tax1).getUuid();
+
+ Taxon taxon = (Taxon)taxonService.find(taxonUuid1);
+
+ NonViralName nvn = CdmBase.deproxy(taxon.getName(),NonViralName.class);
+ String oldTitleCache = nvn.getTitleCache();
+ logger.info("Taxon Name Title : " + oldTitleCache);
+ nvn.setTitleCache(oldTitleCache + ":updated",false);
+ taxonService.update(taxon);
+
+ Taxon taxonNew = (Taxon)taxonService.find(taxonUuid1);
+ NonViralName nvnNew = CdmBase.deproxy(taxon.getName(),NonViralName.class);
+ logger.info("New Taxon Name Title : " + nvnNew.getTitleCache());
+
+ Assert.assertTrue("Title caches should not be equal",oldTitleCache.equals(nvnNew.getTitleCache()));
+
+ nvnNew.setTitleCache(oldTitleCache, true);
+ taxonService.update(taxon);
+
+ Taxon taxonOld = (Taxon)taxonService.find(taxonUuid1);
+ NonViralName nvnOld = CdmBase.deproxy(taxon.getName(),NonViralName.class);
+ logger.info("Old Taxon Name Title : " + nvnNew.getTitleCache());
+
+ Assert.assertEquals("Title caches should be equal",oldTitleCache,nvnOld.getTitleCache());
+ }
+ @Ignore
+ @Test
+ public void testCDMEntitySaveCollection() {
+ Taxon taxon = (Taxon)taxonService.find(taxonUuid1);
+
+ Set<SynonymRelationship> synRelations = taxon.getSynonymRelations();
+ Set<String> relToTitles = new HashSet<String>();
+ Iterator<SynonymRelationship> srItr = synRelations.iterator();
+ while(srItr.hasNext()) {
+ SynonymRelationship sr = srItr.next();
+ System.out.println("Synonym Title Cache : " + sr.getSynonym().getTitleCache());
+ relToTitles.add(sr.getSynonym().getTitleCache());
+ sr.getSynonym().setTitleCache(sr.getSynonym().getTitleCache() + ":updated");
+
+ }
+ taxonService.merge(taxon);
+
+ Taxon taxonNew = (Taxon)taxonService.find(taxonUuid1);
+ Set<SynonymRelationship> synRelationsNew = taxonNew.getSynonymRelations();
+
+ Iterator<SynonymRelationship> srItrNew = synRelationsNew.iterator();
+ Iterator<String> relToTitlesItr = relToTitles.iterator();
+ while(srItrNew.hasNext() && relToTitlesItr.hasNext()) {
+ SynonymRelationship srNew = srItrNew.next();
+ String relToTitle = relToTitlesItr.next();
+ System.out.println("New Synonym Title Cache: " + srNew.getSynonym().getTitleCache());
+ Assert.assertTrue("Synonym Title caches should not be equal", srNew.getSynonym().getTitleCache().equals(relToTitle));
+ srNew.getSynonym().setTitleCache(relToTitle);
+ }
+
+ Taxon taxonOld = (Taxon)taxonService.find(taxonUuid1);
+
+ Set<SynonymRelationship> synRelationsOld = taxonNew.getSynonymRelations();
+ Iterator<SynonymRelationship> srItrOld = synRelationsOld.iterator();
+ relToTitlesItr = relToTitles.iterator();
+ while(srItrOld.hasNext() && relToTitlesItr.hasNext()) {
+ SynonymRelationship srOld = srItrOld.next();
+ String relToTitle = relToTitlesItr.next();
+ System.out.println("New Synonym Title Cache: " + srOld.getSynonym().getTitleCache());
+ Assert.assertEquals("Synonym Title caches should be equal", srOld.getSynonym().getTitleCache(), relToTitle);
+
+ }
+ }
+}
--- /dev/null
+/**
+* Copyright (C) 2014 EDIT
+* European Distributed Institute of Taxonomy
+* http://www.e-taxonomy.eu
+*
+* The contents of this file are subject to the Mozilla Public License Version 1.1
+* See LICENSE.TXT at the top of this package for the full license terms.
+*/
+package eu.etaxonomy.taxeditor.lazyloading;
+
+import java.util.Iterator;
+import java.util.List;
+import java.util.Map;
+import java.util.Set;
+
+import org.apache.log4j.Logger;
+import org.junit.Assert;
+import org.junit.BeforeClass;
+import org.junit.Ignore;
+import org.junit.Test;
+
+import eu.etaxonomy.cdm.api.service.IClassificationService;
+import eu.etaxonomy.cdm.api.service.ICommonService;
+import eu.etaxonomy.cdm.model.common.Language;
+import eu.etaxonomy.cdm.model.common.LanguageString;
+import eu.etaxonomy.cdm.model.description.DescriptionElementBase;
+import eu.etaxonomy.cdm.model.description.TaxonDescription;
+import eu.etaxonomy.cdm.model.description.TextData;
+import eu.etaxonomy.cdm.model.taxon.Taxon;
+import eu.etaxonomy.cdm.model.taxon.TaxonNode;
+import eu.etaxonomy.taxeditor.httpinvoker.BaseRemotingTest;
+
+/**
+ * Test class which tests remoting for persistent collections.
+ *
+ * @author c.mathew
+ * @created 13.03.2014
+ */
+//FIXME:Remoting need to create a proper dataset for this test
+//Could be combined with AbstractLazyInitializerTest
+@Ignore
+public class RemotePersistentCollectionTest extends BaseRemotingTest {
+ private static final Logger logger = Logger.getLogger(RemotePersistentCollectionTest.class);
+
+ private static IClassificationService classificationService;
+ private static ICommonService commonService;
+
+ @BeforeClass
+ public static void initializeServices() {
+ classificationService = getRemoteApplicationController().getClassificationService();
+ commonService = getRemoteApplicationController().getCommonService();
+ }
+
+ /**
+ * Test method which checks remoting for persistent lists.
+ *
+ */
+ @Test
+ public void persistentListTest() {
+
+ List<TaxonNode> taxonNodes = classificationService.getAllNodes();
+ int size = taxonNodes.size();
+ logger.debug("classificationService.getAllNodes() size : " + size);
+ TaxonNode taxonNode = null;
+ if(size > 0) {
+ Assert.assertFalse(taxonNodes.isEmpty());
+
+ taxonNode = taxonNodes.get(0);
+ Assert.assertNotNull(taxonNode);
+ Assert.assertTrue(taxonNodes.contains(taxonNode));
+
+ // get the list of child nodes, which will give a
+ // proxy list which is not yet initialised
+ List<TaxonNode> childNodes = taxonNode.getChildNodes();
+ // this size call will first initialise the list locally by internally
+ // calling the ICommonService.initializeCollection method and then
+ // call size on the initialised list
+ int childCount = childNodes.size();
+
+ // this size call will initialise the list remotely and only return the
+ // size of the list
+ int remoteChildCount = commonService.size(taxonNode.getUuid(), "childNodes");
+ Assert.assertEquals(childCount, remoteChildCount);
+
+ String firstNodeTaxonTitle = taxonNode.getTaxon().getTitleCache();
+ Assert.assertNotNull(firstNodeTaxonTitle);
+
+ if(childCount > 0) {
+ Assert.assertFalse(childNodes.isEmpty());
+ // this get call will use the already initialised list to get the
+ // 0th element
+ TaxonNode localTaxonNode = childNodes.get(0);
+
+ // this get call will initialise the list remotely and only return the
+ // 0th element from the list
+ TaxonNode remoteTaxonNode = (TaxonNode)commonService.get(taxonNode.getUuid(), "childNodes",0);
+
+ // the locally and remotely retrieved taxon node should exist in the
+ // (local and remote) child nodes list, should be not-null and should be equal to each other
+ Assert.assertTrue(taxonNode.getChildNodes().contains(localTaxonNode));
+ Assert.assertTrue(taxonNode.getChildNodes().contains(remoteTaxonNode));
+ Assert.assertTrue(commonService.contains(taxonNode.getUuid(), "childNodes", localTaxonNode));
+ Assert.assertTrue(commonService.contains(taxonNode.getUuid(), "childNodes", remoteTaxonNode));
+ Assert.assertNotNull(remoteTaxonNode);
+ Assert.assertNotNull(localTaxonNode);
+ Assert.assertEquals(remoteTaxonNode,localTaxonNode);
+ }
+ }
+ }
+
+// @Test
+// public void persistentSetTest() {
+// List<Classification> classifications = classificationService.listClassifications(1,0,null,null);
+// int size = classifications.size();
+// if(size > 0) {
+// Assert.assertFalse(classifications.isEmpty());
+//
+// Classification classification = classifications.get(0);
+// Assert.assertNotNull(classification);
+// Assert.assertTrue(classifications.contains(classification));
+//
+// TaxonNode rootTaxonNode = classification.getRootNode();
+// // get the list of child nodes, which will give a
+// // proxy list which is not yet initialised
+// List<TaxonNode> childNodes = rootTaxonNode.getChildNodes();
+//
+// // this size call will initialise the list locally by internally
+// // calling the ICommonService.initializeCollection method
+// int childCount = childNodes.size();
+//
+// if(childCount > 0) {
+// Assert.assertFalse(childNodes.isEmpty());
+//
+// // this get call will use the already initialised list to get the
+// // 0th element
+// Taxon localTaxon = childNodes.get(0).getTaxon();
+// Assert.assertNotNull(localTaxon);
+//
+// TaxonNameBase taxonName = localTaxon.getName();
+// Assert.assertNotNull(taxonName);
+//
+// // get the list of taxa, which will give a
+// // proxy set which is not yet initialised
+// Set<Taxon> taxa = taxonName.getTaxonBases();
+//
+// // this size call will initialise the list locally by internally
+// // calling the ICommonService.initializeCollection method
+// int taxaCount = taxa.size();
+// Assert.assertNotEquals(taxaCount,-1);
+//
+// if(taxaCount > 0) {
+// Assert.assertFalse(taxa.isEmpty());
+// // the locally retrieved taxon should exist in the
+// // (local and remote) taxon list and should be not-null
+// Assert.assertTrue(taxa.contains(localTaxon));
+// Assert.assertNotNull(localTaxon);
+// Assert.assertTrue(commonService.contains((PersistentCollection)taxa, localTaxon));
+// }
+// }
+// }
+// }
+
+ @Test
+ public void persistentMapTest() {
+ List<TaxonNode> taxonNodes = classificationService.getAllNodes();
+ // calling iterator will initialise the collection
+ Iterator<TaxonNode> taxonNodesItr = taxonNodes.iterator();
+ while(taxonNodesItr.hasNext()) {
+ TaxonNode taxonNode = taxonNodesItr.next();
+ Taxon taxon = taxonNode.getTaxon();
+
+ if(taxon != null) {
+ Set<TaxonDescription> descriptions = taxon.getDescriptions();
+ Iterator<TaxonDescription> descriptionsItr = descriptions.iterator();
+ while(descriptionsItr.hasNext()) {
+ TaxonDescription desc = descriptionsItr.next();
+ if(desc != null) {
+ for (DescriptionElementBase element : desc.getElements()){
+ if (element.isInstanceOf(TextData.class)){
+ // usually a call to 'get' collections should not initialise the collection,
+ // but the 'getMultilanguageText' call internally calls readSize on the collection
+ // which triggers the initialisation
+ Map<Language, LanguageString> multilanguagetextMap = ((TextData)element).getMultilanguageText();
+ //boolean init = AbstractPersistentCollection.isInitialized(multilanguagetextMap);
+ //Assert.assertTrue(init);
+
+ if(!multilanguagetextMap.isEmpty()) {
+ // found a map whcih we can test!
+ logger.info("Found Non-empty multilanguagetextMap");
+ boolean empty = commonService.isEmpty(element.getUuid(), "multilanguageText");
+ Assert.assertFalse(empty);
+ // test retrieval of key set, which should already by initialised
+ Set<Language> langKeySet = multilanguagetextMap.keySet();
+ Iterator<Language> langKeySetItr = langKeySet.iterator();
+ while(langKeySetItr.hasNext()) {
+ Language key = langKeySetItr.next();
+ // testing 'containsKey' on locally initialised collection
+ boolean localContainsKey = multilanguagetextMap.containsKey(key);
+ Assert.assertTrue(localContainsKey);
+ // testing 'containsKey' on remotely initialised collection
+ boolean remoteContainsKey =
+ commonService.containsKey(element.getUuid(), "multilanguageText", key);
+ Assert.assertTrue(remoteContainsKey);
+
+ LanguageString value = multilanguagetextMap.get(key);
+ // testing 'containsValue' on locally initialised collection
+ boolean localContainsValue = multilanguagetextMap.containsValue(value);
+ Assert.assertTrue(localContainsValue);
+ // testing 'containsValue' on remotely initialised collection
+ boolean remoteContainsValue =
+ commonService.containsValue(element.getUuid(), "multilanguageText", value);
+ Assert.assertTrue(remoteContainsValue);
+
+ }
+ return;
+ }
+ }
+ }
+ }
+ }
+ }
+ }
+ }
+}
/**\r
- * \r
+ *\r
*/\r
package eu.etaxonomy.taxeditor.navigation.navigator.contextmenu;\r
\r
import org.eclipse.swtbot.eclipse.finder.widgets.SWTBotView;\r
import org.eclipse.swtbot.swt.finder.widgets.SWTBotTree;\r
import org.junit.Before;\r
+import org.junit.Ignore;\r
import org.junit.Test;\r
\r
import eu.etaxonomy.taxeditor.test.AbstractEditorTest;\r
* @author n.hoffmann\r
*\r
*/\r
+@Ignore\r
public class ClassificationTest extends AbstractEditorTest {\r
\r
private SWTBotView navigatorView;\r
private SWTBotTree tree;\r
\r
- @Before\r
+ @Override\r
+ @Before\r
public void setup() {\r
super.setup();\r
navigatorView = utils.view("Taxon Navigator");\r
tree = utils.tree(navigatorView.getWidget());\r
}\r
- \r
+\r
@Test\r
public void canDeleteClassification() throws Exception {\r
tree.select(0);\r
bot.waitUntil(Conditions.shellIsActive("Confirm Deletion"));\r
utils.ok();\r
}\r
- \r
+\r
@Test\r
public void canCreateClassification() throws Exception {\r
tree.setFocus();\r
/**\r
- * \r
+ *\r
*/\r
package eu.etaxonomy.taxeditor.newWizard;\r
\r
\r
import org.eclipse.swtbot.eclipse.finder.waits.Conditions;\r
import org.eclipse.swtbot.swt.finder.widgets.SWTBotButton;\r
+import org.junit.Ignore;\r
import org.junit.Test;\r
\r
import eu.etaxonomy.taxeditor.test.AbstractEditorTest;\r
* @author n.hoffmann\r
*\r
*/\r
+@Ignore\r
public class NewTaxonWizardTest extends AbstractEditorTest {\r
\r
@Override\r
bot.menu("General").menu("New").menu("Taxon").click();\r
bot.waitUntil(Conditions.shellIsActive("New Entity"));\r
}\r
- \r
+\r
@Test\r
public void unalteredDialogCanNotBefinished() {\r
boolean finishIsEnabled = bot.button("Finish").isEnabled();\r
Assert.assertEquals(false, finishIsEnabled);\r
utils.cancel();\r
}\r
- \r
+\r
@Test\r
public void canCreateNewTaxonMinimal(){\r
utils.openFilteredSelection(0, "Choose a Classification");\r
bot.textWithLabel("New Taxon").setText(newTaxonName);\r
bot.waitUntil(Conditions.widgetIsEnabled(bot.button("Finish")));\r
utils.finish();\r
- \r
+\r
// bot.waitUntil(Conditions.waitForEditor(WithPartId.withPartId(MultiPageTaxonEditor.ID)));\r
// Assert.assertEquals(newTaxonName, bot.activeEditor().getTitle());\r
}\r
- \r
- \r
\r
- \r
+\r
+\r
+\r
}\r
--- /dev/null
+// $Id$
+/**
+* Copyright (C) 2007 EDIT
+* European Distributed Institute of Taxonomy
+* http://www.e-taxonomy.eu
+*
+* The contents of this file are subject to the Mozilla Public License Version 1.1
+* See LICENSE.TXT at the top of this package for the full license terms.
+*/
+
+package eu.etaxonomy.taxeditor.operation;
+
+import org.eclipse.core.commands.operations.AbstractOperation;
+import org.eclipse.core.commands.operations.IUndoContext;
+import org.eclipse.core.runtime.IAdaptable;
+import org.eclipse.core.runtime.IProgressMonitor;
+import org.eclipse.core.runtime.NullProgressMonitor;
+import org.junit.Before;
+
+import eu.etaxonomy.cdm.api.conversation.IConversationEnabled;
+import eu.etaxonomy.taxeditor.httpinvoker.RemotingSessionAwareTest;
+import eu.etaxonomy.taxeditor.operation.IPostOperationEnabled;
+import eu.etaxonomy.taxeditor.operation.RemotingCdmUpdateOperation;
+import eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled;
+import eu.etaxonomy.taxeditor.test.MockConversationEnabled;
+
+/**
+ * @author n.hoffmann
+ * @created 15.04.2009
+ * @version 1.0
+ */
+public abstract class BaseOperationTest extends RemotingSessionAwareTest {
+
+ public static final IUndoContext undoContext = null;
+
+ public static final IProgressMonitor monitor = new NullProgressMonitor();
+ public static final IAdaptable info = null;
+ public static final IPostOperationEnabled postOperation = null;
+ public static final IConversationEnabled conversationEnabled = new MockConversationEnabled();
+ public static final ICdmEntitySessionEnabled cdmEntitySessionEnabled = null;
+
+ protected static AbstractOperation operation;
+
+ @Before
+ public void initializeOperations() {
+ RemotingCdmUpdateOperation.throwExceptions = true;
+ }
+
+}
--- /dev/null
+// $Id$
+/**
+* Copyright (C) 2015 EDIT
+* European Distributed Institute of Taxonomy
+* http://www.e-taxonomy.eu
+*
+* The contents of this file are subject to the Mozilla Public License Version 1.1
+* See LICENSE.TXT at the top of this package for the full license terms.
+*/
+package eu.etaxonomy.taxeditor.operation;
+
+import java.util.ArrayList;
+import java.util.List;
+import java.util.UUID;
+
+import org.eclipse.core.commands.ExecutionException;
+import org.junit.Assert;
+import org.junit.Ignore;
+import org.junit.Test;
+import org.unitils.dbunit.annotation.DataSet;
+
+import eu.etaxonomy.cdm.api.service.IPolytomousKeyService;
+import eu.etaxonomy.cdm.model.description.PolytomousKey;
+import eu.etaxonomy.taxeditor.navigation.key.polytomous.operation.RemotingDeletePolytomousKeyOperation;
+import eu.etaxonomy.taxeditor.navigation.key.polytomous.operation.RemotingUpdatePolytomousKeyAllNodesOperation;
+
+/**
+ * @author cmathew
+ * @date 25 Jun 2015
+ *
+ */
+@DataSet
+public class PolytomousKeyViewPartTest extends BaseOperationTest {
+
+ IPolytomousKeyService polytomousKeyService = getRemoteApplicationController().getPolytomousKeyService();
+ private static UUID pkey1Uuid = UUID.fromString("f82cef88-5a9e-4917-9938-d08bda40836f");
+ private static UUID pkey2Uuid = UUID.fromString("a00ca7ec-b660-433c-bd14-596826ab2243");
+ private static UUID pkey3Uuid = UUID.fromString("197bc542-bf5b-4a52-aa66-c65df32c196b");
+
+ @Ignore // waiting for #3998 to be fixed
+ @Test
+ public void testDeletePolytomousKey() throws ExecutionException {
+ List<PolytomousKey> pKeysBeforeDelete = polytomousKeyService.list(PolytomousKey.class, null, null, null, null);
+ int initialCount = pKeysBeforeDelete.size();
+
+ List<PolytomousKey> keysToDelete = new ArrayList<PolytomousKey>();
+ keysToDelete.add(polytomousKeyService.load(pkey1Uuid));
+ keysToDelete.add(polytomousKeyService.load(pkey2Uuid));
+ keysToDelete.add(polytomousKeyService.load(pkey3Uuid));
+
+ List<UUID> uuids = new ArrayList<UUID>();
+ uuids.add(pkey1Uuid);
+ uuids.add(pkey2Uuid);
+ uuids.add(pkey3Uuid);
+
+ int keysToDeleteCount = keysToDelete.size();
+ operation = new RemotingDeletePolytomousKeyOperation(sessionOwner,
+ false,
+ uuids);
+ operation.execute(monitor, info);
+
+ List<PolytomousKey> pKeysAfterDelete = polytomousKeyService.list(PolytomousKey.class, null, null, null, null);
+ Assert.assertEquals(initialCount - keysToDeleteCount, pKeysAfterDelete.size());
+ for(PolytomousKey key : keysToDelete) {
+ Assert.assertFalse(pKeysAfterDelete.contains(key));
+ }
+
+ }
+
+ @Test
+ public void testUpdateAllNodes() throws ExecutionException {
+ operation = new RemotingUpdatePolytomousKeyAllNodesOperation(sessionOwner,
+ false,
+ pkey1Uuid);
+ operation.execute(monitor, info);
+ }
+
+}
--- /dev/null
+// $Id$
+/**
+* Copyright (C) 2015 EDIT
+* European Distributed Institute of Taxonomy
+* http://www.e-taxonomy.eu
+*
+* The contents of this file are subject to the Mozilla Public License Version 1.1
+* See LICENSE.TXT at the top of this package for the full license terms.
+*/
+package eu.etaxonomy.taxeditor.operation;
+
+import java.util.HashSet;
+import java.util.Set;
+import java.util.UUID;
+
+import org.apache.log4j.Logger;
+import org.eclipse.core.commands.ExecutionException;
+import org.junit.Assert;
+import org.junit.BeforeClass;
+import org.junit.Test;
+import org.unitils.dbunit.annotation.DataSet;
+
+import eu.etaxonomy.cdm.api.service.ITaxonNodeService;
+import eu.etaxonomy.cdm.api.service.UpdateResult;
+import eu.etaxonomy.cdm.api.service.UpdateResult.Status;
+import eu.etaxonomy.cdm.api.service.dto.CdmEntityIdentifier;
+import eu.etaxonomy.cdm.model.taxon.TaxonNode;
+import eu.etaxonomy.taxeditor.remoting.cache.ProxyUtils;
+import eu.etaxonomy.taxeditor.store.operations.RemotingTestUpdateOperation;
+
+/**
+ * @author cmathew
+ * @date 26 Jun 2015
+ *
+ */
+@DataSet
+public class RemotingCdmUpdateOperationTest extends BaseOperationTest {
+
+ private static final Logger logger = Logger.getLogger(RemotingCdmUpdateOperationTest.class);
+
+ private static ITaxonNodeService taxonNodeService = getRemoteApplicationController().getTaxonNodeService();
+
+ private static UUID taxonNodeUuid1;
+ private static UUID taxonNodeUuid2;
+ private static UUID taxonNodeUuid3;
+ private static UUID taxonNodeUuid4;
+ private static UUID taxonNodeUuid5;
+
+
+ private static Set<TaxonNode> taxonNodes;
+ private static Set<CdmEntityIdentifier> ceis;
+
+ @BeforeClass
+ public static void initializeUpdatedObjects() {
+ taxonNodeUuid1 = UUID.fromString("b85b5b78-6760-409f-ac91-bb89e95ff2a1");
+ taxonNodeUuid2 = UUID.fromString("6ad8e9e2-f5f6-41ad-aa30-f62a903650db");
+ taxonNodeUuid3 = UUID.fromString("91698cec-615f-4472-9002-feda1a6acded");
+ taxonNodeUuid4 = UUID.fromString("b8439f51-6b96-445a-b401-7a836ba1cf58");
+ taxonNodeUuid5 = UUID.fromString("629b3fd3f-29b4-4011-ab12-9c1ad1607dbd");
+
+ }
+
+ @Test
+ public void testUpdateResultWithCdmEntities() throws ExecutionException {
+ TaxonNode taxonNode1 = (TaxonNode) ProxyUtils.deproxy(taxonNodeService.load(taxonNodeUuid1));
+ TaxonNode taxonNode2 = (TaxonNode) ProxyUtils.deproxy(taxonNodeService.load(taxonNodeUuid2));
+ TaxonNode taxonNode3 = (TaxonNode) ProxyUtils.deproxy(taxonNodeService.load(taxonNodeUuid3));
+ TaxonNode taxonNode4 = (TaxonNode) ProxyUtils.deproxy(taxonNodeService.load(taxonNodeUuid4));
+ TaxonNode taxonNode5 = (TaxonNode) ProxyUtils.deproxy(taxonNodeService.load(taxonNodeUuid5));
+
+ taxonNodes = new HashSet<TaxonNode>();
+ taxonNodes.add(taxonNode1);
+ taxonNodes.add(taxonNode2);
+ taxonNodes.add(taxonNode3);
+ taxonNodes.add(taxonNode4);
+ taxonNodes.add(taxonNode5);
+
+ UpdateResult result = new UpdateResult();
+ result.addUpdatedObjects(taxonNodes);
+ result.setStatus(Status.OK);
+
+ sessionOwner.setExpectedUpdatedObjects(taxonNodes);
+
+ operation = new RemotingTestUpdateOperation(result, sessionOwner, false);
+ operation.execute(monitor, info);
+
+ Assert.assertEquals(taxonNodes, sessionOwner.getEventUpdatedObjects());
+ }
+
+ @Test
+ public void testUpdateResultWithCdmIdentities() throws ExecutionException {
+ TaxonNode taxonNode1 = (TaxonNode) ProxyUtils.deproxy(taxonNodeService.load(taxonNodeUuid1));
+ TaxonNode taxonNode2 = (TaxonNode) ProxyUtils.deproxy(taxonNodeService.load(taxonNodeUuid2));
+ TaxonNode taxonNode3 = (TaxonNode) ProxyUtils.deproxy(taxonNodeService.load(taxonNodeUuid3));
+ TaxonNode taxonNode4 = (TaxonNode) ProxyUtils.deproxy(taxonNodeService.load(taxonNodeUuid4));
+ TaxonNode taxonNode5 = (TaxonNode) ProxyUtils.deproxy(taxonNodeService.load(taxonNodeUuid5));
+
+ taxonNodes = new HashSet<TaxonNode>();
+ taxonNodes.add(taxonNode1);
+ taxonNodes.add(taxonNode2);
+ taxonNodes.add(taxonNode3);
+ taxonNodes.add(taxonNode4);
+ taxonNodes.add(taxonNode5);
+
+ ceis = new HashSet<CdmEntityIdentifier>();
+ ceis.add(new CdmEntityIdentifier(taxonNode3.getId(),TaxonNode.class));
+ ceis.add(new CdmEntityIdentifier(taxonNode4.getId(),TaxonNode.class));
+ ceis.add(new CdmEntityIdentifier(taxonNode5.getId(),TaxonNode.class));
+
+ UpdateResult result = new UpdateResult();
+ result.addUpdatedObject(taxonNode1);
+ result.addUpdatedObject(taxonNode2);
+ result.addUpdatedCdmIds(ceis);
+
+ result.setStatus(Status.OK);
+ sessionOwner.setExpectedUpdatedObjects(taxonNodes);
+ operation = new RemotingTestUpdateOperation(result, sessionOwner, false);
+ operation.execute(monitor, info);
+
+ Assert.assertEquals(taxonNodes, sessionOwner.getEventUpdatedObjects());
+ }
+
+ @Test
+ public void testUpdateResultWithLoadedCdmIdentities() throws ExecutionException {
+ TaxonNode taxonNode1 = (TaxonNode) ProxyUtils.deproxy(taxonNodeService.load(taxonNodeUuid1));
+ TaxonNode taxonNode2 = (TaxonNode) ProxyUtils.deproxy(taxonNodeService.load(taxonNodeUuid2));
+ TaxonNode taxonNode3 = (TaxonNode) ProxyUtils.deproxy(taxonNodeService.load(taxonNodeUuid3));
+ TaxonNode taxonNode4 = (TaxonNode) ProxyUtils.deproxy(taxonNodeService.load(taxonNodeUuid4));
+ TaxonNode taxonNode5 = (TaxonNode) ProxyUtils.deproxy(taxonNodeService.load(taxonNodeUuid5));
+
+ taxonNodes = new HashSet<TaxonNode>();
+ taxonNodes.add(taxonNode1);
+ taxonNodes.add(taxonNode2);
+ taxonNodes.add(taxonNode3);
+ taxonNodes.add(taxonNode4);
+ taxonNodes.add(taxonNode5);
+
+ ceis = new HashSet<CdmEntityIdentifier>();
+ ceis.add(new CdmEntityIdentifier(taxonNode3.getId(),TaxonNode.class));
+ ceis.add(new CdmEntityIdentifier(taxonNode4.getId(),TaxonNode.class));
+ ceis.add(new CdmEntityIdentifier(taxonNode5.getId(),TaxonNode.class));
+
+
+ UpdateResult result = new UpdateResult();
+ result.addUpdatedObject(taxonNode1);
+ result.addUpdatedObject(taxonNode2);
+ result.addUpdatedCdmIds(ceis);
+ result.addUpdatedCdmId(new CdmEntityIdentifier(46,TaxonNode.class));
+
+ result.setStatus(Status.OK);
+ sessionOwner.setExpectedUpdatedObjects(taxonNodes);
+ operation = new RemotingTestUpdateOperation(result, sessionOwner, false);
+ operation.execute(monitor, info);
+
+ Assert.assertEquals(taxonNodes, sessionOwner.getEventUpdatedObjects());
+ }
+
+ @Test
+ public void testDataChange() throws ExecutionException {
+ TaxonNode taxonNode = (TaxonNode) ProxyUtils.deproxy(taxonNodeService.load(taxonNodeUuid1));
+ CdmEntityIdentifier cei = new CdmEntityIdentifier(taxonNode.getId(), TaxonNode.class);
+
+ taxonNodes = new HashSet<TaxonNode>();
+ taxonNodes.add(taxonNode);
+
+ int taxonNodeCountChildren = taxonNode.getCountChildren();
+ sessionOwner.setExpectedUpdatedObjects(taxonNodes);
+
+ operation = new RemotingTestUpdateOperation(cei, sessionOwner, false);
+ operation.execute(monitor, info);
+
+ Set eventUpdatedObjects = sessionOwner.getEventUpdatedObjects();
+ Assert.assertEquals(taxonNodes, eventUpdatedObjects);
+ Assert.assertEquals(taxonNodeCountChildren + 1, ((TaxonNode)eventUpdatedObjects.iterator().next()).getCountChildren());
+ }
+
+}
--- /dev/null
+// $Id$
+/**
+* Copyright (C) 2015 EDIT
+* European Distributed Institute of Taxonomy
+* http://www.e-taxonomy.eu
+*
+* The contents of this file are subject to the Mozilla Public License Version 1.1
+* See LICENSE.TXT at the top of this package for the full license terms.
+*/
+package eu.etaxonomy.taxeditor.operation;
+
+import java.util.ArrayList;
+import java.util.Iterator;
+import java.util.List;
+import java.util.Set;
+import java.util.UUID;
+
+import org.apache.log4j.Logger;
+import org.eclipse.core.commands.ExecutionException;
+import org.junit.Assert;
+import org.junit.Ignore;
+import org.junit.Test;
+import org.unitils.dbunit.annotation.DataSet;
+
+import eu.etaxonomy.cdm.api.service.IClassificationService;
+import eu.etaxonomy.cdm.api.service.ITaxonNodeService;
+import eu.etaxonomy.cdm.api.service.ITaxonService;
+import eu.etaxonomy.cdm.model.common.Language;
+import eu.etaxonomy.cdm.model.common.OriginalSourceType;
+import eu.etaxonomy.cdm.model.description.DescriptionElementSource;
+import eu.etaxonomy.cdm.model.description.Feature;
+import eu.etaxonomy.cdm.model.description.TaxonDescription;
+import eu.etaxonomy.cdm.model.description.TextData;
+import eu.etaxonomy.cdm.model.name.BotanicalName;
+import eu.etaxonomy.cdm.model.name.HomotypicalGroup;
+import eu.etaxonomy.cdm.model.name.NonViralName;
+import eu.etaxonomy.cdm.model.name.TaxonNameBase;
+import eu.etaxonomy.cdm.model.taxon.Synonym;
+import eu.etaxonomy.cdm.model.taxon.Taxon;
+import eu.etaxonomy.cdm.model.taxon.TaxonNode;
+import eu.etaxonomy.taxeditor.editor.name.operation.CreateSynonymInExistingHomotypicalGroupOperation;
+import eu.etaxonomy.taxeditor.store.CdmStore;
+
+/**
+ * @author cmathew
+ * @date 3 Feb 2015
+ *
+ */
+
+@DataSet
+public class TaxonNameEditorTest extends BaseOperationTest {
+
+ private static final Logger logger = Logger.getLogger(TaxonNameEditorTest.class);
+
+ ITaxonNodeService taxonNodeService = getRemoteApplicationController().getTaxonNodeService();
+ ITaxonService taxonService = getRemoteApplicationController().getTaxonService();
+ IClassificationService classificationService = getRemoteApplicationController().getClassificationService();
+
+ Language english = Language.getLanguageFromUuid(Language.uuidEnglish);
+
+
+ @Test
+ public void testAddHomotypicSynonym() throws ExecutionException {
+ UUID taxonNodeUuid = UUID.fromString("ce54c396-3694-47f2-abb0-1d7b7e057985");
+
+ TaxonNode taxonNode = taxonNodeService.load(taxonNodeUuid);
+ Taxon taxon = taxonNode.getTaxon();
+ HomotypicalGroup group = taxon.getHomotypicGroup();
+ BotanicalName newSynonymName = BotanicalName.NewInstance(null);
+ newSynonymName.setTitleCache("New Synonym", true);
+ operation = new CreateSynonymInExistingHomotypicalGroupOperation("Create Synonym In Existing Homotypical Group",
+ undoContext, taxon, group, newSynonymName, postOperation);
+
+ operation.execute(monitor, info);
+ taxonNodeService.merge(taxonNode);
+ Assert.assertEquals(taxon.getHomotypicGroup().getTypifiedNames().size(), 2);
+ Assert.assertEquals(taxon.getSynonyms().size(), 1);
+ Iterator<Synonym> synonymItr = taxon.getSynonyms().iterator();
+ Synonym synonym = synonymItr.next();
+ Assert.assertTrue(taxon.getHomotypicGroup().getTypifiedNames().contains(synonym.getName()));
+ }
+
+ @Test
+ public void addHeterotypicSynonym() throws ExecutionException {
+ UUID taxonNodeUuid = UUID.fromString("ce54c396-3694-47f2-abb0-1d7b7e057985");
+
+ TaxonNode taxonNode = taxonNodeService.load(taxonNodeUuid);
+ Taxon taxon = taxonNode.getTaxon();
+ HomotypicalGroup group = taxon.getHomotypicGroup();
+ BotanicalName newSynonymName = BotanicalName.NewInstance(null);
+ newSynonymName.setTitleCache("New Synonym", true);
+ operation = new CreateSynonymInExistingHomotypicalGroupOperation("Create Synonym In Existing Homotypical Group",
+ undoContext, taxon, group, newSynonymName, postOperation);
+
+ operation.execute(monitor, info);
+ taxonNodeService.merge(taxonNode);
+
+
+ }
+
+ @Test
+ public void addDeleteAddHomotypicSynonym() throws ExecutionException {
+ UUID taxonNodeUuid = UUID.fromString("ce54c396-3694-47f2-abb0-1d7b7e057985");
+
+ TaxonNode taxonNode = taxonNodeService.load(taxonNodeUuid);
+ Taxon taxon = taxonNode.getTaxon();
+ HomotypicalGroup group = taxon.getHomotypicGroup();
+ BotanicalName newSynonymName = BotanicalName.NewInstance(null);
+ newSynonymName.setTitleCache("New Synonym", true);
+ operation = new CreateSynonymInExistingHomotypicalGroupOperation("Create Synonym In Existing Homotypical Group",
+ undoContext, taxon, group, newSynonymName, postOperation);
+
+ operation.execute(monitor, info);
+ taxonNodeService.merge(taxonNode);
+ Assert.assertEquals(taxon.getHomotypicGroup().getTypifiedNames().size(), 2);
+
+ Set<Synonym> synonyms = taxon.getSynonyms();
+ for(Synonym synonym : synonyms) {
+ taxonService.deleteSynonym(synonym.getUuid(), taxon.getUuid(), null);
+ }
+
+ taxonNodeService.merge(taxonNode);
+
+ newSynonymName = BotanicalName.NewInstance(null);
+ newSynonymName.setTitleCache("Another New Synonym", true);
+ operation = new CreateSynonymInExistingHomotypicalGroupOperation("Create Synonym In Existing Homotypical Group",
+ undoContext, taxon, group, newSynonymName, postOperation);
+
+ operation.execute(monitor, info);
+ taxonNodeService.merge(taxonNode);
+ }
+
+ @Test
+ public void swapSynonymWithAcceptedTaxon() throws ExecutionException {
+ List<TaxonNode> rootEntities = new ArrayList<TaxonNode>();
+ UUID taxonNodeUuid = UUID.fromString("d425a971-1abe-4895-9e1f-1e5c8ff1c84c");
+ TaxonNode taxonNode = taxonNodeService.load(taxonNodeUuid);
+ rootEntities.add(taxonNode);
+
+ UUID taxonUuid = UUID.fromString("9763e5f0-6cd4-4d96-b8a4-4420854f7727");
+ Taxon taxon = (Taxon)taxonService.load(taxonUuid);
+ TaxonNameBase taxonName = taxon.getName();
+
+ UUID synonymUuid = UUID.fromString("1eb173bd-b174-4162-8ff5-5136d8f1e746");
+ Synonym synonym = (Synonym)taxonService.load(synonymUuid);
+ TaxonNameBase synonymName = synonym.getName();
+
+ taxonService.swapSynonymAndAcceptedTaxon(synonym.getUuid(), taxon.getUuid());
+
+ Assert.assertEquals(taxonName, synonym.getName());
+ Assert.assertEquals(synonymName, taxon.getName());
+ }
+
+ @Test
+ public void addTaxon() {
+ NonViralName taxonName = NonViralName.NewInstance(null);
+ Taxon taxon = Taxon.NewInstance(taxonName, null);
+ taxonService.merge(taxon);
+ }
+
+ @Ignore
+ @Test
+ public void addDescription() {
+ UUID taxonNodeUuid = UUID.fromString("ce54c396-3694-47f2-abb0-1d7b7e057985");
+
+ TaxonNode taxonNode = taxonNodeService.load(taxonNodeUuid);
+ Taxon taxon = taxonNode.getTaxon();
+ TaxonDescription description = TaxonDescription.NewInstance(taxon);
+
+
+ TextData textData = TextData.NewInstance();
+
+ textData.setFeature(Feature.ECOLOGY());
+ description.addElement(textData);
+
+ DescriptionElementSource descriptionElementSource = DescriptionElementSource.NewInstance(OriginalSourceType.PrimaryTaxonomicSource);
+ textData.addSource(descriptionElementSource);
+
+
+ CdmStore.getService(ITaxonNodeService.class).merge(taxonNode);
+
+ description.getId();
+ }
+
+
+ @Test
+ public void addTaxonNodeCascadeProblem() {
+ UUID taxonNodeUuid = UUID.fromString("ce54c396-3694-47f2-abb0-1d7b7e057985");
+
+ TaxonNode taxonNode = taxonNodeService.load(taxonNodeUuid);
+ Taxon childTaxon = Taxon.NewInstance(null, null);
+ TaxonNode childTaxonNode = taxonNode.addChildTaxon(childTaxon, null, null);
+ Taxon grandChildTaxon = Taxon.NewInstance(null, null);
+ TaxonNode grandChildTaxonNode = childTaxonNode.addChildTaxon(grandChildTaxon, null, null);
+
+ CdmStore.getService(ITaxonNodeService.class).merge(taxonNode,true);
+
+ Assert.assertEquals(taxonNode.getChildNodes().get(0).getId(), childTaxonNode.getId());
+
+ Assert.assertTrue(childTaxonNode.treeIndex() != null);
+ Assert.assertEquals(taxonNode.getChildNodes().get(0).treeIndex(), childTaxonNode.treeIndex());
+ Assert.assertFalse(childTaxon.getId() == 0);
+ Assert.assertEquals(taxonNode.getChildNodes().get(0).getTaxon().getId(), childTaxon.getId());
+
+ Assert.assertTrue(grandChildTaxonNode.treeIndex() != null);
+ Assert.assertEquals(taxonNode.getChildNodes().get(0).getChildNodes().get(0).getId(), grandChildTaxonNode.getId());
+ Assert.assertFalse(grandChildTaxon.getId() == 0);
+ Assert.assertEquals(taxonNode.getChildNodes().get(0).getChildNodes().get(0).getTaxon().getId(), grandChildTaxon.getId());
+ }
+
+}
+
--- /dev/null
+// $Id$
+/**
+ * Copyright (C) 2015 EDIT
+ * European Distributed Institute of Taxonomy
+ * http://www.e-taxonomy.eu
+ *
+ * The contents of this file are subject to the Mozilla Public License Version 1.1
+ * See LICENSE.TXT at the top of this package for the full license terms.
+ */
+package eu.etaxonomy.taxeditor.operation;
+
+import java.util.ArrayList;
+import java.util.HashSet;
+import java.util.List;
+import java.util.Set;
+import java.util.UUID;
+
+import org.apache.log4j.Logger;
+import org.eclipse.core.commands.ExecutionException;
+import org.junit.Assert;
+import org.junit.Test;
+import org.unitils.dbunit.annotation.DataSet;
+
+import eu.etaxonomy.cdm.api.service.IClassificationService;
+import eu.etaxonomy.cdm.api.service.ITaxonNodeService;
+import eu.etaxonomy.cdm.api.service.ITaxonService;
+import eu.etaxonomy.cdm.api.service.config.TaxonDeletionConfigurator;
+import eu.etaxonomy.cdm.api.service.config.TaxonNodeDeletionConfigurator;
+import eu.etaxonomy.cdm.api.service.config.TaxonNodeDeletionConfigurator.ChildHandling;
+import eu.etaxonomy.cdm.model.common.CdmBase;
+import eu.etaxonomy.cdm.model.common.Language;
+import eu.etaxonomy.cdm.model.description.TaxonDescription;
+import eu.etaxonomy.cdm.model.name.TaxonNameBase;
+import eu.etaxonomy.cdm.model.taxon.Classification;
+import eu.etaxonomy.cdm.model.taxon.ITaxonTreeNode;
+import eu.etaxonomy.cdm.model.taxon.Taxon;
+import eu.etaxonomy.cdm.model.taxon.TaxonNode;
+import eu.etaxonomy.taxeditor.navigation.navigator.operation.RemotingChangeAcceptedTaxonToSynonymOperation;
+import eu.etaxonomy.taxeditor.navigation.navigator.operation.RemotingDeleteTaxonNodeOperation;
+import eu.etaxonomy.taxeditor.navigation.navigator.operation.RemotingMoveFactualDataOperation;
+import eu.etaxonomy.taxeditor.navigation.navigator.operation.RemotingMoveTaxonOperation;
+
+/**
+ * @author cmathew
+ * @date 9 Mar 2015
+ *
+ */
+@DataSet
+public class TaxonNavigatorTest extends BaseOperationTest {
+
+ private static final Logger logger = Logger.getLogger(TaxonNameEditorTest.class);
+
+ ITaxonNodeService taxonNodeService = getRemoteApplicationController().getTaxonNodeService();
+ ITaxonService taxonService = getRemoteApplicationController().getTaxonService();
+ IClassificationService classificationService = getRemoteApplicationController().getClassificationService();
+
+ Language english = Language.getLanguageFromUuid(Language.uuidEnglish);
+
+
+
+ @Test
+ public void testChangeAcceptedTaxonToSynonym() throws ExecutionException {
+
+
+ UUID oldTaxonNodeNodeUuid = UUID.fromString("b85b5b78-6760-409f-ac91-bb89e95ff2a1");
+ UUID newAcceptedTaxonNodeUuid = UUID.fromString("6ad8e9e2-f5f6-41ad-aa30-f62a903650db");
+
+ TaxonNode oldTaxonNode = taxonNodeService.load(oldTaxonNodeNodeUuid);
+ TaxonNameBase name = oldTaxonNode.getTaxon().getName();
+
+
+ TaxonNode newAcceptedTaxonNode = taxonNodeService.load(newAcceptedTaxonNodeUuid);
+ int countTargetSynonyms = newAcceptedTaxonNode.getTaxon().getSynonyms().size();
+ sessionOwner.addExpectedUpdatedObject(oldTaxonNode.getParent());
+ sessionOwner.addExpectedUpdatedObject(newAcceptedTaxonNode);
+
+ operation = new RemotingChangeAcceptedTaxonToSynonymOperation(sessionOwner,
+ false,
+ oldTaxonNode.getUuid(),
+ newAcceptedTaxonNode.getUuid());
+ operation.execute(monitor, info);
+ newAcceptedTaxonNode = taxonNodeService.load(newAcceptedTaxonNodeUuid);
+ oldTaxonNode = taxonNodeService.load(oldTaxonNodeNodeUuid);
+ Assert.assertNull(oldTaxonNode);
+ Assert.assertEquals(countTargetSynonyms + 1,newAcceptedTaxonNode.getTaxon().getSynonyms().size());
+ Assert.assertEquals(name, newAcceptedTaxonNode.getTaxon().getSynonyms().iterator().next().getName());
+
+
+ }
+
+ @Test
+ public void testMoveTaxon() throws ExecutionException {
+
+ UUID taxonNodeToMoveUuid = UUID.fromString("b8439f51-6b96-445a-b401-7a836ba1cf58");
+ UUID newParentTreeNodeUuid = UUID.fromString("2f05d429-632d-4230-b9cb-70299360b470");
+ boolean moveToParentNode = true;
+
+ TaxonNode taxonNodeToMove = taxonNodeService.load(taxonNodeToMoveUuid);
+ TaxonNode oldParent = taxonNodeToMove.getParent();
+ sessionOwner.addExpectedUpdatedObject(oldParent);
+ int childCount = oldParent.getCountChildren();
+ TaxonNode newParentTreeNode = taxonNodeService.load(newParentTreeNodeUuid);
+ sessionOwner.addExpectedUpdatedObject(newParentTreeNode);
+ operation = new RemotingMoveTaxonOperation(sessionOwner,
+ false,
+ taxonNodeToMove.getUuid(),
+ newParentTreeNode.getUuid(),
+ moveToParentNode);
+ operation.execute(monitor, info);
+ Assert.assertEquals(childCount-1, oldParent.getCountChildren());
+ Assert.assertTrue(!oldParent.getChildNodes().contains(taxonNodeToMove));
+ Assert.assertTrue(newParentTreeNode.getChildNodes().contains(taxonNodeToMove));
+ }
+
+ @Test
+ public void testMoveFactualData() throws ExecutionException {
+ UUID sourceTaxonUuid = UUID.fromString("e40854d7-143f-4054-b229-6ed4cedb4bff");
+ UUID targetTaxonUuid = UUID.fromString("b8402dc4-5050-4882-a147-01b71e0e47d6");
+
+ Taxon sourceTaxon = CdmBase.deproxy(taxonService.load(sourceTaxonUuid), Taxon.class);
+ Set<TaxonDescription> sourceDescriptions = new HashSet(sourceTaxon.getDescriptions());
+ sessionOwner.addExpectedUpdatedObject(sourceTaxon);
+
+ Taxon targetTaxon = CdmBase.deproxy(taxonService.load(targetTaxonUuid), Taxon.class);
+ int countTargetDescriptions = targetTaxon.getDescriptions().size();
+ sessionOwner.addExpectedUpdatedObject(targetTaxon);
+
+ operation = new RemotingMoveFactualDataOperation(sessionOwner,
+ false,
+ sourceTaxonUuid,
+ targetTaxonUuid);
+ operation.execute(monitor, info);
+ Assert.assertEquals(0, sourceTaxon.getDescriptions().size());
+ Assert.assertEquals(sourceDescriptions.size() + countTargetDescriptions, targetTaxon.getDescriptions().size());
+ Assert.assertTrue(targetTaxon.getDescriptions().containsAll(sourceDescriptions));
+ }
+
+ @Test
+ public void testDeleteTaxonNodeWithDeleteChildren() throws ExecutionException {
+ UUID taxonNodeUuid = UUID.fromString("2f05d429-632d-4230-b9cb-70299360b470");
+ TaxonNode taxonNode = taxonNodeService.load(taxonNodeUuid);
+ List<TaxonNode> childNodes = taxonNode.getChildNodes();
+ List<UUID> childNodeUuids = new ArrayList<UUID>();
+ for(TaxonNode childNode : childNodes) {
+ childNodeUuids.add(childNode.getUuid());
+ }
+ Assert.assertTrue(taxonNode.getCountChildren() > 0);
+
+ Set<ITaxonTreeNode> nodes = new HashSet<ITaxonTreeNode>();
+ nodes.add(taxonNode);
+
+ TaxonNodeDeletionConfigurator configNodes = new TaxonNodeDeletionConfigurator();
+ configNodes.setChildHandling(ChildHandling.DELETE);
+ TaxonDeletionConfigurator config = new TaxonDeletionConfigurator();
+ config.setTaxonNodeConfig(configNodes);
+
+ sessionOwner.addExpectedUpdatedObject(taxonNode.getParent());
+
+ operation = new RemotingDeleteTaxonNodeOperation(sessionOwner,
+ false,
+ nodes,
+ config);
+ operation.execute(monitor, info);
+ TaxonNode reloadedNode = taxonNodeService.load(taxonNode.getUuid());
+ Assert.assertNull(reloadedNode);
+ for(UUID childNodeUuid : childNodeUuids) {
+ TaxonNode reloadedChildNode = taxonNodeService.load(childNodeUuid);
+ Assert.assertNull(reloadedChildNode);
+ }
+ }
+
+ @Test
+ public void testDeleteTaxonNodes() throws ExecutionException {
+ UUID taxonNode1Uuid = UUID.fromString("99f03b56-67cd-4e01-9ceb-2362d48f9d07");
+ UUID taxonNode2Uuid = UUID.fromString("91698cec-615f-4472-9002-feda1a6acded");
+ UUID taxonNode3Uuid = UUID.fromString("4fe03763-b966-4361-8334-352f6f777588");
+
+ TaxonNode taxonNode1 = taxonNodeService.load(taxonNode1Uuid);
+ TaxonNode taxonNode2 = taxonNodeService.load(taxonNode2Uuid);
+ TaxonNode taxonNode3 = taxonNodeService.load(taxonNode3Uuid);
+
+ Set<ITaxonTreeNode> nodes = new HashSet<ITaxonTreeNode>();
+ nodes.add(taxonNode1);
+ nodes.add(taxonNode2);
+ nodes.add(taxonNode3);
+
+ TaxonDeletionConfigurator config = new TaxonDeletionConfigurator();
+
+
+ sessionOwner.addExpectedUpdatedObject(taxonNode1.getParent());
+ sessionOwner.addExpectedUpdatedObject(taxonNode2.getParent());
+ sessionOwner.addExpectedUpdatedObject(taxonNode3.getParent());
+ operation = new RemotingDeleteTaxonNodeOperation(sessionOwner,
+ false,
+ nodes,
+ config);
+ operation.execute(monitor, info);
+ TaxonNode reloadedNode1 = taxonNodeService.load(taxonNode1.getUuid());
+ TaxonNode reloadedNode2 = taxonNodeService.load(taxonNode2.getUuid());
+ TaxonNode reloadedNode3 = taxonNodeService.load(taxonNode3.getUuid());
+ Assert.assertNull(reloadedNode1);
+ Assert.assertNull(reloadedNode2);
+ Assert.assertNull(reloadedNode3);
+
+ }
+
+ @Test
+ public void testDeleteTaxonNodeWithMovingChildrenToParentNode() throws ExecutionException {
+ UUID taxonNodeUuid = UUID.fromString("2f05d429-632d-4230-b9cb-70299360b470");
+ TaxonNode taxonNode = taxonNodeService.load(taxonNodeUuid);
+ TaxonNode parentTaxonNode = taxonNode.getParent();
+ List<TaxonNode> childNodes = taxonNode.getChildNodes();
+ List<UUID> childNodeUuids = new ArrayList<UUID>();
+ for(TaxonNode childNode : childNodes) {
+ childNodeUuids.add(childNode.getUuid());
+ }
+ Assert.assertTrue(taxonNode.getCountChildren() > 0);
+
+ Set<ITaxonTreeNode> nodes = new HashSet<ITaxonTreeNode>();
+ nodes.add(taxonNode);
+
+ TaxonNodeDeletionConfigurator configNodes = new TaxonNodeDeletionConfigurator();
+ configNodes.setChildHandling(ChildHandling.MOVE_TO_PARENT);
+ TaxonDeletionConfigurator config = new TaxonDeletionConfigurator();
+ config.setTaxonNodeConfig(configNodes);
+
+ sessionOwner.addExpectedUpdatedObject(taxonNode.getParent());
+ operation = new RemotingDeleteTaxonNodeOperation(sessionOwner,
+ false,
+ nodes,
+ config);
+ operation.execute(monitor, info);
+ TaxonNode reloadedNode = taxonNodeService.load(taxonNode.getUuid());
+ Assert.assertNull(reloadedNode);
+ List<TaxonNode> parentChildNodes = parentTaxonNode.getChildNodes();
+ List<UUID> parentChildNodeUuids = new ArrayList<UUID>();
+ for(TaxonNode parentChildNode : parentChildNodes) {
+ parentChildNodeUuids.add(parentChildNode.getUuid());
+ }
+ parentChildNodeUuids.containsAll(childNodeUuids);
+
+ }
+
+ @Test
+ @DataSet("TaxonNavigatorTest.testDeleteClassificationWithDeleteChildren.xml")
+ public void testDeleteClassificationWithDeleteChildren() throws ExecutionException {
+ UUID classificationUuid = UUID.fromString("0c2b5d25-7b15-4401-8b51-dd4be0ee5cab");
+ Classification classification = classificationService.load(classificationUuid);
+ TaxonNode rootNode = classification.getRootNode();
+ Set<ITaxonTreeNode> nodes = new HashSet<ITaxonTreeNode>();
+ nodes.add(classification);
+
+ TaxonNodeDeletionConfigurator configNodes = new TaxonNodeDeletionConfigurator();
+ configNodes.setChildHandling(ChildHandling.DELETE);
+ TaxonDeletionConfigurator config = new TaxonDeletionConfigurator();
+ config.setTaxonNodeConfig(configNodes);
+
+ operation = new RemotingDeleteTaxonNodeOperation(sessionOwner,
+ false,
+ nodes,
+ config);
+ operation.execute(monitor, info);
+
+ Classification reloadedClassification = classificationService.load(classification.getUuid());
+ Assert.assertNull(reloadedClassification);
+ TaxonNode reloadedRootNode = taxonNodeService.load(rootNode.getUuid());
+ Assert.assertNull(reloadedRootNode);
+
+ }
+
+
+}
--- /dev/null
+// $Id$
+/**
+* Copyright (C) 2015 EDIT
+* European Distributed Institute of Taxonomy
+* http://www.e-taxonomy.eu
+*
+* The contents of this file are subject to the Mozilla Public License Version 1.1
+* See LICENSE.TXT at the top of this package for the full license terms.
+*/
+package eu.etaxonomy.taxeditor.service;
+
+import java.io.FileOutputStream;
+import java.io.IOException;
+import java.util.HashSet;
+import java.util.List;
+import java.util.UUID;
+
+import org.junit.Assert;
+import org.junit.Test;
+import org.unitils.dbunit.annotation.DataSet;
+
+import eu.etaxonomy.cdm.api.application.CdmApplicationState;
+import eu.etaxonomy.cdm.api.service.INameService;
+import eu.etaxonomy.cdm.io.common.ExportResult;
+import eu.etaxonomy.cdm.io.csv.caryophyllales.out.CsvNameExportConfigurator;
+import eu.etaxonomy.cdm.io.csv.redlist.demo.CsvDemoExportConfigurator;
+import eu.etaxonomy.cdm.io.jaxb.JaxbExportConfigurator;
+import eu.etaxonomy.cdm.io.sdd.out.SDDExportConfigurator;
+import eu.etaxonomy.cdm.io.service.IIOService;
+import eu.etaxonomy.taxeditor.httpinvoker.BaseRemotingTest;
+
+/**
+ * @author cmathew
+ * @date 31 Jul 2015
+ *
+ */
+@DataSet
+public class IOServiceExportTest extends BaseRemotingTest {
+
+ private final IIOService ioService = CdmApplicationState.getIOService();
+ private final INameService nameService = CdmApplicationState.getCurrentAppConfig().getNameService();
+
+ @Test
+ public void exportJaxbTest() throws IOException {
+ JaxbExportConfigurator config = JaxbExportConfigurator.NewInstance(null, null);
+ ExportResult result = ioService.export(config);
+ List<byte[]> dataList = result.getExportData();
+ Assert.assertEquals(1, dataList.size());
+ byte[] exportData = dataList.get(0);
+ String savePath = "target/exportjaxb.xml";
+ FileOutputStream stream = null;
+
+ stream = new FileOutputStream(savePath);
+ stream.write(exportData);
+ stream.close();
+ }
+
+ @Test
+ public void exportSDDTest() throws IOException {
+ SDDExportConfigurator config = SDDExportConfigurator.NewInstance(null, null, null);
+ ExportResult result = ioService.export(config);
+ List<byte[]> dataList = result.getExportData();
+ Assert.assertEquals(1, dataList.size());
+ byte[] exportData = dataList.get(0);
+ String savePath = "target/exportsdd.xml";
+ FileOutputStream stream = null;
+
+ stream = new FileOutputStream(savePath);
+ stream.write(exportData);
+ stream.close();
+
+ }
+
+ @Test
+ public void exportCSVTest() throws IOException {
+ HashSet<UUID> set = new HashSet<UUID>();
+ set.add(UUID.fromString("0c2b5d25-7b15-4401-8b51-dd4be0ee5cab"));
+ CsvDemoExportConfigurator config = CsvDemoExportConfigurator.NewInstance(null, null);
+ config.setClassificationUuids(set);
+ config.setDoTaxa(true);
+ config.setHasHeaderLines(true);
+ config.setClassification(true);
+ config.setTaxonName(true);
+ config.setAuthor(true);
+ config.setRank(true);
+ config.setLastChange(true);
+
+ ExportResult result = ioService.export(config);
+ List<byte[]> dataList = result.getExportData();
+ Assert.assertEquals(1, dataList.size());
+ byte[] exportData = dataList.get(0);
+ String savePath = "target/exportcsv.xml";
+ saveToFile(savePath, exportData);
+ }
+
+ @Test
+ public void exportCSVNameTest() throws IOException {
+ CsvNameExportConfigurator config = CsvNameExportConfigurator.NewInstance(null,null);
+ ExportResult result = ioService.export(config);
+ List<byte[]> dataList = result.getExportData();
+ Assert.assertEquals(1, dataList.size());
+ byte[] exportData = dataList.get(0);
+ String savePath = "target/exportcsvname.xml";
+ saveToFile(savePath, exportData);
+ }
+
+ @Test
+ public void exportCSVPrintTest() throws IOException {
+ CsvNameExportConfigurator config = CsvNameExportConfigurator.NewInstance(null,null);
+ config.setNamesOnly(false);
+ config.setClassificationUUID(UUID.fromString("0c2b5d25-7b15-4401-8b51-dd4be0ee5cab"));
+ ExportResult result = ioService.export(config);
+ List<byte[]> dataList = result.getExportData();
+ Assert.assertEquals(1, dataList.size());
+ byte[] exportData = dataList.get(0);
+ String savePath = "target/exportcsvprint.xml";
+ saveToFile(savePath, exportData);
+ }
+
+ private static void saveToFile(String filePath, byte[] data) throws IOException {
+ FileOutputStream stream = null;
+ stream = new FileOutputStream(filePath);
+ stream.write(data);
+ stream.close();
+ }
+}
--- /dev/null
+// $Id$
+/**
+* Copyright (C) 2015 EDIT
+* European Distributed Institute of Taxonomy
+* http://www.e-taxonomy.eu
+*
+* The contents of this file are subject to the Mozilla Public License Version 1.1
+* See LICENSE.TXT at the top of this package for the full license terms.
+*/
+package eu.etaxonomy.taxeditor.service;
+
+import java.io.FileNotFoundException;
+import java.io.FileOutputStream;
+import java.io.IOException;
+import java.nio.file.Files;
+import java.nio.file.Path;
+import java.nio.file.Paths;
+import java.util.List;
+
+import org.junit.Assert;
+import org.junit.Ignore;
+import org.junit.Test;
+import org.unitils.dbunit.annotation.DataSet;
+
+import eu.etaxonomy.cdm.api.application.CdmApplicationState;
+import eu.etaxonomy.cdm.api.service.INameService;
+import eu.etaxonomy.cdm.api.service.IOccurrenceService;
+import eu.etaxonomy.cdm.database.DbSchemaValidation;
+import eu.etaxonomy.cdm.io.common.IImportConfigurator.SOURCE_TYPE;
+import eu.etaxonomy.cdm.io.common.ImportResult;
+import eu.etaxonomy.cdm.io.excel.taxa.NormalExplicitImportConfigurator;
+import eu.etaxonomy.cdm.io.sdd.in.SDDImportConfigurator;
+import eu.etaxonomy.cdm.io.service.IIOService;
+import eu.etaxonomy.cdm.io.specimen.abcd206.in.Abcd206ImportConfigurator;
+import eu.etaxonomy.cdm.io.specimen.excel.in.SpecimenCdmExcelImportConfigurator;
+import eu.etaxonomy.cdm.io.tcsxml.in.TcsXmlImportConfigurator;
+import eu.etaxonomy.cdm.model.name.NomenclaturalCode;
+import eu.etaxonomy.cdm.model.name.TaxonNameBase;
+import eu.etaxonomy.taxeditor.httpinvoker.BaseRemotingTest;
+
+/**
+ *
+ * Note : One issue with this test class is that when the tests are run a second time
+ * against the same server there are errors due to the fact that not all the imported data is deleted.
+ * This needs to be fixed
+ * @author cmathew
+ * @date 5 Aug 2015
+ *
+ */
+@Ignore // seems to cause problems with other tests due to data not deleted
+@DataSet
+public class IOServiceImportTest extends BaseRemotingTest {
+
+ private final IIOService ioService = CdmApplicationState.getIOService();
+ private final INameService nameService = CdmApplicationState.getCurrentAppConfig().getNameService();
+ private final IOccurrenceService occurrenceService = CdmApplicationState.getCurrentAppConfig().getOccurrenceService();
+
+ @Test
+ public void importNormalExplicit() throws IOException {
+ String importFilePath = "src/test/resources/imports/NormalExplicitImport.xls";
+ NormalExplicitImportConfigurator config =
+ NormalExplicitImportConfigurator.NewInstance(null, null, null, null);
+ config.setNomenclaturalCode(NomenclaturalCode.ICNB);
+ config.setDbSchemaValidation(DbSchemaValidation.CREATE);
+ ImportResult result = ioService.importData(config, fileToByteArray(importFilePath), SOURCE_TYPE.URI);
+ Assert.assertTrue(result.isSuccess());
+ List<TaxonNameBase> list = nameService.list(TaxonNameBase.class, null, null, null, null);
+ Assert.assertEquals(9,list.size());
+ }
+
+
+ @Test
+ public void importAbcd() throws IOException {
+ String importFilePath = "src/test/resources/imports/ABCDImport.xml";
+ Abcd206ImportConfigurator config =
+ Abcd206ImportConfigurator.NewInstance(null, null);
+ config.setNomenclaturalCode(NomenclaturalCode.ICNB);
+ config.setDbSchemaValidation(DbSchemaValidation.CREATE);
+ ImportResult result = ioService.importData(config, fileToByteArray(importFilePath), SOURCE_TYPE.INPUTSTREAM);
+ Assert.assertTrue(result.isSuccess());
+ Assert.assertTrue(!result.getReports().isEmpty());
+ saveToFile("target/importAbcdReport.txt", result.getReports().get(0));
+ List<TaxonNameBase> list = nameService.list(TaxonNameBase.class, null, null, null, null);
+ Assert.assertEquals(2,list.size());
+ }
+
+ @Test
+ public void importSDD() throws IOException {
+ String importFilePath = "src/test/resources/imports/SDD.xml";
+ SDDImportConfigurator config =
+ SDDImportConfigurator.NewInstance(null, null);
+ config.setNomenclaturalCode(NomenclaturalCode.ICNB);
+ config.setDbSchemaValidation(DbSchemaValidation.CREATE);
+ ImportResult result = ioService.importData(config, fileToByteArray(importFilePath), SOURCE_TYPE.URI);
+ Assert.assertTrue(result.isSuccess());
+ List<TaxonNameBase> list = nameService.list(TaxonNameBase.class, null, null, null, null);
+ Assert.assertEquals(9,list.size());
+ }
+
+ @Test
+ public void importSpecimenExcel() throws IOException {
+ String importFilePath = "src/test/resources/imports/SpecimenExcelImport.xls";
+ SpecimenCdmExcelImportConfigurator config = SpecimenCdmExcelImportConfigurator.NewInstance(null, null);
+ config.setNomenclaturalCode(NomenclaturalCode.ICNB);
+ config.setDbSchemaValidation(DbSchemaValidation.CREATE);
+ ImportResult result = ioService.importData(config, fileToByteArray(importFilePath), SOURCE_TYPE.URI);
+ Assert.assertTrue(result.isSuccess());
+// List<SpecimenOrObservationBase> occurrences = occurrenceService.list(SpecimenOrObservationBase.class, null, null, null, null);
+// Assert.assertEquals(3,occurrences.size());
+ }
+
+ @Test
+ public void importTCS() throws IOException {
+ String importFilePath = "src/test/resources/imports/TcsImport.xml";
+ TcsXmlImportConfigurator config = TcsXmlImportConfigurator.NewInstance(null, null);
+ config.setNomenclaturalCode(NomenclaturalCode.ICNB);
+ config.setDbSchemaValidation(DbSchemaValidation.CREATE);
+ ImportResult result = ioService.importData(config, fileToByteArray(importFilePath), SOURCE_TYPE.URI);
+ Assert.assertTrue(result.isSuccess());
+ List<TaxonNameBase> list = nameService.list(TaxonNameBase.class, null, null, null, null);
+ Assert.assertEquals(16,list.size());
+ }
+
+ private byte[] fileToByteArray(String filePath) throws IOException {
+ Path path = Paths.get(filePath);
+ return Files.readAllBytes(path);
+ }
+
+ private static void saveToFile(String filePath, byte[] data) {
+ FileOutputStream stream = null;
+ try {
+ stream = new FileOutputStream(filePath);
+ stream.write(data);
+ } catch (FileNotFoundException e) {
+ e.printStackTrace();
+ } catch (IOException e) {
+ e.printStackTrace();
+ } finally {
+ try {
+ if(stream != null) {
+ stream.close();
+ }
+ } catch (IOException e) {
+ e.printStackTrace();
+ }
+ }
+ }
+
+}
--- /dev/null
+package eu.etaxonomy.taxeditor.service;
+
+import java.util.List;
+import java.util.UUID;
+
+import org.apache.log4j.Logger;
+import org.junit.Assert;
+import org.junit.Test;
+
+import eu.etaxonomy.cdm.api.application.CdmApplicationState;
+import eu.etaxonomy.cdm.api.cache.CdmServiceCacher;
+import eu.etaxonomy.cdm.api.service.ITermService;
+import eu.etaxonomy.cdm.model.common.DefinedTermBase;
+import eu.etaxonomy.cdm.model.common.Language;
+import eu.etaxonomy.cdm.model.common.TermType;
+import eu.etaxonomy.taxeditor.httpinvoker.RemotingSessionAwareTest;
+
+public class ServiceInterceptorTest extends RemotingSessionAwareTest {
+
+ private static final Logger logger = Logger.getLogger(ServiceInterceptorTest.class);
+ private final ITermService termService = getRemoteApplicationController().getTermService();
+ private static CdmServiceCacher cdmServiceCacher = CdmApplicationState.getCdmServiceCacher();
+
+
+ @Test
+ public void termServiceInterceptorTest() {
+ List<DefinedTermBase<?>> terms = termService.listByTermType(TermType.Language, null, null, null, null);
+ int cacheLanguageSize = 0;
+ List<UUID> keys = cdmServiceCacher.getDefaultCache().getKeys();
+ for(UUID key : keys) {
+ if(cdmServiceCacher.getFromCache(key).getClass().equals(Language.class)) {
+ cacheLanguageSize++;
+ }
+ }
+ Assert.assertEquals(terms.size(), cacheLanguageSize);
+ // TO DO : get the static termTypeMap from TermServiceRequestExecutor and check the size
+ }
+}
--- /dev/null
+// $Id$
+/**
+* Copyright (C) 2015 EDIT
+* European Distributed Institute of Taxonomy
+* http://www.e-taxonomy.eu
+*
+* The contents of this file are subject to the Mozilla Public License Version 1.1
+* See LICENSE.TXT at the top of this package for the full license terms.
+*/
+package eu.etaxonomy.taxeditor.session;
+
+import org.junit.Test;
+import org.springframework.util.Assert;
+import org.unitils.UnitilsJUnit4;
+
+import eu.etaxonomy.cdm.api.application.CdmApplicationState;
+
+/**
+ * @author cmathew
+ * @date 5 Oct 2015
+ *
+ */
+public class CdmApplicationStateTest extends UnitilsJUnit4 {
+
+ @Test
+ public void testCdmlibManifestInfoUpdate() {
+ CdmApplicationState.updateCdmlibManifestInfo();
+ Assert.notNull(CdmApplicationState.getCdmlibVersion());
+ Assert.notNull(CdmApplicationState.getCdmlibLastModified());
+ }
+}
--- /dev/null
+// $Id$
+/**
+ * Copyright (C) 2014 EDIT
+ * European Distributed Institute of Taxonomy
+ * http://www.e-taxonomy.eu
+ *
+ * The contents of this file are subject to the Mozilla Public License Version 1.1
+ * See LICENSE.TXT at the top of this package for the full license terms.
+ */
+package eu.etaxonomy.taxeditor.session;
+
+import java.util.ArrayList;
+import java.util.Iterator;
+import java.util.List;
+import java.util.Map;
+import java.util.Set;
+import java.util.UUID;
+
+import org.apache.log4j.Logger;
+import org.hibernate.collection.spi.PersistentCollection;
+import org.junit.Assert;
+import org.junit.BeforeClass;
+import org.junit.Ignore;
+import org.junit.Test;
+import org.unitils.dbunit.annotation.DataSet;
+
+import eu.etaxonomy.cdm.api.application.CdmApplicationState;
+import eu.etaxonomy.cdm.api.service.ICommonService;
+import eu.etaxonomy.cdm.api.service.IPolytomousKeyNodeService;
+import eu.etaxonomy.cdm.api.service.IPolytomousKeyService;
+import eu.etaxonomy.cdm.api.service.ITaxonService;
+import eu.etaxonomy.cdm.api.service.ITermService;
+import eu.etaxonomy.cdm.api.service.IUserService;
+import eu.etaxonomy.cdm.api.service.IVocabularyService;
+import eu.etaxonomy.cdm.model.agent.AgentBase;
+import eu.etaxonomy.cdm.model.agent.Person;
+import eu.etaxonomy.cdm.model.common.CdmBase;
+import eu.etaxonomy.cdm.model.common.Credit;
+import eu.etaxonomy.cdm.model.common.DefinedTermBase;
+import eu.etaxonomy.cdm.model.common.Extension;
+import eu.etaxonomy.cdm.model.common.IdentifiableSource;
+import eu.etaxonomy.cdm.model.common.Language;
+import eu.etaxonomy.cdm.model.common.LanguageString;
+import eu.etaxonomy.cdm.model.common.TermType;
+import eu.etaxonomy.cdm.model.common.TermVocabulary;
+import eu.etaxonomy.cdm.model.description.KeyStatement;
+import eu.etaxonomy.cdm.model.description.PolytomousKey;
+import eu.etaxonomy.cdm.model.description.PolytomousKeyNode;
+import eu.etaxonomy.cdm.model.media.Rights;
+import eu.etaxonomy.cdm.model.taxon.Taxon;
+import eu.etaxonomy.taxeditor.httpinvoker.RemotingSessionAwareTest;
+
+/**
+ * @author cmathew
+ * @date 7 Oct 2014
+ *
+ */
+@DataSet
+public class CdmEntitySessionAwareTest extends RemotingSessionAwareTest {
+
+ private static final Logger logger = Logger.getLogger(CdmEntitySessionAwareTest.class);
+
+ UUID polytomousKeyUuid = UUID.fromString("0d53ba20-7de4-4baa-bd8a-401048447d66");
+ UUID subKeyUuid = UUID.fromString("9d8bf4f6-a70a-4b80-8556-2ccfb436ff01");
+ //UUID polytomousKeyUuid = UUID.fromString("bab66772-2c83-428a-bb6d-655d12ac6097");
+ UUID taxon1Uuid = UUID.fromString("2b336df7-29e8-4f79-985f-66502739d22f");
+ UUID personUuid = UUID.fromString("945d08f2-eb92-45b6-9252-6275ea6d338b");
+
+
+
+ IPolytomousKeyService polytomousKeyService = getRemoteApplicationController().getPolytomousKeyService();
+ IPolytomousKeyNodeService polytomousKeyNodeService = getRemoteApplicationController().getPolytomousKeyNodeService();
+ ICommonService commonService = getRemoteApplicationController().getCommonService();
+ ITaxonService taxonService = getRemoteApplicationController().getTaxonService();
+ IVocabularyService vocabularyService = getRemoteApplicationController().getVocabularyService();
+ ITermService termService = getRemoteApplicationController().getTermService();
+ IUserService userService = getRemoteApplicationController().getUserService();
+
+ //Language english = Language.getLanguageFromUuid(Language.uuidEnglish);
+
+
+
+ @BeforeClass
+ public static void initializePolytomousKeyTest() {
+ }
+
+
+ @Test
+ public void readAllPolytomousKeys() {
+ List<PolytomousKey> pKeys = polytomousKeyService.list(PolytomousKey.class, null, null, null, null);
+ Iterator<PolytomousKey> pKeysItr = pKeys.iterator();
+ Assert.assertEquals(pKeysItr.next().getUuid(),UUID.fromString("9d8bf4f6-a70a-4b80-8556-2ccfb436ff01"));
+ Assert.assertEquals(pKeysItr.next().getUuid(),UUID.fromString("0d53ba20-7de4-4baa-bd8a-401048447d66"));
+ }
+
+
+ @Test
+ //@DataSet("PolytomousKeyTest.readPolytmousKeyData.xml")
+ public void readPolytmousKeyData() {
+ PolytomousKey pKey = CdmBase.deproxy(polytomousKeyService.find(polytomousKeyUuid),PolytomousKey.class);
+ Set<Taxon> taxonomicScope = pKey.getTaxonomicScope();
+ Iterator<Taxon> tsItr = taxonomicScope.iterator();
+ Taxon taxon = tsItr.next();
+
+ Assert.assertEquals("Achillea sec. Cyprus", taxon.getTitleCache());
+ Assert.assertEquals(tsItr.hasNext(), false);
+
+ List<Credit> credits = pKey.getCredits();
+ AgentBase agent = credits.get(0).getAgent();
+ Assert.assertEquals(agent.getId(),4809);
+ Assert.assertEquals(agent.getTitleCache(),"R. A. Graham");
+ Assert.assertEquals(credits.get(0).getText(),"Credits Text Test");
+
+ Set<Extension> exts = pKey.getExtensions();
+ Iterator<Extension> extItr = exts.iterator();
+ Extension ext = extItr.next();
+ Assert.assertEquals(ext.getValue(), "http://test.com");
+
+ Set<Rights> rights = pKey.getRights();
+ Iterator<Rights> rightsItr = rights.iterator();
+ Rights right = rightsItr.next();
+ Assert.assertEquals(right.getText(),"Rights Text Test");
+
+ Set<IdentifiableSource> sources = pKey.getSources();
+ Iterator<IdentifiableSource> sourcesItr = sources.iterator();
+ IdentifiableSource source = sourcesItr.next();
+ Assert.assertEquals(source.getId(), 23710);
+ source = sourcesItr.next();
+ Assert.assertEquals(source.getId(), 23711);
+
+ // TO DO : Added tests for Annotations , Markers
+ }
+
+
+
+ @Test
+ public void readPolytomousKeyDataFromNodes() {
+ PolytomousKey pKey = CdmBase.deproxy(polytomousKeyService.find(polytomousKeyUuid),PolytomousKey.class);
+ PolytomousKeyNode rootNode = pKey.getRoot();
+
+
+ Assert.assertEquals(rootNode.getId(), 2750);
+
+ Assert.assertEquals(rootNode.getChildAt(0).getId(), 2751);
+ Assert.assertEquals(rootNode.getChildAt(0).getParent().getId(), rootNode.getId());
+ Assert.assertEquals(rootNode.getKey().getId(), pKey.getId());
+ Integer sortIndex = (Integer)getFieldValueViaReflection(rootNode.getChildAt(0), "sortIndex");
+ Assert.assertEquals(sortIndex, new Integer(0));
+ String statement = "Capitula without ligulate ray-florets; leaves entire or subentire";
+ Assert.assertEquals(rootNode.getChildAt(0).getStatement().getLabelText(Language.ENGLISH()), statement);
+
+ Assert.assertEquals(rootNode.getChildAt(1).getId(), 2753);
+ Assert.assertEquals(rootNode.getChildAt(1).getParent().getId(), rootNode.getId());
+ Assert.assertEquals(rootNode.getChildAt(1).getKey().getId(), pKey.getId());
+ sortIndex = (Integer)getFieldValueViaReflection(rootNode.getChildAt(1), "sortIndex");
+ Assert.assertEquals(sortIndex, new Integer(1));
+ statement = "Capitula with ligulate ray-florets; leaves pinnatisect";
+ Assert.assertEquals(rootNode.getChildAt(1).getStatement().getLabelText(Language.ENGLISH()), statement);
+
+ Assert.assertEquals(rootNode.getChildAt(1).getChildAt(0).getId(), 2754);
+ Assert.assertEquals(rootNode.getChildAt(1).getChildAt(0).getParent().getId(), rootNode.getChildAt(1).getId());
+ Assert.assertEquals(rootNode.getChildAt(1).getChildAt(0).getKey().getId(), pKey.getId());
+ sortIndex = (Integer)getFieldValueViaReflection(rootNode.getChildAt(1).getChildAt(0), "sortIndex");
+ Assert.assertEquals(sortIndex, new Integer(0));
+ statement = "Ray-florets yellow";
+ Assert.assertEquals(rootNode.getChildAt(1).getChildAt(0).getStatement().getLabelText(Language.ENGLISH()), statement);
+ Assert.assertEquals(rootNode.getChildAt(1).getChildAt(0).getChildAt(0).getTaxon().getTitleCache(), "Achillea arabica Kotschy sec. Cyprus");
+ }
+
+ @Test
+ public void addGrandChildPolytomousKeyNode() {
+
+ PolytomousKey pKey = CdmBase.deproxy(polytomousKeyService.find(polytomousKeyUuid),PolytomousKey.class);
+ PolytomousKeyNode rootChildNode = pKey.getRoot().getChildAt(0);
+ PolytomousKeyNode grandChildNode = PolytomousKeyNode.NewInstance();
+ rootChildNode.addChild(grandChildNode);
+
+ polytomousKeyService.merge(pKey, true);
+ grandChildNode = pKey.getRoot().getChildAt(0).getChildAt(0);
+ Assert.assertTrue(0 != grandChildNode.getId());
+ KeyStatement ks = KeyStatement.NewInstance("test");
+ grandChildNode.setStatement(ks);
+ polytomousKeyService.merge(pKey, true);
+
+ //grandChildNode = pKey.getRoot().getChildAt(0).getChildAt(0);
+ //KeyStatement ks = grandChildNode.getStatement();
+ Assert.assertTrue(0 != ks.getId());
+
+ }
+
+ @Test
+ public void addGreatGrandChildPolytomousKeyNode() {
+
+ PolytomousKey pKey = CdmBase.deproxy(polytomousKeyService.find(polytomousKeyUuid),PolytomousKey.class);
+ PolytomousKeyNode rootChildNode = pKey.getRoot().getChildAt(0);
+ PolytomousKeyNode grandChildNode = PolytomousKeyNode.NewInstance();
+ rootChildNode.addChild(grandChildNode);
+
+
+ polytomousKeyNodeService.merge(grandChildNode);
+
+
+ Assert.assertFalse(pKey.getRoot().getChildAt(0).getChildAt(0).getId() == 0);
+ }
+
+ @Test
+ public void savePolytomousKeyNodeData() {
+ PolytomousKey pkey = CdmBase.deproxy(polytomousKeyService.find(polytomousKeyUuid),PolytomousKey.class);
+
+ PolytomousKeyNode pkeynode = pkey.getRoot();
+ String newQuestion = "New Question";
+ String newStatement = "New Statement";
+
+ Assert.assertEquals("Question 1",pkeynode.getQuestion().getLabel().get(Language.ENGLISH()).getText());
+ for(PolytomousKeyNode node : pkeynode.getChildren()) {
+
+ node.setQuestion(null);
+ node.setStatement(null);
+ }
+ //FIXME:Remoting Add tests for feature after fixing problem
+
+ //Feature feature = pkeynode.getFeature();
+ //Assert.assertEquals(feature.getTitleCache(),"Systematics");
+ //pkeynode.setFeature(null);
+
+ Assert.assertEquals(pkeynode.getChildAt(0).getModifyingText().get(Language.ENGLISH()).getText(),"Modifying Text 1a");
+ String modifyingText = "Modifying Text 1a updated";
+
+ //pkeynode.getChildAt(0).putModifyingText(Language.ENGLISH(), modifyingText);
+
+ Assert.assertEquals(pkeynode.getChildAt(0).getSubkey().getId(),751);
+ Assert.assertEquals("Asphodeline", pkeynode.getChildAt(0).getSubkey().getTitleCache());
+ Assert.assertNull(pkeynode.getChildAt(1).getTaxon());
+ Taxon taxon = CdmBase.deproxy(taxonService.find(taxon1Uuid),Taxon.class);
+ pkeynode.getChildAt(1).setTaxon(taxon);
+
+ polytomousKeyService.merge(pkey);
+
+ pkey = CdmBase.deproxy(polytomousKeyService.find(polytomousKeyUuid),PolytomousKey.class);
+
+
+ pkeynode = pkey.getRoot();
+ for(PolytomousKeyNode node : pkeynode.getChildren()) {
+ Assert.assertNull(node.getQuestion());
+ node.setQuestion(KeyStatement.NewInstance(Language.ENGLISH(),newQuestion));
+ Assert.assertNull(node.getStatement());
+ node.setStatement(KeyStatement.NewInstance(Language.ENGLISH(),newStatement));
+ }
+
+ Assert.assertEquals(pkeynode.getChildAt(1).getTaxon(), taxon);
+
+ polytomousKeyService.merge(pkey);
+
+ pkey = CdmBase.deproxy(polytomousKeyService.find(polytomousKeyUuid),PolytomousKey.class);
+
+ pkeynode = pkey.getRoot();
+ for(PolytomousKeyNode node : pkeynode.getChildren()) {
+ Assert.assertNotNull(node.getQuestion());
+ Map<Language, LanguageString> label = node.getQuestion().getLabel();
+ Assert.assertEquals(newQuestion, label.get(Language.ENGLISH()).getText());
+ Assert.assertNotNull(node.getStatement());
+ Assert.assertEquals(newStatement, node.getStatement().getLabel(Language.ENGLISH()).getText());
+ }
+ //Assert.assertEquals(pkeynode.getFeature().getId(), feature.getId());
+
+ }
+
+
+ @Test
+ public void savePolytomousKeyNodeDataWithSameSubKey() {
+
+ PolytomousKey pkey = CdmBase.deproxy(polytomousKeyService.find(polytomousKeyUuid),PolytomousKey.class);
+
+
+ PolytomousKeyNode pkeynode = pkey.getRoot();
+
+ PolytomousKey subkey1 = CdmBase.deproxy(pkeynode.getChildAt(0).getSubkey(), PolytomousKey.class);
+ String subkey1title = subkey1.getTitleCache();
+ subkey1.setTitleCache(subkey1title + "test", true);
+
+
+ PolytomousKey subkey2 = CdmBase.deproxy(pkeynode.getChildAt(1).getChildAt(0).getSubkey(), PolytomousKey.class);
+ String subkey2title = subkey2.getTitleCache();
+ subkey2.setTitleCache(subkey2title + "test", true);
+
+ Assert.assertSame(subkey1, subkey2);
+
+ polytomousKeyService.merge(pkey);
+ }
+
+ @Test
+ public void savePolytomousKeyNodeDataWithSameSubKeyUsingService() {
+
+ PolytomousKey pkey = CdmBase.deproxy(polytomousKeyService.find(polytomousKeyUuid),PolytomousKey.class);
+
+
+ PolytomousKeyNode pkeynode = pkey.getRoot();
+
+ PersistentCollection children = (PersistentCollection) pkeynode.getChildren();
+ PolytomousKeyNode childNode0 = (PolytomousKeyNode)commonService.get(pkeynode.getUuid(), "children", 0);
+ PolytomousKey subkey1 = CdmBase.deproxy(childNode0.getSubkey(),PolytomousKey.class);
+ String subkey1title = subkey1.getTitleCache();
+ subkey1.setTitleCache(subkey1title + "test", true);
+
+ PolytomousKeyNode childNode1 = (PolytomousKeyNode)commonService.get(pkeynode.getUuid(), "children", 1);
+ PolytomousKey subkey2 = CdmBase.deproxy(childNode1.getSubkey(),PolytomousKey.class);
+ String subkey2title = subkey2.getTitleCache();
+ subkey2.setTitleCache(subkey2title + "test", true);
+
+ Assert.assertNotSame(childNode0, childNode1);
+
+ Assert.assertSame(subkey1, subkey2);
+
+ polytomousKeyService.merge(pkey);
+ }
+
+
+
+ @Test
+ public void savePolytomousKeyNodeDataWithSameLanguageInLabel() {
+
+ PolytomousKey pkey = CdmBase.deproxy(polytomousKeyService.find(polytomousKeyUuid),PolytomousKey.class);
+ PolytomousKeyNode pkeynode = pkey.getRoot();
+
+ Map<Language, LanguageString> label1 = pkeynode.getQuestion().getLabel();
+ label1.size();
+
+
+ Map<Language, LanguageString> label2 = pkeynode.getChildAt(0).getStatement().getLabel();
+ label2.size();
+
+
+ polytomousKeyService.merge(pkey);
+ }
+
+ @Test
+ public void deleteSubKeyInPolytomousSubKeyWithoutInitializing() {
+ PolytomousKey pKey = CdmBase.deproxy(polytomousKeyService.find(polytomousKeyUuid),PolytomousKey.class);
+
+
+ PolytomousKeyNode rootNode = pKey.getRoot();
+ PolytomousKeyNode child = rootNode.getChildAt(0);
+ PolytomousKey subKey = child.getSubkey();
+
+ polytomousKeyService.delete(subKey.getUuid());
+
+ // retrieving subkey shows its null
+ subKey = CdmBase.deproxy(polytomousKeyService.find(subKeyUuid),PolytomousKey.class);
+ Assert.assertNull(subKey);
+
+ pKey = CdmBase.deproxy(polytomousKeyService.find(polytomousKeyUuid),PolytomousKey.class);
+
+
+ rootNode = pKey.getRoot();
+ child = rootNode.getChildAt(0);
+ subKey = child.getSubkey();
+ // subkey will not be null, because the delete functionality of the subkey
+ // does not currently delete it from a polytomous key node
+
+ // FIXME: With the new delete functionality this should be null, shouldn't it ?
+ Assert.assertNotNull(subKey);
+ }
+
+
+ @Test
+ public void deleteSubKeyInPolytomousNode() {
+ PolytomousKey pKey = CdmBase.deproxy(polytomousKeyService.find(polytomousKeyUuid),PolytomousKey.class);
+
+
+ PolytomousKeyNode rootNode = pKey.getRoot();
+ List<PolytomousKeyNode> children = rootNode.getChildren();
+ PolytomousKeyNode child = rootNode.getChildAt(0);
+ polytomousKeyNodeService.delete(child.getUuid(), true);
+
+ pKey = CdmBase.deproxy(polytomousKeyService.find(polytomousKeyUuid),PolytomousKey.class);
+
+ rootNode = pKey.getRoot();
+ children = rootNode.getChildren();
+ Assert.assertFalse(children.contains(child));
+ }
+
+ @Test
+ public void deleteSubKeyInPolytomousSubKeyAfterInitializing() {
+ PolytomousKey pKey = CdmBase.deproxy(polytomousKeyService.find(polytomousKeyUuid),PolytomousKey.class);
+
+
+ PolytomousKeyNode rootNode = pKey.getRoot();
+ PolytomousKeyNode child = rootNode.getChildAt(0);
+ PolytomousKey subKey = child.getSubkey();
+ // this call initializes the subkey
+ subKey.getRoot();
+
+ polytomousKeyService.delete(subKey);
+
+ // since subKey was initialized before the delete, it will be
+ // accesible even after the delete. This behaviour is similar
+ // to hibernate session delete where the deleted object is
+ // made transient, but not deleted from the object graph
+
+ PolytomousKeyNode subKeyRootNode = subKey.getRoot();
+ Assert.assertNotNull(subKey);
+ }
+
+ @Test
+ public void saveNewTermVocabulary() {
+ TermVocabulary termVocabulary =
+ TermVocabulary.NewInstance(TermType.Feature,
+ null,
+ "Untitled",
+ null,
+ null);
+ try {
+ List<TermVocabulary<DefinedTermBase>> vocabularies = vocabularyService.findByTermType(TermType.Feature);
+
+ for(TermVocabulary vocab : vocabularies) {
+ vocab.getTermsOrderedByLabels(Language.ENGLISH());
+ }
+
+ termVocabulary = vocabularyService.merge(termVocabulary);
+ vocabularies.add(termVocabulary);
+ termVocabulary.setLabel("Test");
+ vocabularyService.merge(new ArrayList<TermVocabulary>(vocabularies));
+ } finally {
+ vocabularyService.delete(termVocabulary);
+ }
+ }
+
+ @Ignore // should be enabled once resolution of #5066 is merged into cdmlib main branch
+ @Test
+ public void saveNewTerm() {
+ UUID vocNameFeatureUuid = UUID.fromString("fa7ca3eef-4092-49e1-beec-ed5096193e5e");
+ UUID vocFeatureUuid = UUID.fromString("b187d555-f06f-4d65-9e53-da7c93f8eaa8");
+ DefinedTermBase newTerm = TermType.Feature.getEmptyDefinedTermBase();
+ newTerm.setLabel("CreateTest");
+
+ try {
+
+ Assert.assertNotNull(newTerm);
+ TermVocabulary vocNameFeature = vocabularyService.find(vocNameFeatureUuid);
+ TermVocabulary vocFeature = vocabularyService.find(vocFeatureUuid);
+
+ List<TermVocabulary> vocs = new ArrayList<TermVocabulary>();
+
+ vocs.add(vocNameFeature);
+ vocs.add(vocFeature);
+
+ vocNameFeature.addTerm(newTerm);
+
+ vocs = vocabularyService.merge(vocs);
+ for(TermVocabulary voc : vocs) {
+ if(voc.getUuid().equals(vocNameFeatureUuid)) {
+ vocNameFeature = voc;
+ }
+ }
+
+ Assert.assertTrue(vocNameFeature.getTerms().contains(newTerm));
+
+ for(Object obj : vocNameFeature.getTerms()) {
+ DefinedTermBase dtb = (DefinedTermBase)obj;
+ if("CreateTest".equals(dtb.getLabel())) {
+ newTerm = dtb;
+ Assert.assertNotNull(dtb.getCreatedBy());
+ Assert.assertNotNull(dtb.getCreated());
+ } else {
+ Assert.assertNull(dtb.getCreatedBy());
+ }
+ }
+ newTerm.setLabel("UpdateTest");
+ newTerm = termService.merge(newTerm);
+ Assert.assertNotNull(newTerm.getUpdatedBy());
+ Assert.assertNotNull(newTerm.getUpdated());
+
+ Assert.assertNull(vocNameFeature.getCreatedBy());
+ Assert.assertNull(vocFeature.getCreatedBy());
+ } finally {
+ if(termService.find(newTerm.getUuid()) != null) {
+ termService.delete(newTerm.getUuid());
+ }
+ }
+ }
+
+ @Ignore // activate after fixing #5138
+ @Test
+ public void updatePerson() {
+ Person person = (Person) CdmApplicationState.getCurrentAppConfig().getAgentService().load(personUuid);
+ // Note : at this point the contact field in Person (AgentBase) is initialized even though no
+ // data related to the Contact class exists in the database.
+ person.setFirstname("Me");
+ CdmApplicationState.getCurrentAppConfig().getAgentService().merge(person);
+
+ }
+
+ @Ignore // activate after fixing #5138
+ @Test
+ public void createPerson() {
+
+ Person person = Person.NewInstance();
+ //person.setTitleCache("New Person", true);
+ person = (Person) CdmApplicationState.getCurrentAppConfig().getAgentService().merge(person);
+ //Note : at this point the contact field in Person (AgentBase) is set to null which is
+ // different behaviour as compared to a load call on an existing Person entity.
+ // The fact that the contact is null will lead to the all-delete-orphan error.
+ person = (Person) CdmApplicationState.getCurrentAppConfig().getAgentService().load(person.getUuid());
+ person.setFirstname("Some");
+ CdmApplicationState.getCurrentAppConfig().getAgentService().merge(person);
+ }
+}
--- /dev/null
+package eu.etaxonomy.taxeditor.session;
+
+import java.util.List;
+import java.util.UUID;
+
+import org.apache.log4j.Logger;
+import org.junit.Assert;
+import org.junit.BeforeClass;
+import org.junit.Test;
+import org.unitils.dbunit.annotation.DataSet;
+
+import eu.etaxonomy.cdm.api.service.IPolytomousKeyService;
+import eu.etaxonomy.cdm.model.common.CdmBase;
+import eu.etaxonomy.cdm.model.common.Language;
+import eu.etaxonomy.cdm.model.description.PolytomousKey;
+import eu.etaxonomy.taxeditor.httpinvoker.RemotingSessionAwareTest;
+
+//FIXME:Remoting fix data issue : User#30
+//@Ignore
+@DataSet
+public class CdmEntitySessionManagerTest extends RemotingSessionAwareTest {
+
+ private static final Logger logger = Logger.getLogger(CdmEntitySessionManagerTest.class);
+
+
+ IPolytomousKeyService polytomousKeyService = getRemoteApplicationController().getPolytomousKeyService();
+
+ private final UUID polytomousKeyUuid = UUID.fromString("0d53ba20-7de4-4baa-bd8a-401048447d66");
+ private final Language english = Language.getLanguageFromUuid(Language.uuidEnglish);
+
+
+ @BeforeClass
+ public static void initializeCdmEntitySessionManagerTest() {
+ }
+
+
+ @Test
+ public void manageNullSessionTest() {
+
+ PolytomousKey pKey = CdmBase.deproxy(polytomousKeyService.find(polytomousKeyUuid),PolytomousKey.class);
+ cdmEntitySessionManager.bind(null);
+ Assert.assertSame(pKey, pKey);
+ Assert.assertNull(getActiveSession());
+ }
+
+ @Test
+ public void manageSessionWithObjectTest() {
+ PolytomousKey pKey = CdmBase.deproxy(polytomousKeyService.find(polytomousKeyUuid),PolytomousKey.class);
+
+ Assert.assertNotNull(getActiveSession());
+
+
+ // FIXME:Remoting fix test of setting root entities
+ //Assert.assertEquals(rootEntities.size(),1);
+ //Assert.assertSame(rootEntities.get(0), pKey);
+
+ String upTitleCache = "Updated Title Cache";
+ String upStatement = "Updated Statement";
+ pKey.setTitleCache(upTitleCache, true);
+
+ pKey.getRoot().getChildAt(0).getStatement().getLabel(english).setText(upStatement);
+ polytomousKeyService.merge(pKey);
+
+ pKey = CdmBase.deproxy(polytomousKeyService.find(polytomousKeyUuid),PolytomousKey.class);
+
+
+ Assert.assertEquals(pKey.getTitleCache(), upTitleCache);
+ Assert.assertEquals(pKey.getRoot().getChildAt(0).getStatement().getLabel(english).getText(), upStatement);
+ }
+
+ @Test
+ public void manageSessionWithListTest() {
+ List<PolytomousKey> pKeys = polytomousKeyService.list(PolytomousKey.class, null, null, null, null);
+ Assert.assertNotNull(getActiveSession());
+
+
+ // FIXME:Remoting fix test of setting root entities
+ //Assert.assertEquals(rootEntities.size(),2);
+ //Assert.assertSame(rootEntities.get(0),pKeys.get(0));
+ //Assert.assertEquals(rootEntities.get(0).getUuid(),UUID.fromString("9d8bf4f6-a70a-4b80-8556-2ccfb436ff01"));
+ //Assert.assertSame(rootEntities.get(1),pKeys.get(1));
+ //Assert.assertEquals(rootEntities.get(1).getUuid(),UUID.fromString("0d53ba20-7de4-4baa-bd8a-401048447d66"));
+
+ String upTitleCache = "Updated Title Cache";
+ String upStatement = "Updated Statement";
+ pKeys.get(0).setTitleCache(upTitleCache, true);
+ polytomousKeyService.merge(pKeys.get(0));
+ pKeys.get(1).getRoot().getChildAt(0).getStatement().getLabel(english).setText(upStatement);
+ polytomousKeyService.merge(pKeys.get(1));
+
+
+ pKeys = polytomousKeyService.list(PolytomousKey.class, null, null, null, null);
+
+ Assert.assertEquals(pKeys.get(0).getTitleCache(), upTitleCache);
+ Assert.assertEquals(pKeys.get(1).getRoot().getChildAt(0).getStatement().getLabel(english).getText(), upStatement);
+
+ }
+
+}
--- /dev/null
+package eu.etaxonomy.taxeditor.session;
+
+import java.util.HashSet;
+import java.util.List;
+import java.util.Map;
+import java.util.Set;
+
+import org.apache.log4j.Logger;
+import org.junit.Assert;
+
+import eu.etaxonomy.cdm.api.application.CdmChangeEvent;
+import eu.etaxonomy.cdm.api.application.ICdmChangeListener;
+import eu.etaxonomy.cdm.model.common.CdmBase;
+
+public class MockSessionOwner<T extends CdmBase> implements ICdmEntitySessionEnabled, ICdmChangeListener {
+
+ private static final Logger logger = Logger.getLogger(MockSessionOwner.class);
+
+ private final List<T> rootEntities;
+ private Set<T> expectedUpdatedObjects;
+ private Set<? extends CdmBase> eventUpdatedObjects;
+
+ private ICdmEntitySession session;
+
+ public MockSessionOwner() {
+ this.rootEntities = null;
+ this.expectedUpdatedObjects = new HashSet<T>();
+ }
+
+// public MockSessionOwner(Set<T> updatedObjects) {
+// this.rootEntities = null;
+// this.updatedObjects = updatedObjects;
+// }
+//
+// public MockSessionOwner(List<T> rootEntities) {
+// this.rootEntities = rootEntities;
+// }
+
+ public void setExpectedUpdatedObjects(Set<T> updatedObjects) {
+ this.expectedUpdatedObjects = updatedObjects;
+ }
+
+ public void addExpectedUpdatedObject(T updatedObject) {
+ this.expectedUpdatedObjects.add(updatedObject);
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled#getCdmEntitySession()
+ */
+ @Override
+ public ICdmEntitySession getCdmEntitySession() {
+ return session;
+ }
+
+ public void setCdmEntitySession(ICdmEntitySession session) {
+ this.session = session;;
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled#getRootEntities()
+ */
+ @Override
+ public List<T> getRootEntities() {
+ return rootEntities;
+ }
+
+ public void dispose() {
+ if(session != null) {
+ session.dispose();
+ logger.info("disposed of session from session owner : " + this);
+ }
+ }
+
+ public Set<? extends CdmBase> getEventUpdatedObjects() {
+ return eventUpdatedObjects;
+ }
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.cdm.api.application.ICdmChangeListener#onChange(eu.etaxonomy.cdm.api.application.CdmChangeEvent)
+ */
+ @Override
+ public void onChange(CdmChangeEvent event) {
+ eventUpdatedObjects = event.getChangedObjects();
+ if(expectedUpdatedObjects != null && !expectedUpdatedObjects.isEmpty()) {
+ for(CdmBase cb : expectedUpdatedObjects) {
+ Assert.assertTrue(event.getChangedObjects().contains(cb));
+ }
+ }
+
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled#getPropertyPathsMap()
+ */
+ @Override
+ public Map<Object, List<String>> getPropertyPathsMap() {
+ // TODO Auto-generated method stub
+ return null;
+ }
+
+}
--- /dev/null
+// $Id$
+/**
+* Copyright (C) 2015 EDIT
+* European Distributed Institute of Taxonomy
+* http://www.e-taxonomy.eu
+*
+* The contents of this file are subject to the Mozilla Public License Version 1.1
+* See LICENSE.TXT at the top of this package for the full license terms.
+*/
+package eu.etaxonomy.taxeditor.test;
+
+import eu.etaxonomy.cdm.api.conversation.ConversationHolder;
+import eu.etaxonomy.cdm.api.conversation.ConversationHolderMock;
+import eu.etaxonomy.cdm.api.conversation.IConversationEnabled;
+import eu.etaxonomy.cdm.persistence.hibernate.CdmDataChangeMap;
+
+/**
+ * @author cmathew
+ * @date 15 Jun 2015
+ *
+ */
+public class MockConversationEnabled implements IConversationEnabled {
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.cdm.persistence.hibernate.ICdmPostDataChangeObserver#update(eu.etaxonomy.cdm.persistence.hibernate.CdmDataChangeMap)
+ */
+ @Override
+ public void update(CdmDataChangeMap arg0) {
+ // TODO Auto-generated method stub
+
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.cdm.api.conversation.IConversationEnabled#getConversationHolder()
+ */
+ @Override
+ public ConversationHolder getConversationHolder() {
+ return new ConversationHolderMock();
+ }
+
+}
--- /dev/null
+// $Id$
+/**
+ * Copyright (C) 2015 EDIT
+ * European Distributed Institute of Taxonomy
+ * http://www.e-taxonomy.eu
+ *
+ * The contents of this file are subject to the Mozilla Public License Version 1.1
+ * See LICENSE.TXT at the top of this package for the full license terms.
+ */
+package eu.etaxonomy.taxeditor.ui.dialogs;
+
+import java.util.List;
+
+import org.junit.Assert;
+import org.junit.Ignore;
+import org.junit.Test;
+import org.unitils.UnitilsJUnit4;
+
+import eu.etaxonomy.cdm.api.application.CdmApplicationState;
+import eu.etaxonomy.cdm.config.CdmSourceException;
+import eu.etaxonomy.taxeditor.remoting.server.CDMServerException;
+import eu.etaxonomy.taxeditor.remoting.source.CdmServerInfo;
+import eu.etaxonomy.taxeditor.remoting.source.CdmServerInfo.CdmInstanceInfo;
+
+/**
+ * @author cmathew
+ * @date 26 Jan 2015
+ *
+ */
+
+public class CdmServerInfoTest extends UnitilsJUnit4 {
+
+ @Test
+ public void pingServersTest() {
+ List<CdmServerInfo> servers = CdmServerInfo.getCdmServers();
+ for(CdmServerInfo server : servers) {
+ server.pingServer();
+ }
+ }
+
+
+ @Ignore // this should be targetting integration or production
+ @Test
+ public void pingInstancesTest() {
+ CdmServerInfo csii = new CdmServerInfo("edit-test", "test.e-taxonomy.eu", 8080);
+ try {
+ csii.refreshInstances();
+ List<CdmInstanceInfo> instances = csii.getInstances();
+ for(CdmInstanceInfo instance : instances) {
+ Assert.assertTrue(csii.pingInstance(instance, 8080));
+ }
+ } catch (CDMServerException e) {
+ Assert.fail("Execption should not be thrown here");
+ }
+ }
+
+ @Test
+ public void refreshWrongInstancesTest() {
+ CdmServerInfo wrongCsii = new CdmServerInfo("local", "local", 8080);
+ try {
+ wrongCsii.refreshInstances();
+ List<CdmInstanceInfo> instances = wrongCsii.getInstances();
+ Assert.fail("Execption should be thrown here");
+ } catch (CDMServerException e) {
+
+ }
+ }
+
+ @Ignore // this should be targetting integration or production
+ @Test
+ public void refreshInstancesTest() throws CDMServerException {
+ CdmServerInfo cdmServerInfo = new CdmServerInfo("edit-test", "test.e-taxonomy.eu", 8080);
+ cdmServerInfo.refreshInstances();
+ List<CdmInstanceInfo> instances = cdmServerInfo.getInstances();
+ Assert.assertTrue(instances != null && !instances.isEmpty());
+ }
+
+ @Test
+ public void compareCdmlibServicesVersionTest() throws CdmSourceException {
+ String editorVersion = CdmApplicationState.getCdmlibVersion();
+ String editorCdmlibLastModified = CdmApplicationState.getCdmlibLastModified();
+ Long editorCdmlibLastModifiedLong = Long.valueOf(editorCdmlibLastModified);
+
+ String[] editorVersionSplit = editorVersion.split("\\.");
+
+ Assert.assertEquals(0, CdmServerInfo.compareCdmlibServicesVersion(editorVersion, editorCdmlibLastModified));
+
+
+ int editorVersionMajor = Integer.valueOf(editorVersionSplit[0]);
+ int editorVersionMinor = Integer.valueOf(editorVersionSplit[1]);
+ int editorVersionPatch = Integer.valueOf(editorVersionSplit[2]);
+
+ String serverVersionMajorNew = String.valueOf(editorVersionMajor+1) + "." + String.valueOf(editorVersionMinor) + "." + String.valueOf(editorVersionPatch);
+ Assert.assertTrue(CdmServerInfo.compareCdmlibServicesVersion(serverVersionMajorNew, editorCdmlibLastModified) > 0);
+
+ String serverVersionMinorNew = String.valueOf(editorVersionMajor) + "." + String.valueOf(editorVersionMinor+1) + "." + String.valueOf(editorVersionPatch);
+ Assert.assertTrue(CdmServerInfo.compareCdmlibServicesVersion(serverVersionMinorNew, editorCdmlibLastModified) > 0);
+
+ String serverVersionPatchNew = String.valueOf(editorVersionMajor) + "." + String.valueOf(editorVersionMinor) + "." + String.valueOf(editorVersionPatch+1);
+ Assert.assertTrue(CdmServerInfo.compareCdmlibServicesVersion(serverVersionPatchNew, editorCdmlibLastModified) > 0);
+
+ String serverVersionMajorOld = String.valueOf(editorVersionMajor-1) + "." + String.valueOf(editorVersionMinor) + "." + String.valueOf(editorVersionPatch);
+ Assert.assertTrue(CdmServerInfo.compareCdmlibServicesVersion(serverVersionMajorOld, editorCdmlibLastModified) < 0);
+
+ String serverVersionMinorOld = String.valueOf(editorVersionMajor) + "." + String.valueOf(editorVersionMinor-1) + "." + String.valueOf(editorVersionPatch);
+ Assert.assertTrue(CdmServerInfo.compareCdmlibServicesVersion(serverVersionMinorOld, editorCdmlibLastModified) < 0);
+
+ String serverVersionPatchOld = String.valueOf(editorVersionMajor) + "." + String.valueOf(editorVersionMinor) + "." + String.valueOf(editorVersionPatch-1);
+ Assert.assertTrue(CdmServerInfo.compareCdmlibServicesVersion(serverVersionPatchOld, editorCdmlibLastModified) < 0);
+
+ String serverCdmlibLastModifiedNew = String.valueOf(editorCdmlibLastModifiedLong+1);
+ Assert.assertTrue(CdmServerInfo.compareCdmlibServicesVersion(editorVersion, serverCdmlibLastModifiedNew) > 0);
+
+ String serverCdmlibLastModifiedOld = String.valueOf(editorCdmlibLastModifiedLong-1);
+ Assert.assertTrue(CdmServerInfo.compareCdmlibServicesVersion(editorVersion, serverCdmlibLastModifiedOld) < 0);
+
+ }
+
+ @Test
+ public void convertToServerConfigTest() {
+
+
+ }
+}
package eu.etaxonomy.taxeditor.ui.dialogs;\r
\r
import org.eclipse.swtbot.eclipse.finder.waits.Conditions;\r
+import org.junit.Ignore;\r
import org.junit.Test;\r
\r
import eu.etaxonomy.taxeditor.test.AbstractEditorTest;\r
\r
-\r
+@Ignore\r
public class LoginDialogTest extends AbstractEditorTest{\r
- \r
+\r
@Test\r
public void canLoginAsAdmin() throws Exception {\r
bot.menu("General").menu("Login").click();\r
bot.textWithLabel("Password").setText("00000");\r
utils.ok();\r
}\r
- \r
+\r
@Test\r
public void canCancelLogin() throws Exception {\r
bot.menu("General").menu("Login").click();\r
bot.waitUntil(Conditions.shellIsActive("Login"));\r
utils.cancel();\r
}\r
- \r
+\r
}\r
/**\r
- * \r
+ *\r
*/\r
package eu.etaxonomy.taxeditor.ui.selection;\r
\r
import org.eclipse.swtbot.eclipse.finder.waits.Conditions;\r
+import org.junit.Ignore;\r
import org.junit.Test;\r
\r
/**\r
- * This test will only test the selection element itself. The test may have to start other \r
- * dialogs open windows before to get at the selection element. Any errors on the way \r
+ * This test will only test the selection element itself. The test may have to start other\r
+ * dialogs open windows before to get at the selection element. Any errors on the way\r
* should be handled by different tests.\r
- * \r
+ *\r
* @author n.hoffmann\r
*\r
*/\r
+@Ignore\r
public class ClassificationSelectionElementTest extends AbstractSelectionElementTest{\r
@Override\r
public void setup() {\r
bot.menu("General").menu("New").menu("Taxon").click();\r
bot.waitUntil(Conditions.shellIsActive("New Entity"));\r
}\r
- \r
+\r
@Test\r
public void canSelectClassification() {\r
utils.openFilteredSelection(0, "Choose a Classification");\r
/**\r
- * \r
+ *\r
*/\r
package eu.etaxonomy.taxeditor.ui.selection;\r
\r
import org.eclipse.swtbot.eclipse.finder.waits.Conditions;\r
+import org.junit.Ignore;\r
import org.junit.Test;\r
\r
/**\r
* @author n.hoffmann\r
*\r
*/\r
+@Ignore\r
public class NameSelectionElementTest extends AbstractSelectionElementTest {\r
@Override\r
public void setup() {\r
bot.menu("General").menu("New").menu("Taxon").click();\r
bot.waitUntil(Conditions.shellIsActive("New Entity"));\r
}\r
- \r
+\r
@Test\r
public void canSelectName() {\r
utils.openFilteredSelection(3, "Choose a name");\r
/**\r
- * \r
+ *\r
*/\r
package eu.etaxonomy.taxeditor.ui.selection;\r
\r
import org.eclipse.swtbot.eclipse.finder.waits.Conditions;\r
+import org.junit.Ignore;\r
import org.junit.Test;\r
\r
/**\r
* @author n.hoffmann\r
*\r
*/\r
+@Ignore\r
public class TaxonNodeSelectionElementTest extends AbstractSelectionElementTest {\r
@Override\r
public void setup() {\r
bot.menu("General").menu("New").menu("Taxon").click();\r
bot.waitUntil(Conditions.shellIsActive("New Entity"));\r
}\r
- \r
+\r
@Test\r
public void canSelectTaxon() {\r
utils.openFilteredSelection(1, "Select parent taxon");\r
utils.cancel();\r
}\r
- \r
+\r
}\r
/**\r
- * \r
+ *\r
*/\r
package eu.etaxonomy.taxeditor.ui.selection;\r
\r
import org.eclipse.swtbot.eclipse.finder.waits.Conditions;\r
+import org.junit.Ignore;\r
import org.junit.Test;\r
\r
/**\r
- * This test will only test the selection element itself. The test may have to start other \r
- * dialogs open windows before to get at the selection element. Any errors on the way \r
+ * This test will only test the selection element itself. The test may have to start other\r
+ * dialogs open windows before to get at the selection element. Any errors on the way\r
* should be handled by different tests.\r
- * \r
+ *\r
* @author n.hoffmann\r
*\r
*/\r
+@Ignore\r
public class TaxonSelectionElementTest extends AbstractSelectionElementTest {\r
@Override\r
public void setup() {\r
bot.menu("General").menu("New").menu("Taxon").click();\r
bot.waitUntil(Conditions.shellIsActive("New Entity"));\r
}\r
- \r
+\r
@Test\r
public void canSelectTaxon() {\r
utils.openFilteredSelection(2, "Choose a taxon");\r
--- /dev/null
+package eu.etaxonomy.taxeditor.util;
+
+/**
+ * based on from http://code.google.com/p/java-tester/source/browse/trunk/src/main/java/org/jtester/unitils/database/H2DbSupport.java
+ */
+
+
+import java.util.Set;
+
+import org.unitils.core.dbsupport.DbSupport;
+
+public class H2DbSupport extends DbSupport {
+ /**
+ * Creates support for HsqlDb databases.
+ */
+ public H2DbSupport() {
+ super("h2");
+ }
+
+ @Override
+ public Set<String> getColumnNames(String tableName) {
+ return getSQLHandler().getItemsAsStringSet(
+ "select COLUMN_NAME from INFORMATION_SCHEMA.COLUMNS where TABLE_NAME = '" + tableName
+ + "' AND TABLE_SCHEMA = '" + getSchemaName() + "'");
+ }
+
+ @Override
+ public Set<String> getTableNames() {
+ return getSQLHandler().getItemsAsStringSet(
+ "select TABLE_NAME from INFORMATION_SCHEMA.TABLES where TABLE_TYPE = 'TABLE' AND TABLE_SCHEMA = '"
+ + getSchemaName() + "'");
+ }
+
+ @Override
+ public Set<String> getViewNames() {
+ return getSQLHandler().getItemsAsStringSet(
+ "select TABLE_NAME from INFORMATION_SCHEMA.TABLES where TABLE_TYPE = 'VIEW' AND TABLE_SCHEMA = '"
+ + getSchemaName() + "'");
+ }
+
+ @Override
+ public Set<String> getSequenceNames() {
+ return getSQLHandler().getItemsAsStringSet(
+ "select SEQUENCE_NAME from INFORMATION_SCHEMA.SEQUENCES where SEQUENCE_SCHEMA = '"
+ + getSchemaName() + "'");
+ }
+
+ @Override
+ public Set<String> getTriggerNames() {
+ return getSQLHandler().getItemsAsStringSet(
+ "select TRIGGER_NAME from INFORMATION_SCHEMA.TRIGGERS where TRIGGER_SCHEMA = '" + getSchemaName()
+ + "'");
+ }
+
+ @Override
+ public long getSequenceValue(String sequenceName) {
+ return getSQLHandler().getItemAsLong(
+ "select CURRENT_VALUE from INFORMATION_SCHEMA.SEQUENCES where SEQUENCE_SCHEMA = '"
+ + getSchemaName() + "' and SEQUENCE_NAME = '" + sequenceName + "'");
+ }
+
+ @Override
+ public boolean supportsSequences() {
+ return true;
+ }
+
+ @Override
+ public boolean supportsTriggers() {
+ return true;
+ }
+
+ @Override
+ public boolean supportsIdentityColumns() {
+ return true;
+ }
+
+ @Override
+ public void incrementSequenceToValue(String sequenceName, long newSequenceValue) {
+ getSQLHandler().executeUpdate(
+ "alter sequence " + qualified(sequenceName) + " restart with " + newSequenceValue);
+ }
+
+ @Override
+ public void incrementIdentityColumnToValue(String tableName, String identityColumnName, long identityValue) {
+ getSQLHandler().executeUpdate(
+ "alter table " + qualified(tableName) + " alter column " + quoted(identityColumnName)
+ + " RESTART WITH " + identityValue);
+ }
+
+ @Override
+ public void disableReferentialConstraints() {
+ Set<String> tableNames = getTableNames();
+ for (String tableName : tableNames) {
+ disableReferentialConstraints(tableName);
+ }
+ }
+
+ @Override
+ public void disableValueConstraints() {
+ Set<String> tableNames = getTableNames();
+ for (String tableName : tableNames) {
+ disableValueConstraints(tableName);
+ }
+ }
+
+ private void disableReferentialConstraints(String tableName) {
+ Set<String> constraintNames = this.getForeignKeyConstraintNames(tableName);
+ for (String constraintName : constraintNames) {
+ this.removeForeignKeyConstraint(tableName, constraintName);
+ }
+ }
+
+ private void disableValueConstraints(String tableName) {
+ Set<String> primaryKeyColumnNames = this.getPrimaryKeyColumnNames(tableName);
+
+ Set<String> notNullColumnNames = this.getNotNullColummnNames(tableName);
+ for (String notNullColumnName : notNullColumnNames) {
+ if (primaryKeyColumnNames.contains(notNullColumnName)) {
+ continue;
+ }
+ this.removeNotNullConstraint(tableName, notNullColumnName);
+ }
+ }
+
+ /**
+ * Gets the names of all identity columns of the given table.
+ * <p/>
+ * todo check, at this moment the PK columns are returned
+ *
+ * @param tableName The table, not null
+ * @return The names of the identity columns of the table with the given name
+ */
+ @Override
+ public Set<String> getIdentityColumnNames(String tableName) {
+ return getPrimaryKeyColumnNames(tableName);
+ }
+
+ private Set<String> getPrimaryKeyColumnNames(String tableName) {
+ return getSQLHandler().getItemsAsStringSet(
+ "select COLUMN_NAME from INFORMATION_SCHEMA.INDEXES where PRIMARY_KEY=TRUE AND TABLE_NAME = '"
+ + tableName + "' AND TABLE_SCHEMA = '" + getSchemaName() + "'");
+ }
+
+ private Set<String> getNotNullColummnNames(String tableName) {
+ return getSQLHandler().getItemsAsStringSet(
+ "select COLUMN_NAME from INFORMATION_SCHEMA.COLUMNS where IS_NULLABLE = 'NO' AND TABLE_NAME = '"
+ + tableName + "' AND TABLE_SCHEMA = '" + getSchemaName() + "'");
+ }
+
+ private Set<String> getForeignKeyConstraintNames(String tableName) {
+ return getSQLHandler().getItemsAsStringSet(
+ "select CONSTRAINT_NAME from INFORMATION_SCHEMA.CONSTRAINTS "
+ + "where CONSTRAINT_TYPE = 'REFERENTIAL' AND TABLE_NAME = '" + tableName
+ + "' AND CONSTRAINT_SCHEMA = '" + getSchemaName() + "'");
+ }
+
+ private void removeForeignKeyConstraint(String tableName, String constraintName) {
+ getSQLHandler().executeUpdate(
+ "alter table " + qualified(tableName) + " drop constraint " + quoted(constraintName));
+ }
+
+ private void removeNotNullConstraint(String tableName, String columnName) {
+ getSQLHandler().executeUpdate(
+ "alter table " + qualified(tableName) + " alter column " + quoted(columnName) + " set null");
+ }
+}
--- /dev/null
+<?xml version="1.0" encoding="UTF-8"?>
+<beans xmlns="http://www.springframework.org/schema/beans" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xmlns:context="http://www.springframework.org/schema/context" xsi:schemaLocation="http://www.springframework.org/schema/beans http://www.springframework.org/schema/beans/spring-beans-3.1.xsd http://www.springframework.org/schema/context http://www.springframework.org/schema/context/spring-context-2.5.xsd">
+ <bean id="defaultRemoteSource">
+ <property name="server" value="127.0.0.1" />
+ <property name="port" value="9090" />
+ <property name="contextPath" value="" />
+ </bean>
+ <bean id="incompleteRemoteSource">
+ <property name="port" value="9090" />
+ <property name="contextPath" value="" />
+ </bean>
+</beans>
+
--- /dev/null
+<?xml version="1.0" encoding="UTF-8"?>
+<beans xmlns="http://www.springframework.org/schema/beans"
+ xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
+ xmlns:tx="http://www.springframework.org/schema/tx"
+ xmlns:context="http://www.springframework.org/schema/context"
+ xsi:schemaLocation="http://www.springframework.org/schema/beans http://www.springframework.org/schema/beans/spring-beans-3.1.xsd
+ http://www.springframework.org/schema/context http://www.springframework.org/schema/context/spring-context-2.5.xsd
+ http://www.springframework.org/schema/tx http://www.springframework.org/schema/tx/spring-tx-2.5.xsd
+ ">
+
+ <!--
+ DataSourceProperties allow configuring specific properties of the datasources
+
+ * cdmlib-remote.xslBasePath:
+ alternative base path for REST services to retrieve XSL style sheets from.
+ the base path must be on the same domain since cross domain xsl loading is
+ not permitted
+ -->
+ <bean id="dataSourceProperties" class="eu.etaxonomy.cdm.remote.config.DataSourceProperties">
+ <property name="propsMap">
+ <map>
+ <!--
+ <entry key="dataSourceBeanID">
+ <props>
+ <prop key="cdmlib-remote.xslBasePath">/xsl</prop>
+ </props>
+ </entry>
+ -->
+ </map>
+ </property>
+ </bean>
+
+ <bean id="cdmTest" lazy-init="true" class="com.mchange.v2.c3p0.ComboPooledDataSource">
+ <property name="driverClass" value="eu.etaxonomy.cdm.database.LocalH2"/>
+ <property name="user" value="sa" />
+ <property name="password" value="" />
+ <property name="jdbcUrl" value="jdbc:h2:file:./target/classes/h2/cdmTest;AUTO_SERVER=TRUE"/>
+ </bean>
+</beans>
\ No newline at end of file
--- /dev/null
+<?xml version="1.0" encoding="UTF-8"?><!--
+ generated by Jailer 4.3, Thu Oct 09 18:00:09 CEST 2014 from cmathew@cmbgbm-t530
+
+ Extraction Model: PolytomousKey where uuid like '0d53ba20-7de4-4baa-bd8a-401048447d66' (extractionmodel/by-example/SbE-PolytomousKey-17-59-56-907.csv)
+ Database URL: jdbc:mysql://127.0.0.1:3306/local-cyprus
+ Database User: root
+
+ Exported Rows: 79
+ AgentBase 1
+ Credit 1
+ Extension 1
+ KeyStatement 10
+ KeyStatement_LanguageString 10
+ LanguageString 19
+ OriginalSourceBase 2
+ PolytomousKey 2
+ PolytomousKeyNode 10
+ PolytomousKeyNode_LanguageString 9
+ PolytomousKey_Credit 1
+ PolytomousKey_Extension 1
+ PolytomousKey_OriginalSourceBase 2
+ PolytomousKey_RightsInfo 1
+ PolytomousKey_Taxon 1
+ RightsInfo 1
+ TaxonBase 6
+
+--><dataset>
+ <PolytomousKey_Extension PolytomousKey_id="1550" extensions_id="10"/>
+
+ <PolytomousKey_Credit PolytomousKey_id="1550" credits_id="20" sortIndex="0"/>
+
+ <PolytomousKeyNode_LanguageString PolytomousKeyNode_id="2751" modifyingtext_id="13780" modifyingtext_mapkey_id="124"/>
+ <PolytomousKeyNode_LanguageString PolytomousKeyNode_id="2752" modifyingtext_id="13781" modifyingtext_mapkey_id="124"/>
+ <PolytomousKeyNode_LanguageString PolytomousKeyNode_id="2753" modifyingtext_id="13795" modifyingtext_mapkey_id="124"/>
+ <PolytomousKeyNode_LanguageString PolytomousKeyNode_id="2754" modifyingtext_id="13788" modifyingtext_mapkey_id="124"/>
+ <PolytomousKeyNode_LanguageString PolytomousKeyNode_id="2755" modifyingtext_id="13785" modifyingtext_mapkey_id="124"/>
+ <PolytomousKeyNode_LanguageString PolytomousKeyNode_id="2756" modifyingtext_id="13787" modifyingtext_mapkey_id="124"/>
+ <PolytomousKeyNode_LanguageString PolytomousKeyNode_id="2757" modifyingtext_id="13794" modifyingtext_mapkey_id="124"/>
+ <PolytomousKeyNode_LanguageString PolytomousKeyNode_id="2758" modifyingtext_id="13791" modifyingtext_mapkey_id="124"/>
+ <PolytomousKeyNode_LanguageString PolytomousKeyNode_id="2759" modifyingtext_id="13793" modifyingtext_mapkey_id="124"/>
+
+ <LanguageString id="13780" created="2014-03-10 10:03:09.0" uuid="cceaa60b-61f4-4c8a-bb0e-d45f0fa3e2dc" text="Modifying Text 1a" language_id="124"/>
+ <LanguageString id="13781" created="2014-03-10 10:03:17.0" uuid="01a0ace4-de49-4725-9909-e881fb13035d" text="Modifying Text 1b" language_id="124"/>
+ <LanguageString id="13782" created="2014-03-10 10:03:48.0" uuid="ec0fea40-69dd-4c3e-ab7a-34948037a069" updated="2014-03-10 10:06:32.0" text="Capitula with ligulate ray-florets; leaves pinnatisect" createdby_id="30" updatedby_id="30" language_id="124"/>
+ <LanguageString id="13783" created="2014-03-10 10:04:03.0" uuid="82f8a3a0-567f-4d89-ba10-3f3699111d55" updated="2014-03-10 10:06:32.0" text="Ray-florets yellow" createdby_id="30" updatedby_id="30" language_id="124"/>
+ <LanguageString id="13784" created="2014-03-10 10:04:21.0" uuid="4270501f-1efc-45c2-9e8f-c65f120e8f4c" updated="2014-03-10 10:06:32.0" text="Stem thinly pilose; leaves 10-15 mm wide, with spreading linear-subulate segments; perennial herb" createdby_id="30" updatedby_id="30" language_id="124"/>
+ <LanguageString id="13785" created="2014-03-10 10:04:07.0" uuid="813f5fd6-c8f6-43e8-9a2b-1464f3ba052a" updated="2014-03-10 10:06:32.0" text="" createdby_id="30" updatedby_id="30" language_id="124"/>
+ <LanguageString id="13786" created="2014-03-10 10:04:53.0" uuid="ba17ac94-632f-4d69-ac89-a882e19ff1c5" updated="2014-03-10 10:06:32.0" text="Stem white-tomentose; leaves 1-3 mm wide, with minute overlapping, transverse segments; small subshrubs with a woody base" createdby_id="30" updatedby_id="30" language_id="124"/>
+ <LanguageString id="13787" created="2014-03-10 10:04:34.0" uuid="ab219a5d-e0c4-45fd-8405-6693c3fb8abf" updated="2014-03-10 10:06:32.0" text="" createdby_id="30" updatedby_id="30" language_id="124"/>
+ <LanguageString id="13788" created="2014-03-10 10:03:53.0" uuid="2baec690-422d-4f85-bcfd-24f5718cbecf" updated="2014-03-10 10:06:32.0" text="" createdby_id="30" updatedby_id="30" language_id="124"/>
+ <LanguageString id="13789" created="2014-03-10 10:05:16.0" uuid="7c6a7984-8e6f-48b1-86b2-d5d643199bf3" updated="2014-03-10 10:06:32.0" text="Ray-florets white" createdby_id="30" updatedby_id="30" language_id="124"/>
+ <LanguageString id="13790" created="2014-03-10 10:05:34.0" uuid="72bd8bc9-1904-47ab-8bec-b9296a98b244" updated="2014-03-10 10:06:32.0" text="Perennial herb; stem pilose, hairy or glabrescent, but not tomentose; ligules 1-2 mm diam." createdby_id="30" updatedby_id="30" language_id="124"/>
+ <LanguageString id="13791" created="2014-03-10 10:05:20.0" uuid="c917e3fb-e48b-4207-b77d-c1c108e37906" updated="2014-03-10 10:06:32.0" text="" createdby_id="30" updatedby_id="30" language_id="124"/>
+ <LanguageString id="13792" created="2014-03-10 10:06:15.0" uuid="c5dd35d8-da6a-4d05-b30c-6b55220bd989" updated="2014-03-10 10:06:32.0" text="Shrub with a woody base; stem white-tomentose or woolly; ligules 4-5 mm diam." createdby_id="30" updatedby_id="30" language_id="124"/>
+ <LanguageString id="13793" created="2014-03-10 10:06:03.0" uuid="227a17f6-1ca1-4d06-8480-25711b614863" updated="2014-03-10 10:06:32.0" text="" createdby_id="30" updatedby_id="30" language_id="124"/>
+ <LanguageString id="13794" created="2014-03-10 10:05:07.0" uuid="2c434ab1-8ca7-4464-b5cd-4cee40db41ed" updated="2014-03-10 10:06:32.0" text="" createdby_id="30" updatedby_id="30" language_id="124"/>
+ <LanguageString id="13795" created="2014-03-10 10:03:38.0" uuid="27190d54-f53b-401e-820c-edfb36d4bcbf" updated="2014-03-10 10:06:32.0" text="" createdby_id="30" updatedby_id="30" language_id="124"/>
+ <LanguageString id="13796" created="2014-03-10 10:03:25.0" uuid="69cffb28-8a85-478f-bcae-533e20938ccd" updated="2014-03-10 10:06:32.0" text="Capitula without ligulate ray-florets; leaves entire or subentire" createdby_id="30" updatedby_id="30" language_id="124"/>
+ <LanguageString id="14570" created="2014-10-09 15:42:33.0" uuid="84967760-6dbe-4af4-8e0c-309f1af6ce20" updated="2014-10-09 15:42:44.0" text="Question 1" createdby_id="10" updatedby_id="10" language_id="124"/>
+ <LanguageString id="14571" created="2014-10-09 15:42:55.0" uuid="d82f37b1-f51d-42c1-a291-0c7820db155e" updated="2014-10-09 15:43:03.0" text="Question 2" createdby_id="10" updatedby_id="10" language_id="124"/>
+ <LanguageString id="14572" created="2014-10-09 15:42:55.0" uuid="d82f37b1-f51d-42c1-a291-0c7820db155f" updated="2014-10-09 15:43:03.0" text="Koi Sach Ya Sawal" createdby_id="30" updatedby_id="30" language_id="125"/>
+
+ <TaxonBase DTYPE="Taxon" id="32" created="2011-03-01 20:11:26.0" uuid="8217ef77-2ab1-4318-bd67-ccd0cdef07c4" protectedtitlecache="false" titleCache="Achillea arabica Kotschy sec. Cyprus" doubtful="false" usenamecache="false" excluded="false" taxonstatusunknown="false" taxonomicchildrencount="0" unplaced="false" createdby_id="11" sec_id="10" publish="true"/>
+ <TaxonBase DTYPE="Taxon" id="35" created="2010-12-21 15:09:43.0" uuid="fade44fd-34b2-455f-861a-d1372b866f06" protectedtitlecache="false" titleCache="Achillea sec. Cyprus" doubtful="false" usenamecache="false" excluded="false" taxonstatusunknown="false" taxonomicchildrencount="0" unplaced="false" createdby_id="11" sec_id="10" publish="true"/>
+ <TaxonBase DTYPE="Taxon" id="36" created="2011-03-01 20:11:26.0" uuid="05f0a2e1-e3c3-4e74-8fec-8a0ae89236c3" protectedtitlecache="false" titleCache="Achillea cretica L. sec. Cyprus" doubtful="false" usenamecache="false" excluded="false" taxonstatusunknown="false" taxonomicchildrencount="0" unplaced="false" createdby_id="11" sec_id="10" publish="true"/>
+ <TaxonBase DTYPE="Taxon" id="37" created="2011-03-01 20:11:26.0" uuid="0f8d18a9-e861-48e8-bfab-83e01a379bc0" protectedtitlecache="false" titleCache="Achillea maritima (L.)Ehrend. & Y.-P. Guo subsp. maritima sec. Cyprus" doubtful="false" usenamecache="false" excluded="false" taxonstatusunknown="false" taxonomicchildrencount="0" unplaced="false" createdby_id="11" sec_id="10" publish="true"/>
+ <TaxonBase DTYPE="Taxon" id="40" created="2010-12-21 15:09:43.0" uuid="2b336df7-29e8-4f79-985f-66502739d22f" protectedtitlecache="false" titleCache="Achillea millefolium L. sec. Cyprus" doubtful="false" usenamecache="false" excluded="false" taxonstatusunknown="false" taxonomicchildrencount="0" unplaced="false" createdby_id="11" sec_id="10" publish="true"/>
+ <TaxonBase DTYPE="Taxon" id="41" created="2011-03-01 20:11:26.0" uuid="094e1af8-efd8-4605-b037-b4f715379562" protectedtitlecache="false" titleCache="Achillea santolinoides subsp. wilhelmsii (K. Koch) Greuter sec. Cyprus" doubtful="false" usenamecache="false" excluded="false" taxonstatusunknown="false" taxonomicchildrencount="0" unplaced="false" createdby_id="11" sec_id="10" publish="true"/>
+
+ <PolytomousKey_Taxon polytomousKey_id="1550" taxon_id="35"/>
+
+ <RightsInfo id="10" created="2014-10-09 15:45:53.0" uuid="bdfb572b-be25-45e7-9349-22a9da43531f" updated="2014-10-09 15:48:01.0" text="Rights Text Test" createdby_id="10" updatedby_id="10" agent_id="4808" type_id="2056"/>
+
+ <PolytomousKeyNode id="2750" created="2014-03-10 10:02:35.0" uuid="75e4c924-ff58-4ee7-a59d-fd9173517d08" updated="2014-03-10 10:02:42.0" nodenumber="1" createdby_id="30" updatedby_id="30" key_id="1550" question_id="2760" statement_id="2460"/>
+ <PolytomousKeyNode id="2751" created="2014-03-10 10:02:52.0" uuid="23e51ff7-11b1-443b-aff2-3fe8b5ace9fe" sortindex="0" key_id="1550" statement_id="2467" subkey_id="1550" taxon_id="37" parent_id="2750"/>
+ <PolytomousKeyNode id="2752" created="2014-03-10 10:03:16.0" uuid="dcf326f7-c0ad-4e76-b64e-43aea11f767c" key_id="1550"/>
+ <PolytomousKeyNode id="2753" created="2014-03-10 10:03:38.0" uuid="b775c027-13c0-4b87-8aa9-712faeaafbdc" updated="2014-03-10 10:06:32.0" nodenumber="2" sortindex="1" createdby_id="30" updatedby_id="30" key_id="1550" question_id="2761" statement_id="2460" subkey_id="1550" parent_id="2750"/>
+ <PolytomousKeyNode id="2754" created="2014-03-10 10:03:52.0" uuid="df5d5922-35de-43d5-9d46-7730ae28eeb3" updated="2014-03-10 10:06:32.0" nodenumber="3" sortindex="0" createdby_id="30" updatedby_id="30" key_id="1550" statement_id="2461" subkey_id="1550" parent_id="2753"/>
+ <PolytomousKeyNode id="2755" created="2014-03-10 10:04:07.0" uuid="0c8583ee-399e-433c-b76b-272c54dbd9f5" updated="2014-03-10 10:06:32.0" sortindex="0" createdby_id="30" updatedby_id="30" key_id="1550" statement_id="2462" taxon_id="32" parent_id="2754"/>
+ <PolytomousKeyNode id="2756" created="2014-03-10 10:04:34.0" uuid="a10e1e61-82c0-470e-a245-10a927b80c9a" updated="2014-03-10 10:06:32.0" sortindex="1" createdby_id="30" updatedby_id="30" key_id="1550" statement_id="2463" taxon_id="41" parent_id="2754"/>
+ <PolytomousKeyNode id="2757" created="2014-03-10 10:05:07.0" uuid="19f7a6a2-4c55-49cb-8b92-d68a9fd9074c" updated="2014-03-10 10:06:32.0" nodenumber="4" sortindex="1" createdby_id="30" updatedby_id="30" key_id="1550" statement_id="2464" parent_id="2753"/>
+ <PolytomousKeyNode id="2758" created="2014-03-10 10:05:20.0" uuid="0a4d86d1-fba5-4088-8dcc-6f0e7268ca5b" updated="2014-03-10 10:06:32.0" sortindex="0" createdby_id="30" updatedby_id="30" key_id="1550" statement_id="2465" taxon_id="40" parent_id="2757"/>
+ <PolytomousKeyNode id="2759" created="2014-03-10 10:06:03.0" uuid="827c9df4-ac15-4163-95ab-616d51f62803" updated="2014-03-10 10:06:32.0" sortindex="1" createdby_id="30" updatedby_id="30" key_id="1550" statement_id="2466" taxon_id="36" parent_id="2757"/>
+
+ <Credit id="20" created="2014-10-09 15:45:22.0" uuid="aa412b15-ee6c-4834-b14e-a66969cb398d" updated="2014-10-09 15:48:01.0" text="Credits Text Test" createdby_id="10" updatedby_id="10" language_id="124" agent_id="4809"/>
+
+ <KeyStatement id="2460" created="2014-03-10 10:03:48.0" uuid="66da6df7-784c-4d5a-9378-58b2cf92ba13" updated="2014-03-10 10:06:32.0" createdby_id="30" updatedby_id="30"/>
+ <KeyStatement id="2461" created="2014-03-10 10:04:03.0" uuid="f9cfd498-de47-48fd-b38c-43cf57b63750" updated="2014-03-10 10:06:32.0" createdby_id="30" updatedby_id="30"/>
+ <KeyStatement id="2462" created="2014-03-10 10:04:21.0" uuid="817fb39e-91d4-4d8c-a942-6acab47575d1" updated="2014-03-10 10:06:32.0" createdby_id="30" updatedby_id="30"/>
+ <KeyStatement id="2463" created="2014-03-10 10:04:53.0" uuid="6b571b86-7764-4f27-925c-ae5e2653f7ad" updated="2014-03-10 10:06:32.0" createdby_id="30" updatedby_id="30"/>
+ <KeyStatement id="2464" created="2014-03-10 10:05:16.0" uuid="91bbb534-abdf-4915-9f6f-a0cb41f8cf58" updated="2014-03-10 10:06:32.0" createdby_id="30" updatedby_id="30"/>
+ <KeyStatement id="2465" created="2014-03-10 10:05:34.0" uuid="1991ca31-2630-4917-8db3-eb67cec8f231" updated="2014-03-10 10:06:32.0" createdby_id="30" updatedby_id="30"/>
+ <KeyStatement id="2466" created="2014-03-10 10:06:15.0" uuid="3e1bbc59-b098-4533-ac35-245e1140a0ae" updated="2014-03-10 10:06:32.0" createdby_id="30" updatedby_id="30"/>
+ <KeyStatement id="2467" created="2014-03-10 10:03:24.0" uuid="68fd99f6-64ce-4bb8-a6af-d2cf2c046e2c" updated="2014-03-10 10:06:32.0" createdby_id="30" updatedby_id="30"/>
+ <KeyStatement id="2760" created="2014-10-09 15:42:33.0" uuid="b9702653-f620-4208-bda9-a6fe082004d1" updated="2014-10-09 15:42:44.0" createdby_id="10" updatedby_id="10"/>
+ <KeyStatement id="2761" created="2014-10-09 15:42:55.0" uuid="688a432f-4b57-4c6f-a8f6-0c468a28cb7c" updated="2014-10-09 15:43:03.0" createdby_id="10" updatedby_id="10"/>
+
+ <AgentBase DTYPE="Person" id="4809" created="2010-12-21 15:09:59.0" uuid="945d08f2-eb92-45b6-9252-6275ea6d338b" protectedtitlecache="false" titleCache="R. A. Graham" nomenclaturaltitle="R. A. Graham" createdby_id="11"/>
+
+ <Extension id="10" created="2014-10-09 15:45:41.0" uuid="0d6f35d7-7e76-446a-a017-7e8355ee1b4c" updated="2014-10-09 15:48:01.0" extendedObj_type="eu.etaxonomy.cdm.model.description.PolytomousKey" extendedObj_id="1550" value="http://test.com" createdby_id="10" updatedby_id="10" type_id="2075"/>
+
+ <PolytomousKey_OriginalSourceBase PolytomousKey_id="1550" sources_id="23710"/>
+ <PolytomousKey_OriginalSourceBase PolytomousKey_id="1550" sources_id="23711"/>
+
+ <PolytomousKey_RightsInfo PolytomousKey_id="1550" rights_id="10"/>
+
+ <KeyStatement_LanguageString KeyStatement_id="2460" label_id="13782" label_mapkey_id="124"/>
+ <KeyStatement_LanguageString KeyStatement_id="2461" label_id="13783" label_mapkey_id="124"/>
+ <KeyStatement_LanguageString KeyStatement_id="2462" label_id="13784" label_mapkey_id="124"/>
+ <KeyStatement_LanguageString KeyStatement_id="2463" label_id="13786" label_mapkey_id="124"/>
+ <KeyStatement_LanguageString KeyStatement_id="2464" label_id="13789" label_mapkey_id="124"/>
+ <KeyStatement_LanguageString KeyStatement_id="2465" label_id="13790" label_mapkey_id="124"/>
+ <KeyStatement_LanguageString KeyStatement_id="2466" label_id="13792" label_mapkey_id="124"/>
+ <KeyStatement_LanguageString KeyStatement_id="2467" label_id="13796" label_mapkey_id="124"/>
+ <KeyStatement_LanguageString KeyStatement_id="2760" label_id="14570" label_mapkey_id="124"/>
+ <KeyStatement_LanguageString KeyStatement_id="2761" label_id="14571" label_mapkey_id="124"/>
+ <KeyStatement_LanguageString KeyStatement_id="2460" label_id="14572" label_mapkey_id="125"/>
+
+ <PolytomousKey id="751" created="2013-03-24 11:17:08.0" uuid="9d8bf4f6-a70a-4b80-8556-2ccfb436ff01" protectedtitlecache="true" titleCache="Asphodeline" createdby_id="30" startNumber="1"/>
+ <PolytomousKey id="1550" created="2014-03-10 10:02:35.0" uuid="0d53ba20-7de4-4baa-bd8a-401048447d66" updated="2014-03-10 10:02:42.0" protectedtitlecache="true" titleCache="Achillea" createdby_id="30" updatedby_id="30" root_id="2750" startNumber="1"/>
+
+ <OriginalSourceBase DTYPE="IdentifiableSource" id="23710" created="2014-03-10 10:06:57.0" uuid="95e05e82-499d-4b8a-ad6b-1085f74a7496" updated="2014-03-10 10:07:33.0" sourcedObj_type="eu.etaxonomy.cdm.model.description.PolytomousKey" sourcedObj_id="1550" createdby_id="30" updatedby_id="30" citation_id="1730" sourceType="PTS"/>
+ <OriginalSourceBase DTYPE="IdentifiableSource" id="23711" created="2014-03-10 10:06:48.0" uuid="f77555fe-0d98-4c9f-98ed-a5bca6b1e342" updated="2014-03-10 10:07:33.0" sourcedObj_type="eu.etaxonomy.cdm.model.description.PolytomousKey" sourcedObj_id="1550" createdby_id="30" updatedby_id="30" citation_id="50" sourceType="PTS"/>
+
+
+</dataset>
--- /dev/null
+<?xml version="1.0" encoding="UTF-8"?>
+<beans xmlns="http://www.springframework.org/schema/beans"
+ xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
+ xmlns:context="http://www.springframework.org/schema/context"
+ xmlns:tx="http://www.springframework.org/schema/tx"
+ xsi:schemaLocation="http://www.springframework.org/schema/beans
+ http://www.springframework.org/schema/beans/spring-beans-3.1.xsd
+ http://www.springframework.org/schema/context
+ http://www.springframework.org/schema/context/spring-context-2.5.xsd
+ http://www.springframework.org/schema/tx
+ http://www.springframework.org/schema/tx/spring-tx-2.5.xsd">
+
+ <bean id="dataSource" class="org.unitils.database.UnitilsDataSourceFactoryBean"/>
+
+</beans>
--- /dev/null
+<?xml version="1.0" encoding="UTF-8"?><!--
+ generated by Jailer 4.3, Mon Oct 06 13:11:21 CEST 2014 from cmathew@cmbgbm-t530
+
+ Extraction Model: TaxonBase where uuid like '8217ef77-2ab1-4318-bd67-ccd0cdef07c4' (extractionmodel/by-example/SbE-TaxonBase-13-09-59-049.csv)
+ Database URL: jdbc:mysql://127.0.0.1:3306/local-cyprus
+ Database User: root
+
+ Exported Rows: 2
+ TaxonBase 1
+ TaxonNameBase 1
+
+--><dataset>
+ <TaxonNameBase DTYPE="BotanicalName" id="32" created="2010-12-21 15:09:43.0" uuid="f8be96d0-9af9-4e19-b9f1-52a4c0ecc580" protectedtitlecache="true" titleCache="Achillea arabica Kotschy" fullTitleCache="Achillea arabica Kotschy" parsingproblem="0" problemends="-1" problemstarts="-1" protectedfulltitlecache="false" authorshipcache="Kotschy" binomhybrid="false" genusoruninomial="Achillea" hybridformula="false" monomhybrid="false" namecache="Achillea arabica" protectedauthorshipcache="false" protectednamecache="false" specificepithet="arabica" trinomhybrid="false" anamorphic="false" createdby_id="11" homotypicalgroup_id="32" rank_id="778" />
+
+ <TaxonBase DTYPE="Taxon" id="32" created="2011-03-01 20:11:26.0" uuid="8217ef77-2ab1-4318-bd67-ccd0cdef07c4" updated="2014-09-17 09:27:47.0" protectedtitlecache="true" titleCache="Achillea arabica Kotschy sec. Cyprus" doubtful="false" usenamecache="false" excluded="false" taxonstatusunknown="false" taxonomicchildrencount="0" unplaced="false" createdby_id="11" name_id="32" sec_id="10" publish="true"/>
+
+
+</dataset>
--- /dev/null
+<?xml version="1.0" encoding="UTF-8"?><!--
+ generated by Jailer 4.3, Thu Oct 09 18:00:09 CEST 2014 from cmathew@cmbgbm-t530
+
+ Extraction Model: PolytomousKey where uuid like '0d53ba20-7de4-4baa-bd8a-401048447d66' (extractionmodel/by-example/SbE-PolytomousKey-17-59-56-907.csv)
+ Database URL: jdbc:mysql://127.0.0.1:3306/local-cyprus
+ Database User: root
+
+ Exported Rows: 79
+ AgentBase 1
+ Credit 1
+ Extension 1
+ KeyStatement 10
+ KeyStatement_LanguageString 10
+ LanguageString 19
+ OriginalSourceBase 2
+ PolytomousKey 2
+ PolytomousKeyNode 10
+ PolytomousKeyNode_LanguageString 9
+ PolytomousKey_Credit 1
+ PolytomousKey_Extension 1
+ PolytomousKey_OriginalSourceBase 2
+ PolytomousKey_RightsInfo 1
+ PolytomousKey_Taxon 1
+ RightsInfo 1
+ TaxonBase 6
+
+--><dataset>
+ <PolytomousKey_Extension PolytomousKey_id="1550" extensions_id="10"/>
+
+ <PolytomousKey_Credit PolytomousKey_id="1550" credits_id="20" sortIndex="0"/>
+
+ <PolytomousKeyNode_LanguageString PolytomousKeyNode_id="2751" modifyingtext_id="13780" modifyingtext_mapkey_id="124"/>
+ <PolytomousKeyNode_LanguageString PolytomousKeyNode_id="2752" modifyingtext_id="13781" modifyingtext_mapkey_id="124"/>
+ <PolytomousKeyNode_LanguageString PolytomousKeyNode_id="2753" modifyingtext_id="13795" modifyingtext_mapkey_id="124"/>
+ <PolytomousKeyNode_LanguageString PolytomousKeyNode_id="2754" modifyingtext_id="13788" modifyingtext_mapkey_id="124"/>
+ <PolytomousKeyNode_LanguageString PolytomousKeyNode_id="2755" modifyingtext_id="13785" modifyingtext_mapkey_id="124"/>
+ <PolytomousKeyNode_LanguageString PolytomousKeyNode_id="2756" modifyingtext_id="13787" modifyingtext_mapkey_id="124"/>
+ <PolytomousKeyNode_LanguageString PolytomousKeyNode_id="2757" modifyingtext_id="13794" modifyingtext_mapkey_id="124"/>
+ <PolytomousKeyNode_LanguageString PolytomousKeyNode_id="2758" modifyingtext_id="13791" modifyingtext_mapkey_id="124"/>
+ <PolytomousKeyNode_LanguageString PolytomousKeyNode_id="2759" modifyingtext_id="13793" modifyingtext_mapkey_id="124"/>
+
+ <LanguageString id="13780" created="2014-03-10 10:03:09.0" uuid="cceaa60b-61f4-4c8a-bb0e-d45f0fa3e2dc" text="Modifying Text 1a" language_id="124"/>
+ <LanguageString id="13781" created="2014-03-10 10:03:17.0" uuid="01a0ace4-de49-4725-9909-e881fb13035d" text="" language_id="124"/>
+ <LanguageString id="13782" created="2014-03-10 10:03:48.0" uuid="ec0fea40-69dd-4c3e-ab7a-34948037a069" updated="2014-03-10 10:06:32.0" text="Capitula with ligulate ray-florets; leaves pinnatisect" createdby_id="30" updatedby_id="30" language_id="124"/>
+ <LanguageString id="13783" created="2014-03-10 10:04:03.0" uuid="82f8a3a0-567f-4d89-ba10-3f3699111d55" updated="2014-03-10 10:06:32.0" text="Ray-florets yellow" createdby_id="30" updatedby_id="30" language_id="124"/>
+ <LanguageString id="13784" created="2014-03-10 10:04:21.0" uuid="4270501f-1efc-45c2-9e8f-c65f120e8f4c" updated="2014-03-10 10:06:32.0" text="Stem thinly pilose; leaves 10-15 mm wide, with spreading linear-subulate segments; perennial herb" createdby_id="30" updatedby_id="30" language_id="124"/>
+ <LanguageString id="13785" created="2014-03-10 10:04:07.0" uuid="813f5fd6-c8f6-43e8-9a2b-1464f3ba052a" updated="2014-03-10 10:06:32.0" text="" createdby_id="30" updatedby_id="30" language_id="124"/>
+ <LanguageString id="13786" created="2014-03-10 10:04:53.0" uuid="ba17ac94-632f-4d69-ac89-a882e19ff1c5" updated="2014-03-10 10:06:32.0" text="Stem white-tomentose; leaves 1-3 mm wide, with minute overlapping, transverse segments; small subshrubs with a woody base" createdby_id="30" updatedby_id="30" language_id="124"/>
+ <LanguageString id="13787" created="2014-03-10 10:04:34.0" uuid="ab219a5d-e0c4-45fd-8405-6693c3fb8abf" updated="2014-03-10 10:06:32.0" text="" createdby_id="30" updatedby_id="30" language_id="124"/>
+ <LanguageString id="13788" created="2014-03-10 10:03:53.0" uuid="2baec690-422d-4f85-bcfd-24f5718cbecf" updated="2014-03-10 10:06:32.0" text="" createdby_id="30" updatedby_id="30" language_id="124"/>
+ <LanguageString id="13789" created="2014-03-10 10:05:16.0" uuid="7c6a7984-8e6f-48b1-86b2-d5d643199bf3" updated="2014-03-10 10:06:32.0" text="Ray-florets white" createdby_id="30" updatedby_id="30" language_id="124"/>
+ <LanguageString id="13790" created="2014-03-10 10:05:34.0" uuid="72bd8bc9-1904-47ab-8bec-b9296a98b244" updated="2014-03-10 10:06:32.0" text="Perennial herb; stem pilose, hairy or glabrescent, but not tomentose; ligules 1-2 mm diam." createdby_id="30" updatedby_id="30" language_id="124"/>
+ <LanguageString id="13791" created="2014-03-10 10:05:20.0" uuid="c917e3fb-e48b-4207-b77d-c1c108e37906" updated="2014-03-10 10:06:32.0" text="" createdby_id="30" updatedby_id="30" language_id="124"/>
+ <LanguageString id="13792" created="2014-03-10 10:06:15.0" uuid="c5dd35d8-da6a-4d05-b30c-6b55220bd989" updated="2014-03-10 10:06:32.0" text="Shrub with a woody base; stem white-tomentose or woolly; ligules 4-5 mm diam." createdby_id="30" updatedby_id="30" language_id="124"/>
+ <LanguageString id="13793" created="2014-03-10 10:06:03.0" uuid="227a17f6-1ca1-4d06-8480-25711b614863" updated="2014-03-10 10:06:32.0" text="" createdby_id="30" updatedby_id="30" language_id="124"/>
+ <LanguageString id="13794" created="2014-03-10 10:05:07.0" uuid="2c434ab1-8ca7-4464-b5cd-4cee40db41ed" updated="2014-03-10 10:06:32.0" text="" createdby_id="30" updatedby_id="30" language_id="124"/>
+ <LanguageString id="13795" created="2014-03-10 10:03:38.0" uuid="27190d54-f53b-401e-820c-edfb36d4bcbf" updated="2014-03-10 10:06:32.0" text="" createdby_id="30" updatedby_id="30" language_id="124"/>
+ <LanguageString id="13796" created="2014-03-10 10:03:25.0" uuid="69cffb28-8a85-478f-bcae-533e20938ccd" updated="2014-03-10 10:06:32.0" text="Capitula without ligulate ray-florets; leaves entire or subentire" createdby_id="30" updatedby_id="30" language_id="124"/>
+ <LanguageString id="14570" created="2014-10-09 15:42:33.0" uuid="84967760-6dbe-4af4-8e0c-309f1af6ce20" updated="2014-10-09 15:42:44.0" text="Question 1" createdby_id="10" updatedby_id="10" language_id="124"/>
+ <LanguageString id="14571" created="2014-10-09 15:42:55.0" uuid="d82f37b1-f51d-42c1-a291-0c7820db155e" updated="2014-10-09 15:43:03.0" text="Question 2" createdby_id="10" updatedby_id="10" language_id="124"/>
+
+ <TaxonBase DTYPE="Taxon" id="32" created="2011-03-01 20:11:26.0" uuid="8217ef77-2ab1-4318-bd67-ccd0cdef07c4" protectedtitlecache="false" titleCache="Achillea arabica Kotschy sec. Cyprus" doubtful="false" usenamecache="false" excluded="false" taxonstatusunknown="false" taxonomicchildrencount="0" unplaced="false" createdby_id="11" sec_id="10" publish="true"/>
+ <TaxonBase DTYPE="Taxon" id="35" created="2010-12-21 15:09:43.0" uuid="fade44fd-34b2-455f-861a-d1372b866f06" protectedtitlecache="false" titleCache="Achillea sec. Cyprus" doubtful="false" usenamecache="false" excluded="false" taxonstatusunknown="false" taxonomicchildrencount="0" unplaced="false" createdby_id="11" sec_id="10" publish="true"/>
+ <TaxonBase DTYPE="Taxon" id="36" created="2011-03-01 20:11:26.0" uuid="05f0a2e1-e3c3-4e74-8fec-8a0ae89236c3" protectedtitlecache="false" titleCache="Achillea cretica L. sec. Cyprus" doubtful="false" usenamecache="false" excluded="false" taxonstatusunknown="false" taxonomicchildrencount="0" unplaced="false" createdby_id="11" sec_id="10" publish="true"/>
+ <TaxonBase DTYPE="Taxon" id="37" created="2011-03-01 20:11:26.0" uuid="0f8d18a9-e861-48e8-bfab-83e01a379bc0" protectedtitlecache="false" titleCache="Achillea maritima (L.)Ehrend. & Y.-P. Guo subsp. maritima sec. Cyprus" doubtful="false" usenamecache="false" excluded="false" taxonstatusunknown="false" taxonomicchildrencount="0" unplaced="false" createdby_id="11" sec_id="10" publish="true"/>
+ <TaxonBase DTYPE="Taxon" id="40" created="2010-12-21 15:09:43.0" uuid="2b336df7-29e8-4f79-985f-66502739d22f" protectedtitlecache="false" titleCache="Achillea millefolium L. sec. Cyprus" doubtful="false" usenamecache="false" excluded="false" taxonstatusunknown="false" taxonomicchildrencount="0" unplaced="false" createdby_id="11" sec_id="10" publish="true"/>
+ <TaxonBase DTYPE="Taxon" id="41" created="2011-03-01 20:11:26.0" uuid="094e1af8-efd8-4605-b037-b4f715379562" protectedtitlecache="false" titleCache="Achillea santolinoides subsp. wilhelmsii (K. Koch) Greuter sec. Cyprus" doubtful="false" usenamecache="false" excluded="false" taxonstatusunknown="false" taxonomicchildrencount="0" unplaced="false" createdby_id="11" sec_id="10" publish="true"/>
+
+ <PolytomousKey_Taxon polytomousKey_id="1550" taxon_id="35"/>
+
+ <RightsInfo id="10" created="2014-10-09 15:45:53.0" uuid="bdfb572b-be25-45e7-9349-22a9da43531f" updated="2014-10-09 15:48:01.0" text="Rights Text Test" createdby_id="10" updatedby_id="10" agent_id="4808" type_id="2056"/>
+
+ <PolytomousKeyNode id="2750" created="2014-03-10 10:02:35.0" uuid="75e4c924-ff58-4ee7-a59d-fd9173517d08" updated="2014-03-10 10:02:42.0" nodenumber="1" createdby_id="30" updatedby_id="30" key_id="1550" question_id="2760"/>
+ <PolytomousKeyNode id="2751" created="2014-03-10 10:02:52.0" uuid="23e51ff7-11b1-443b-aff2-3fe8b5ace9fe" sortindex="0" key_id="1550" statement_id="2467" subkey_id="751" taxon_id="37" parent_id="2750"/>
+ <PolytomousKeyNode id="2752" created="2014-03-10 10:03:16.0" uuid="dcf326f7-c0ad-4e76-b64e-43aea11f767c" key_id="1550"/>
+ <PolytomousKeyNode id="2753" created="2014-03-10 10:03:38.0" uuid="b775c027-13c0-4b87-8aa9-712faeaafbdc" updated="2014-03-10 10:06:32.0" nodenumber="2" sortindex="1" createdby_id="30" updatedby_id="30" key_id="1550" question_id="2761" statement_id="2460" subkey_id="751" parent_id="2750"/>
+ <PolytomousKeyNode id="2754" created="2014-03-10 10:03:52.0" uuid="df5d5922-35de-43d5-9d46-7730ae28eeb3" updated="2014-03-10 10:06:32.0" nodenumber="3" sortindex="0" createdby_id="30" updatedby_id="30" key_id="1550" statement_id="2461" subkey_id="751" parent_id="2753"/>
+ <PolytomousKeyNode id="2755" created="2014-03-10 10:04:07.0" uuid="0c8583ee-399e-433c-b76b-272c54dbd9f5" updated="2014-03-10 10:06:32.0" sortindex="0" createdby_id="30" updatedby_id="30" key_id="1550" statement_id="2462" taxon_id="32" parent_id="2754"/>
+ <PolytomousKeyNode id="2756" created="2014-03-10 10:04:34.0" uuid="a10e1e61-82c0-470e-a245-10a927b80c9a" updated="2014-03-10 10:06:32.0" sortindex="1" createdby_id="30" updatedby_id="30" key_id="1550" statement_id="2463" taxon_id="41" parent_id="2754"/>
+ <PolytomousKeyNode id="2757" created="2014-03-10 10:05:07.0" uuid="19f7a6a2-4c55-49cb-8b92-d68a9fd9074c" updated="2014-03-10 10:06:32.0" nodenumber="4" sortindex="1" createdby_id="30" updatedby_id="30" key_id="1550" statement_id="2464" parent_id="2753"/>
+ <PolytomousKeyNode id="2758" created="2014-03-10 10:05:20.0" uuid="0a4d86d1-fba5-4088-8dcc-6f0e7268ca5b" updated="2014-03-10 10:06:32.0" sortindex="0" createdby_id="30" updatedby_id="30" key_id="1550" statement_id="2465" taxon_id="40" parent_id="2757"/>
+ <PolytomousKeyNode id="2759" created="2014-03-10 10:06:03.0" uuid="827c9df4-ac15-4163-95ab-616d51f62803" updated="2014-03-10 10:06:32.0" sortindex="1" createdby_id="30" updatedby_id="30" key_id="1550" statement_id="2466" taxon_id="36" parent_id="2757"/>
+
+ <Credit id="20" created="2014-10-09 15:45:22.0" uuid="aa412b15-ee6c-4834-b14e-a66969cb398d" updated="2014-10-09 15:48:01.0" text="Credits Text Test" createdby_id="10" updatedby_id="10" language_id="124" agent_id="4809"/>
+
+ <KeyStatement id="2460" created="2014-03-10 10:03:48.0" uuid="66da6df7-784c-4d5a-9378-58b2cf92ba13" updated="2014-03-10 10:06:32.0" createdby_id="30" updatedby_id="30"/>
+ <KeyStatement id="2461" created="2014-03-10 10:04:03.0" uuid="f9cfd498-de47-48fd-b38c-43cf57b63750" updated="2014-03-10 10:06:32.0" createdby_id="30" updatedby_id="30"/>
+ <KeyStatement id="2462" created="2014-03-10 10:04:21.0" uuid="817fb39e-91d4-4d8c-a942-6acab47575d1" updated="2014-03-10 10:06:32.0" createdby_id="30" updatedby_id="30"/>
+ <KeyStatement id="2463" created="2014-03-10 10:04:53.0" uuid="6b571b86-7764-4f27-925c-ae5e2653f7ad" updated="2014-03-10 10:06:32.0" createdby_id="30" updatedby_id="30"/>
+ <KeyStatement id="2464" created="2014-03-10 10:05:16.0" uuid="91bbb534-abdf-4915-9f6f-a0cb41f8cf58" updated="2014-03-10 10:06:32.0" createdby_id="30" updatedby_id="30"/>
+ <KeyStatement id="2465" created="2014-03-10 10:05:34.0" uuid="1991ca31-2630-4917-8db3-eb67cec8f231" updated="2014-03-10 10:06:32.0" createdby_id="30" updatedby_id="30"/>
+ <KeyStatement id="2466" created="2014-03-10 10:06:15.0" uuid="3e1bbc59-b098-4533-ac35-245e1140a0ae" updated="2014-03-10 10:06:32.0" createdby_id="30" updatedby_id="30"/>
+ <KeyStatement id="2467" created="2014-03-10 10:03:24.0" uuid="68fd99f6-64ce-4bb8-a6af-d2cf2c046e2c" updated="2014-03-10 10:06:32.0" createdby_id="30" updatedby_id="30"/>
+ <KeyStatement id="2760" created="2014-10-09 15:42:33.0" uuid="b9702653-f620-4208-bda9-a6fe082004d1" updated="2014-10-09 15:42:44.0" createdby_id="10" updatedby_id="10"/>
+ <KeyStatement id="2761" created="2014-10-09 15:42:55.0" uuid="688a432f-4b57-4c6f-a8f6-0c468a28cb7c" updated="2014-10-09 15:43:03.0" createdby_id="10" updatedby_id="10"/>
+
+ <AgentBase DTYPE="Person" id="4809" created="2010-12-21 15:09:59.0" uuid="945d08f2-eb92-45b6-9252-6275ea6d338b" protectedtitlecache="false" titleCache="R. A. Graham" nomenclaturaltitle="R. A. Graham" createdby_id="11"/>
+
+ <Extension id="10" created="2014-10-09 15:45:41.0" uuid="0d6f35d7-7e76-446a-a017-7e8355ee1b4c" updated="2014-10-09 15:48:01.0" extendedObj_type="eu.etaxonomy.cdm.model.description.PolytomousKey" extendedObj_id="1550" value="http://test.com" createdby_id="10" updatedby_id="10" type_id="2075"/>
+
+ <PolytomousKey_OriginalSourceBase PolytomousKey_id="1550" sources_id="23710"/>
+ <PolytomousKey_OriginalSourceBase PolytomousKey_id="1550" sources_id="23711"/>
+
+ <PolytomousKey_RightsInfo PolytomousKey_id="1550" rights_id="10"/>
+
+ <KeyStatement_LanguageString KeyStatement_id="2460" label_id="13782" label_mapkey_id="124"/>
+ <KeyStatement_LanguageString KeyStatement_id="2461" label_id="13783" label_mapkey_id="124"/>
+ <KeyStatement_LanguageString KeyStatement_id="2462" label_id="13784" label_mapkey_id="124"/>
+ <KeyStatement_LanguageString KeyStatement_id="2463" label_id="13786" label_mapkey_id="124"/>
+ <KeyStatement_LanguageString KeyStatement_id="2464" label_id="13789" label_mapkey_id="124"/>
+ <KeyStatement_LanguageString KeyStatement_id="2465" label_id="13790" label_mapkey_id="124"/>
+ <KeyStatement_LanguageString KeyStatement_id="2466" label_id="13792" label_mapkey_id="124"/>
+ <KeyStatement_LanguageString KeyStatement_id="2467" label_id="13796" label_mapkey_id="124"/>
+ <KeyStatement_LanguageString KeyStatement_id="2760" label_id="14570" label_mapkey_id="124"/>
+ <KeyStatement_LanguageString KeyStatement_id="2761" label_id="14571" label_mapkey_id="124"/>
+
+ <PolytomousKey id="751" created="2013-03-24 11:17:08.0" uuid="9d8bf4f6-a70a-4b80-8556-2ccfb436ff01" protectedtitlecache="true" titleCache="Asphodeline" createdby_id="30" startNumber="1"/>
+ <PolytomousKey id="1550" created="2014-03-10 10:02:35.0" uuid="0d53ba20-7de4-4baa-bd8a-401048447d66" updated="2014-03-10 10:02:42.0" protectedtitlecache="true" titleCache="Achillea" createdby_id="30" updatedby_id="30" root_id="2750" startNumber="1"/>
+
+ <OriginalSourceBase DTYPE="IdentifiableSource" id="23710" created="2014-03-10 10:06:57.0" uuid="95e05e82-499d-4b8a-ad6b-1085f74a7496" updated="2014-03-10 10:07:33.0" sourcedObj_type="eu.etaxonomy.cdm.model.description.PolytomousKey" sourcedObj_id="1550" createdby_id="30" updatedby_id="30" citation_id="1730" sourceType="PTS"/>
+ <OriginalSourceBase DTYPE="IdentifiableSource" id="23711" created="2014-03-10 10:06:48.0" uuid="f77555fe-0d98-4c9f-98ed-a5bca6b1e342" updated="2014-03-10 10:07:33.0" sourcedObj_type="eu.etaxonomy.cdm.model.description.PolytomousKey" sourcedObj_id="1550" createdby_id="30" updatedby_id="30" citation_id="50" sourceType="PTS"/>
+
+ <LanguageString id="10"/>
+</dataset>
--- /dev/null
+<?xml version="1.0" encoding="UTF-8"?><!--
+ generated by Jailer 4.3, Mon Jun 29 14:15:44 CEST 2015 from cmathew@cmbgbm-t530
+
+ Extraction Model: PolytomousKey where id = 90 or id = 111 or id = 112 or id = 113 or id = 114 or id = 115 or id = 116 (extractionmodel/by-example/SbE-PolytomousKey-14-15-18-725.csv)
+ Database URL: jdbc:mysql://127.0.0.1:3306/local-cyprus
+ Database User: root
+
+ Exported Rows: 10
+ PolytomousKey 7
+ PolytomousKeyNode 3
+
+--><dataset>
+ <PolytomousKeyNode id="100" created="2012-11-23 19:53:37.0" uuid="c8e296da-441d-403b-9647-d729c00b2aa4" updated="2014-01-24 13:21:03.0" nodenumber="1" key_id="90"/>
+ <PolytomousKeyNode id="101" created="2012-11-23 19:53:54.0" uuid="588754cd-6098-40d3-bb37-05d0a6676336" sortindex="0" key_id="90" parent_id="100"/>
+ <PolytomousKeyNode id="102" created="2012-11-23 19:54:42.0" uuid="52ea0b19-f29e-49fc-8326-02292fda4e43" sortindex="1" key_id="90" parent_id="100"/>
+
+ <PolytomousKey id="90" created="2012-11-23 19:53:37.0" uuid="f82cef88-5a9e-4917-9938-d08bda40836f" protectedtitlecache="true" titleCache="Cleome" root_id="100" startNumber="1"/>
+ <PolytomousKey id="111" created="2013-02-15 16:26:38.0" uuid="a00ca7ec-b660-433c-bd14-596826ab2243" protectedtitlecache="true" titleCache="Ammi" startNumber="1"/>
+ <PolytomousKey id="112" created="2013-02-15 16:31:54.0" uuid="197bc542-bf5b-4a52-aa66-c65df32c196b" protectedtitlecache="true" titleCache="Adonis" startNumber="1"/>
+ <PolytomousKey id="113" created="2013-02-15 16:50:59.0" uuid="2ebacbb0-13f4-4407-8579-d5968e09a905" protectedtitlecache="true" titleCache="Enarthrocarpus" startNumber="1"/>
+ <PolytomousKey id="114" created="2013-02-15 16:54:31.0" uuid="0426418c-5b76-4c19-8177-6bebb4d37329" protectedtitlecache="true" titleCache="Glaucium" startNumber="1"/>
+ <PolytomousKey id="115" created="2013-02-15 17:05:42.0" uuid="6aa69b73-6242-4d3d-85c9-485aab9b1975" protectedtitlecache="true" titleCache="Sagina" startNumber="1"/>
+ <PolytomousKey id="116" created="2013-02-15 17:09:43.0" uuid="cfe7626d-49cc-4dac-acbc-601825deb44a" protectedtitlecache="true" titleCache="Dianthus" startNumber="1"/>
+
+
+</dataset>
--- /dev/null
+<?xml version="1.0" encoding="UTF-8"?><!--
+ generated by Jailer 4.3, Fri Jun 19 09:13:03 CEST 2015 from cmathew@cmbgbm-t530
+
+ Extraction Model: all rows from Classification (extractionmodel/by-example/SbE-Classification-09-10-20-259.csv)
+ Database URL: jdbc:mysql://127.0.0.1:3306/local-cyprus
+ Database User: root
+
+ Exported Rows: 67
+ Classification 1
+ DescriptionBase 22
+ TaxonBase 14
+ TaxonNameBase 14
+ TaxonNode 16
+
+--><dataset>
+ <TaxonNode id="46" created="2010-12-21 15:09:43.0" uuid="168a4d09-a2b0-4206-b4cc-5d13199f9306" countchildren="0" classification_id="10" parent_id="47" taxon_id="48" treeIndex="#t10#4032#49#48#47#46#" sortIndex="0"/>
+ <TaxonNode id="47" created="2010-12-21 15:09:43.0" uuid="2f05d429-632d-4230-b9cb-70299360b470" countchildren="1" classification_id="10" parent_id="48" taxon_id="51" treeIndex="#t10#4032#49#48#47#" sortIndex="0"/>
+ <TaxonNode id="48" created="2010-12-21 15:09:43.0" uuid="24773d3b-8f11-4400-99de-71658982b245" countchildren="6" classification_id="10" parent_id="49" treeIndex="#t10#4032#49#48#" sortIndex="0"/>
+ <TaxonNode id="49" created="2010-12-21 15:09:43.0" uuid="572290a9-7535-48c8-9f68-25ddbc9869ee" countchildren="10" classification_id="10" parent_id="4032" taxon_id="49" treeIndex="#t10#4032#49#" sortIndex="0"/>
+ <TaxonNode id="236" created="2010-12-21 15:09:45.0" uuid="f5d97f8b-c673-4050-af06-bbfab33baaec" countchildren="0" classification_id="10" parent_id="237" taxon_id="264" treeIndex="#t10#4032#49#48#237#236#" sortIndex="0"/>
+ <TaxonNode id="237" created="2010-12-21 15:09:45.0" uuid="4998de90-d0be-433b-a62f-0d57a1e399b0" countchildren="1" classification_id="10" parent_id="48" taxon_id="265" treeIndex="#t10#4032#49#48#237#" sortIndex="1"/>
+ <TaxonNode id="714" created="2010-12-21 15:09:48.0" uuid="b85b5b78-6760-409f-ac91-bb89e95ff2a1" countchildren="0" classification_id="10" parent_id="715" taxon_id="812" treeIndex="#t10#4032#49#48#715#714#" sortIndex="0"/>
+ <TaxonNode id="715" created="2010-12-21 15:09:48.0" uuid="91698cec-615f-4472-9002-feda1a6acded" countchildren="2" classification_id="10" parent_id="48" taxon_id="814" treeIndex="#t10#4032#49#48#715#" sortIndex="2"/>
+ <TaxonNode id="716" created="2010-12-21 15:09:48.0" uuid="6ad8e9e2-f5f6-41ad-aa30-f62a903650db" countchildren="0" classification_id="10" parent_id="715" taxon_id="815" treeIndex="#t10#4032#49#48#715#716#" sortIndex="1"/>
+ <TaxonNode id="828" created="2010-12-21 15:09:49.0" uuid="786622ba-cb2c-47f4-9eeb-65a6ebb7122b" countchildren="0" classification_id="10" parent_id="829" taxon_id="946" treeIndex="#t10#4032#49#48#829#828#" sortIndex="0"/>
+ <TaxonNode id="829" created="2010-12-21 15:09:49.0" uuid="4fe03763-b966-4361-8334-352f6f777588" countchildren="1" classification_id="10" parent_id="48" taxon_id="948" treeIndex="#t10#4032#49#48#829#" sortIndex="3"/>
+ <TaxonNode id="1915" created="2010-12-21 15:09:57.0" uuid="99f03b56-67cd-4e01-9ceb-2362d48f9d07" countchildren="0" classification_id="10" parent_id="1916" taxon_id="2203" treeIndex="#t10#4032#49#48#1916#1915#" sortIndex="0"/>
+ <TaxonNode id="1916" created="2010-12-21 15:09:57.0" uuid="d8998200-500f-4312-90f4-2b60e6fd3a78" countchildren="1" classification_id="10" parent_id="48" taxon_id="2205" treeIndex="#t10#4032#49#48#1916#" sortIndex="4"/>
+ <TaxonNode id="2354" created="2010-12-21 15:10:00.0" uuid="b8439f51-6b96-445a-b401-7a836ba1cf58" countchildren="0" classification_id="10" parent_id="2355" taxon_id="2737" treeIndex="#t10#4032#49#48#2355#2354#" sortIndex="0"/>
+ <TaxonNode id="2355" created="2010-12-21 15:10:00.0" uuid="6da4e5b6-ebc3-4c46-bdce-24161b7bd0e2" countchildren="1" classification_id="10" parent_id="48" taxon_id="2738" treeIndex="#t10#4032#49#48#2355#" sortIndex="5"/>
+ <TaxonNode id="4032" created="2014-01-16 10:24:29.0" uuid="29b3fd3f-29b4-4011-ab12-9c1ad1607dbd" countchildren="1" classification_id="10" treeIndex="#t10#4032#"/>
+
+ <TaxonNameBase DTYPE="BotanicalName" id="48" created="2010-12-21 15:09:43.0" uuid="7aceb517-2b91-46b9-a5a2-88b7e0fb3230" protectedtitlecache="false" titleCache="Adiantum capillus-veneris L." fullTitleCache="Adiantum capillus-veneris L." parsingproblem="0" problemends="-1" problemstarts="-1" protectedfulltitlecache="false" authorshipcache="L." binomhybrid="false" genusoruninomial="Adiantum" hybridformula="false" monomhybrid="false" namecache="Adiantum capillus-veneris" protectedauthorshipcache="false" protectednamecache="false" specificepithet="capillus-veneris" trinomhybrid="false" anamorphic="false" rank_id="778" />
+ <TaxonNameBase DTYPE="BotanicalName" id="49" created="2010-12-21 15:09:43.0" uuid="079fff38-ff2d-426b-a49e-70b0f1db6c31" protectedtitlecache="false" titleCache="Pteridophyta" fullTitleCache="Pteridophyta" parsingproblem="0" problemends="-1" problemstarts="-1" protectedfulltitlecache="false" authorshipcache="" binomhybrid="false" genusoruninomial="Pteridophyta" hybridformula="false" monomhybrid="false" namecache="Pteridophyta" protectedauthorshipcache="false" protectednamecache="false" trinomhybrid="false" anamorphic="false" rank_id="810"/>
+ <TaxonNameBase DTYPE="BotanicalName" id="51" created="2010-12-21 15:09:43.0" uuid="c8af63e0-7bd4-4fad-aa2d-3777cbe1210a" protectedtitlecache="false" titleCache="Adiantum" fullTitleCache="Adiantum" parsingproblem="0" problemends="-1" problemstarts="-1" protectedfulltitlecache="false" authorshipcache="" binomhybrid="false" genusoruninomial="Adiantum" hybridformula="false" monomhybrid="false" namecache="Adiantum" protectedauthorshipcache="false" protectednamecache="false" trinomhybrid="false" anamorphic="false" rank_id="788"/>
+ <TaxonNameBase DTYPE="BotanicalName" id="264" created="2010-12-21 15:09:45.0" uuid="b976da6a-dd84-4fcd-9a1b-9847afba1da2" protectedtitlecache="false" titleCache="Anogramma leptophylla (L.) Link" fullTitleCache="Anogramma leptophylla (L.) Link" parsingproblem="0" problemends="-1" problemstarts="-1" protectedfulltitlecache="false" authorshipcache="(L.) Link" binomhybrid="false" genusoruninomial="Anogramma" hybridformula="false" monomhybrid="false" namecache="Anogramma leptophylla" protectedauthorshipcache="false" protectednamecache="false" specificepithet="leptophylla" trinomhybrid="false" anamorphic="false" rank_id="778" />
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+ <TaxonNameBase DTYPE="BotanicalName" id="812" created="2010-12-21 15:09:48.0" uuid="16450a2d-2085-471f-804a-defcd43c03e4" protectedtitlecache="false" titleCache="Cheilanthes acrostica (Balb.) Tod." fullTitleCache="Cheilanthes acrostica (Balb.) Tod." parsingproblem="0" problemends="-1" problemstarts="-1" protectedfulltitlecache="false" authorshipcache="(Balb.) Tod." binomhybrid="false" genusoruninomial="Cheilanthes" hybridformula="false" monomhybrid="false" namecache="Cheilanthes acrostica" protectedauthorshipcache="false" protectednamecache="false" specificepithet="acrostica" trinomhybrid="false" anamorphic="false" rank_id="778" />
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+
+ <SynonymRelationship/>
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+ <LanguageString id="10"/>
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--- /dev/null
+<?xml version="1.0" encoding="UTF-8"?><!--
+ generated by Jailer 4.3, Wed Mar 04 16:11:14 CET 2015 from cmathew@cmbgbm-t530
+
+ Extraction Model: all rows from Classification (extractionmodel/by-example/SbE-Classification-16-11-06-737.csv)
+ Database URL: jdbc:mysql://127.0.0.1:3306/local-cyprus
+ Database User: root
+
+ Exported Rows: 31
+ Classification 1
+ HomotypicalGroup 2
+ SynonymRelationship 1
+ TaxonBase 5
+ TaxonNameBase 3
+ TaxonNode 19
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+--><dataset>
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+
+ <TaxonNode id="347" created="2010-12-21 15:09:45.0" uuid="d425a971-1abe-4895-9e1f-1e5c8ff1c84c" countchildren="0" classification_id="10" taxon_id="387" treeIndex="#t10#4032#49#346#345#347#" sortIndex="1"/>
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+ <HomotypicalGroup id="368" created="2010-12-21 15:09:45.0" uuid="d7eaa174-4efd-4d09-a427-dce4ed6513f7" />
+ <HomotypicalGroup id="375" created="2010-12-21 15:09:46.0" uuid="62ed57d6-2c69-4404-bb95-248a1c9bb24c" />
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+ <TaxonNameBase DTYPE="BotanicalName" id="387" created="2010-12-21 15:09:45.0" uuid="d25985c7-6fb4-4b31-8a94-5d7c5ba6ad16" protectedtitlecache="false" titleCache="Asplenium ceterach L." fullTitleCache="Asplenium ceterach L." parsingproblem="0" problemends="-1" problemstarts="-1" protectedfulltitlecache="false" authorshipcache="L." binomhybrid="false" genusoruninomial="Asplenium" hybridformula="false" monomhybrid="false" namecache="Asplenium ceterach" protectedauthorshipcache="false" protectednamecache="false" specificepithet="ceterach" trinomhybrid="false" anamorphic="false" homotypicalgroup_id="368" rank_id="778" />
+ <TaxonNameBase DTYPE="BotanicalName" id="388" created="2010-12-21 15:09:45.0" uuid="747021f1-cf5f-4249-a825-228da3368399" protectedtitlecache="true" titleCache="Asplenium cyprium Viane & Van den heede" fullTitleCache="Asplenium cyprium Viane & Van den heede" parsingproblem="16" problemends="-1" problemstarts="-1" protectedfulltitlecache="false" authorshipcache="" binomhybrid="false" hybridformula="false" monomhybrid="false" namecache="Asplenium cyprium Viane & Van den heede" protectedauthorshipcache="false" protectednamecache="true" trinomhybrid="false" anamorphic="false" />
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+ <Classification id="10" created="2010-12-21 15:09:43.0" uuid="0c2b5d25-7b15-4401-8b51-dd4be0ee5cab" protectedtitlecache="false" titleCache="Cyprus" name_id="10" reference_id="10" />
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+ <TaxonBase DTYPE="Taxon" id="387" created="2011-03-01 20:11:27.0" uuid="9763e5f0-6cd4-4d96-b8a4-4420854f7727" protectedtitlecache="false" titleCache="Asplenium ceterach L. sec. Cyprus" doubtful="false" usenamecache="false" excluded="false" taxonstatusunknown="false" taxonomicchildrencount="0" unplaced="false" name_id="387" sec_id="10" publish="true"/>
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+ <TaxonBase DTYPE="Taxon" id="394" created="2011-03-01 20:11:27.0" uuid="aff4fa6f-9aa8-463d-ac07-ec8a1925eb57" protectedtitlecache="false" titleCache="Asplenium viride Huds. sec. Cyprus" doubtful="false" usenamecache="false" excluded="false" taxonstatusunknown="false" taxonomicchildrencount="0" unplaced="false" name_id="394" sec_id="10" publish="true"/>
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+ <SynonymRelationship id="50" created="2010-12-21 15:09:45.0" uuid="60d1466f-5823-4a69-a071-1887d0c1e72b" doubtful="false" partial="false" proparte="false" relatedfrom_id="388" relatedto_id="387" />
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+ <LanguageString id="10"/>
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--- /dev/null
+<?xml version="1.0" encoding="UTF-8"?><!--
+ generated by Jailer 4.3, Mon Jun 22 14:57:08 CEST 2015 from cmathew@cmbgbm-t530
+
+ Extraction Model: all rows from Classification (extractionmodel/by-example/SbE-Classification-14-56-50-312.csv)
+ Database URL: jdbc:mysql://127.0.0.1:3306/local-cyprus
+ Database User: root
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+ Exported Rows: 6
+ Classification 1
+ TaxonBase 2
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+</dataset>
--- /dev/null
+<?xml version="1.0" encoding="UTF-8"?><!--
+ generated by Jailer 4.3, Fri Jun 19 09:13:03 CEST 2015 from cmathew@cmbgbm-t530
+
+ Extraction Model: all rows from Classification (extractionmodel/by-example/SbE-Classification-09-10-20-259.csv)
+ Database URL: jdbc:mysql://127.0.0.1:3306/local-cyprus
+ Database User: root
+
+ Exported Rows: 67
+ Classification 1
+ DescriptionBase 22
+ TaxonBase 14
+ TaxonNameBase 14
+ TaxonNode 16
+
+--><dataset>
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--- /dev/null
+<?xml version="1.0" encoding="UTF-8"?><!--
+ generated by Jailer 4.3, Fri Jun 19 09:13:03 CEST 2015 from cmathew@cmbgbm-t530
+
+ Extraction Model: all rows from Classification (extractionmodel/by-example/SbE-Classification-09-10-20-259.csv)
+ Database URL: jdbc:mysql://127.0.0.1:3306/local-cyprus
+ Database User: root
+
+ Exported Rows: 67
+ Classification 1
+ DescriptionBase 22
+ TaxonBase 14
+ TaxonNameBase 14
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--- /dev/null
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--- /dev/null
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+ generated by Jailer 4.3, Thu Oct 09 18:00:09 CEST 2014 from cmathew@cmbgbm-t530
+
+ Extraction Model: PolytomousKey where uuid like '0d53ba20-7de4-4baa-bd8a-401048447d66' (extractionmodel/by-example/SbE-PolytomousKey-17-59-56-907.csv)
+ Database URL: jdbc:mysql://127.0.0.1:3306/local-cyprus
+ Database User: root
+
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+ PolytomousKey 2
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+ PolytomousKey_RightsInfo 1
+ PolytomousKey_Taxon 1
+ RightsInfo 1
+ TaxonBase 6
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+ <KeyStatement_LanguageString KeyStatement_id="2460" label_id="13782" label_mapkey_id="124"/>
+ <KeyStatement_LanguageString KeyStatement_id="2461" label_id="13783" label_mapkey_id="124"/>
+ <KeyStatement_LanguageString KeyStatement_id="2462" label_id="13784" label_mapkey_id="124"/>
+ <KeyStatement_LanguageString KeyStatement_id="2463" label_id="13786" label_mapkey_id="124"/>
+ <KeyStatement_LanguageString KeyStatement_id="2464" label_id="13789" label_mapkey_id="124"/>
+ <KeyStatement_LanguageString KeyStatement_id="2465" label_id="13790" label_mapkey_id="124"/>
+ <KeyStatement_LanguageString KeyStatement_id="2466" label_id="13792" label_mapkey_id="124"/>
+ <KeyStatement_LanguageString KeyStatement_id="2467" label_id="13796" label_mapkey_id="124"/>
+ <KeyStatement_LanguageString KeyStatement_id="2760" label_id="14570" label_mapkey_id="124"/>
+ <KeyStatement_LanguageString KeyStatement_id="2761" label_id="14571" label_mapkey_id="124"/>
+
+ <PolytomousKey id="751" created="2013-03-24 11:17:08.0" uuid="9d8bf4f6-a70a-4b80-8556-2ccfb436ff01" protectedtitlecache="true" titleCache="Asphodeline" startNumber="1"/>
+ <PolytomousKey id="1550" created="2014-03-10 10:02:35.0" uuid="0d53ba20-7de4-4baa-bd8a-401048447d66" updated="2014-03-10 10:02:42.0" protectedtitlecache="true" titleCache="Achillea" root_id="2750" startNumber="1"/>
+
+ <OriginalSourceBase DTYPE="IdentifiableSource" id="23710" created="2014-03-10 10:06:57.0" uuid="95e05e82-499d-4b8a-ad6b-1085f74a7496" updated="2014-03-10 10:07:33.0" sourcedObj_type="eu.etaxonomy.cdm.model.description.PolytomousKey" sourcedObj_id="1550" sourceType="PTS"/>
+ <OriginalSourceBase DTYPE="IdentifiableSource" id="23711" created="2014-03-10 10:06:48.0" uuid="f77555fe-0d98-4c9f-98ed-a5bca6b1e342" updated="2014-03-10 10:07:33.0" sourcedObj_type="eu.etaxonomy.cdm.model.description.PolytomousKey" sourcedObj_id="1550" sourceType="PTS"/>
+
+</dataset>
--- /dev/null
+<?xml version="1.0" encoding="UTF-8"?><!--
+ generated by Jailer 4.3, Thu Oct 09 18:00:09 CEST 2014 from cmathew@cmbgbm-t530
+
+ Extraction Model: PolytomousKey where uuid like '0d53ba20-7de4-4baa-bd8a-401048447d66' (extractionmodel/by-example/SbE-PolytomousKey-17-59-56-907.csv)
+ Database URL: jdbc:mysql://127.0.0.1:3306/local-cyprus
+ Database User: root
+
+ Exported Rows: 79
+ AgentBase 1
+ Credit 1
+ Extension 1
+ KeyStatement 10
+ KeyStatement_LanguageString 10
+ LanguageString 19
+ OriginalSourceBase 2
+ PolytomousKey 2
+ PolytomousKeyNode 10
+ PolytomousKeyNode_LanguageString 9
+ PolytomousKey_Credit 1
+ PolytomousKey_Extension 1
+ PolytomousKey_OriginalSourceBase 2
+ PolytomousKey_RightsInfo 1
+ PolytomousKey_Taxon 1
+ RightsInfo 1
+ TaxonBase 6
+
+--><dataset>
+ <PolytomousKey_Extension PolytomousKey_id="1550" extensions_id="10"/>
+
+ <PolytomousKey_Credit PolytomousKey_id="1550" credits_id="20" sortIndex="0"/>
+
+ <PolytomousKeyNode_LanguageString PolytomousKeyNode_id="2751" modifyingtext_id="13780" modifyingtext_mapkey_id="124"/>
+ <PolytomousKeyNode_LanguageString PolytomousKeyNode_id="2752" modifyingtext_id="13781" modifyingtext_mapkey_id="124"/>
+ <PolytomousKeyNode_LanguageString PolytomousKeyNode_id="2753" modifyingtext_id="13795" modifyingtext_mapkey_id="124"/>
+ <PolytomousKeyNode_LanguageString PolytomousKeyNode_id="2754" modifyingtext_id="13788" modifyingtext_mapkey_id="124"/>
+ <PolytomousKeyNode_LanguageString PolytomousKeyNode_id="2755" modifyingtext_id="13785" modifyingtext_mapkey_id="124"/>
+ <PolytomousKeyNode_LanguageString PolytomousKeyNode_id="2756" modifyingtext_id="13787" modifyingtext_mapkey_id="124"/>
+ <PolytomousKeyNode_LanguageString PolytomousKeyNode_id="2757" modifyingtext_id="13794" modifyingtext_mapkey_id="124"/>
+ <PolytomousKeyNode_LanguageString PolytomousKeyNode_id="2758" modifyingtext_id="13791" modifyingtext_mapkey_id="124"/>
+ <PolytomousKeyNode_LanguageString PolytomousKeyNode_id="2759" modifyingtext_id="13793" modifyingtext_mapkey_id="124"/>
+
+ <LanguageString id="13780" created="2014-03-10 10:03:09.0" uuid="cceaa60b-61f4-4c8a-bb0e-d45f0fa3e2dc" text="Modifying Text 1a" language_id="124"/>
+ <LanguageString id="13781" created="2014-03-10 10:03:17.0" uuid="01a0ace4-de49-4725-9909-e881fb13035d" text="" language_id="124"/>
+ <LanguageString id="13782" created="2014-03-10 10:03:48.0" uuid="ec0fea40-69dd-4c3e-ab7a-34948037a069" updated="2014-03-10 10:06:32.0" text="Capitula with ligulate ray-florets; leaves pinnatisect" language_id="124"/>
+ <LanguageString id="13783" created="2014-03-10 10:04:03.0" uuid="82f8a3a0-567f-4d89-ba10-3f3699111d55" updated="2014-03-10 10:06:32.0" text="Ray-florets yellow" language_id="124"/>
+ <LanguageString id="13784" created="2014-03-10 10:04:21.0" uuid="4270501f-1efc-45c2-9e8f-c65f120e8f4c" updated="2014-03-10 10:06:32.0" text="Stem thinly pilose; leaves 10-15 mm wide, with spreading linear-subulate segments; perennial herb" language_id="124"/>
+ <LanguageString id="13785" created="2014-03-10 10:04:07.0" uuid="813f5fd6-c8f6-43e8-9a2b-1464f3ba052a" updated="2014-03-10 10:06:32.0" text="" language_id="124"/>
+ <LanguageString id="13786" created="2014-03-10 10:04:53.0" uuid="ba17ac94-632f-4d69-ac89-a882e19ff1c5" updated="2014-03-10 10:06:32.0" text="Stem white-tomentose; leaves 1-3 mm wide, with minute overlapping, transverse segments; small subshrubs with a woody base" language_id="124"/>
+ <LanguageString id="13787" created="2014-03-10 10:04:34.0" uuid="ab219a5d-e0c4-45fd-8405-6693c3fb8abf" updated="2014-03-10 10:06:32.0" text="" language_id="124"/>
+ <LanguageString id="13788" created="2014-03-10 10:03:53.0" uuid="2baec690-422d-4f85-bcfd-24f5718cbecf" updated="2014-03-10 10:06:32.0" text="" language_id="124"/>
+ <LanguageString id="13789" created="2014-03-10 10:05:16.0" uuid="7c6a7984-8e6f-48b1-86b2-d5d643199bf3" updated="2014-03-10 10:06:32.0" text="Ray-florets white" language_id="124"/>
+ <LanguageString id="13790" created="2014-03-10 10:05:34.0" uuid="72bd8bc9-1904-47ab-8bec-b9296a98b244" updated="2014-03-10 10:06:32.0" text="Perennial herb; stem pilose, hairy or glabrescent, but not tomentose; ligules 1-2 mm diam." language_id="124"/>
+ <LanguageString id="13791" created="2014-03-10 10:05:20.0" uuid="c917e3fb-e48b-4207-b77d-c1c108e37906" updated="2014-03-10 10:06:32.0" text="" language_id="124"/>
+ <LanguageString id="13792" created="2014-03-10 10:06:15.0" uuid="c5dd35d8-da6a-4d05-b30c-6b55220bd989" updated="2014-03-10 10:06:32.0" text="Shrub with a woody base; stem white-tomentose or woolly; ligules 4-5 mm diam." language_id="124"/>
+ <LanguageString id="13793" created="2014-03-10 10:06:03.0" uuid="227a17f6-1ca1-4d06-8480-25711b614863" updated="2014-03-10 10:06:32.0" text="" language_id="124"/>
+ <LanguageString id="13794" created="2014-03-10 10:05:07.0" uuid="2c434ab1-8ca7-4464-b5cd-4cee40db41ed" updated="2014-03-10 10:06:32.0" text="" language_id="124"/>
+ <LanguageString id="13795" created="2014-03-10 10:03:38.0" uuid="27190d54-f53b-401e-820c-edfb36d4bcbf" updated="2014-03-10 10:06:32.0" text="" language_id="124"/>
+ <LanguageString id="13796" created="2014-03-10 10:03:25.0" uuid="69cffb28-8a85-478f-bcae-533e20938ccd" updated="2014-03-10 10:06:32.0" text="Capitula without ligulate ray-florets; leaves entire or subentire" language_id="124"/>
+ <LanguageString id="14570" created="2014-10-09 15:42:33.0" uuid="84967760-6dbe-4af4-8e0c-309f1af6ce20" updated="2014-10-09 15:42:44.0" text="Question 1" createdby_id="10" updatedby_id="10" language_id="124"/>
+ <LanguageString id="14571" created="2014-10-09 15:42:55.0" uuid="d82f37b1-f51d-42c1-a291-0c7820db155e" updated="2014-10-09 15:43:03.0" text="Question 2" createdby_id="10" updatedby_id="10" language_id="124"/>
+
+ <TaxonBase DTYPE="Taxon" id="32" created="2011-03-01 20:11:26.0" uuid="8217ef77-2ab1-4318-bd67-ccd0cdef07c4" protectedtitlecache="false" titleCache="Achillea arabica Kotschy sec. Cyprus" doubtful="false" usenamecache="false" excluded="false" taxonstatusunknown="false" taxonomicchildrencount="0" unplaced="false" createdby_id="11" sec_id="10" publish="true"/>
+ <TaxonBase DTYPE="Taxon" id="35" created="2010-12-21 15:09:43.0" uuid="fade44fd-34b2-455f-861a-d1372b866f06" protectedtitlecache="false" titleCache="Achillea sec. Cyprus" doubtful="false" usenamecache="false" excluded="false" taxonstatusunknown="false" taxonomicchildrencount="0" unplaced="false" createdby_id="11" sec_id="10" publish="true"/>
+ <TaxonBase DTYPE="Taxon" id="36" created="2011-03-01 20:11:26.0" uuid="05f0a2e1-e3c3-4e74-8fec-8a0ae89236c3" protectedtitlecache="false" titleCache="Achillea cretica L. sec. Cyprus" doubtful="false" usenamecache="false" excluded="false" taxonstatusunknown="false" taxonomicchildrencount="0" unplaced="false" createdby_id="11" sec_id="10" publish="true"/>
+ <TaxonBase DTYPE="Taxon" id="37" created="2011-03-01 20:11:26.0" uuid="0f8d18a9-e861-48e8-bfab-83e01a379bc0" protectedtitlecache="false" titleCache="Achillea maritima (L.)Ehrend. & Y.-P. Guo subsp. maritima sec. Cyprus" doubtful="false" usenamecache="false" excluded="false" taxonstatusunknown="false" taxonomicchildrencount="0" unplaced="false" createdby_id="11" sec_id="10" publish="true"/>
+ <TaxonBase DTYPE="Taxon" id="40" created="2010-12-21 15:09:43.0" uuid="2b336df7-29e8-4f79-985f-66502739d22f" protectedtitlecache="false" titleCache="Achillea millefolium L. sec. Cyprus" doubtful="false" usenamecache="false" excluded="false" taxonstatusunknown="false" taxonomicchildrencount="0" unplaced="false" createdby_id="11" sec_id="10" publish="true"/>
+ <TaxonBase DTYPE="Taxon" id="41" created="2011-03-01 20:11:26.0" uuid="094e1af8-efd8-4605-b037-b4f715379562" protectedtitlecache="false" titleCache="Achillea santolinoides subsp. wilhelmsii (K. Koch) Greuter sec. Cyprus" doubtful="false" usenamecache="false" excluded="false" taxonstatusunknown="false" taxonomicchildrencount="0" unplaced="false" createdby_id="11" sec_id="10" publish="true"/>
+
+ <PolytomousKey_Taxon polytomousKey_id="1550" taxon_id="35"/>
+
+ <RightsInfo id="10" created="2014-10-09 15:45:53.0" uuid="bdfb572b-be25-45e7-9349-22a9da43531f" updated="2014-10-09 15:48:01.0" text="Rights Text Test" createdby_id="10" updatedby_id="10" agent_id="4809" type_id="2056"/>
+
+ <PolytomousKeyNode id="2750" created="2014-03-10 10:02:35.0" uuid="75e4c924-ff58-4ee7-a59d-fd9173517d08" updated="2014-03-10 10:02:42.0" nodenumber="1" key_id="1550" question_id="2760"/>
+ <PolytomousKeyNode id="2751" created="2014-03-10 10:02:52.0" uuid="23e51ff7-11b1-443b-aff2-3fe8b5ace9fe" sortindex="0" key_id="1550" statement_id="2467" subkey_id="1550" taxon_id="37" parent_id="2750"/>
+ <PolytomousKeyNode id="2752" created="2014-03-10 10:03:16.0" uuid="dcf326f7-c0ad-4e76-b64e-43aea11f767c" key_id="1550"/>
+ <PolytomousKeyNode id="2753" created="2014-03-10 10:03:38.0" uuid="b775c027-13c0-4b87-8aa9-712faeaafbdc" updated="2014-03-10 10:06:32.0" nodenumber="2" sortindex="1" key_id="1550" question_id="2761" statement_id="2460" subkey_id="1550" parent_id="2750"/>
+ <PolytomousKeyNode id="2754" created="2014-03-10 10:03:52.0" uuid="df5d5922-35de-43d5-9d46-7730ae28eeb3" updated="2014-03-10 10:06:32.0" nodenumber="3" sortindex="0" key_id="1550" statement_id="2461" subkey_id="1550" parent_id="2753"/>
+ <PolytomousKeyNode id="2755" created="2014-03-10 10:04:07.0" uuid="0c8583ee-399e-433c-b76b-272c54dbd9f5" updated="2014-03-10 10:06:32.0" sortindex="0" key_id="1550" statement_id="2462" taxon_id="32" parent_id="2754"/>
+ <PolytomousKeyNode id="2756" created="2014-03-10 10:04:34.0" uuid="a10e1e61-82c0-470e-a245-10a927b80c9a" updated="2014-03-10 10:06:32.0" sortindex="1" key_id="1550" statement_id="2463" taxon_id="41" parent_id="2754"/>
+ <PolytomousKeyNode id="2757" created="2014-03-10 10:05:07.0" uuid="19f7a6a2-4c55-49cb-8b92-d68a9fd9074c" updated="2014-03-10 10:06:32.0" nodenumber="4" sortindex="1" key_id="1550" statement_id="2464" parent_id="2753"/>
+ <PolytomousKeyNode id="2758" created="2014-03-10 10:05:20.0" uuid="0a4d86d1-fba5-4088-8dcc-6f0e7268ca5b" updated="2014-03-10 10:06:32.0" sortindex="0" key_id="1550" statement_id="2465" taxon_id="40" parent_id="2757"/>
+ <PolytomousKeyNode id="2759" created="2014-03-10 10:06:03.0" uuid="827c9df4-ac15-4163-95ab-616d51f62803" updated="2014-03-10 10:06:32.0" sortindex="1" key_id="1550" statement_id="2466" taxon_id="36" parent_id="2757"/>
+
+ <Credit id="20" created="2014-10-09 15:45:22.0" uuid="aa412b15-ee6c-4834-b14e-a66969cb398d" updated="2014-10-09 15:48:01.0" text="Credits Text Test" createdby_id="10" updatedby_id="10" language_id="124" agent_id="4809"/>
+
+ <KeyStatement id="2460" created="2014-03-10 10:03:48.0" uuid="66da6df7-784c-4d5a-9378-58b2cf92ba13" updated="2014-03-10 10:06:32.0" />
+ <KeyStatement id="2461" created="2014-03-10 10:04:03.0" uuid="f9cfd498-de47-48fd-b38c-43cf57b63750" updated="2014-03-10 10:06:32.0" />
+ <KeyStatement id="2462" created="2014-03-10 10:04:21.0" uuid="817fb39e-91d4-4d8c-a942-6acab47575d1" updated="2014-03-10 10:06:32.0" />
+ <KeyStatement id="2463" created="2014-03-10 10:04:53.0" uuid="6b571b86-7764-4f27-925c-ae5e2653f7ad" updated="2014-03-10 10:06:32.0" />
+ <KeyStatement id="2464" created="2014-03-10 10:05:16.0" uuid="91bbb534-abdf-4915-9f6f-a0cb41f8cf58" updated="2014-03-10 10:06:32.0" />
+ <KeyStatement id="2465" created="2014-03-10 10:05:34.0" uuid="1991ca31-2630-4917-8db3-eb67cec8f231" updated="2014-03-10 10:06:32.0" />
+ <KeyStatement id="2466" created="2014-03-10 10:06:15.0" uuid="3e1bbc59-b098-4533-ac35-245e1140a0ae" updated="2014-03-10 10:06:32.0" />
+ <KeyStatement id="2467" created="2014-03-10 10:03:24.0" uuid="68fd99f6-64ce-4bb8-a6af-d2cf2c046e2c" updated="2014-03-10 10:06:32.0" />
+ <KeyStatement id="2760" created="2014-10-09 15:42:33.0" uuid="b9702653-f620-4208-bda9-a6fe082004d1" updated="2014-10-09 15:42:44.0" createdby_id="10" updatedby_id="10"/>
+ <KeyStatement id="2761" created="2014-10-09 15:42:55.0" uuid="688a432f-4b57-4c6f-a8f6-0c468a28cb7c" updated="2014-10-09 15:43:03.0" createdby_id="10" updatedby_id="10"/>
+
+ <AgentBase DTYPE="Person" id="4809" created="2010-12-21 15:09:59.0" uuid="945d08f2-eb92-45b6-9252-6275ea6d338b" protectedtitlecache="false" titleCache="R. A. Graham" nomenclaturaltitle="R. A. Graham" createdby_id="11"/>
+
+ <Extension id="10" created="2014-10-09 15:45:41.0" uuid="0d6f35d7-7e76-446a-a017-7e8355ee1b4c" updated="2014-10-09 15:48:01.0" extendedObj_type="eu.etaxonomy.cdm.model.description.PolytomousKey" extendedObj_id="1550" value="http://test.com" createdby_id="10" updatedby_id="10" type_id="2075"/>
+
+ <PolytomousKey_OriginalSourceBase PolytomousKey_id="1550" sources_id="23710"/>
+ <PolytomousKey_OriginalSourceBase PolytomousKey_id="1550" sources_id="23711"/>
+
+ <PolytomousKey_RightsInfo PolytomousKey_id="1550" rights_id="10"/>
+
+ <KeyStatement_LanguageString KeyStatement_id="2460" label_id="13782" label_mapkey_id="124"/>
+ <KeyStatement_LanguageString KeyStatement_id="2461" label_id="13783" label_mapkey_id="124"/>
+ <KeyStatement_LanguageString KeyStatement_id="2462" label_id="13784" label_mapkey_id="124"/>
+ <KeyStatement_LanguageString KeyStatement_id="2463" label_id="13786" label_mapkey_id="124"/>
+ <KeyStatement_LanguageString KeyStatement_id="2464" label_id="13789" label_mapkey_id="124"/>
+ <KeyStatement_LanguageString KeyStatement_id="2465" label_id="13790" label_mapkey_id="124"/>
+ <KeyStatement_LanguageString KeyStatement_id="2466" label_id="13792" label_mapkey_id="124"/>
+ <KeyStatement_LanguageString KeyStatement_id="2467" label_id="13796" label_mapkey_id="124"/>
+ <KeyStatement_LanguageString KeyStatement_id="2760" label_id="14570" label_mapkey_id="124"/>
+ <KeyStatement_LanguageString KeyStatement_id="2761" label_id="14571" label_mapkey_id="124"/>
+
+ <PolytomousKey id="751" created="2013-03-24 11:17:08.0" uuid="9d8bf4f6-a70a-4b80-8556-2ccfb436ff01" protectedtitlecache="true" titleCache="Asphodeline" startNumber="1"/>
+ <PolytomousKey id="1550" created="2014-03-10 10:02:35.0" uuid="0d53ba20-7de4-4baa-bd8a-401048447d66" updated="2014-03-10 10:02:42.0" protectedtitlecache="true" titleCache="Achillea" root_id="2750" startNumber="1"/>
+
+ <OriginalSourceBase DTYPE="IdentifiableSource" id="23710" created="2014-03-10 10:06:57.0" uuid="95e05e82-499d-4b8a-ad6b-1085f74a7496" updated="2014-03-10 10:07:33.0" sourcedObj_type="eu.etaxonomy.cdm.model.description.PolytomousKey" sourcedObj_id="1550" sourceType="PTS"/>
+ <OriginalSourceBase DTYPE="IdentifiableSource" id="23711" created="2014-03-10 10:06:48.0" uuid="f77555fe-0d98-4c9f-98ed-a5bca6b1e342" updated="2014-03-10 10:07:33.0" sourcedObj_type="eu.etaxonomy.cdm.model.description.PolytomousKey" sourcedObj_id="1550" sourceType="PTS"/>
+
+
+</dataset>
--- /dev/null
+06-15 17:37:28 jdbc[2]: java.lang.Exception: Open Stack Trace
+ at org.h2.util.CloseWatcher.register(CloseWatcher.java:99)
+ at org.h2.jdbc.JdbcConnection.<init>(JdbcConnection.java:121)
+ at org.h2.jdbc.JdbcConnection.<init>(JdbcConnection.java:93)
+ at org.h2.Driver.connect(Driver.java:72)
+ at java.sql.DriverManager.getConnection(DriverManager.java:571)
+ at java.sql.DriverManager.getConnection(DriverManager.java:215)
+ at eu.etaxonomy.cdm.database.CdmDataSourceBase.getConnection(CdmDataSourceBase.java:67)
+ at eu.etaxonomy.cdm.database.CdmPersistentDataSource.getConnection(CdmPersistentDataSource.java:51)
+ at eu.etaxonomy.cdm.database.CdmDataSourceBase.getConnection(CdmDataSourceBase.java:45)
+ at eu.etaxonomy.cdm.database.CdmPersistentDataSource.getConnection(CdmPersistentDataSource.java:51)
+ at eu.etaxonomy.cdm.database.CdmDataSourceBase.executeQuery(CdmDataSourceBase.java:182)
+ at eu.etaxonomy.cdm.database.CdmPersistentDataSource.executeQuery(CdmPersistentDataSource.java:51)
+ at eu.etaxonomy.cdm.database.CdmDataSourceBase.getSingleValue(CdmDataSourceBase.java:136)
+ at eu.etaxonomy.cdm.database.CdmPersistentDataSource.getSingleValue(CdmPersistentDataSource.java:51)
+ at eu.etaxonomy.cdm.database.CdmDataSourceBase.getMetaDataMap(CdmDataSourceBase.java:288)
+ at eu.etaxonomy.cdm.database.CdmPersistentDataSource.getMetaDataMap(CdmPersistentDataSource.java:51)
+ at eu.etaxonomy.taxeditor.view.datasource.CdmMetaDataAwareDataSourceContainer.getMetaDataFromDataSource(CdmMetaDataAwareDataSourceContainer.java:84)
+ at eu.etaxonomy.taxeditor.view.datasource.CdmDataSourceViewPart$DataSourceJob.run(CdmDataSourceViewPart.java:140)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+
+org.h2.message.DbException: The connection was not closed by the application and is garbage collected [90018-170]
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.message.DbException.get(DbException.java:135)
+ at org.h2.jdbc.JdbcConnection.closeOld(JdbcConnection.java:175)
+ at org.h2.jdbc.JdbcConnection.<init>(JdbcConnection.java:120)
+ at org.h2.jdbc.JdbcConnection.<init>(JdbcConnection.java:93)
+ at org.h2.Driver.connect(Driver.java:72)
+ at java.sql.DriverManager.getConnection(DriverManager.java:571)
+ at java.sql.DriverManager.getConnection(DriverManager.java:215)
+ at eu.etaxonomy.cdm.database.CdmDataSourceBase.testConnection(CdmDataSourceBase.java:93)
+ at eu.etaxonomy.cdm.database.CdmDataSource.testConnection(CdmDataSource.java:33)
+ at eu.etaxonomy.taxeditor.datasource.wizard.CdmDataSourceCredentialsWizardPage.testDbConfiguration(CdmDataSourceCredentialsWizardPage.java:292)
+ at eu.etaxonomy.taxeditor.datasource.wizard.CdmDataSourceCredentialsWizardPage.testDbConfiguration(CdmDataSourceCredentialsWizardPage.java:281)
+ at eu.etaxonomy.taxeditor.datasource.wizard.CdmDataSourceCredentialsWizardPage$1.widgetSelected(CdmDataSourceCredentialsWizardPage.java:165)
+ at org.eclipse.swt.widgets.TypedListener.handleEvent(TypedListener.java:240)
+ at org.eclipse.swt.widgets.EventTable.sendEvent(EventTable.java:84)
+ at org.eclipse.swt.widgets.Widget.sendEvent(Widget.java:1258)
+ at org.eclipse.swt.widgets.Display.runDeferredEvents(Display.java:3588)
+ at org.eclipse.swt.widgets.Display.readAndDispatch(Display.java:3209)
+ at org.eclipse.jface.window.Window.runEventLoop(Window.java:825)
+ at org.eclipse.jface.window.Window.open(Window.java:801)
+ at eu.etaxonomy.taxeditor.view.datasource.handler.CreateDataSourceHandler.specificExecute(CreateDataSourceHandler.java:41)
+ at eu.etaxonomy.taxeditor.view.datasource.handler.AbstractDataSourceHandler.execute(AbstractDataSourceHandler.java:37)
+ at eu.etaxonomy.taxeditor.view.datasource.handler.CreateDataSourceHandler.execute(CreateDataSourceHandler.java:1)
+ at org.eclipse.ui.internal.handlers.HandlerProxy.execute(HandlerProxy.java:293)
+ at org.eclipse.core.commands.Command.executeWithChecks(Command.java:476)
+ at org.eclipse.core.commands.ParameterizedCommand.executeWithChecks(ParameterizedCommand.java:508)
+ at org.eclipse.ui.internal.handlers.HandlerService.executeCommand(HandlerService.java:169)
+ at org.eclipse.ui.internal.handlers.SlaveHandlerService.executeCommand(SlaveHandlerService.java:241)
+ at org.eclipse.ui.internal.handlers.SlaveHandlerService.executeCommand(SlaveHandlerService.java:241)
+ at org.eclipse.ui.menus.CommandContributionItem.handleWidgetSelection(CommandContributionItem.java:829)
+ at org.eclipse.ui.menus.CommandContributionItem.access$19(CommandContributionItem.java:815)
+ at org.eclipse.ui.menus.CommandContributionItem$5.handleEvent(CommandContributionItem.java:805)
+ at org.eclipse.swt.widgets.EventTable.sendEvent(EventTable.java:84)
+ at org.eclipse.swt.widgets.Widget.sendEvent(Widget.java:1258)
+ at org.eclipse.swt.widgets.Display.runDeferredEvents(Display.java:3588)
+ at org.eclipse.swt.widgets.Display.readAndDispatch(Display.java:3209)
+ at org.eclipse.ui.internal.Workbench.runEventLoop(Workbench.java:2701)
+ at org.eclipse.ui.internal.Workbench.runUI(Workbench.java:2665)
+ at org.eclipse.ui.internal.Workbench.access$4(Workbench.java:2499)
+ at org.eclipse.ui.internal.Workbench$7.run(Workbench.java:679)
+ at org.eclipse.core.databinding.observable.Realm.runWithDefault(Realm.java:332)
+ at org.eclipse.ui.internal.Workbench.createAndRunWorkbench(Workbench.java:668)
+ at org.eclipse.ui.PlatformUI.createAndRunWorkbench(PlatformUI.java:149)
+ at eu.etaxonomy.taxeditor.Application.start(Application.java:24)
+ at org.eclipse.equinox.internal.app.EclipseAppHandle.run(EclipseAppHandle.java:196)
+ at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.runApplication(EclipseAppLauncher.java:110)
+ at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.start(EclipseAppLauncher.java:79)
+ at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:344)
+ at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:179)
+ at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
+ at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
+ at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
+ at java.lang.reflect.Method.invoke(Method.java:606)
+ at org.eclipse.equinox.launcher.Main.invokeFramework(Main.java:622)
+ at org.eclipse.equinox.launcher.Main.basicRun(Main.java:577)
+ at org.eclipse.equinox.launcher.Main.run(Main.java:1410)
+ at org.eclipse.equinox.launcher.Main.main(Main.java:1386)
+Caused by: org.h2.jdbc.JdbcSQLException: The connection was not closed by the application and is garbage collected [90018-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ ... 58 more
+06-15 17:37:28 jdbc[2]: java.lang.Exception: Open Stack Trace
+ at org.h2.util.CloseWatcher.register(CloseWatcher.java:99)
+ at org.h2.jdbc.JdbcConnection.<init>(JdbcConnection.java:121)
+ at org.h2.jdbc.JdbcConnection.<init>(JdbcConnection.java:93)
+ at org.h2.Driver.connect(Driver.java:72)
+ at java.sql.DriverManager.getConnection(DriverManager.java:571)
+ at java.sql.DriverManager.getConnection(DriverManager.java:215)
+ at eu.etaxonomy.cdm.database.CdmDataSourceBase.getConnection(CdmDataSourceBase.java:67)
+ at eu.etaxonomy.cdm.database.CdmPersistentDataSource.getConnection(CdmPersistentDataSource.java:51)
+ at eu.etaxonomy.cdm.database.CdmDataSourceBase.getConnection(CdmDataSourceBase.java:45)
+ at eu.etaxonomy.cdm.database.CdmPersistentDataSource.getConnection(CdmPersistentDataSource.java:51)
+ at eu.etaxonomy.cdm.database.CdmDataSourceBase.executeQuery(CdmDataSourceBase.java:182)
+ at eu.etaxonomy.cdm.database.CdmPersistentDataSource.executeQuery(CdmPersistentDataSource.java:51)
+ at eu.etaxonomy.cdm.database.CdmDataSourceBase.getSingleValue(CdmDataSourceBase.java:136)
+ at eu.etaxonomy.cdm.database.CdmPersistentDataSource.getSingleValue(CdmPersistentDataSource.java:51)
+ at eu.etaxonomy.cdm.database.CdmDataSourceBase.getMetaDataMap(CdmDataSourceBase.java:288)
+ at eu.etaxonomy.cdm.database.CdmPersistentDataSource.getMetaDataMap(CdmPersistentDataSource.java:51)
+ at eu.etaxonomy.taxeditor.view.datasource.CdmMetaDataAwareDataSourceContainer.getMetaDataFromDataSource(CdmMetaDataAwareDataSourceContainer.java:84)
+ at eu.etaxonomy.taxeditor.view.datasource.CdmDataSourceViewPart$DataSourceJob.run(CdmDataSourceViewPart.java:140)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+
+org.h2.message.DbException: The connection was not closed by the application and is garbage collected [90018-170]
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.message.DbException.get(DbException.java:135)
+ at org.h2.jdbc.JdbcConnection.closeOld(JdbcConnection.java:175)
+ at org.h2.jdbc.JdbcConnection.<init>(JdbcConnection.java:120)
+ at org.h2.jdbc.JdbcConnection.<init>(JdbcConnection.java:93)
+ at org.h2.Driver.connect(Driver.java:72)
+ at java.sql.DriverManager.getConnection(DriverManager.java:571)
+ at java.sql.DriverManager.getConnection(DriverManager.java:215)
+ at eu.etaxonomy.cdm.database.CdmDataSourceBase.testConnection(CdmDataSourceBase.java:93)
+ at eu.etaxonomy.cdm.database.CdmDataSource.testConnection(CdmDataSource.java:33)
+ at eu.etaxonomy.taxeditor.datasource.wizard.CdmDataSourceCredentialsWizardPage.testDbConfiguration(CdmDataSourceCredentialsWizardPage.java:292)
+ at eu.etaxonomy.taxeditor.datasource.wizard.CdmDataSourceCredentialsWizardPage.testDbConfiguration(CdmDataSourceCredentialsWizardPage.java:281)
+ at eu.etaxonomy.taxeditor.datasource.wizard.CdmDataSourceCredentialsWizardPage$1.widgetSelected(CdmDataSourceCredentialsWizardPage.java:165)
+ at org.eclipse.swt.widgets.TypedListener.handleEvent(TypedListener.java:240)
+ at org.eclipse.swt.widgets.EventTable.sendEvent(EventTable.java:84)
+ at org.eclipse.swt.widgets.Widget.sendEvent(Widget.java:1258)
+ at org.eclipse.swt.widgets.Display.runDeferredEvents(Display.java:3588)
+ at org.eclipse.swt.widgets.Display.readAndDispatch(Display.java:3209)
+ at org.eclipse.jface.window.Window.runEventLoop(Window.java:825)
+ at org.eclipse.jface.window.Window.open(Window.java:801)
+ at eu.etaxonomy.taxeditor.view.datasource.handler.CreateDataSourceHandler.specificExecute(CreateDataSourceHandler.java:41)
+ at eu.etaxonomy.taxeditor.view.datasource.handler.AbstractDataSourceHandler.execute(AbstractDataSourceHandler.java:37)
+ at eu.etaxonomy.taxeditor.view.datasource.handler.CreateDataSourceHandler.execute(CreateDataSourceHandler.java:1)
+ at org.eclipse.ui.internal.handlers.HandlerProxy.execute(HandlerProxy.java:293)
+ at org.eclipse.core.commands.Command.executeWithChecks(Command.java:476)
+ at org.eclipse.core.commands.ParameterizedCommand.executeWithChecks(ParameterizedCommand.java:508)
+ at org.eclipse.ui.internal.handlers.HandlerService.executeCommand(HandlerService.java:169)
+ at org.eclipse.ui.internal.handlers.SlaveHandlerService.executeCommand(SlaveHandlerService.java:241)
+ at org.eclipse.ui.internal.handlers.SlaveHandlerService.executeCommand(SlaveHandlerService.java:241)
+ at org.eclipse.ui.menus.CommandContributionItem.handleWidgetSelection(CommandContributionItem.java:829)
+ at org.eclipse.ui.menus.CommandContributionItem.access$19(CommandContributionItem.java:815)
+ at org.eclipse.ui.menus.CommandContributionItem$5.handleEvent(CommandContributionItem.java:805)
+ at org.eclipse.swt.widgets.EventTable.sendEvent(EventTable.java:84)
+ at org.eclipse.swt.widgets.Widget.sendEvent(Widget.java:1258)
+ at org.eclipse.swt.widgets.Display.runDeferredEvents(Display.java:3588)
+ at org.eclipse.swt.widgets.Display.readAndDispatch(Display.java:3209)
+ at org.eclipse.ui.internal.Workbench.runEventLoop(Workbench.java:2701)
+ at org.eclipse.ui.internal.Workbench.runUI(Workbench.java:2665)
+ at org.eclipse.ui.internal.Workbench.access$4(Workbench.java:2499)
+ at org.eclipse.ui.internal.Workbench$7.run(Workbench.java:679)
+ at org.eclipse.core.databinding.observable.Realm.runWithDefault(Realm.java:332)
+ at org.eclipse.ui.internal.Workbench.createAndRunWorkbench(Workbench.java:668)
+ at org.eclipse.ui.PlatformUI.createAndRunWorkbench(PlatformUI.java:149)
+ at eu.etaxonomy.taxeditor.Application.start(Application.java:24)
+ at org.eclipse.equinox.internal.app.EclipseAppHandle.run(EclipseAppHandle.java:196)
+ at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.runApplication(EclipseAppLauncher.java:110)
+ at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.start(EclipseAppLauncher.java:79)
+ at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:344)
+ at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:179)
+ at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
+ at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
+ at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
+ at java.lang.reflect.Method.invoke(Method.java:606)
+ at org.eclipse.equinox.launcher.Main.invokeFramework(Main.java:622)
+ at org.eclipse.equinox.launcher.Main.basicRun(Main.java:577)
+ at org.eclipse.equinox.launcher.Main.run(Main.java:1410)
+ at org.eclipse.equinox.launcher.Main.main(Main.java:1386)
+Caused by: org.h2.jdbc.JdbcSQLException: The connection was not closed by the application and is garbage collected [90018-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ ... 58 more
+06-15 17:37:28 jdbc[2]: java.lang.Exception: Open Stack Trace
+ at org.h2.util.CloseWatcher.register(CloseWatcher.java:99)
+ at org.h2.jdbc.JdbcConnection.<init>(JdbcConnection.java:121)
+ at org.h2.jdbc.JdbcConnection.<init>(JdbcConnection.java:93)
+ at org.h2.Driver.connect(Driver.java:72)
+ at java.sql.DriverManager.getConnection(DriverManager.java:571)
+ at java.sql.DriverManager.getConnection(DriverManager.java:215)
+ at eu.etaxonomy.cdm.database.CdmDataSourceBase.getConnection(CdmDataSourceBase.java:67)
+ at eu.etaxonomy.cdm.database.CdmPersistentDataSource.getConnection(CdmPersistentDataSource.java:51)
+ at eu.etaxonomy.cdm.database.CdmDataSourceBase.getConnection(CdmDataSourceBase.java:45)
+ at eu.etaxonomy.cdm.database.CdmPersistentDataSource.getConnection(CdmPersistentDataSource.java:51)
+ at eu.etaxonomy.cdm.database.CdmDataSourceBase.executeQuery(CdmDataSourceBase.java:182)
+ at eu.etaxonomy.cdm.database.CdmPersistentDataSource.executeQuery(CdmPersistentDataSource.java:51)
+ at eu.etaxonomy.cdm.database.CdmDataSourceBase.getSingleValue(CdmDataSourceBase.java:136)
+ at eu.etaxonomy.cdm.database.CdmPersistentDataSource.getSingleValue(CdmPersistentDataSource.java:51)
+ at eu.etaxonomy.cdm.database.CdmDataSourceBase.getMetaDataMap(CdmDataSourceBase.java:288)
+ at eu.etaxonomy.cdm.database.CdmPersistentDataSource.getMetaDataMap(CdmPersistentDataSource.java:51)
+ at eu.etaxonomy.taxeditor.view.datasource.CdmMetaDataAwareDataSourceContainer.getMetaDataFromDataSource(CdmMetaDataAwareDataSourceContainer.java:84)
+ at eu.etaxonomy.taxeditor.view.datasource.CdmDataSourceViewPart$DataSourceJob.run(CdmDataSourceViewPart.java:140)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+
+org.h2.message.DbException: The connection was not closed by the application and is garbage collected [90018-170]
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.message.DbException.get(DbException.java:135)
+ at org.h2.jdbc.JdbcConnection.closeOld(JdbcConnection.java:175)
+ at org.h2.jdbc.JdbcConnection.<init>(JdbcConnection.java:120)
+ at org.h2.jdbc.JdbcConnection.<init>(JdbcConnection.java:93)
+ at org.h2.Driver.connect(Driver.java:72)
+ at java.sql.DriverManager.getConnection(DriverManager.java:571)
+ at java.sql.DriverManager.getConnection(DriverManager.java:215)
+ at eu.etaxonomy.cdm.database.CdmDataSourceBase.testConnection(CdmDataSourceBase.java:93)
+ at eu.etaxonomy.cdm.database.CdmDataSource.testConnection(CdmDataSource.java:33)
+ at eu.etaxonomy.taxeditor.datasource.wizard.CdmDataSourceCredentialsWizardPage.testDbConfiguration(CdmDataSourceCredentialsWizardPage.java:292)
+ at eu.etaxonomy.taxeditor.datasource.wizard.CdmDataSourceCredentialsWizardPage.testDbConfiguration(CdmDataSourceCredentialsWizardPage.java:281)
+ at eu.etaxonomy.taxeditor.datasource.wizard.CdmDataSourceCredentialsWizardPage$1.widgetSelected(CdmDataSourceCredentialsWizardPage.java:165)
+ at org.eclipse.swt.widgets.TypedListener.handleEvent(TypedListener.java:240)
+ at org.eclipse.swt.widgets.EventTable.sendEvent(EventTable.java:84)
+ at org.eclipse.swt.widgets.Widget.sendEvent(Widget.java:1258)
+ at org.eclipse.swt.widgets.Display.runDeferredEvents(Display.java:3588)
+ at org.eclipse.swt.widgets.Display.readAndDispatch(Display.java:3209)
+ at org.eclipse.jface.window.Window.runEventLoop(Window.java:825)
+ at org.eclipse.jface.window.Window.open(Window.java:801)
+ at eu.etaxonomy.taxeditor.view.datasource.handler.CreateDataSourceHandler.specificExecute(CreateDataSourceHandler.java:41)
+ at eu.etaxonomy.taxeditor.view.datasource.handler.AbstractDataSourceHandler.execute(AbstractDataSourceHandler.java:37)
+ at eu.etaxonomy.taxeditor.view.datasource.handler.CreateDataSourceHandler.execute(CreateDataSourceHandler.java:1)
+ at org.eclipse.ui.internal.handlers.HandlerProxy.execute(HandlerProxy.java:293)
+ at org.eclipse.core.commands.Command.executeWithChecks(Command.java:476)
+ at org.eclipse.core.commands.ParameterizedCommand.executeWithChecks(ParameterizedCommand.java:508)
+ at org.eclipse.ui.internal.handlers.HandlerService.executeCommand(HandlerService.java:169)
+ at org.eclipse.ui.internal.handlers.SlaveHandlerService.executeCommand(SlaveHandlerService.java:241)
+ at org.eclipse.ui.internal.handlers.SlaveHandlerService.executeCommand(SlaveHandlerService.java:241)
+ at org.eclipse.ui.menus.CommandContributionItem.handleWidgetSelection(CommandContributionItem.java:829)
+ at org.eclipse.ui.menus.CommandContributionItem.access$19(CommandContributionItem.java:815)
+ at org.eclipse.ui.menus.CommandContributionItem$5.handleEvent(CommandContributionItem.java:805)
+ at org.eclipse.swt.widgets.EventTable.sendEvent(EventTable.java:84)
+ at org.eclipse.swt.widgets.Widget.sendEvent(Widget.java:1258)
+ at org.eclipse.swt.widgets.Display.runDeferredEvents(Display.java:3588)
+ at org.eclipse.swt.widgets.Display.readAndDispatch(Display.java:3209)
+ at org.eclipse.ui.internal.Workbench.runEventLoop(Workbench.java:2701)
+ at org.eclipse.ui.internal.Workbench.runUI(Workbench.java:2665)
+ at org.eclipse.ui.internal.Workbench.access$4(Workbench.java:2499)
+ at org.eclipse.ui.internal.Workbench$7.run(Workbench.java:679)
+ at org.eclipse.core.databinding.observable.Realm.runWithDefault(Realm.java:332)
+ at org.eclipse.ui.internal.Workbench.createAndRunWorkbench(Workbench.java:668)
+ at org.eclipse.ui.PlatformUI.createAndRunWorkbench(PlatformUI.java:149)
+ at eu.etaxonomy.taxeditor.Application.start(Application.java:24)
+ at org.eclipse.equinox.internal.app.EclipseAppHandle.run(EclipseAppHandle.java:196)
+ at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.runApplication(EclipseAppLauncher.java:110)
+ at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.start(EclipseAppLauncher.java:79)
+ at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:344)
+ at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:179)
+ at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
+ at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
+ at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
+ at java.lang.reflect.Method.invoke(Method.java:606)
+ at org.eclipse.equinox.launcher.Main.invokeFramework(Main.java:622)
+ at org.eclipse.equinox.launcher.Main.basicRun(Main.java:577)
+ at org.eclipse.equinox.launcher.Main.run(Main.java:1410)
+ at org.eclipse.equinox.launcher.Main.main(Main.java:1386)
+Caused by: org.h2.jdbc.JdbcSQLException: The connection was not closed by the application and is garbage collected [90018-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ ... 58 more
+06-15 17:37:28 jdbc[2]: java.lang.Exception: Open Stack Trace
+ at org.h2.util.CloseWatcher.register(CloseWatcher.java:99)
+ at org.h2.jdbc.JdbcConnection.<init>(JdbcConnection.java:121)
+ at org.h2.jdbc.JdbcConnection.<init>(JdbcConnection.java:93)
+ at org.h2.Driver.connect(Driver.java:72)
+ at java.sql.DriverManager.getConnection(DriverManager.java:571)
+ at java.sql.DriverManager.getConnection(DriverManager.java:215)
+ at eu.etaxonomy.cdm.database.CdmDataSourceBase.testConnection(CdmDataSourceBase.java:93)
+ at eu.etaxonomy.cdm.database.CdmPersistentDataSource.testConnection(CdmPersistentDataSource.java:51)
+ at eu.etaxonomy.cdm.database.CdmDataSourceBase.checkConnection(CdmDataSourceBase.java:110)
+ at eu.etaxonomy.cdm.database.CdmPersistentDataSource.checkConnection(CdmPersistentDataSource.java:51)
+ at eu.etaxonomy.taxeditor.view.datasource.CdmMetaDataAwareDataSourceContainer.getMetaDataFromDataSource(CdmMetaDataAwareDataSourceContainer.java:72)
+ at eu.etaxonomy.taxeditor.view.datasource.CdmDataSourceViewPart$DataSourceJob.run(CdmDataSourceViewPart.java:140)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+
+org.h2.message.DbException: The connection was not closed by the application and is garbage collected [90018-170]
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.message.DbException.get(DbException.java:135)
+ at org.h2.jdbc.JdbcConnection.closeOld(JdbcConnection.java:175)
+ at org.h2.jdbc.JdbcConnection.<init>(JdbcConnection.java:120)
+ at org.h2.jdbc.JdbcConnection.<init>(JdbcConnection.java:93)
+ at org.h2.Driver.connect(Driver.java:72)
+ at java.sql.DriverManager.getConnection(DriverManager.java:571)
+ at java.sql.DriverManager.getConnection(DriverManager.java:215)
+ at eu.etaxonomy.cdm.database.CdmDataSourceBase.testConnection(CdmDataSourceBase.java:93)
+ at eu.etaxonomy.cdm.database.CdmDataSource.testConnection(CdmDataSource.java:33)
+ at eu.etaxonomy.taxeditor.datasource.wizard.CdmDataSourceCredentialsWizardPage.testDbConfiguration(CdmDataSourceCredentialsWizardPage.java:292)
+ at eu.etaxonomy.taxeditor.datasource.wizard.CdmDataSourceCredentialsWizardPage.testDbConfiguration(CdmDataSourceCredentialsWizardPage.java:281)
+ at eu.etaxonomy.taxeditor.datasource.wizard.CdmDataSourceCredentialsWizardPage$1.widgetSelected(CdmDataSourceCredentialsWizardPage.java:165)
+ at org.eclipse.swt.widgets.TypedListener.handleEvent(TypedListener.java:240)
+ at org.eclipse.swt.widgets.EventTable.sendEvent(EventTable.java:84)
+ at org.eclipse.swt.widgets.Widget.sendEvent(Widget.java:1258)
+ at org.eclipse.swt.widgets.Display.runDeferredEvents(Display.java:3588)
+ at org.eclipse.swt.widgets.Display.readAndDispatch(Display.java:3209)
+ at org.eclipse.jface.window.Window.runEventLoop(Window.java:825)
+ at org.eclipse.jface.window.Window.open(Window.java:801)
+ at eu.etaxonomy.taxeditor.view.datasource.handler.CreateDataSourceHandler.specificExecute(CreateDataSourceHandler.java:41)
+ at eu.etaxonomy.taxeditor.view.datasource.handler.AbstractDataSourceHandler.execute(AbstractDataSourceHandler.java:37)
+ at eu.etaxonomy.taxeditor.view.datasource.handler.CreateDataSourceHandler.execute(CreateDataSourceHandler.java:1)
+ at org.eclipse.ui.internal.handlers.HandlerProxy.execute(HandlerProxy.java:293)
+ at org.eclipse.core.commands.Command.executeWithChecks(Command.java:476)
+ at org.eclipse.core.commands.ParameterizedCommand.executeWithChecks(ParameterizedCommand.java:508)
+ at org.eclipse.ui.internal.handlers.HandlerService.executeCommand(HandlerService.java:169)
+ at org.eclipse.ui.internal.handlers.SlaveHandlerService.executeCommand(SlaveHandlerService.java:241)
+ at org.eclipse.ui.internal.handlers.SlaveHandlerService.executeCommand(SlaveHandlerService.java:241)
+ at org.eclipse.ui.menus.CommandContributionItem.handleWidgetSelection(CommandContributionItem.java:829)
+ at org.eclipse.ui.menus.CommandContributionItem.access$19(CommandContributionItem.java:815)
+ at org.eclipse.ui.menus.CommandContributionItem$5.handleEvent(CommandContributionItem.java:805)
+ at org.eclipse.swt.widgets.EventTable.sendEvent(EventTable.java:84)
+ at org.eclipse.swt.widgets.Widget.sendEvent(Widget.java:1258)
+ at org.eclipse.swt.widgets.Display.runDeferredEvents(Display.java:3588)
+ at org.eclipse.swt.widgets.Display.readAndDispatch(Display.java:3209)
+ at org.eclipse.ui.internal.Workbench.runEventLoop(Workbench.java:2701)
+ at org.eclipse.ui.internal.Workbench.runUI(Workbench.java:2665)
+ at org.eclipse.ui.internal.Workbench.access$4(Workbench.java:2499)
+ at org.eclipse.ui.internal.Workbench$7.run(Workbench.java:679)
+ at org.eclipse.core.databinding.observable.Realm.runWithDefault(Realm.java:332)
+ at org.eclipse.ui.internal.Workbench.createAndRunWorkbench(Workbench.java:668)
+ at org.eclipse.ui.PlatformUI.createAndRunWorkbench(PlatformUI.java:149)
+ at eu.etaxonomy.taxeditor.Application.start(Application.java:24)
+ at org.eclipse.equinox.internal.app.EclipseAppHandle.run(EclipseAppHandle.java:196)
+ at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.runApplication(EclipseAppLauncher.java:110)
+ at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.start(EclipseAppLauncher.java:79)
+ at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:344)
+ at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:179)
+ at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
+ at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
+ at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
+ at java.lang.reflect.Method.invoke(Method.java:606)
+ at org.eclipse.equinox.launcher.Main.invokeFramework(Main.java:622)
+ at org.eclipse.equinox.launcher.Main.basicRun(Main.java:577)
+ at org.eclipse.equinox.launcher.Main.run(Main.java:1410)
+ at org.eclipse.equinox.launcher.Main.main(Main.java:1386)
+Caused by: org.h2.jdbc.JdbcSQLException: The connection was not closed by the application and is garbage collected [90018-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ ... 58 more
+06-15 17:37:28 jdbc[2]: java.lang.Exception: Open Stack Trace
+ at org.h2.util.CloseWatcher.register(CloseWatcher.java:99)
+ at org.h2.jdbc.JdbcConnection.<init>(JdbcConnection.java:121)
+ at org.h2.jdbc.JdbcConnection.<init>(JdbcConnection.java:93)
+ at org.h2.Driver.connect(Driver.java:72)
+ at java.sql.DriverManager.getConnection(DriverManager.java:571)
+ at java.sql.DriverManager.getConnection(DriverManager.java:215)
+ at eu.etaxonomy.cdm.database.CdmDataSourceBase.getConnection(CdmDataSourceBase.java:67)
+ at eu.etaxonomy.cdm.database.CdmPersistentDataSource.getConnection(CdmPersistentDataSource.java:51)
+ at eu.etaxonomy.cdm.database.CdmDataSourceBase.getConnection(CdmDataSourceBase.java:45)
+ at eu.etaxonomy.cdm.database.CdmPersistentDataSource.getConnection(CdmPersistentDataSource.java:51)
+ at eu.etaxonomy.cdm.database.CdmDataSourceBase.executeQuery(CdmDataSourceBase.java:182)
+ at eu.etaxonomy.cdm.database.CdmPersistentDataSource.executeQuery(CdmPersistentDataSource.java:51)
+ at eu.etaxonomy.cdm.database.CdmDataSourceBase.getSingleValue(CdmDataSourceBase.java:136)
+ at eu.etaxonomy.cdm.database.CdmPersistentDataSource.getSingleValue(CdmPersistentDataSource.java:51)
+ at eu.etaxonomy.cdm.database.CdmDataSourceBase.getMetaDataMap(CdmDataSourceBase.java:288)
+ at eu.etaxonomy.cdm.database.CdmPersistentDataSource.getMetaDataMap(CdmPersistentDataSource.java:51)
+ at eu.etaxonomy.taxeditor.view.datasource.CdmMetaDataAwareDataSourceContainer.getMetaDataFromDataSource(CdmMetaDataAwareDataSourceContainer.java:84)
+ at eu.etaxonomy.taxeditor.view.datasource.CdmDataSourceViewPart$DataSourceJob.run(CdmDataSourceViewPart.java:140)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+
+org.h2.message.DbException: The connection was not closed by the application and is garbage collected [90018-170]
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.message.DbException.get(DbException.java:135)
+ at org.h2.jdbc.JdbcConnection.closeOld(JdbcConnection.java:175)
+ at org.h2.jdbc.JdbcConnection.<init>(JdbcConnection.java:120)
+ at org.h2.jdbc.JdbcConnection.<init>(JdbcConnection.java:93)
+ at org.h2.Driver.connect(Driver.java:72)
+ at java.sql.DriverManager.getConnection(DriverManager.java:571)
+ at java.sql.DriverManager.getConnection(DriverManager.java:215)
+ at eu.etaxonomy.cdm.database.CdmDataSourceBase.testConnection(CdmDataSourceBase.java:93)
+ at eu.etaxonomy.cdm.database.CdmDataSource.testConnection(CdmDataSource.java:33)
+ at eu.etaxonomy.taxeditor.datasource.wizard.CdmDataSourceCredentialsWizardPage.testDbConfiguration(CdmDataSourceCredentialsWizardPage.java:292)
+ at eu.etaxonomy.taxeditor.datasource.wizard.CdmDataSourceCredentialsWizardPage.testDbConfiguration(CdmDataSourceCredentialsWizardPage.java:281)
+ at eu.etaxonomy.taxeditor.datasource.wizard.CdmDataSourceCredentialsWizardPage$1.widgetSelected(CdmDataSourceCredentialsWizardPage.java:165)
+ at org.eclipse.swt.widgets.TypedListener.handleEvent(TypedListener.java:240)
+ at org.eclipse.swt.widgets.EventTable.sendEvent(EventTable.java:84)
+ at org.eclipse.swt.widgets.Widget.sendEvent(Widget.java:1258)
+ at org.eclipse.swt.widgets.Display.runDeferredEvents(Display.java:3588)
+ at org.eclipse.swt.widgets.Display.readAndDispatch(Display.java:3209)
+ at org.eclipse.jface.window.Window.runEventLoop(Window.java:825)
+ at org.eclipse.jface.window.Window.open(Window.java:801)
+ at eu.etaxonomy.taxeditor.view.datasource.handler.CreateDataSourceHandler.specificExecute(CreateDataSourceHandler.java:41)
+ at eu.etaxonomy.taxeditor.view.datasource.handler.AbstractDataSourceHandler.execute(AbstractDataSourceHandler.java:37)
+ at eu.etaxonomy.taxeditor.view.datasource.handler.CreateDataSourceHandler.execute(CreateDataSourceHandler.java:1)
+ at org.eclipse.ui.internal.handlers.HandlerProxy.execute(HandlerProxy.java:293)
+ at org.eclipse.core.commands.Command.executeWithChecks(Command.java:476)
+ at org.eclipse.core.commands.ParameterizedCommand.executeWithChecks(ParameterizedCommand.java:508)
+ at org.eclipse.ui.internal.handlers.HandlerService.executeCommand(HandlerService.java:169)
+ at org.eclipse.ui.internal.handlers.SlaveHandlerService.executeCommand(SlaveHandlerService.java:241)
+ at org.eclipse.ui.internal.handlers.SlaveHandlerService.executeCommand(SlaveHandlerService.java:241)
+ at org.eclipse.ui.menus.CommandContributionItem.handleWidgetSelection(CommandContributionItem.java:829)
+ at org.eclipse.ui.menus.CommandContributionItem.access$19(CommandContributionItem.java:815)
+ at org.eclipse.ui.menus.CommandContributionItem$5.handleEvent(CommandContributionItem.java:805)
+ at org.eclipse.swt.widgets.EventTable.sendEvent(EventTable.java:84)
+ at org.eclipse.swt.widgets.Widget.sendEvent(Widget.java:1258)
+ at org.eclipse.swt.widgets.Display.runDeferredEvents(Display.java:3588)
+ at org.eclipse.swt.widgets.Display.readAndDispatch(Display.java:3209)
+ at org.eclipse.ui.internal.Workbench.runEventLoop(Workbench.java:2701)
+ at org.eclipse.ui.internal.Workbench.runUI(Workbench.java:2665)
+ at org.eclipse.ui.internal.Workbench.access$4(Workbench.java:2499)
+ at org.eclipse.ui.internal.Workbench$7.run(Workbench.java:679)
+ at org.eclipse.core.databinding.observable.Realm.runWithDefault(Realm.java:332)
+ at org.eclipse.ui.internal.Workbench.createAndRunWorkbench(Workbench.java:668)
+ at org.eclipse.ui.PlatformUI.createAndRunWorkbench(PlatformUI.java:149)
+ at eu.etaxonomy.taxeditor.Application.start(Application.java:24)
+ at org.eclipse.equinox.internal.app.EclipseAppHandle.run(EclipseAppHandle.java:196)
+ at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.runApplication(EclipseAppLauncher.java:110)
+ at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.start(EclipseAppLauncher.java:79)
+ at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:344)
+ at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:179)
+ at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
+ at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
+ at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
+ at java.lang.reflect.Method.invoke(Method.java:606)
+ at org.eclipse.equinox.launcher.Main.invokeFramework(Main.java:622)
+ at org.eclipse.equinox.launcher.Main.basicRun(Main.java:577)
+ at org.eclipse.equinox.launcher.Main.run(Main.java:1410)
+ at org.eclipse.equinox.launcher.Main.main(Main.java:1386)
+Caused by: org.h2.jdbc.JdbcSQLException: The connection was not closed by the application and is garbage collected [90018-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ ... 58 more
+06-15 17:37:31 jdbc[3]: exception
+org.h2.jdbc.JdbcSQLException: Table "CDMMETADATA" not found; SQL statement:
+SELECT value FROM CdmMetaData WHERE propertyname=0 [42102-170]
+06-15 17:37:34 jdbc[6]: exception
+org.h2.jdbc.JdbcSQLException: Table "CDMMETADATA" not found; SQL statement:
+SELECT value FROM CdmMetaData WHERE propertyname=0 [42102-170]
+06-15 17:38:06 jdbc[7]: java.lang.Exception: Open Stack Trace
+ at org.h2.util.CloseWatcher.register(CloseWatcher.java:99)
+ at org.h2.jdbc.JdbcConnection.<init>(JdbcConnection.java:121)
+ at org.h2.jdbc.JdbcConnection.<init>(JdbcConnection.java:93)
+ at org.h2.Driver.connect(Driver.java:72)
+ at java.sql.DriverManager.getConnection(DriverManager.java:571)
+ at java.sql.DriverManager.getConnection(DriverManager.java:215)
+ at eu.etaxonomy.cdm.database.CdmDataSourceBase.testConnection(CdmDataSourceBase.java:93)
+ at eu.etaxonomy.cdm.database.CdmPersistentDataSource.testConnection(CdmPersistentDataSource.java:51)
+ at eu.etaxonomy.cdm.database.CdmDataSourceBase.checkConnection(CdmDataSourceBase.java:110)
+ at eu.etaxonomy.cdm.database.CdmPersistentDataSource.checkConnection(CdmPersistentDataSource.java:51)
+ at eu.etaxonomy.taxeditor.view.datasource.CdmMetaDataAwareDataSourceContainer.getMetaDataFromDataSource(CdmMetaDataAwareDataSourceContainer.java:72)
+ at eu.etaxonomy.taxeditor.view.datasource.CdmDataSourceViewPart$DataSourceJob.run(CdmDataSourceViewPart.java:140)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+
+org.h2.message.DbException: The connection was not closed by the application and is garbage collected [90018-170]
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.message.DbException.get(DbException.java:135)
+ at org.h2.jdbc.JdbcConnection.closeOld(JdbcConnection.java:175)
+ at org.h2.jdbc.JdbcConnection.<init>(JdbcConnection.java:120)
+ at org.h2.jdbc.JdbcConnection.<init>(JdbcConnection.java:93)
+ at org.h2.Driver.connect(Driver.java:72)
+ at org.apache.commons.dbcp.DriverConnectionFactory.createConnection(DriverConnectionFactory.java:38)
+ at org.apache.commons.dbcp.PoolableConnectionFactory.makeObject(PoolableConnectionFactory.java:582)
+ at org.apache.commons.dbcp.BasicDataSource.validateConnectionFactory(BasicDataSource.java:1556)
+ at org.apache.commons.dbcp.BasicDataSource.createPoolableConnectionFactory(BasicDataSource.java:1545)
+ at org.apache.commons.dbcp.BasicDataSource.createDataSource(BasicDataSource.java:1388)
+ at eu.etaxonomy.cdm.database.LocalH2.createDataSource(LocalH2.java:88)
+ at org.apache.commons.dbcp.BasicDataSource.getConnection(BasicDataSource.java:1044)
+ at org.hibernate.service.jdbc.connections.internal.DatasourceConnectionProviderImpl.getConnection(DatasourceConnectionProviderImpl.java:141)
+ at org.hibernate.engine.jdbc.internal.JdbcServicesImpl$ConnectionProviderJdbcConnectionAccess.obtainConnection(JdbcServicesImpl.java:242)
+ at org.hibernate.engine.jdbc.internal.JdbcServicesImpl.configure(JdbcServicesImpl.java:117)
+ at org.hibernate.service.internal.StandardServiceRegistryImpl.configureService(StandardServiceRegistryImpl.java:75)
+ at org.hibernate.service.internal.AbstractServiceRegistryImpl.initializeService(AbstractServiceRegistryImpl.java:159)
+ at org.hibernate.service.internal.AbstractServiceRegistryImpl.getService(AbstractServiceRegistryImpl.java:131)
+ at org.hibernate.cfg.SettingsFactory.buildSettings(SettingsFactory.java:77)
+ at org.hibernate.cfg.Configuration.buildSettingsInternal(Configuration.java:2276)
+ at org.hibernate.cfg.Configuration.buildSettings(Configuration.java:2272)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1741)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1781)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBuilder.buildSessionFactory(LocalSessionFactoryBuilder.java:247)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.buildSessionFactory(LocalSessionFactoryBean.java:373)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.afterPropertiesSet(LocalSessionFactoryBean.java:358)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1547)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1485)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:524)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:323)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:107)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1393)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1134)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:522)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:626)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.preInstantiateSingletons(MonitoredListableBeanFactory.java:71)
+ at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:932)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.finishBeanFactoryInitialization(MonitoredGenericApplicationContext.java:74)
+ at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:479)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.refresh(MonitoredGenericApplicationContext.java:102)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.setNewDataSource(CdmApplicationController.java:264)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.<init>(CdmApplicationController.java:204)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.NewInstance(CdmApplicationController.java:148)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.getApplicationController(CdmStoreConnector.java:151)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.run(CdmStoreConnector.java:99)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+Caused by: org.h2.jdbc.JdbcSQLException: The connection was not closed by the application and is garbage collected [90018-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ ... 60 more
+06-15 17:38:06 jdbc[7]: java.lang.Exception: Open Stack Trace
+ at org.h2.util.CloseWatcher.register(CloseWatcher.java:99)
+ at org.h2.jdbc.JdbcConnection.<init>(JdbcConnection.java:121)
+ at org.h2.jdbc.JdbcConnection.<init>(JdbcConnection.java:93)
+ at org.h2.Driver.connect(Driver.java:72)
+ at java.sql.DriverManager.getConnection(DriverManager.java:571)
+ at java.sql.DriverManager.getConnection(DriverManager.java:215)
+ at eu.etaxonomy.cdm.database.CdmDataSourceBase.getConnection(CdmDataSourceBase.java:67)
+ at eu.etaxonomy.cdm.database.CdmPersistentDataSource.getConnection(CdmPersistentDataSource.java:51)
+ at eu.etaxonomy.cdm.database.CdmDataSourceBase.getConnection(CdmDataSourceBase.java:45)
+ at eu.etaxonomy.cdm.database.CdmPersistentDataSource.getConnection(CdmPersistentDataSource.java:51)
+ at eu.etaxonomy.cdm.database.CdmDataSourceBase.executeQuery(CdmDataSourceBase.java:182)
+ at eu.etaxonomy.cdm.database.CdmPersistentDataSource.executeQuery(CdmPersistentDataSource.java:51)
+ at eu.etaxonomy.cdm.database.CdmDataSourceBase.getSingleValue(CdmDataSourceBase.java:136)
+ at eu.etaxonomy.cdm.database.CdmPersistentDataSource.getSingleValue(CdmPersistentDataSource.java:51)
+ at eu.etaxonomy.cdm.database.CdmDataSourceBase.getMetaDataMap(CdmDataSourceBase.java:288)
+ at eu.etaxonomy.cdm.database.CdmPersistentDataSource.getMetaDataMap(CdmPersistentDataSource.java:51)
+ at eu.etaxonomy.taxeditor.view.datasource.CdmMetaDataAwareDataSourceContainer.getMetaDataFromDataSource(CdmMetaDataAwareDataSourceContainer.java:84)
+ at eu.etaxonomy.taxeditor.view.datasource.CdmDataSourceViewPart$DataSourceJob.run(CdmDataSourceViewPart.java:140)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+
+org.h2.message.DbException: The connection was not closed by the application and is garbage collected [90018-170]
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.message.DbException.get(DbException.java:135)
+ at org.h2.jdbc.JdbcConnection.closeOld(JdbcConnection.java:175)
+ at org.h2.jdbc.JdbcConnection.<init>(JdbcConnection.java:120)
+ at org.h2.jdbc.JdbcConnection.<init>(JdbcConnection.java:93)
+ at org.h2.Driver.connect(Driver.java:72)
+ at org.apache.commons.dbcp.DriverConnectionFactory.createConnection(DriverConnectionFactory.java:38)
+ at org.apache.commons.dbcp.PoolableConnectionFactory.makeObject(PoolableConnectionFactory.java:582)
+ at org.apache.commons.dbcp.BasicDataSource.validateConnectionFactory(BasicDataSource.java:1556)
+ at org.apache.commons.dbcp.BasicDataSource.createPoolableConnectionFactory(BasicDataSource.java:1545)
+ at org.apache.commons.dbcp.BasicDataSource.createDataSource(BasicDataSource.java:1388)
+ at eu.etaxonomy.cdm.database.LocalH2.createDataSource(LocalH2.java:88)
+ at org.apache.commons.dbcp.BasicDataSource.getConnection(BasicDataSource.java:1044)
+ at org.hibernate.service.jdbc.connections.internal.DatasourceConnectionProviderImpl.getConnection(DatasourceConnectionProviderImpl.java:141)
+ at org.hibernate.engine.jdbc.internal.JdbcServicesImpl$ConnectionProviderJdbcConnectionAccess.obtainConnection(JdbcServicesImpl.java:242)
+ at org.hibernate.engine.jdbc.internal.JdbcServicesImpl.configure(JdbcServicesImpl.java:117)
+ at org.hibernate.service.internal.StandardServiceRegistryImpl.configureService(StandardServiceRegistryImpl.java:75)
+ at org.hibernate.service.internal.AbstractServiceRegistryImpl.initializeService(AbstractServiceRegistryImpl.java:159)
+ at org.hibernate.service.internal.AbstractServiceRegistryImpl.getService(AbstractServiceRegistryImpl.java:131)
+ at org.hibernate.cfg.SettingsFactory.buildSettings(SettingsFactory.java:77)
+ at org.hibernate.cfg.Configuration.buildSettingsInternal(Configuration.java:2276)
+ at org.hibernate.cfg.Configuration.buildSettings(Configuration.java:2272)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1741)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1781)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBuilder.buildSessionFactory(LocalSessionFactoryBuilder.java:247)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.buildSessionFactory(LocalSessionFactoryBean.java:373)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.afterPropertiesSet(LocalSessionFactoryBean.java:358)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1547)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1485)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:524)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:323)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:107)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1393)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1134)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:522)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:626)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.preInstantiateSingletons(MonitoredListableBeanFactory.java:71)
+ at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:932)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.finishBeanFactoryInitialization(MonitoredGenericApplicationContext.java:74)
+ at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:479)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.refresh(MonitoredGenericApplicationContext.java:102)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.setNewDataSource(CdmApplicationController.java:264)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.<init>(CdmApplicationController.java:204)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.NewInstance(CdmApplicationController.java:148)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.getApplicationController(CdmStoreConnector.java:151)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.run(CdmStoreConnector.java:99)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+Caused by: org.h2.jdbc.JdbcSQLException: The connection was not closed by the application and is garbage collected [90018-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ ... 60 more
+06-15 17:38:06 jdbc[7]: java.lang.Exception: Open Stack Trace
+ at org.h2.util.CloseWatcher.register(CloseWatcher.java:99)
+ at org.h2.jdbc.JdbcConnection.<init>(JdbcConnection.java:121)
+ at org.h2.jdbc.JdbcConnection.<init>(JdbcConnection.java:93)
+ at org.h2.Driver.connect(Driver.java:72)
+ at java.sql.DriverManager.getConnection(DriverManager.java:571)
+ at java.sql.DriverManager.getConnection(DriverManager.java:215)
+ at eu.etaxonomy.cdm.database.CdmDataSourceBase.getConnection(CdmDataSourceBase.java:67)
+ at eu.etaxonomy.cdm.database.CdmPersistentDataSource.getConnection(CdmPersistentDataSource.java:51)
+ at eu.etaxonomy.cdm.database.CdmDataSourceBase.getConnection(CdmDataSourceBase.java:45)
+ at eu.etaxonomy.cdm.database.CdmPersistentDataSource.getConnection(CdmPersistentDataSource.java:51)
+ at eu.etaxonomy.cdm.database.CdmDataSourceBase.executeQuery(CdmDataSourceBase.java:182)
+ at eu.etaxonomy.cdm.database.CdmPersistentDataSource.executeQuery(CdmPersistentDataSource.java:51)
+ at eu.etaxonomy.cdm.database.CdmDataSourceBase.getSingleValue(CdmDataSourceBase.java:136)
+ at eu.etaxonomy.cdm.database.CdmPersistentDataSource.getSingleValue(CdmPersistentDataSource.java:51)
+ at eu.etaxonomy.cdm.database.CdmDataSourceBase.getMetaDataMap(CdmDataSourceBase.java:288)
+ at eu.etaxonomy.cdm.database.CdmPersistentDataSource.getMetaDataMap(CdmPersistentDataSource.java:51)
+ at eu.etaxonomy.taxeditor.view.datasource.CdmMetaDataAwareDataSourceContainer.getMetaDataFromDataSource(CdmMetaDataAwareDataSourceContainer.java:84)
+ at eu.etaxonomy.taxeditor.view.datasource.CdmDataSourceViewPart$DataSourceJob.run(CdmDataSourceViewPart.java:140)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+
+org.h2.message.DbException: The connection was not closed by the application and is garbage collected [90018-170]
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.message.DbException.get(DbException.java:135)
+ at org.h2.jdbc.JdbcConnection.closeOld(JdbcConnection.java:175)
+ at org.h2.jdbc.JdbcConnection.<init>(JdbcConnection.java:120)
+ at org.h2.jdbc.JdbcConnection.<init>(JdbcConnection.java:93)
+ at org.h2.Driver.connect(Driver.java:72)
+ at org.apache.commons.dbcp.DriverConnectionFactory.createConnection(DriverConnectionFactory.java:38)
+ at org.apache.commons.dbcp.PoolableConnectionFactory.makeObject(PoolableConnectionFactory.java:582)
+ at org.apache.commons.dbcp.BasicDataSource.validateConnectionFactory(BasicDataSource.java:1556)
+ at org.apache.commons.dbcp.BasicDataSource.createPoolableConnectionFactory(BasicDataSource.java:1545)
+ at org.apache.commons.dbcp.BasicDataSource.createDataSource(BasicDataSource.java:1388)
+ at eu.etaxonomy.cdm.database.LocalH2.createDataSource(LocalH2.java:88)
+ at org.apache.commons.dbcp.BasicDataSource.getConnection(BasicDataSource.java:1044)
+ at org.hibernate.service.jdbc.connections.internal.DatasourceConnectionProviderImpl.getConnection(DatasourceConnectionProviderImpl.java:141)
+ at org.hibernate.engine.jdbc.internal.JdbcServicesImpl$ConnectionProviderJdbcConnectionAccess.obtainConnection(JdbcServicesImpl.java:242)
+ at org.hibernate.engine.jdbc.internal.JdbcServicesImpl.configure(JdbcServicesImpl.java:117)
+ at org.hibernate.service.internal.StandardServiceRegistryImpl.configureService(StandardServiceRegistryImpl.java:75)
+ at org.hibernate.service.internal.AbstractServiceRegistryImpl.initializeService(AbstractServiceRegistryImpl.java:159)
+ at org.hibernate.service.internal.AbstractServiceRegistryImpl.getService(AbstractServiceRegistryImpl.java:131)
+ at org.hibernate.cfg.SettingsFactory.buildSettings(SettingsFactory.java:77)
+ at org.hibernate.cfg.Configuration.buildSettingsInternal(Configuration.java:2276)
+ at org.hibernate.cfg.Configuration.buildSettings(Configuration.java:2272)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1741)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1781)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBuilder.buildSessionFactory(LocalSessionFactoryBuilder.java:247)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.buildSessionFactory(LocalSessionFactoryBean.java:373)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.afterPropertiesSet(LocalSessionFactoryBean.java:358)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1547)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1485)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:524)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:323)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:107)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1393)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1134)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:522)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:626)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.preInstantiateSingletons(MonitoredListableBeanFactory.java:71)
+ at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:932)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.finishBeanFactoryInitialization(MonitoredGenericApplicationContext.java:74)
+ at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:479)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.refresh(MonitoredGenericApplicationContext.java:102)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.setNewDataSource(CdmApplicationController.java:264)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.<init>(CdmApplicationController.java:204)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.NewInstance(CdmApplicationController.java:148)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.getApplicationController(CdmStoreConnector.java:151)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.run(CdmStoreConnector.java:99)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+Caused by: org.h2.jdbc.JdbcSQLException: The connection was not closed by the application and is garbage collected [90018-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ ... 60 more
+06-15 17:38:06 jdbc[7]: java.lang.Exception: Open Stack Trace
+ at org.h2.util.CloseWatcher.register(CloseWatcher.java:99)
+ at org.h2.jdbc.JdbcConnection.<init>(JdbcConnection.java:121)
+ at org.h2.jdbc.JdbcConnection.<init>(JdbcConnection.java:93)
+ at org.h2.Driver.connect(Driver.java:72)
+ at java.sql.DriverManager.getConnection(DriverManager.java:571)
+ at java.sql.DriverManager.getConnection(DriverManager.java:215)
+ at eu.etaxonomy.cdm.database.CdmDataSourceBase.getConnection(CdmDataSourceBase.java:67)
+ at eu.etaxonomy.cdm.database.CdmPersistentDataSource.getConnection(CdmPersistentDataSource.java:51)
+ at eu.etaxonomy.cdm.database.CdmDataSourceBase.getConnection(CdmDataSourceBase.java:45)
+ at eu.etaxonomy.cdm.database.CdmPersistentDataSource.getConnection(CdmPersistentDataSource.java:51)
+ at eu.etaxonomy.cdm.database.CdmDataSourceBase.executeQuery(CdmDataSourceBase.java:182)
+ at eu.etaxonomy.cdm.database.CdmPersistentDataSource.executeQuery(CdmPersistentDataSource.java:51)
+ at eu.etaxonomy.cdm.database.CdmDataSourceBase.getSingleValue(CdmDataSourceBase.java:136)
+ at eu.etaxonomy.cdm.database.CdmPersistentDataSource.getSingleValue(CdmPersistentDataSource.java:51)
+ at eu.etaxonomy.cdm.database.CdmDataSourceBase.getDbSchemaVersion(CdmDataSourceBase.java:156)
+ at eu.etaxonomy.cdm.database.CdmPersistentDataSource.getDbSchemaVersion(CdmPersistentDataSource.java:51)
+ at eu.etaxonomy.cdm.database.CdmDataSourceBase.isDbEmpty(CdmDataSourceBase.java:165)
+ at eu.etaxonomy.cdm.database.CdmPersistentDataSource.isDbEmpty(CdmPersistentDataSource.java:51)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.checkIsNonEmptyCdmDatabase(CdmStoreConnector.java:231)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.run(CdmStoreConnector.java:73)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+
+org.h2.message.DbException: The connection was not closed by the application and is garbage collected [90018-170]
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.message.DbException.get(DbException.java:135)
+ at org.h2.jdbc.JdbcConnection.closeOld(JdbcConnection.java:175)
+ at org.h2.jdbc.JdbcConnection.<init>(JdbcConnection.java:120)
+ at org.h2.jdbc.JdbcConnection.<init>(JdbcConnection.java:93)
+ at org.h2.Driver.connect(Driver.java:72)
+ at org.apache.commons.dbcp.DriverConnectionFactory.createConnection(DriverConnectionFactory.java:38)
+ at org.apache.commons.dbcp.PoolableConnectionFactory.makeObject(PoolableConnectionFactory.java:582)
+ at org.apache.commons.dbcp.BasicDataSource.validateConnectionFactory(BasicDataSource.java:1556)
+ at org.apache.commons.dbcp.BasicDataSource.createPoolableConnectionFactory(BasicDataSource.java:1545)
+ at org.apache.commons.dbcp.BasicDataSource.createDataSource(BasicDataSource.java:1388)
+ at eu.etaxonomy.cdm.database.LocalH2.createDataSource(LocalH2.java:88)
+ at org.apache.commons.dbcp.BasicDataSource.getConnection(BasicDataSource.java:1044)
+ at org.hibernate.service.jdbc.connections.internal.DatasourceConnectionProviderImpl.getConnection(DatasourceConnectionProviderImpl.java:141)
+ at org.hibernate.engine.jdbc.internal.JdbcServicesImpl$ConnectionProviderJdbcConnectionAccess.obtainConnection(JdbcServicesImpl.java:242)
+ at org.hibernate.engine.jdbc.internal.JdbcServicesImpl.configure(JdbcServicesImpl.java:117)
+ at org.hibernate.service.internal.StandardServiceRegistryImpl.configureService(StandardServiceRegistryImpl.java:75)
+ at org.hibernate.service.internal.AbstractServiceRegistryImpl.initializeService(AbstractServiceRegistryImpl.java:159)
+ at org.hibernate.service.internal.AbstractServiceRegistryImpl.getService(AbstractServiceRegistryImpl.java:131)
+ at org.hibernate.cfg.SettingsFactory.buildSettings(SettingsFactory.java:77)
+ at org.hibernate.cfg.Configuration.buildSettingsInternal(Configuration.java:2276)
+ at org.hibernate.cfg.Configuration.buildSettings(Configuration.java:2272)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1741)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1781)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBuilder.buildSessionFactory(LocalSessionFactoryBuilder.java:247)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.buildSessionFactory(LocalSessionFactoryBean.java:373)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.afterPropertiesSet(LocalSessionFactoryBean.java:358)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1547)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1485)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:524)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:323)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:107)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1393)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1134)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:522)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:626)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.preInstantiateSingletons(MonitoredListableBeanFactory.java:71)
+ at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:932)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.finishBeanFactoryInitialization(MonitoredGenericApplicationContext.java:74)
+ at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:479)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.refresh(MonitoredGenericApplicationContext.java:102)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.setNewDataSource(CdmApplicationController.java:264)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.<init>(CdmApplicationController.java:204)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.NewInstance(CdmApplicationController.java:148)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.getApplicationController(CdmStoreConnector.java:151)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.run(CdmStoreConnector.java:99)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+Caused by: org.h2.jdbc.JdbcSQLException: The connection was not closed by the application and is garbage collected [90018-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ ... 60 more
+06-15 17:38:06 jdbc[7]: java.lang.Exception: Open Stack Trace
+ at org.h2.util.CloseWatcher.register(CloseWatcher.java:99)
+ at org.h2.jdbc.JdbcConnection.<init>(JdbcConnection.java:121)
+ at org.h2.jdbc.JdbcConnection.<init>(JdbcConnection.java:93)
+ at org.h2.Driver.connect(Driver.java:72)
+ at java.sql.DriverManager.getConnection(DriverManager.java:571)
+ at java.sql.DriverManager.getConnection(DriverManager.java:215)
+ at eu.etaxonomy.cdm.database.CdmDataSourceBase.testConnection(CdmDataSourceBase.java:93)
+ at eu.etaxonomy.cdm.database.CdmPersistentDataSource.testConnection(CdmPersistentDataSource.java:51)
+ at eu.etaxonomy.cdm.database.CdmDataSourceBase.checkConnection(CdmDataSourceBase.java:110)
+ at eu.etaxonomy.cdm.database.CdmPersistentDataSource.checkConnection(CdmPersistentDataSource.java:51)
+ at eu.etaxonomy.taxeditor.view.datasource.handler.ChangeConnectionHandler.execute(ChangeConnectionHandler.java:49)
+ at org.eclipse.ui.internal.handlers.HandlerProxy.execute(HandlerProxy.java:293)
+ at org.eclipse.core.commands.Command.executeWithChecks(Command.java:476)
+ at org.eclipse.core.commands.ParameterizedCommand.executeWithChecks(ParameterizedCommand.java:508)
+ at org.eclipse.ui.internal.handlers.HandlerService.executeCommand(HandlerService.java:169)
+ at org.eclipse.ui.internal.handlers.SlaveHandlerService.executeCommand(SlaveHandlerService.java:241)
+ at org.eclipse.ui.internal.handlers.SlaveHandlerService.executeCommand(SlaveHandlerService.java:241)
+ at org.eclipse.ui.menus.CommandContributionItem.handleWidgetSelection(CommandContributionItem.java:829)
+ at org.eclipse.ui.menus.CommandContributionItem.access$19(CommandContributionItem.java:815)
+ at org.eclipse.ui.menus.CommandContributionItem$5.handleEvent(CommandContributionItem.java:805)
+ at org.eclipse.swt.widgets.EventTable.sendEvent(EventTable.java:84)
+ at org.eclipse.swt.widgets.Widget.sendEvent(Widget.java:1258)
+ at org.eclipse.swt.widgets.Display.runDeferredEvents(Display.java:3588)
+ at org.eclipse.swt.widgets.Display.readAndDispatch(Display.java:3209)
+ at org.eclipse.ui.internal.Workbench.runEventLoop(Workbench.java:2701)
+ at org.eclipse.ui.internal.Workbench.runUI(Workbench.java:2665)
+ at org.eclipse.ui.internal.Workbench.access$4(Workbench.java:2499)
+ at org.eclipse.ui.internal.Workbench$7.run(Workbench.java:679)
+ at org.eclipse.core.databinding.observable.Realm.runWithDefault(Realm.java:332)
+ at org.eclipse.ui.internal.Workbench.createAndRunWorkbench(Workbench.java:668)
+ at org.eclipse.ui.PlatformUI.createAndRunWorkbench(PlatformUI.java:149)
+ at eu.etaxonomy.taxeditor.Application.start(Application.java:24)
+ at org.eclipse.equinox.internal.app.EclipseAppHandle.run(EclipseAppHandle.java:196)
+ at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.runApplication(EclipseAppLauncher.java:110)
+ at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.start(EclipseAppLauncher.java:79)
+ at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:344)
+ at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:179)
+ at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
+ at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
+ at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
+ at java.lang.reflect.Method.invoke(Method.java:606)
+ at org.eclipse.equinox.launcher.Main.invokeFramework(Main.java:622)
+ at org.eclipse.equinox.launcher.Main.basicRun(Main.java:577)
+ at org.eclipse.equinox.launcher.Main.run(Main.java:1410)
+ at org.eclipse.equinox.launcher.Main.main(Main.java:1386)
+
+org.h2.message.DbException: The connection was not closed by the application and is garbage collected [90018-170]
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.message.DbException.get(DbException.java:135)
+ at org.h2.jdbc.JdbcConnection.closeOld(JdbcConnection.java:175)
+ at org.h2.jdbc.JdbcConnection.<init>(JdbcConnection.java:120)
+ at org.h2.jdbc.JdbcConnection.<init>(JdbcConnection.java:93)
+ at org.h2.Driver.connect(Driver.java:72)
+ at org.apache.commons.dbcp.DriverConnectionFactory.createConnection(DriverConnectionFactory.java:38)
+ at org.apache.commons.dbcp.PoolableConnectionFactory.makeObject(PoolableConnectionFactory.java:582)
+ at org.apache.commons.dbcp.BasicDataSource.validateConnectionFactory(BasicDataSource.java:1556)
+ at org.apache.commons.dbcp.BasicDataSource.createPoolableConnectionFactory(BasicDataSource.java:1545)
+ at org.apache.commons.dbcp.BasicDataSource.createDataSource(BasicDataSource.java:1388)
+ at eu.etaxonomy.cdm.database.LocalH2.createDataSource(LocalH2.java:88)
+ at org.apache.commons.dbcp.BasicDataSource.getConnection(BasicDataSource.java:1044)
+ at org.hibernate.service.jdbc.connections.internal.DatasourceConnectionProviderImpl.getConnection(DatasourceConnectionProviderImpl.java:141)
+ at org.hibernate.engine.jdbc.internal.JdbcServicesImpl$ConnectionProviderJdbcConnectionAccess.obtainConnection(JdbcServicesImpl.java:242)
+ at org.hibernate.engine.jdbc.internal.JdbcServicesImpl.configure(JdbcServicesImpl.java:117)
+ at org.hibernate.service.internal.StandardServiceRegistryImpl.configureService(StandardServiceRegistryImpl.java:75)
+ at org.hibernate.service.internal.AbstractServiceRegistryImpl.initializeService(AbstractServiceRegistryImpl.java:159)
+ at org.hibernate.service.internal.AbstractServiceRegistryImpl.getService(AbstractServiceRegistryImpl.java:131)
+ at org.hibernate.cfg.SettingsFactory.buildSettings(SettingsFactory.java:77)
+ at org.hibernate.cfg.Configuration.buildSettingsInternal(Configuration.java:2276)
+ at org.hibernate.cfg.Configuration.buildSettings(Configuration.java:2272)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1741)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1781)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBuilder.buildSessionFactory(LocalSessionFactoryBuilder.java:247)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.buildSessionFactory(LocalSessionFactoryBean.java:373)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.afterPropertiesSet(LocalSessionFactoryBean.java:358)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1547)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1485)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:524)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:323)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:107)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1393)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1134)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:522)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:626)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.preInstantiateSingletons(MonitoredListableBeanFactory.java:71)
+ at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:932)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.finishBeanFactoryInitialization(MonitoredGenericApplicationContext.java:74)
+ at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:479)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.refresh(MonitoredGenericApplicationContext.java:102)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.setNewDataSource(CdmApplicationController.java:264)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.<init>(CdmApplicationController.java:204)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.NewInstance(CdmApplicationController.java:148)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.getApplicationController(CdmStoreConnector.java:151)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.run(CdmStoreConnector.java:99)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+Caused by: org.h2.jdbc.JdbcSQLException: The connection was not closed by the application and is garbage collected [90018-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ ... 60 more
+06-15 17:38:06 jdbc[7]: java.lang.Exception: Open Stack Trace
+ at org.h2.util.CloseWatcher.register(CloseWatcher.java:99)
+ at org.h2.jdbc.JdbcConnection.<init>(JdbcConnection.java:121)
+ at org.h2.jdbc.JdbcConnection.<init>(JdbcConnection.java:93)
+ at org.h2.Driver.connect(Driver.java:72)
+ at java.sql.DriverManager.getConnection(DriverManager.java:571)
+ at java.sql.DriverManager.getConnection(DriverManager.java:215)
+ at eu.etaxonomy.cdm.database.CdmDataSourceBase.getConnection(CdmDataSourceBase.java:67)
+ at eu.etaxonomy.cdm.database.CdmPersistentDataSource.getConnection(CdmPersistentDataSource.java:51)
+ at eu.etaxonomy.cdm.database.CdmDataSourceBase.getConnection(CdmDataSourceBase.java:45)
+ at eu.etaxonomy.cdm.database.CdmPersistentDataSource.getConnection(CdmPersistentDataSource.java:51)
+ at eu.etaxonomy.cdm.database.CdmDataSourceBase.executeQuery(CdmDataSourceBase.java:182)
+ at eu.etaxonomy.cdm.database.CdmPersistentDataSource.executeQuery(CdmPersistentDataSource.java:51)
+ at eu.etaxonomy.cdm.database.CdmDataSourceBase.getSingleValue(CdmDataSourceBase.java:136)
+ at eu.etaxonomy.cdm.database.CdmPersistentDataSource.getSingleValue(CdmPersistentDataSource.java:51)
+ at eu.etaxonomy.cdm.database.CdmDataSourceBase.getMetaDataMap(CdmDataSourceBase.java:288)
+ at eu.etaxonomy.cdm.database.CdmPersistentDataSource.getMetaDataMap(CdmPersistentDataSource.java:51)
+ at eu.etaxonomy.taxeditor.view.datasource.CdmMetaDataAwareDataSourceContainer.getMetaDataFromDataSource(CdmMetaDataAwareDataSourceContainer.java:84)
+ at eu.etaxonomy.taxeditor.view.datasource.CdmDataSourceViewPart$DataSourceJob.run(CdmDataSourceViewPart.java:140)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+
+org.h2.message.DbException: The connection was not closed by the application and is garbage collected [90018-170]
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.message.DbException.get(DbException.java:135)
+ at org.h2.jdbc.JdbcConnection.closeOld(JdbcConnection.java:175)
+ at org.h2.jdbc.JdbcConnection.<init>(JdbcConnection.java:120)
+ at org.h2.jdbc.JdbcConnection.<init>(JdbcConnection.java:93)
+ at org.h2.Driver.connect(Driver.java:72)
+ at org.apache.commons.dbcp.DriverConnectionFactory.createConnection(DriverConnectionFactory.java:38)
+ at org.apache.commons.dbcp.PoolableConnectionFactory.makeObject(PoolableConnectionFactory.java:582)
+ at org.apache.commons.dbcp.BasicDataSource.validateConnectionFactory(BasicDataSource.java:1556)
+ at org.apache.commons.dbcp.BasicDataSource.createPoolableConnectionFactory(BasicDataSource.java:1545)
+ at org.apache.commons.dbcp.BasicDataSource.createDataSource(BasicDataSource.java:1388)
+ at eu.etaxonomy.cdm.database.LocalH2.createDataSource(LocalH2.java:88)
+ at org.apache.commons.dbcp.BasicDataSource.getConnection(BasicDataSource.java:1044)
+ at org.hibernate.service.jdbc.connections.internal.DatasourceConnectionProviderImpl.getConnection(DatasourceConnectionProviderImpl.java:141)
+ at org.hibernate.engine.jdbc.internal.JdbcServicesImpl$ConnectionProviderJdbcConnectionAccess.obtainConnection(JdbcServicesImpl.java:242)
+ at org.hibernate.engine.jdbc.internal.JdbcServicesImpl.configure(JdbcServicesImpl.java:117)
+ at org.hibernate.service.internal.StandardServiceRegistryImpl.configureService(StandardServiceRegistryImpl.java:75)
+ at org.hibernate.service.internal.AbstractServiceRegistryImpl.initializeService(AbstractServiceRegistryImpl.java:159)
+ at org.hibernate.service.internal.AbstractServiceRegistryImpl.getService(AbstractServiceRegistryImpl.java:131)
+ at org.hibernate.cfg.SettingsFactory.buildSettings(SettingsFactory.java:77)
+ at org.hibernate.cfg.Configuration.buildSettingsInternal(Configuration.java:2276)
+ at org.hibernate.cfg.Configuration.buildSettings(Configuration.java:2272)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1741)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1781)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBuilder.buildSessionFactory(LocalSessionFactoryBuilder.java:247)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.buildSessionFactory(LocalSessionFactoryBean.java:373)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.afterPropertiesSet(LocalSessionFactoryBean.java:358)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1547)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1485)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:524)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:323)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:107)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1393)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1134)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:522)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:626)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.preInstantiateSingletons(MonitoredListableBeanFactory.java:71)
+ at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:932)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.finishBeanFactoryInitialization(MonitoredGenericApplicationContext.java:74)
+ at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:479)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.refresh(MonitoredGenericApplicationContext.java:102)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.setNewDataSource(CdmApplicationController.java:264)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.<init>(CdmApplicationController.java:204)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.NewInstance(CdmApplicationController.java:148)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.getApplicationController(CdmStoreConnector.java:151)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.run(CdmStoreConnector.java:99)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+Caused by: org.h2.jdbc.JdbcSQLException: The connection was not closed by the application and is garbage collected [90018-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ ... 60 more
+06-15 17:38:06 jdbc[7]: java.lang.Exception: Open Stack Trace
+ at org.h2.util.CloseWatcher.register(CloseWatcher.java:99)
+ at org.h2.jdbc.JdbcConnection.<init>(JdbcConnection.java:121)
+ at org.h2.jdbc.JdbcConnection.<init>(JdbcConnection.java:93)
+ at org.h2.Driver.connect(Driver.java:72)
+ at java.sql.DriverManager.getConnection(DriverManager.java:571)
+ at java.sql.DriverManager.getConnection(DriverManager.java:215)
+ at eu.etaxonomy.cdm.database.CdmDataSourceBase.getConnection(CdmDataSourceBase.java:67)
+ at eu.etaxonomy.cdm.database.CdmPersistentDataSource.getConnection(CdmPersistentDataSource.java:51)
+ at eu.etaxonomy.cdm.database.CdmDataSourceBase.getConnection(CdmDataSourceBase.java:45)
+ at eu.etaxonomy.cdm.database.CdmPersistentDataSource.getConnection(CdmPersistentDataSource.java:51)
+ at eu.etaxonomy.cdm.database.CdmDataSourceBase.executeQuery(CdmDataSourceBase.java:182)
+ at eu.etaxonomy.cdm.database.CdmPersistentDataSource.executeQuery(CdmPersistentDataSource.java:51)
+ at eu.etaxonomy.cdm.database.CdmDataSourceBase.getSingleValue(CdmDataSourceBase.java:136)
+ at eu.etaxonomy.cdm.database.CdmPersistentDataSource.getSingleValue(CdmPersistentDataSource.java:51)
+ at eu.etaxonomy.cdm.database.CdmDataSourceBase.getMetaDataMap(CdmDataSourceBase.java:288)
+ at eu.etaxonomy.cdm.database.CdmPersistentDataSource.getMetaDataMap(CdmPersistentDataSource.java:51)
+ at eu.etaxonomy.taxeditor.view.datasource.CdmMetaDataAwareDataSourceContainer.getMetaDataFromDataSource(CdmMetaDataAwareDataSourceContainer.java:84)
+ at eu.etaxonomy.taxeditor.view.datasource.CdmDataSourceViewPart$DataSourceJob.run(CdmDataSourceViewPart.java:140)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+
+org.h2.message.DbException: The connection was not closed by the application and is garbage collected [90018-170]
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.message.DbException.get(DbException.java:135)
+ at org.h2.jdbc.JdbcConnection.closeOld(JdbcConnection.java:175)
+ at org.h2.jdbc.JdbcConnection.<init>(JdbcConnection.java:120)
+ at org.h2.jdbc.JdbcConnection.<init>(JdbcConnection.java:93)
+ at org.h2.Driver.connect(Driver.java:72)
+ at org.apache.commons.dbcp.DriverConnectionFactory.createConnection(DriverConnectionFactory.java:38)
+ at org.apache.commons.dbcp.PoolableConnectionFactory.makeObject(PoolableConnectionFactory.java:582)
+ at org.apache.commons.dbcp.BasicDataSource.validateConnectionFactory(BasicDataSource.java:1556)
+ at org.apache.commons.dbcp.BasicDataSource.createPoolableConnectionFactory(BasicDataSource.java:1545)
+ at org.apache.commons.dbcp.BasicDataSource.createDataSource(BasicDataSource.java:1388)
+ at eu.etaxonomy.cdm.database.LocalH2.createDataSource(LocalH2.java:88)
+ at org.apache.commons.dbcp.BasicDataSource.getConnection(BasicDataSource.java:1044)
+ at org.hibernate.service.jdbc.connections.internal.DatasourceConnectionProviderImpl.getConnection(DatasourceConnectionProviderImpl.java:141)
+ at org.hibernate.engine.jdbc.internal.JdbcServicesImpl$ConnectionProviderJdbcConnectionAccess.obtainConnection(JdbcServicesImpl.java:242)
+ at org.hibernate.engine.jdbc.internal.JdbcServicesImpl.configure(JdbcServicesImpl.java:117)
+ at org.hibernate.service.internal.StandardServiceRegistryImpl.configureService(StandardServiceRegistryImpl.java:75)
+ at org.hibernate.service.internal.AbstractServiceRegistryImpl.initializeService(AbstractServiceRegistryImpl.java:159)
+ at org.hibernate.service.internal.AbstractServiceRegistryImpl.getService(AbstractServiceRegistryImpl.java:131)
+ at org.hibernate.cfg.SettingsFactory.buildSettings(SettingsFactory.java:77)
+ at org.hibernate.cfg.Configuration.buildSettingsInternal(Configuration.java:2276)
+ at org.hibernate.cfg.Configuration.buildSettings(Configuration.java:2272)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1741)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1781)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBuilder.buildSessionFactory(LocalSessionFactoryBuilder.java:247)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.buildSessionFactory(LocalSessionFactoryBean.java:373)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.afterPropertiesSet(LocalSessionFactoryBean.java:358)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1547)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1485)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:524)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:323)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:107)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1393)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1134)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:522)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:626)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.preInstantiateSingletons(MonitoredListableBeanFactory.java:71)
+ at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:932)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.finishBeanFactoryInitialization(MonitoredGenericApplicationContext.java:74)
+ at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:479)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.refresh(MonitoredGenericApplicationContext.java:102)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.setNewDataSource(CdmApplicationController.java:264)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.<init>(CdmApplicationController.java:204)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.NewInstance(CdmApplicationController.java:148)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.getApplicationController(CdmStoreConnector.java:151)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.run(CdmStoreConnector.java:99)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+Caused by: org.h2.jdbc.JdbcSQLException: The connection was not closed by the application and is garbage collected [90018-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ ... 60 more
+06-15 17:38:06 jdbc[7]: java.lang.Exception: Open Stack Trace
+ at org.h2.util.CloseWatcher.register(CloseWatcher.java:99)
+ at org.h2.jdbc.JdbcConnection.<init>(JdbcConnection.java:121)
+ at org.h2.jdbc.JdbcConnection.<init>(JdbcConnection.java:93)
+ at org.h2.Driver.connect(Driver.java:72)
+ at java.sql.DriverManager.getConnection(DriverManager.java:571)
+ at java.sql.DriverManager.getConnection(DriverManager.java:215)
+ at eu.etaxonomy.cdm.database.CdmDataSourceBase.getConnection(CdmDataSourceBase.java:67)
+ at eu.etaxonomy.cdm.database.CdmPersistentDataSource.getConnection(CdmPersistentDataSource.java:51)
+ at eu.etaxonomy.cdm.database.CdmDataSourceBase.getConnection(CdmDataSourceBase.java:45)
+ at eu.etaxonomy.cdm.database.CdmPersistentDataSource.getConnection(CdmPersistentDataSource.java:51)
+ at eu.etaxonomy.cdm.database.CdmDataSourceBase.executeQuery(CdmDataSourceBase.java:182)
+ at eu.etaxonomy.cdm.database.CdmPersistentDataSource.executeQuery(CdmPersistentDataSource.java:51)
+ at eu.etaxonomy.cdm.database.CdmDataSourceBase.getSingleValue(CdmDataSourceBase.java:136)
+ at eu.etaxonomy.cdm.database.CdmPersistentDataSource.getSingleValue(CdmPersistentDataSource.java:51)
+ at eu.etaxonomy.cdm.database.CdmDataSourceBase.getMetaDataMap(CdmDataSourceBase.java:288)
+ at eu.etaxonomy.cdm.database.CdmPersistentDataSource.getMetaDataMap(CdmPersistentDataSource.java:51)
+ at eu.etaxonomy.taxeditor.view.datasource.CdmMetaDataAwareDataSourceContainer.getMetaDataFromDataSource(CdmMetaDataAwareDataSourceContainer.java:84)
+ at eu.etaxonomy.taxeditor.view.datasource.CdmDataSourceViewPart$DataSourceJob.run(CdmDataSourceViewPart.java:140)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+
+org.h2.message.DbException: The connection was not closed by the application and is garbage collected [90018-170]
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.message.DbException.get(DbException.java:135)
+ at org.h2.jdbc.JdbcConnection.closeOld(JdbcConnection.java:175)
+ at org.h2.jdbc.JdbcConnection.<init>(JdbcConnection.java:120)
+ at org.h2.jdbc.JdbcConnection.<init>(JdbcConnection.java:93)
+ at org.h2.Driver.connect(Driver.java:72)
+ at org.apache.commons.dbcp.DriverConnectionFactory.createConnection(DriverConnectionFactory.java:38)
+ at org.apache.commons.dbcp.PoolableConnectionFactory.makeObject(PoolableConnectionFactory.java:582)
+ at org.apache.commons.dbcp.BasicDataSource.validateConnectionFactory(BasicDataSource.java:1556)
+ at org.apache.commons.dbcp.BasicDataSource.createPoolableConnectionFactory(BasicDataSource.java:1545)
+ at org.apache.commons.dbcp.BasicDataSource.createDataSource(BasicDataSource.java:1388)
+ at eu.etaxonomy.cdm.database.LocalH2.createDataSource(LocalH2.java:88)
+ at org.apache.commons.dbcp.BasicDataSource.getConnection(BasicDataSource.java:1044)
+ at org.hibernate.service.jdbc.connections.internal.DatasourceConnectionProviderImpl.getConnection(DatasourceConnectionProviderImpl.java:141)
+ at org.hibernate.engine.jdbc.internal.JdbcServicesImpl$ConnectionProviderJdbcConnectionAccess.obtainConnection(JdbcServicesImpl.java:242)
+ at org.hibernate.engine.jdbc.internal.JdbcServicesImpl.configure(JdbcServicesImpl.java:117)
+ at org.hibernate.service.internal.StandardServiceRegistryImpl.configureService(StandardServiceRegistryImpl.java:75)
+ at org.hibernate.service.internal.AbstractServiceRegistryImpl.initializeService(AbstractServiceRegistryImpl.java:159)
+ at org.hibernate.service.internal.AbstractServiceRegistryImpl.getService(AbstractServiceRegistryImpl.java:131)
+ at org.hibernate.cfg.SettingsFactory.buildSettings(SettingsFactory.java:77)
+ at org.hibernate.cfg.Configuration.buildSettingsInternal(Configuration.java:2276)
+ at org.hibernate.cfg.Configuration.buildSettings(Configuration.java:2272)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1741)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1781)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBuilder.buildSessionFactory(LocalSessionFactoryBuilder.java:247)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.buildSessionFactory(LocalSessionFactoryBean.java:373)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.afterPropertiesSet(LocalSessionFactoryBean.java:358)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1547)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1485)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:524)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:323)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:107)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1393)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1134)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:522)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:626)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.preInstantiateSingletons(MonitoredListableBeanFactory.java:71)
+ at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:932)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.finishBeanFactoryInitialization(MonitoredGenericApplicationContext.java:74)
+ at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:479)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.refresh(MonitoredGenericApplicationContext.java:102)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.setNewDataSource(CdmApplicationController.java:264)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.<init>(CdmApplicationController.java:204)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.NewInstance(CdmApplicationController.java:148)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.getApplicationController(CdmStoreConnector.java:151)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.run(CdmStoreConnector.java:99)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+Caused by: org.h2.jdbc.JdbcSQLException: The connection was not closed by the application and is garbage collected [90018-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ ... 60 more
+06-15 17:38:06 jdbc[7]: java.lang.Exception: Open Stack Trace
+ at org.h2.util.CloseWatcher.register(CloseWatcher.java:99)
+ at org.h2.jdbc.JdbcConnection.<init>(JdbcConnection.java:121)
+ at org.h2.jdbc.JdbcConnection.<init>(JdbcConnection.java:93)
+ at org.h2.Driver.connect(Driver.java:72)
+ at java.sql.DriverManager.getConnection(DriverManager.java:571)
+ at java.sql.DriverManager.getConnection(DriverManager.java:215)
+ at eu.etaxonomy.cdm.database.CdmDataSourceBase.testConnection(CdmDataSourceBase.java:93)
+ at eu.etaxonomy.cdm.database.CdmPersistentDataSource.testConnection(CdmPersistentDataSource.java:51)
+ at eu.etaxonomy.cdm.database.CdmDataSourceBase.checkConnection(CdmDataSourceBase.java:110)
+ at eu.etaxonomy.cdm.database.CdmPersistentDataSource.checkConnection(CdmPersistentDataSource.java:51)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.checkDatabaseReachable(CdmStoreConnector.java:253)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.run(CdmStoreConnector.java:69)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+
+org.h2.message.DbException: The connection was not closed by the application and is garbage collected [90018-170]
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.message.DbException.get(DbException.java:135)
+ at org.h2.jdbc.JdbcConnection.closeOld(JdbcConnection.java:175)
+ at org.h2.jdbc.JdbcConnection.<init>(JdbcConnection.java:120)
+ at org.h2.jdbc.JdbcConnection.<init>(JdbcConnection.java:93)
+ at org.h2.Driver.connect(Driver.java:72)
+ at org.apache.commons.dbcp.DriverConnectionFactory.createConnection(DriverConnectionFactory.java:38)
+ at org.apache.commons.dbcp.PoolableConnectionFactory.makeObject(PoolableConnectionFactory.java:582)
+ at org.apache.commons.dbcp.BasicDataSource.validateConnectionFactory(BasicDataSource.java:1556)
+ at org.apache.commons.dbcp.BasicDataSource.createPoolableConnectionFactory(BasicDataSource.java:1545)
+ at org.apache.commons.dbcp.BasicDataSource.createDataSource(BasicDataSource.java:1388)
+ at eu.etaxonomy.cdm.database.LocalH2.createDataSource(LocalH2.java:88)
+ at org.apache.commons.dbcp.BasicDataSource.getConnection(BasicDataSource.java:1044)
+ at org.hibernate.service.jdbc.connections.internal.DatasourceConnectionProviderImpl.getConnection(DatasourceConnectionProviderImpl.java:141)
+ at org.hibernate.engine.jdbc.internal.JdbcServicesImpl$ConnectionProviderJdbcConnectionAccess.obtainConnection(JdbcServicesImpl.java:242)
+ at org.hibernate.engine.jdbc.internal.JdbcServicesImpl.configure(JdbcServicesImpl.java:117)
+ at org.hibernate.service.internal.StandardServiceRegistryImpl.configureService(StandardServiceRegistryImpl.java:75)
+ at org.hibernate.service.internal.AbstractServiceRegistryImpl.initializeService(AbstractServiceRegistryImpl.java:159)
+ at org.hibernate.service.internal.AbstractServiceRegistryImpl.getService(AbstractServiceRegistryImpl.java:131)
+ at org.hibernate.cfg.SettingsFactory.buildSettings(SettingsFactory.java:77)
+ at org.hibernate.cfg.Configuration.buildSettingsInternal(Configuration.java:2276)
+ at org.hibernate.cfg.Configuration.buildSettings(Configuration.java:2272)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1741)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1781)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBuilder.buildSessionFactory(LocalSessionFactoryBuilder.java:247)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.buildSessionFactory(LocalSessionFactoryBean.java:373)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.afterPropertiesSet(LocalSessionFactoryBean.java:358)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1547)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1485)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:524)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:323)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:107)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1393)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1134)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:522)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:626)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.preInstantiateSingletons(MonitoredListableBeanFactory.java:71)
+ at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:932)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.finishBeanFactoryInitialization(MonitoredGenericApplicationContext.java:74)
+ at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:479)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.refresh(MonitoredGenericApplicationContext.java:102)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.setNewDataSource(CdmApplicationController.java:264)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.<init>(CdmApplicationController.java:204)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.NewInstance(CdmApplicationController.java:148)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.getApplicationController(CdmStoreConnector.java:151)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.run(CdmStoreConnector.java:99)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+Caused by: org.h2.jdbc.JdbcSQLException: The connection was not closed by the application and is garbage collected [90018-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ ... 60 more
+06-15 17:38:06 jdbc[7]: java.lang.Exception: Open Stack Trace
+ at org.h2.util.CloseWatcher.register(CloseWatcher.java:99)
+ at org.h2.jdbc.JdbcConnection.<init>(JdbcConnection.java:121)
+ at org.h2.jdbc.JdbcConnection.<init>(JdbcConnection.java:93)
+ at org.h2.Driver.connect(Driver.java:72)
+ at java.sql.DriverManager.getConnection(DriverManager.java:571)
+ at java.sql.DriverManager.getConnection(DriverManager.java:215)
+ at eu.etaxonomy.cdm.database.CdmDataSourceBase.testConnection(CdmDataSourceBase.java:93)
+ at eu.etaxonomy.cdm.database.CdmPersistentDataSource.testConnection(CdmPersistentDataSource.java:51)
+ at eu.etaxonomy.cdm.database.CdmDataSourceBase.checkConnection(CdmDataSourceBase.java:110)
+ at eu.etaxonomy.cdm.database.CdmPersistentDataSource.checkConnection(CdmPersistentDataSource.java:51)
+ at eu.etaxonomy.taxeditor.view.datasource.CdmMetaDataAwareDataSourceContainer.getMetaDataFromDataSource(CdmMetaDataAwareDataSourceContainer.java:72)
+ at eu.etaxonomy.taxeditor.view.datasource.CdmDataSourceViewPart$DataSourceJob.run(CdmDataSourceViewPart.java:140)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+
+org.h2.message.DbException: The connection was not closed by the application and is garbage collected [90018-170]
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.message.DbException.get(DbException.java:135)
+ at org.h2.jdbc.JdbcConnection.closeOld(JdbcConnection.java:175)
+ at org.h2.jdbc.JdbcConnection.<init>(JdbcConnection.java:120)
+ at org.h2.jdbc.JdbcConnection.<init>(JdbcConnection.java:93)
+ at org.h2.Driver.connect(Driver.java:72)
+ at org.apache.commons.dbcp.DriverConnectionFactory.createConnection(DriverConnectionFactory.java:38)
+ at org.apache.commons.dbcp.PoolableConnectionFactory.makeObject(PoolableConnectionFactory.java:582)
+ at org.apache.commons.dbcp.BasicDataSource.validateConnectionFactory(BasicDataSource.java:1556)
+ at org.apache.commons.dbcp.BasicDataSource.createPoolableConnectionFactory(BasicDataSource.java:1545)
+ at org.apache.commons.dbcp.BasicDataSource.createDataSource(BasicDataSource.java:1388)
+ at eu.etaxonomy.cdm.database.LocalH2.createDataSource(LocalH2.java:88)
+ at org.apache.commons.dbcp.BasicDataSource.getConnection(BasicDataSource.java:1044)
+ at org.hibernate.service.jdbc.connections.internal.DatasourceConnectionProviderImpl.getConnection(DatasourceConnectionProviderImpl.java:141)
+ at org.hibernate.engine.jdbc.internal.JdbcServicesImpl$ConnectionProviderJdbcConnectionAccess.obtainConnection(JdbcServicesImpl.java:242)
+ at org.hibernate.engine.jdbc.internal.JdbcServicesImpl.configure(JdbcServicesImpl.java:117)
+ at org.hibernate.service.internal.StandardServiceRegistryImpl.configureService(StandardServiceRegistryImpl.java:75)
+ at org.hibernate.service.internal.AbstractServiceRegistryImpl.initializeService(AbstractServiceRegistryImpl.java:159)
+ at org.hibernate.service.internal.AbstractServiceRegistryImpl.getService(AbstractServiceRegistryImpl.java:131)
+ at org.hibernate.cfg.SettingsFactory.buildSettings(SettingsFactory.java:77)
+ at org.hibernate.cfg.Configuration.buildSettingsInternal(Configuration.java:2276)
+ at org.hibernate.cfg.Configuration.buildSettings(Configuration.java:2272)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1741)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1781)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBuilder.buildSessionFactory(LocalSessionFactoryBuilder.java:247)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.buildSessionFactory(LocalSessionFactoryBean.java:373)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.afterPropertiesSet(LocalSessionFactoryBean.java:358)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1547)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1485)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:524)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:323)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:107)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1393)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1134)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:522)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:626)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.preInstantiateSingletons(MonitoredListableBeanFactory.java:71)
+ at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:932)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.finishBeanFactoryInitialization(MonitoredGenericApplicationContext.java:74)
+ at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:479)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.refresh(MonitoredGenericApplicationContext.java:102)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.setNewDataSource(CdmApplicationController.java:264)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.<init>(CdmApplicationController.java:204)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.NewInstance(CdmApplicationController.java:148)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.getApplicationController(CdmStoreConnector.java:151)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.run(CdmStoreConnector.java:99)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+Caused by: org.h2.jdbc.JdbcSQLException: The connection was not closed by the application and is garbage collected [90018-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ ... 60 more
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "ADDRESS" not found; SQL statement:
+alter table Address drop constraint FK1ED033D44FF2DB2C [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "ADDRESS" not found; SQL statement:
+alter table Address drop constraint FK1ED033D4BC5DA539 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "ADDRESS" not found; SQL statement:
+alter table Address drop constraint FK1ED033D4CDD3C17E [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "ADDRESS" not found; SQL statement:
+alter table Address drop constraint FK1ED033D4132A2FE8 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "ADDRESS_AUD" not found; SQL statement:
+alter table Address_AUD drop constraint FK115657A534869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AGENTBASE" not found; SQL statement:
+alter table AgentBase drop constraint FK1205D3564FF2DB2C [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AGENTBASE" not found; SQL statement:
+alter table AgentBase drop constraint FK1205D356BC5DA539 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AGENTBASE" not found; SQL statement:
+alter table AgentBase drop constraint FK1205D356A830578 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AGENTBASE_AUD" not found; SQL statement:
+alter table AgentBase_AUD drop constraint FK29CC662734869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AGENTBASE_ADDRESS" not found; SQL statement:
+alter table AgentBase_Address drop constraint FK1EDFF7EB50751EC5 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AGENTBASE_ADDRESS" not found; SQL statement:
+alter table AgentBase_Address drop constraint FK1EDFF7EB86EFC5D4 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AGENTBASE_ADDRESS_AUD" not found; SQL statement:
+alter table AgentBase_Address_AUD drop constraint FK3D28383C34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AGENTBASE_AGENTBASE" not found; SQL statement:
+alter table AgentBase_AgentBase drop constraint FK4D34EDADE9E535F9 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AGENTBASE_AGENTBASE" not found; SQL statement:
+alter table AgentBase_AgentBase drop constraint FK4D34EDAD1C0E9907 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AGENTBASE_AGENTBASE_AUD" not found; SQL statement:
+alter table AgentBase_AgentBase_AUD drop constraint FKA8A87CFE34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AGENTBASE_ANNOTATION" not found; SQL statement:
+alter table AgentBase_Annotation drop constraint FK44D5F7D81E403E0B [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AGENTBASE_ANNOTATION" not found; SQL statement:
+alter table AgentBase_Annotation drop constraint FK44D5F7D886EFC5D4 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AGENTBASE_ANNOTATION_AUD" not found; SQL statement:
+alter table AgentBase_Annotation_AUD drop constraint FK771279A934869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AGENTBASE_CREDIT" not found; SQL statement:
+alter table AgentBase_Credit drop constraint FK2636742232D1B9F [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AGENTBASE_CREDIT" not found; SQL statement:
+alter table AgentBase_Credit drop constraint FK2636742286EFC5D4 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AGENTBASE_CREDIT_AUD" not found; SQL statement:
+alter table AgentBase_Credit_AUD drop constraint FK7FE7C0F334869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AGENTBASE_DEFINEDTERMBASE" not found; SQL statement:
+alter table AgentBase_DefinedTermBase drop constraint FK6665C77DF116FEB0 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AGENTBASE_DEFINEDTERMBASE" not found; SQL statement:
+alter table AgentBase_DefinedTermBase drop constraint FK6665C77D8D9AB196 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AGENTBASE_DEFINEDTERMBASE_AUD" not found; SQL statement:
+alter table AgentBase_DefinedTermBase_AUD drop constraint FKA737EECE34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AGENTBASE_EXTENSION" not found; SQL statement:
+alter table AgentBase_Extension drop constraint FK8E1E5676927DE9DF [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AGENTBASE_EXTENSION" not found; SQL statement:
+alter table AgentBase_Extension drop constraint FK8E1E567686EFC5D4 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AGENTBASE_EXTENSION_AUD" not found; SQL statement:
+alter table AgentBase_Extension_AUD drop constraint FK11AE594734869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AGENTBASE_IDENTIFIER" not found; SQL statement:
+alter table AgentBase_Identifier drop constraint FK410EB952E12073FF [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AGENTBASE_IDENTIFIER" not found; SQL statement:
+alter table AgentBase_Identifier drop constraint FK410EB95286EFC5D4 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AGENTBASE_IDENTIFIER_AUD" not found; SQL statement:
+alter table AgentBase_Identifier_AUD drop constraint FK3DB9EE2334869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AGENTBASE_MARKER" not found; SQL statement:
+alter table AgentBase_Marker drop constraint FK365D5D63777265A1 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AGENTBASE_MARKER" not found; SQL statement:
+alter table AgentBase_Marker drop constraint FK365D5D6386EFC5D4 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AGENTBASE_MARKER_AUD" not found; SQL statement:
+alter table AgentBase_Marker_AUD drop constraint FKE40621B434869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AGENTBASE_MEDIA" not found; SQL statement:
+alter table AgentBase_Media drop constraint FKE8FC5D9BC2C29593 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AGENTBASE_MEDIA" not found; SQL statement:
+alter table AgentBase_Media drop constraint FKE8FC5D9B86EFC5D4 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AGENTBASE_MEDIA_AUD" not found; SQL statement:
+alter table AgentBase_Media_AUD drop constraint FK323A45EC34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AGENTBASE_ORIGINALSOURCEBASE" not found; SQL statement:
+alter table AgentBase_OriginalSourceBase drop constraint FKB482C5E63A6735D9 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AGENTBASE_ORIGINALSOURCEBASE" not found; SQL statement:
+alter table AgentBase_OriginalSourceBase drop constraint FKB482C5E686EFC5D4 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AGENTBASE_ORIGINALSOURCEBASE_AUD" not found; SQL statement:
+alter table AgentBase_OriginalSourceBase_AUD drop constraint FK886D90B734869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AGENTBASE_RIGHTSINFO" not found; SQL statement:
+alter table AgentBase_RightsInfo drop constraint FK4FD6A3CEC13F7B21 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AGENTBASE_RIGHTSINFO" not found; SQL statement:
+alter table AgentBase_RightsInfo drop constraint FK4FD6A3CE86EFC5D4 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AGENTBASE_RIGHTSINFO_AUD" not found; SQL statement:
+alter table AgentBase_RightsInfo_AUD drop constraint FK79503A9F34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AGENTBASE_CONTACT_EMAILADDRESSES" not found; SQL statement:
+alter table AgentBase_contact_emailaddresses drop constraint FK4BD2B08E86EFC5D4 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AGENTBASE_CONTACT_EMAILADDRESSES_AUD" not found; SQL statement:
+alter table AgentBase_contact_emailaddresses_AUD drop constraint FKCAF7E75F34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AGENTBASE_CONTACT_FAXNUMBERS" not found; SQL statement:
+alter table AgentBase_contact_faxnumbers drop constraint FK52E1AD9586EFC5D4 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AGENTBASE_CONTACT_FAXNUMBERS_AUD" not found; SQL statement:
+alter table AgentBase_contact_faxnumbers_AUD drop constraint FK88A308E634869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AGENTBASE_CONTACT_PHONENUMBERS" not found; SQL statement:
+alter table AgentBase_contact_phonenumbers drop constraint FKC171CC2486EFC5D4 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AGENTBASE_CONTACT_PHONENUMBERS_AUD" not found; SQL statement:
+alter table AgentBase_contact_phonenumbers_AUD drop constraint FKDDD347F534869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AGENTBASE_CONTACT_URLS" not found; SQL statement:
+alter table AgentBase_contact_urls drop constraint FK9A9643EC86EFC5D4 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AGENTBASE_CONTACT_URLS_AUD" not found; SQL statement:
+alter table AgentBase_contact_urls_AUD drop constraint FK1CE69BBD34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AMPLIFICATION" not found; SQL statement:
+alter table Amplification drop constraint FK9DA6B4164FF2DB2C [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AMPLIFICATION" not found; SQL statement:
+alter table Amplification drop constraint FK9DA6B416BC5DA539 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AMPLIFICATION" not found; SQL statement:
+alter table Amplification drop constraint FK9DA6B4163DA462D5 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AMPLIFICATION" not found; SQL statement:
+alter table Amplification drop constraint FK9DA6B4166D2CE418 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AMPLIFICATION" not found; SQL statement:
+alter table Amplification drop constraint FK9DA6B4163781DA30 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AMPLIFICATION" not found; SQL statement:
+alter table Amplification drop constraint FK9DA6B416403E17F4 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AMPLIFICATION" not found; SQL statement:
+alter table Amplification drop constraint FK9DA6B416AFCA96F8 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AMPLIFICATION" not found; SQL statement:
+alter table Amplification drop constraint FK9DA6B4161600EAB3 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AMPLIFICATIONRESULT" not found; SQL statement:
+alter table AmplificationResult drop constraint FK484B7FD34FF2DB2C [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AMPLIFICATIONRESULT" not found; SQL statement:
+alter table AmplificationResult drop constraint FK484B7FD3BC5DA539 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AMPLIFICATIONRESULT" not found; SQL statement:
+alter table AmplificationResult drop constraint FK484B7FD3614CEB1F [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AMPLIFICATIONRESULT" not found; SQL statement:
+alter table AmplificationResult drop constraint FK484B7FD3DEC4385F [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AMPLIFICATIONRESULT" not found; SQL statement:
+alter table AmplificationResult drop constraint FK484B7FD3E671A9DF [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AMPLIFICATIONRESULT" not found; SQL statement:
+alter table AmplificationResult drop constraint FK484B7FD3825BDDD3 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AMPLIFICATIONRESULT_AUD" not found; SQL statement:
+alter table AmplificationResult_AUD drop constraint FK343D8C2434869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AMPLIFICATIONRESULT_ANNOTATION" not found; SQL statement:
+alter table AmplificationResult_Annotation drop constraint FKFE4A8B3B1E403E0B [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AMPLIFICATIONRESULT_ANNOTATION" not found; SQL statement:
+alter table AmplificationResult_Annotation drop constraint FKFE4A8B3BD320A65F [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AMPLIFICATIONRESULT_ANNOTATION_AUD" not found; SQL statement:
+alter table AmplificationResult_Annotation_AUD drop constraint FK7378A38C34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AMPLIFICATIONRESULT_MARKER" not found; SQL statement:
+alter table AmplificationResult_Marker drop constraint FK5B911A46777265A1 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AMPLIFICATIONRESULT_MARKER" not found; SQL statement:
+alter table AmplificationResult_Marker drop constraint FK5B911A46D320A65F [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AMPLIFICATIONRESULT_MARKER_AUD" not found; SQL statement:
+alter table AmplificationResult_Marker_AUD drop constraint FK9D7AB51734869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AMPLIFICATION_AUD" not found; SQL statement:
+alter table Amplification_AUD drop constraint FK448EE6E734869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AMPLIFICATION_ANNOTATION" not found; SQL statement:
+alter table Amplification_Annotation drop constraint FK6B251F181E403E0B [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AMPLIFICATION_ANNOTATION" not found; SQL statement:
+alter table Amplification_Annotation drop constraint FK6B251F18614CEB1F [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AMPLIFICATION_ANNOTATION_AUD" not found; SQL statement:
+alter table Amplification_Annotation_AUD drop constraint FK6FC00E934869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AMPLIFICATION_MARKER" not found; SQL statement:
+alter table Amplification_Marker drop constraint FK46E224A3777265A1 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AMPLIFICATION_MARKER" not found; SQL statement:
+alter table Amplification_Marker drop constraint FK46E224A3614CEB1F [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AMPLIFICATION_MARKER_AUD" not found; SQL statement:
+alter table Amplification_Marker_AUD drop constraint FKA5548F434869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "ANNOTATION" not found; SQL statement:
+alter table Annotation drop constraint FK1A21C74F4FF2DB2C [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "ANNOTATION" not found; SQL statement:
+alter table Annotation drop constraint FK1A21C74FBC5DA539 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "ANNOTATION" not found; SQL statement:
+alter table Annotation drop constraint FK1A21C74FE8D36B00 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "ANNOTATION" not found; SQL statement:
+alter table Annotation drop constraint FK1A21C74FDF299D00 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "ANNOTATION" not found; SQL statement:
+alter table Annotation drop constraint FK1A21C74FE7692740 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "ANNOTATION_AUD" not found; SQL statement:
+alter table Annotation_AUD drop constraint FK1A6BB5A034869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "ANNOTATION_ANNOTATION" not found; SQL statement:
+alter table Annotation_Annotation drop constraint FKC99DFE3F1E403E0B [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "ANNOTATION_ANNOTATION" not found; SQL statement:
+alter table Annotation_Annotation drop constraint FKC99DFE3F994CCE20 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "ANNOTATION_ANNOTATION_AUD" not found; SQL statement:
+alter table Annotation_Annotation_AUD drop constraint FKB212F49034869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "ANNOTATION_MARKER" not found; SQL statement:
+alter table Annotation_Marker drop constraint FKB17EAF4A777265A1 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "ANNOTATION_MARKER" not found; SQL statement:
+alter table Annotation_Marker drop constraint FKB17EAF4A994CCE20 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "ANNOTATION_MARKER_AUD" not found; SQL statement:
+alter table Annotation_Marker_AUD drop constraint FK68CE281B34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "CDMMETADATA" not found; SQL statement:
+alter table CdmMetaData drop constraint FK6EA78F7B4FF2DB2C [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "CLASSIFICATION" not found; SQL statement:
+alter table Classification drop constraint FKDB1100064FF2DB2C [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "CLASSIFICATION" not found; SQL statement:
+alter table Classification drop constraint FKDB110006BC5DA539 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "CLASSIFICATION" not found; SQL statement:
+alter table Classification drop constraint FKDB11000677E2F09E [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "CLASSIFICATION" not found; SQL statement:
+alter table Classification drop constraint FKDB1100068D0FB4DA [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "CLASSIFICATION" not found; SQL statement:
+alter table Classification drop constraint FKDB110006D1E08681 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "CLASSIFICATION_AUD" not found; SQL statement:
+alter table Classification_AUD drop constraint FKEB11BAD734869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "CLASSIFICATION_ANNOTATION" not found; SQL statement:
+alter table Classification_Annotation drop constraint FKC978FD281E403E0B [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "CLASSIFICATION_ANNOTATION" not found; SQL statement:
+alter table Classification_Annotation drop constraint FKC978FD2884A3CE1B [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "CLASSIFICATION_ANNOTATION_AUD" not found; SQL statement:
+alter table Classification_Annotation_AUD drop constraint FK3D1256F934869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "CLASSIFICATION_CREDIT" not found; SQL statement:
+alter table Classification_Credit drop constraint FK4950A17232D1B9F [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "CLASSIFICATION_CREDIT" not found; SQL statement:
+alter table Classification_Credit drop constraint FK4950A17284A3CE1B [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "CLASSIFICATION_CREDIT_AUD" not found; SQL statement:
+alter table Classification_Credit_AUD drop constraint FK48AC64334869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "CLASSIFICATION_DESCRIPTION" not found; SQL statement:
+alter table Classification_Description drop constraint FK382EB1232BEBA58D [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "CLASSIFICATION_DESCRIPTION" not found; SQL statement:
+alter table Classification_Description drop constraint FK382EB12328459272 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "CLASSIFICATION_DESCRIPTION" not found; SQL statement:
+alter table Classification_Description drop constraint FK382EB12384A3CE1B [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "CLASSIFICATION_DESCRIPTION_AUD" not found; SQL statement:
+alter table Classification_Description_AUD drop constraint FK3187957434869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "CLASSIFICATION_EXTENSION" not found; SQL statement:
+alter table Classification_Extension drop constraint FK715D6726927DE9DF [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "CLASSIFICATION_EXTENSION" not found; SQL statement:
+alter table Classification_Extension drop constraint FK715D672684A3CE1B [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "CLASSIFICATION_EXTENSION_AUD" not found; SQL statement:
+alter table Classification_Extension_AUD drop constraint FK289591F734869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "CLASSIFICATION_GEOSCOPE" not found; SQL statement:
+alter table Classification_GeoScope drop constraint FK379FE5BC86D04E74 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "CLASSIFICATION_GEOSCOPE" not found; SQL statement:
+alter table Classification_GeoScope drop constraint FK379FE5BC84A3CE1B [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "CLASSIFICATION_GEOSCOPE_AUD" not found; SQL statement:
+alter table Classification_GeoScope_AUD drop constraint FKF5AAD58D34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "CLASSIFICATION_IDENTIFIER" not found; SQL statement:
+alter table Classification_Identifier drop constraint FKC5B1BEA2E12073FF [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "CLASSIFICATION_IDENTIFIER" not found; SQL statement:
+alter table Classification_Identifier drop constraint FKC5B1BEA284A3CE1B [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "CLASSIFICATION_IDENTIFIER_AUD" not found; SQL statement:
+alter table Classification_Identifier_AUD drop constraint FK3B9CB7334869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "CLASSIFICATION_MARKER" not found; SQL statement:
+alter table Classification_Marker drop constraint FK59778AB3777265A1 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "CLASSIFICATION_MARKER" not found; SQL statement:
+alter table Classification_Marker drop constraint FK59778AB384A3CE1B [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "CLASSIFICATION_MARKER_AUD" not found; SQL statement:
+alter table Classification_Marker_AUD drop constraint FK68A9270434869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "CLASSIFICATION_ORIGINALSOURCEBASE" not found; SQL statement:
+alter table Classification_OriginalSourceBase drop constraint FK91B37B363A6735D9 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "CLASSIFICATION_ORIGINALSOURCEBASE" not found; SQL statement:
+alter table Classification_OriginalSourceBase drop constraint FK91B37B3684A3CE1B [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "CLASSIFICATION_ORIGINALSOURCEBASE_AUD" not found; SQL statement:
+alter table Classification_OriginalSourceBase_AUD drop constraint FK48A31E0734869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "CLASSIFICATION_RIGHTSINFO" not found; SQL statement:
+alter table Classification_RightsInfo drop constraint FKD479A91EC13F7B21 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "CLASSIFICATION_RIGHTSINFO" not found; SQL statement:
+alter table Classification_RightsInfo drop constraint FKD479A91E84A3CE1B [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "CLASSIFICATION_RIGHTSINFO_AUD" not found; SQL statement:
+alter table Classification_RightsInfo_AUD drop constraint FK3F5017EF34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "COLLECTION" not found; SQL statement:
+alter table Collection drop constraint FKF078ABE4FF2DB2C [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "COLLECTION" not found; SQL statement:
+alter table Collection drop constraint FKF078ABEBC5DA539 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "COLLECTION" not found; SQL statement:
+alter table Collection drop constraint FKF078ABE16B9CA77 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "COLLECTION" not found; SQL statement:
+alter table Collection drop constraint FKF078ABECEB38EFF [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "COLLECTION_AUD" not found; SQL statement:
+alter table Collection_AUD drop constraint FKD6D4298F34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "COLLECTION_ANNOTATION" not found; SQL statement:
+alter table Collection_Annotation drop constraint FKEA970F701E403E0B [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "COLLECTION_ANNOTATION" not found; SQL statement:
+alter table Collection_Annotation drop constraint FKEA970F70EB62BE9A [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "COLLECTION_ANNOTATION_AUD" not found; SQL statement:
+alter table Collection_Annotation_AUD drop constraint FKA0CE054134869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "COLLECTION_CREDIT" not found; SQL statement:
+alter table Collection_Credit drop constraint FKE0A317BA32D1B9F [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "COLLECTION_CREDIT" not found; SQL statement:
+alter table Collection_Credit drop constraint FKE0A317BAEB62BE9A [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "COLLECTION_CREDIT_AUD" not found; SQL statement:
+alter table Collection_Credit_AUD drop constraint FK25A8D88B34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "COLLECTION_EXTENSION" not found; SQL statement:
+alter table Collection_Extension drop constraint FKF68FEBDE927DE9DF [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "COLLECTION_EXTENSION" not found; SQL statement:
+alter table Collection_Extension drop constraint FKF68FEBDEEB62BE9A [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "COLLECTION_EXTENSION_AUD" not found; SQL statement:
+alter table Collection_Extension_AUD drop constraint FK1306FAAF34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "COLLECTION_IDENTIFIER" not found; SQL statement:
+alter table Collection_Identifier drop constraint FKE6CFD0EAE12073FF [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "COLLECTION_IDENTIFIER" not found; SQL statement:
+alter table Collection_Identifier drop constraint FKE6CFD0EAEB62BE9A [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "COLLECTION_IDENTIFIER_AUD" not found; SQL statement:
+alter table Collection_Identifier_AUD drop constraint FK677579BB34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "COLLECTION_MARKER" not found; SQL statement:
+alter table Collection_Marker drop constraint FKF0CA00FB777265A1 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "COLLECTION_MARKER" not found; SQL statement:
+alter table Collection_Marker drop constraint FKF0CA00FBEB62BE9A [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "COLLECTION_MARKER_AUD" not found; SQL statement:
+alter table Collection_Marker_AUD drop constraint FK89C7394C34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "COLLECTION_MEDIA" not found; SQL statement:
+alter table Collection_Media drop constraint FK7320E703C2C29593 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "COLLECTION_MEDIA" not found; SQL statement:
+alter table Collection_Media drop constraint FK7320E703EB62BE9A [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "COLLECTION_MEDIA_AUD" not found; SQL statement:
+alter table Collection_Media_AUD drop constraint FK9AABDB5434869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "COLLECTION_ORIGINALSOURCEBASE" not found; SQL statement:
+alter table Collection_OriginalSourceBase drop constraint FK37DEC57E3A6735D9 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "COLLECTION_ORIGINALSOURCEBASE" not found; SQL statement:
+alter table Collection_OriginalSourceBase drop constraint FK37DEC57EEB62BE9A [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "COLLECTION_ORIGINALSOURCEBASE_AUD" not found; SQL statement:
+alter table Collection_OriginalSourceBase_AUD drop constraint FKF810044F34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "COLLECTION_RIGHTSINFO" not found; SQL statement:
+alter table Collection_RightsInfo drop constraint FKF597BB66C13F7B21 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "COLLECTION_RIGHTSINFO" not found; SQL statement:
+alter table Collection_RightsInfo drop constraint FKF597BB66EB62BE9A [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "COLLECTION_RIGHTSINFO_AUD" not found; SQL statement:
+alter table Collection_RightsInfo_AUD drop constraint FKA30BC63734869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "CREDIT" not found; SQL statement:
+alter table Credit drop constraint FK78CA97194FF2DB2C [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "CREDIT" not found; SQL statement:
+alter table Credit drop constraint FK78CA9719BC5DA539 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "CREDIT" not found; SQL statement:
+alter table Credit drop constraint FK78CA9719E8D36B00 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "CREDIT" not found; SQL statement:
+alter table Credit drop constraint FK78CA9719F7976FC5 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "CREDIT_AUD" not found; SQL statement:
+alter table Credit_AUD drop constraint FK5533906A34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "CREDIT_ANNOTATION" not found; SQL statement:
+alter table Credit_Annotation drop constraint FKE8DA4C351E403E0B [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "CREDIT_ANNOTATION" not found; SQL statement:
+alter table Credit_Annotation drop constraint FKE8DA4C354CF694E0 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "CREDIT_ANNOTATION_AUD" not found; SQL statement:
+alter table Credit_Annotation_AUD drop constraint FK1DEB578634869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "CREDIT_MARKER" not found; SQL statement:
+alter table Credit_Marker drop constraint FK10CC6840777265A1 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "CREDIT_MARKER" not found; SQL statement:
+alter table Credit_Marker drop constraint FK10CC68404CF694E0 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "CREDIT_MARKER_AUD" not found; SQL statement:
+alter table Credit_Marker_AUD drop constraint FK880A761134869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DEFINEDTERMBASE" not found; SQL statement:
+alter table DefinedTermBase drop constraint FK2E340A664FF2DB2C [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DEFINEDTERMBASE" not found; SQL statement:
+alter table DefinedTermBase drop constraint FK2E340A66BC5DA539 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DEFINEDTERMBASE" not found; SQL statement:
+alter table DefinedTermBase drop constraint FK2E340A663B0DA0EF [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DEFINEDTERMBASE" not found; SQL statement:
+alter table DefinedTermBase drop constraint FK2E340A66D040DBF0 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DEFINEDTERMBASE" not found; SQL statement:
+alter table DefinedTermBase drop constraint FK2E340A6647AF954C [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DEFINEDTERMBASE" not found; SQL statement:
+alter table DefinedTermBase drop constraint FK2E340A6624AF3F70 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DEFINEDTERMBASE" not found; SQL statement:
+alter table DefinedTermBase drop constraint FK2E340A6636C6F6F6 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DEFINEDTERMBASE" not found; SQL statement:
+alter table DefinedTermBase drop constraint FK2E340A66CC0240B6 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DEFINEDTERMBASE" not found; SQL statement:
+alter table DefinedTermBase drop constraint FK2E340A6688206484 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DEFINEDTERMBASE_AUD" not found; SQL statement:
+alter table DefinedTermBase_AUD drop constraint FK86E8953734869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DEFINEDTERMBASE_ANNOTATION" not found; SQL statement:
+alter table DefinedTermBase_Annotation drop constraint FK589B6C81E403E0B [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DEFINEDTERMBASE_ANNOTATION" not found; SQL statement:
+alter table DefinedTermBase_Annotation drop constraint FK589B6C8C0DB4934 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DEFINEDTERMBASE_ANNOTATION_AUD" not found; SQL statement:
+alter table DefinedTermBase_Annotation_AUD drop constraint FK28ED409934869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DEFINEDTERMBASE_CONTINENT" not found; SQL statement:
+alter table DefinedTermBase_Continent drop constraint FK45F60AFB9AEE7205 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DEFINEDTERMBASE_CONTINENT" not found; SQL statement:
+alter table DefinedTermBase_Continent drop constraint FK45F60AFB901A60CE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DEFINEDTERMBASE_CONTINENT_AUD" not found; SQL statement:
+alter table DefinedTermBase_Continent_AUD drop constraint FKF5DE434C34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DEFINEDTERMBASE_COUNTRY" not found; SQL statement:
+alter table DefinedTermBase_Country drop constraint FKA2ADDA9D47CE41A0 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DEFINEDTERMBASE_COUNTRY" not found; SQL statement:
+alter table DefinedTermBase_Country drop constraint FKA2ADDA9DCE5C0F9E [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DEFINEDTERMBASE_COUNTRY_AUD" not found; SQL statement:
+alter table DefinedTermBase_Country_AUD drop constraint FK8D0171EE34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DEFINEDTERMBASE_CREDIT" not found; SQL statement:
+alter table DefinedTermBase_Credit drop constraint FK78FF2B1232D1B9F [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DEFINEDTERMBASE_CREDIT" not found; SQL statement:
+alter table DefinedTermBase_Credit drop constraint FK78FF2B12C0DB4934 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DEFINEDTERMBASE_CREDIT_AUD" not found; SQL statement:
+alter table DefinedTermBase_Credit_AUD drop constraint FK409B7FE334869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DEFINEDTERMBASE_EXTENSION" not found; SQL statement:
+alter table DefinedTermBase_Extension drop constraint FK397EF986927DE9DF [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DEFINEDTERMBASE_EXTENSION" not found; SQL statement:
+alter table DefinedTermBase_Extension drop constraint FK397EF986C0DB4934 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DEFINEDTERMBASE_EXTENSION_AUD" not found; SQL statement:
+alter table DefinedTermBase_Extension_AUD drop constraint FK6E6F45734869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DEFINEDTERMBASE_IDENTIFIER" not found; SQL statement:
+alter table DefinedTermBase_Identifier drop constraint FK1C27842E12073FF [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DEFINEDTERMBASE_IDENTIFIER" not found; SQL statement:
+alter table DefinedTermBase_Identifier drop constraint FK1C27842C0DB4934 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DEFINEDTERMBASE_IDENTIFIER_AUD" not found; SQL statement:
+alter table DefinedTermBase_Identifier_AUD drop constraint FKEF94B51334869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DEFINEDTERMBASE_MARKER" not found; SQL statement:
+alter table DefinedTermBase_Marker drop constraint FK89261453777265A1 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DEFINEDTERMBASE_MARKER" not found; SQL statement:
+alter table DefinedTermBase_Marker drop constraint FK89261453C0DB4934 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DEFINEDTERMBASE_MARKER_AUD" not found; SQL statement:
+alter table DefinedTermBase_Marker_AUD drop constraint FKA4B9E0A434869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DEFINEDTERMBASE_MEASUREMENTUNIT" not found; SQL statement:
+alter table DefinedTermBase_MeasurementUnit drop constraint FKE9D17767F3BB39BD [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DEFINEDTERMBASE_MEASUREMENTUNIT" not found; SQL statement:
+alter table DefinedTermBase_MeasurementUnit drop constraint FKE9D17767D0BDAE9B [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DEFINEDTERMBASE_MEASUREMENTUNIT_AUD" not found; SQL statement:
+alter table DefinedTermBase_MeasurementUnit_AUD drop constraint FK2C1599B834869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DEFINEDTERMBASE_MEDIA" not found; SQL statement:
+alter table DefinedTermBase_Media drop constraint FK6FC908ABC2C29593 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DEFINEDTERMBASE_MEDIA" not found; SQL statement:
+alter table DefinedTermBase_Media drop constraint FK6FC908ABC0DB4934 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DEFINEDTERMBASE_MEDIA_AUD" not found; SQL statement:
+alter table DefinedTermBase_Media_AUD drop constraint FKDD9AE8FC34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DEFINEDTERMBASE_ORIGINALSOURCEBASE" not found; SQL statement:
+alter table DefinedTermBase_OriginalSourceBase drop constraint FKDCC094D63A6735D9 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DEFINEDTERMBASE_ORIGINALSOURCEBASE" not found; SQL statement:
+alter table DefinedTermBase_OriginalSourceBase drop constraint FKDCC094D6C0DB4934 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DEFINEDTERMBASE_ORIGINALSOURCEBASE_AUD" not found; SQL statement:
+alter table DefinedTermBase_OriginalSourceBase_AUD drop constraint FKAE4A67A734869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DEFINEDTERMBASE_RECOMMENDEDMODIFIERENUMERATION" not found; SQL statement:
+alter table DefinedTermBase_RecommendedModifierEnumeration drop constraint FKA72FB5AE5255EAFD [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DEFINEDTERMBASE_RECOMMENDEDMODIFIERENUMERATION" not found; SQL statement:
+alter table DefinedTermBase_RecommendedModifierEnumeration drop constraint FKA72FB5AED0BDAE9B [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DEFINEDTERMBASE_RECOMMENDEDMODIFIERENUMERATION_AUD" not found; SQL statement:
+alter table DefinedTermBase_RecommendedModifierEnumeration_AUD drop constraint FK780D5C7F34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DEFINEDTERMBASE_REPRESENTATION" not found; SQL statement:
+alter table DefinedTermBase_Representation drop constraint FKAAC8AFE6B31C4747 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DEFINEDTERMBASE_REPRESENTATION" not found; SQL statement:
+alter table DefinedTermBase_Representation drop constraint FKAAC8AFE6C0DB4934 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DEFINEDTERMBASE_REPRESENTATION_AUD" not found; SQL statement:
+alter table DefinedTermBase_Representation_AUD drop constraint FKB5AE7AB734869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DEFINEDTERMBASE_RIGHTSINFO" not found; SQL statement:
+alter table DefinedTermBase_RightsInfo drop constraint FK108A62BEC13F7B21 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DEFINEDTERMBASE_RIGHTSINFO" not found; SQL statement:
+alter table DefinedTermBase_RightsInfo drop constraint FK108A62BEC0DB4934 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DEFINEDTERMBASE_RIGHTSINFO_AUD" not found; SQL statement:
+alter table DefinedTermBase_RightsInfo_AUD drop constraint FK2B2B018F34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DEFINEDTERMBASE_STATISTICALMEASURE" not found; SQL statement:
+alter table DefinedTermBase_StatisticalMeasure drop constraint FK6FF15DFCC9CD5B57 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DEFINEDTERMBASE_STATISTICALMEASURE" not found; SQL statement:
+alter table DefinedTermBase_StatisticalMeasure drop constraint FK6FF15DFCD0BDAE9B [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DEFINEDTERMBASE_STATISTICALMEASURE_AUD" not found; SQL statement:
+alter table DefinedTermBase_StatisticalMeasure_AUD drop constraint FK3C062DCD34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DEFINEDTERMBASE_SUPPORTEDCATEGORICALENUMERATION" not found; SQL statement:
+alter table DefinedTermBase_SupportedCategoricalEnumeration drop constraint FK2170B25C5AF2C74 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DEFINEDTERMBASE_SUPPORTEDCATEGORICALENUMERATION" not found; SQL statement:
+alter table DefinedTermBase_SupportedCategoricalEnumeration drop constraint FK2170B25CD0BDAE9B [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DEFINEDTERMBASE_SUPPORTEDCATEGORICALENUMERATION_AUD" not found; SQL statement:
+alter table DefinedTermBase_SupportedCategoricalEnumeration_AUD drop constraint FKBB04522D34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DERIVATIONEVENT" not found; SQL statement:
+alter table DerivationEvent drop constraint FK426BC034FF2DB2C [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DERIVATIONEVENT" not found; SQL statement:
+alter table DerivationEvent drop constraint FK426BC03BC5DA539 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DERIVATIONEVENT" not found; SQL statement:
+alter table DerivationEvent drop constraint FK426BC033DA462D5 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DERIVATIONEVENT" not found; SQL statement:
+alter table DerivationEvent drop constraint FK426BC03403E17F4 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DERIVATIONEVENT" not found; SQL statement:
+alter table DerivationEvent drop constraint FK426BC038524B89D [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DERIVATIONEVENT_AUD" not found; SQL statement:
+alter table DerivationEvent_AUD drop constraint FKDABF305434869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DERIVATIONEVENT_ANNOTATION" not found; SQL statement:
+alter table DerivationEvent_Annotation drop constraint FKEFA0D10B1E403E0B [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DERIVATIONEVENT_ANNOTATION" not found; SQL statement:
+alter table DerivationEvent_Annotation drop constraint FKEFA0D10B4AAB411A [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DERIVATIONEVENT_ANNOTATION_AUD" not found; SQL statement:
+alter table DerivationEvent_Annotation_AUD drop constraint FKA197815C34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DERIVATIONEVENT_MARKER" not found; SQL statement:
+alter table DerivationEvent_Marker drop constraint FKE412C816777265A1 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DERIVATIONEVENT_MARKER" not found; SQL statement:
+alter table DerivationEvent_Marker drop constraint FKE412C8164AAB411A [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DERIVATIONEVENT_MARKER_AUD" not found; SQL statement:
+alter table DerivationEvent_Marker_AUD drop constraint FK8ED0FAE734869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DESCRIPTIONBASE" not found; SQL statement:
+alter table DescriptionBase drop constraint FKFF4D58CD4FF2DB2C [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DESCRIPTIONBASE" not found; SQL statement:
+alter table DescriptionBase drop constraint FKFF4D58CDBC5DA539 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DESCRIPTIONBASE" not found; SQL statement:
+alter table DescriptionBase drop constraint FKFF4D58CDB56856A4 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DESCRIPTIONBASE" not found; SQL statement:
+alter table DescriptionBase drop constraint FKFF4D58CDDE9A3E39 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DESCRIPTIONBASE" not found; SQL statement:
+alter table DescriptionBase drop constraint FKFF4D58CDDA935185 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DESCRIPTIONBASE_AUD" not found; SQL statement:
+alter table DescriptionBase_AUD drop constraint FK7456581E34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DESCRIPTIONBASE_ANNOTATION" not found; SQL statement:
+alter table DescriptionBase_Annotation drop constraint FKF3AD32011E403E0B [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DESCRIPTIONBASE_ANNOTATION" not found; SQL statement:
+alter table DescriptionBase_Annotation drop constraint FKF3AD3201F1DDBFAB [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DESCRIPTIONBASE_ANNOTATION_AUD" not found; SQL statement:
+alter table DescriptionBase_Annotation_AUD drop constraint FK15FE775234869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DESCRIPTIONBASE_CREDIT" not found; SQL statement:
+alter table DescriptionBase_Credit drop constraint FK510B2ACB32D1B9F [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DESCRIPTIONBASE_CREDIT" not found; SQL statement:
+alter table DescriptionBase_Credit drop constraint FK510B2ACBF1DDBFAB [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DESCRIPTIONBASE_CREDIT_AUD" not found; SQL statement:
+alter table DescriptionBase_Credit_AUD drop constraint FK2EBEFB1C34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DESCRIPTIONBASE_EXTENSION" not found; SQL statement:
+alter table DescriptionBase_Extension drop constraint FKD5D2B32D927DE9DF [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DESCRIPTIONBASE_EXTENSION" not found; SQL statement:
+alter table DescriptionBase_Extension drop constraint FKD5D2B32DF1DDBFAB [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DESCRIPTIONBASE_EXTENSION_AUD" not found; SQL statement:
+alter table DescriptionBase_Extension_AUD drop constraint FK79E7827E34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DESCRIPTIONBASE_GEOSCOPE" not found; SQL statement:
+alter table DescriptionBase_GeoScope drop constraint FK3ADD7CD586D04E74 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DESCRIPTIONBASE_GEOSCOPE" not found; SQL statement:
+alter table DescriptionBase_GeoScope drop constraint FK3ADD7CD5D86445CE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DESCRIPTIONBASE_GEOSCOPE_AUD" not found; SQL statement:
+alter table DescriptionBase_GeoScope_AUD drop constraint FK63A5382634869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DESCRIPTIONBASE_IDENTIFIER" not found; SQL statement:
+alter table DescriptionBase_Identifier drop constraint FKEFE5F37BE12073FF [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DESCRIPTIONBASE_IDENTIFIER" not found; SQL statement:
+alter table DescriptionBase_Identifier drop constraint FKEFE5F37BF1DDBFAB [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DESCRIPTIONBASE_IDENTIFIER_AUD" not found; SQL statement:
+alter table DescriptionBase_Identifier_AUD drop constraint FKDCA5EBCC34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DESCRIPTIONBASE_MARKER" not found; SQL statement:
+alter table DescriptionBase_Marker drop constraint FK6132140C777265A1 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DESCRIPTIONBASE_MARKER" not found; SQL statement:
+alter table DescriptionBase_Marker drop constraint FK6132140CF1DDBFAB [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DESCRIPTIONBASE_MARKER_AUD" not found; SQL statement:
+alter table DescriptionBase_Marker_AUD drop constraint FK92DD5BDD34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DESCRIPTIONBASE_ORIGINALSOURCEBASE" not found; SQL statement:
+alter table DescriptionBase_OriginalSourceBase drop constraint FKDC75C70F3A6735D9 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DESCRIPTIONBASE_ORIGINALSOURCEBASE" not found; SQL statement:
+alter table DescriptionBase_OriginalSourceBase drop constraint FKDC75C70FF1DDBFAB [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DESCRIPTIONBASE_ORIGINALSOURCEBASE_AUD" not found; SQL statement:
+alter table DescriptionBase_OriginalSourceBase_AUD drop constraint FK8F39D56034869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DESCRIPTIONBASE_REFERENCE" not found; SQL statement:
+alter table DescriptionBase_Reference drop constraint FKC330D6395C601E49 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DESCRIPTIONBASE_REFERENCE" not found; SQL statement:
+alter table DescriptionBase_Reference drop constraint FKC330D639F1DDBFAB [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DESCRIPTIONBASE_REFERENCE_AUD" not found; SQL statement:
+alter table DescriptionBase_Reference_AUD drop constraint FK76253F8A34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DESCRIPTIONBASE_RIGHTSINFO" not found; SQL statement:
+alter table DescriptionBase_RightsInfo drop constraint FKFEADDDF7C13F7B21 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DESCRIPTIONBASE_RIGHTSINFO" not found; SQL statement:
+alter table DescriptionBase_RightsInfo drop constraint FKFEADDDF7F1DDBFAB [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DESCRIPTIONBASE_RIGHTSINFO_AUD" not found; SQL statement:
+alter table DescriptionBase_RightsInfo_AUD drop constraint FK183C384834869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DESCRIPTIONBASE_SCOPE" not found; SQL statement:
+alter table DescriptionBase_Scope drop constraint FKB9257C4294E290CA [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DESCRIPTIONBASE_SCOPE" not found; SQL statement:
+alter table DescriptionBase_Scope drop constraint FKB9257C42D86445CE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DESCRIPTIONBASE_SCOPE_AUD" not found; SQL statement:
+alter table DescriptionBase_Scope_AUD drop constraint FK75D5B91334869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DESCRIPTIONELEMENTBASE" not found; SQL statement:
+alter table DescriptionElementBase drop constraint FK38FE76714FF2DB2C [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DESCRIPTIONELEMENTBASE" not found; SQL statement:
+alter table DescriptionElementBase drop constraint FK38FE7671BC5DA539 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DESCRIPTIONELEMENTBASE" not found; SQL statement:
+alter table DescriptionElementBase drop constraint FK38FE76714220AFEB [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DESCRIPTIONELEMENTBASE" not found; SQL statement:
+alter table DescriptionElementBase drop constraint FK38FE767134AF0E81 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DESCRIPTIONELEMENTBASE" not found; SQL statement:
+alter table DescriptionElementBase drop constraint FK38FE76711C3C3FF7 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DESCRIPTIONELEMENTBASE" not found; SQL statement:
+alter table DescriptionElementBase drop constraint FK38FE7671E8D36B00 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DESCRIPTIONELEMENTBASE" not found; SQL statement:
+alter table DescriptionElementBase drop constraint FK38FE7671693C1147 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DESCRIPTIONELEMENTBASE" not found; SQL statement:
+alter table DescriptionElementBase drop constraint FK38FE76716561D9B1 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DESCRIPTIONELEMENTBASE" not found; SQL statement:
+alter table DescriptionElementBase drop constraint FK38FE767110A80E07 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DESCRIPTIONELEMENTBASE" not found; SQL statement:
+alter table DescriptionElementBase drop constraint FK38FE76719108D9B [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DESCRIPTIONELEMENTBASE" not found; SQL statement:
+alter table DescriptionElementBase drop constraint FK38FE76716D0D7A56 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DESCRIPTIONELEMENTBASE_AUD" not found; SQL statement:
+alter table DescriptionElementBase_AUD drop constraint FKF3803C234869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DESCRIPTIONELEMENTBASE_ANNOTATION" not found; SQL statement:
+alter table DescriptionElementBase_Annotation drop constraint FK7EE5E5DD1E403E0B [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DESCRIPTIONELEMENTBASE_ANNOTATION" not found; SQL statement:
+alter table DescriptionElementBase_Annotation drop constraint FK7EE5E5DD3B8BB609 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DESCRIPTIONELEMENTBASE_ANNOTATION_AUD" not found; SQL statement:
+alter table DescriptionElementBase_Annotation_AUD drop constraint FK2BC1DD2E34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DESCRIPTIONELEMENTBASE_LANGUAGESTRING" not found; SQL statement:
+alter table DescriptionElementBase_LanguageString drop constraint FKC753F137ACF5F60B [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DESCRIPTIONELEMENTBASE_LANGUAGESTRING" not found; SQL statement:
+alter table DescriptionElementBase_LanguageString drop constraint FKC753F137C6D55834 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DESCRIPTIONELEMENTBASE_LANGUAGESTRING" not found; SQL statement:
+alter table DescriptionElementBase_LanguageString drop constraint FKC753F137C086B46F [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DESCRIPTIONELEMENTBASE_LANGUAGESTRING_AUD" not found; SQL statement:
+alter table DescriptionElementBase_LanguageString_AUD drop constraint FK2D26AB8834869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DESCRIPTIONELEMENTBASE_MARKER" not found; SQL statement:
+alter table DescriptionElementBase_Marker drop constraint FK1CB715E8777265A1 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DESCRIPTIONELEMENTBASE_MARKER" not found; SQL statement:
+alter table DescriptionElementBase_Marker drop constraint FK1CB715E83B8BB609 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DESCRIPTIONELEMENTBASE_MARKER_AUD" not found; SQL statement:
+alter table DescriptionElementBase_Marker_AUD drop constraint FK1E160FB934869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DESCRIPTIONELEMENTBASE_MEDIA" not found; SQL statement:
+alter table DescriptionElementBase_Media drop constraint FK21F70076C2C29593 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DESCRIPTIONELEMENTBASE_MEDIA" not found; SQL statement:
+alter table DescriptionElementBase_Media drop constraint FK21F700763B8BB609 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DESCRIPTIONELEMENTBASE_MEDIA_AUD" not found; SQL statement:
+alter table DescriptionElementBase_Media_AUD drop constraint FK5522034734869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DESCRIPTIONELEMENTBASE_MODIFIER" not found; SQL statement:
+alter table DescriptionElementBase_Modifier drop constraint FK97E0D105F4E35BCD [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DESCRIPTIONELEMENTBASE_MODIFIER" not found; SQL statement:
+alter table DescriptionElementBase_Modifier drop constraint FK97E0D1053B8BB609 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DESCRIPTIONELEMENTBASE_MODIFIER_AUD" not found; SQL statement:
+alter table DescriptionElementBase_Modifier_AUD drop constraint FK2982F45634869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DESCRIPTIONELEMENTBASE_MODIFYINGTEXT" not found; SQL statement:
+alter table DescriptionElementBase_ModifyingText drop constraint FK522D90C7F05D08D4 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DESCRIPTIONELEMENTBASE_MODIFYINGTEXT" not found; SQL statement:
+alter table DescriptionElementBase_ModifyingText drop constraint FK522D90C79682414B [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DESCRIPTIONELEMENTBASE_MODIFYINGTEXT" not found; SQL statement:
+alter table DescriptionElementBase_ModifyingText drop constraint FK522D90C73B8BB609 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DESCRIPTIONELEMENTBASE_MODIFYINGTEXT_AUD" not found; SQL statement:
+alter table DescriptionElementBase_ModifyingText_AUD drop constraint FK6C06031834869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DESCRIPTIONELEMENTBASE_ORIGINALSOURCEBASE" not found; SQL statement:
+alter table DescriptionElementBase_OriginalSourceBase drop constraint FKF41ADEEBA6473CCC [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DESCRIPTIONELEMENTBASE_ORIGINALSOURCEBASE" not found; SQL statement:
+alter table DescriptionElementBase_OriginalSourceBase drop constraint FKF41ADEEB3B8BB609 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DESCRIPTIONELEMENTBASE_ORIGINALSOURCEBASE_AUD" not found; SQL statement:
+alter table DescriptionElementBase_OriginalSourceBase_AUD drop constraint FK9C979F3C34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DETERMINATIONEVENT" not found; SQL statement:
+alter table DeterminationEvent drop constraint FK1DB24974FF2DB2C [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DETERMINATIONEVENT" not found; SQL statement:
+alter table DeterminationEvent drop constraint FK1DB2497BC5DA539 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DETERMINATIONEVENT" not found; SQL statement:
+alter table DeterminationEvent drop constraint FK1DB24973DA462D5 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DETERMINATIONEVENT" not found; SQL statement:
+alter table DeterminationEvent drop constraint FK1DB24974B251DAD [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DETERMINATIONEVENT" not found; SQL statement:
+alter table DeterminationEvent drop constraint FK1DB2497BD54CF92 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DETERMINATIONEVENT" not found; SQL statement:
+alter table DeterminationEvent drop constraint FK1DB2497AEC8CCAA [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DETERMINATIONEVENT" not found; SQL statement:
+alter table DeterminationEvent drop constraint FK1DB2497DA935185 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DETERMINATIONEVENT_AUD" not found; SQL statement:
+alter table DeterminationEvent_AUD drop constraint FKA0252EE834869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DETERMINATIONEVENT_ANNOTATION" not found; SQL statement:
+alter table DeterminationEvent_Annotation drop constraint FKB74F03F71E403E0B [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DETERMINATIONEVENT_ANNOTATION" not found; SQL statement:
+alter table DeterminationEvent_Annotation drop constraint FKB74F03F76BE0BFDA [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DETERMINATIONEVENT_ANNOTATION_AUD" not found; SQL statement:
+alter table DeterminationEvent_Annotation_AUD drop constraint FKAFDA5E4834869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DETERMINATIONEVENT_MARKER" not found; SQL statement:
+alter table DeterminationEvent_Marker drop constraint FK5C475102777265A1 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DETERMINATIONEVENT_MARKER" not found; SQL statement:
+alter table DeterminationEvent_Marker drop constraint FK5C4751026BE0BFDA [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DETERMINATIONEVENT_MARKER_AUD" not found; SQL statement:
+alter table DeterminationEvent_Marker_AUD drop constraint FK567F2DD334869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DETERMINATIONEVENT_REFERENCE" not found; SQL statement:
+alter table DeterminationEvent_Reference drop constraint FK8FB1ED8355A53F64 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DETERMINATIONEVENT_REFERENCE" not found; SQL statement:
+alter table DeterminationEvent_Reference drop constraint FK8FB1ED836BE0BFDA [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DETERMINATIONEVENT_REFERENCE_AUD" not found; SQL statement:
+alter table DeterminationEvent_Reference_AUD drop constraint FK6255A1D434869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DNAQUALITY" not found; SQL statement:
+alter table DnaQuality drop constraint FK7F4518084FF2DB2C [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DNAQUALITY" not found; SQL statement:
+alter table DnaQuality drop constraint FK7F451808BC5DA539 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DNAQUALITY" not found; SQL statement:
+alter table DnaQuality drop constraint FK7F45180823A844FA [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DNAQUALITY" not found; SQL statement:
+alter table DnaQuality drop constraint FK7F45180887BB6462 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DNAQUALITY" not found; SQL statement:
+alter table DnaQuality drop constraint FK7F451808632EAD0D [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DNAQUALITY_AUD" not found; SQL statement:
+alter table DnaQuality_AUD drop constraint FKA79601D934869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "ENTITYCONSTRAINTVIOLATION" not found; SQL statement:
+alter table EntityConstraintViolation drop constraint FK8970AEC54FF2DB2C [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "ENTITYCONSTRAINTVIOLATION" not found; SQL statement:
+alter table EntityConstraintViolation drop constraint FK8970AEC57CB10052 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "ENTITYVALIDATION" not found; SQL statement:
+alter table EntityValidation drop constraint FKE5A60CDC4FF2DB2C [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "EXTENSION" not found; SQL statement:
+alter table Extension drop constraint FK52EF3C1F4FF2DB2C [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "EXTENSION" not found; SQL statement:
+alter table Extension drop constraint FK52EF3C1FBC5DA539 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "EXTENSION" not found; SQL statement:
+alter table Extension drop constraint FK52EF3C1FAD392BD3 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "EXTENSION_AUD" not found; SQL statement:
+alter table Extension_AUD drop constraint FK92D2427034869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "FEATURENODE" not found; SQL statement:
+alter table FeatureNode drop constraint FK4CEED9F84FF2DB2C [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "FEATURENODE" not found; SQL statement:
+alter table FeatureNode drop constraint FK4CEED9F8BC5DA539 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "FEATURENODE" not found; SQL statement:
+alter table FeatureNode drop constraint FK4CEED9F84220AFEB [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "FEATURENODE" not found; SQL statement:
+alter table FeatureNode drop constraint FK4CEED9F847C496CB [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "FEATURENODE" not found; SQL statement:
+alter table FeatureNode drop constraint FK4CEED9F8E0AD2C59 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "FEATURENODE_AUD" not found; SQL statement:
+alter table FeatureNode_AUD drop constraint FK25AD4BC934869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "FEATURENODE_DEFINEDTERMBASE_INAPPLICABLEIF" not found; SQL statement:
+alter table FeatureNode_DefinedTermBase_InapplicableIf drop constraint FK56833D011128E63B [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "FEATURENODE_DEFINEDTERMBASE_INAPPLICABLEIF" not found; SQL statement:
+alter table FeatureNode_DefinedTermBase_InapplicableIf drop constraint FK56833D0152FCC4B [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "FEATURENODE_DEFINEDTERMBASE_INAPPLICABLEIF_AUD" not found; SQL statement:
+alter table FeatureNode_DefinedTermBase_InapplicableIf_AUD drop constraint FKB8D7025234869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "FEATURENODE_DEFINEDTERMBASE_ONLYAPPLICABLE" not found; SQL statement:
+alter table FeatureNode_DefinedTermBase_OnlyApplicable drop constraint FK6AE876AB57FA94D4 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "FEATURENODE_DEFINEDTERMBASE_ONLYAPPLICABLE" not found; SQL statement:
+alter table FeatureNode_DefinedTermBase_OnlyApplicable drop constraint FK6AE876AB52FCC4B [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "FEATURENODE_DEFINEDTERMBASE_ONLYAPPLICABLE_AUD" not found; SQL statement:
+alter table FeatureNode_DefinedTermBase_OnlyApplicable_AUD drop constraint FK3F5356FC34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "FEATURETREE" not found; SQL statement:
+alter table FeatureTree drop constraint FK4CF19F944FF2DB2C [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "FEATURETREE" not found; SQL statement:
+alter table FeatureTree drop constraint FK4CF19F94BC5DA539 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "FEATURETREE" not found; SQL statement:
+alter table FeatureTree drop constraint FK4CF19F94B7892921 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "FEATURETREE_AUD" not found; SQL statement:
+alter table FeatureTree_AUD drop constraint FK355BE36534869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "FEATURETREE_ANNOTATION" not found; SQL statement:
+alter table FeatureTree_Annotation drop constraint FK5D8B8DA1E403E0B [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "FEATURETREE_ANNOTATION" not found; SQL statement:
+alter table FeatureTree_Annotation drop constraint FK5D8B8DA47C496CB [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "FEATURETREE_ANNOTATION_AUD" not found; SQL statement:
+alter table FeatureTree_Annotation_AUD drop constraint FK86E8E9AB34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "FEATURETREE_CREDIT" not found; SQL statement:
+alter table FeatureTree_Credit drop constraint FK7536062432D1B9F [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "FEATURETREE_CREDIT" not found; SQL statement:
+alter table FeatureTree_Credit drop constraint FK7536062447C496CB [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "FEATURETREE_CREDIT_AUD" not found; SQL statement:
+alter table FeatureTree_Credit_AUD drop constraint FK40EA81F534869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "FEATURETREE_EXTENSION" not found; SQL statement:
+alter table FeatureTree_Extension drop constraint FKAD1E6D34927DE9DF [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "FEATURETREE_EXTENSION" not found; SQL statement:
+alter table FeatureTree_Extension drop constraint FKAD1E6D3447C496CB [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "FEATURETREE_EXTENSION_AUD" not found; SQL statement:
+alter table FeatureTree_Extension_AUD drop constraint FKF128E10534869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "FEATURETREE_IDENTIFIER" not found; SQL statement:
+alter table FeatureTree_Identifier drop constraint FK2117A54E12073FF [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "FEATURETREE_IDENTIFIER" not found; SQL statement:
+alter table FeatureTree_Identifier drop constraint FK2117A5447C496CB [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "FEATURETREE_IDENTIFIER_AUD" not found; SQL statement:
+alter table FeatureTree_Identifier_AUD drop constraint FK4D905E2534869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "FEATURETREE_MARKER" not found; SQL statement:
+alter table FeatureTree_Marker drop constraint FK855CEF65777265A1 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "FEATURETREE_MARKER" not found; SQL statement:
+alter table FeatureTree_Marker drop constraint FK855CEF6547C496CB [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "FEATURETREE_MARKER_AUD" not found; SQL statement:
+alter table FeatureTree_Marker_AUD drop constraint FKA508E2B634869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "FEATURETREE_ORIGINALSOURCEBASE" not found; SQL statement:
+alter table FeatureTree_OriginalSourceBase drop constraint FK13BD64E83A6735D9 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "FEATURETREE_ORIGINALSOURCEBASE" not found; SQL statement:
+alter table FeatureTree_OriginalSourceBase drop constraint FK13BD64E847C496CB [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "FEATURETREE_ORIGINALSOURCEBASE_AUD" not found; SQL statement:
+alter table FeatureTree_OriginalSourceBase_AUD drop constraint FK7B5CDEB934869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "FEATURETREE_REPRESENTATION" not found; SQL statement:
+alter table FeatureTree_Representation drop constraint FK8C458F8B31C4747 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "FEATURETREE_REPRESENTATION" not found; SQL statement:
+alter table FeatureTree_Representation drop constraint FK8C458F847C496CB [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "FEATURETREE_REPRESENTATION_AUD" not found; SQL statement:
+alter table FeatureTree_Representation_AUD drop constraint FKECAB4AC934869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "FEATURETREE_RIGHTSINFO" not found; SQL statement:
+alter table FeatureTree_RightsInfo drop constraint FK10D964D0C13F7B21 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "FEATURETREE_RIGHTSINFO" not found; SQL statement:
+alter table FeatureTree_RightsInfo drop constraint FK10D964D047C496CB [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "FEATURETREE_RIGHTSINFO_AUD" not found; SQL statement:
+alter table FeatureTree_RightsInfo_AUD drop constraint FK8926AAA134869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "GATHERINGEVENT" not found; SQL statement:
+alter table GatheringEvent drop constraint FK6F1286F34FF2DB2C [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "GATHERINGEVENT" not found; SQL statement:
+alter table GatheringEvent drop constraint FK6F1286F3BC5DA539 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "GATHERINGEVENT" not found; SQL statement:
+alter table GatheringEvent drop constraint FK6F1286F33DA462D5 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "GATHERINGEVENT" not found; SQL statement:
+alter table GatheringEvent drop constraint FK6F1286F3C15704E [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "GATHERINGEVENT" not found; SQL statement:
+alter table GatheringEvent drop constraint FK6F1286F3F55AFD89 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "GATHERINGEVENT" not found; SQL statement:
+alter table GatheringEvent drop constraint FK6F1286F38B455EC6 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "GATHERINGEVENT_AUD" not found; SQL statement:
+alter table GatheringEvent_AUD drop constraint FK3EC034434869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "GATHERINGEVENT_ANNOTATION" not found; SQL statement:
+alter table GatheringEvent_Annotation drop constraint FK76DDD01B1E403E0B [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "GATHERINGEVENT_ANNOTATION" not found; SQL statement:
+alter table GatheringEvent_Annotation drop constraint FK76DDD01BF95F225A [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "GATHERINGEVENT_ANNOTATION_AUD" not found; SQL statement:
+alter table GatheringEvent_Annotation_AUD drop constraint FK351E786C34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "GATHERINGEVENT_DEFINEDTERMBASE" not found; SQL statement:
+alter table GatheringEvent_DefinedTermBase drop constraint FK69D9A11A7C34B6D6 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "GATHERINGEVENT_DEFINEDTERMBASE" not found; SQL statement:
+alter table GatheringEvent_DefinedTermBase drop constraint FK69D9A11AF95F225A [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "GATHERINGEVENT_DEFINEDTERMBASE_AUD" not found; SQL statement:
+alter table GatheringEvent_DefinedTermBase_AUD drop constraint FKB3BBB1EB34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "GATHERINGEVENT_MARKER" not found; SQL statement:
+alter table GatheringEvent_Marker drop constraint FK7B49CF26777265A1 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "GATHERINGEVENT_MARKER" not found; SQL statement:
+alter table GatheringEvent_Marker drop constraint FK7B49CF26F95F225A [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "GATHERINGEVENT_MARKER_AUD" not found; SQL statement:
+alter table GatheringEvent_Marker_AUD drop constraint FK160DF9F734869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "GRANTEDAUTHORITYIMPL" not found; SQL statement:
+alter table GrantedAuthorityImpl drop constraint FKB05CF9284FF2DB2C [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "HOMOTYPICALGROUP" not found; SQL statement:
+alter table HomotypicalGroup drop constraint FK7DECCC184FF2DB2C [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "HOMOTYPICALGROUP" not found; SQL statement:
+alter table HomotypicalGroup drop constraint FK7DECCC18BC5DA539 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "HOMOTYPICALGROUP_AUD" not found; SQL statement:
+alter table HomotypicalGroup_AUD drop constraint FKE4252DE934869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "HOMOTYPICALGROUP_ANNOTATION" not found; SQL statement:
+alter table HomotypicalGroup_Annotation drop constraint FK7A0351D61E403E0B [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "HOMOTYPICALGROUP_ANNOTATION" not found; SQL statement:
+alter table HomotypicalGroup_Annotation drop constraint FK7A0351D6BFEAE500 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "HOMOTYPICALGROUP_ANNOTATION_AUD" not found; SQL statement:
+alter table HomotypicalGroup_Annotation_AUD drop constraint FK41E6A4A734869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "HOMOTYPICALGROUP_MARKER" not found; SQL statement:
+alter table HomotypicalGroup_Marker drop constraint FK97D36661777265A1 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "HOMOTYPICALGROUP_MARKER" not found; SQL statement:
+alter table HomotypicalGroup_Marker drop constraint FK97D36661BFEAE500 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "HOMOTYPICALGROUP_MARKER_AUD" not found; SQL statement:
+alter table HomotypicalGroup_Marker_AUD drop constraint FK19337BB234869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "HYBRIDRELATIONSHIP" not found; SQL statement:
+alter table HybridRelationship drop constraint FK9033CE744FF2DB2C [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "HYBRIDRELATIONSHIP" not found; SQL statement:
+alter table HybridRelationship drop constraint FK9033CE74BC5DA539 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "HYBRIDRELATIONSHIP" not found; SQL statement:
+alter table HybridRelationship drop constraint FK9033CE74AEB7F3BE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "HYBRIDRELATIONSHIP" not found; SQL statement:
+alter table HybridRelationship drop constraint FK9033CE749DD57A93 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "HYBRIDRELATIONSHIP" not found; SQL statement:
+alter table HybridRelationship drop constraint FK9033CE74AF4F9F62 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "HYBRIDRELATIONSHIP" not found; SQL statement:
+alter table HybridRelationship drop constraint FK9033CE7455F241D4 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "HYBRIDRELATIONSHIP_AUD" not found; SQL statement:
+alter table HybridRelationship_AUD drop constraint FK9C2BA24534869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "HYBRIDRELATIONSHIP_ANNOTATION" not found; SQL statement:
+alter table HybridRelationship_Annotation drop constraint FK2C7E7DFA1E403E0B [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "HYBRIDRELATIONSHIP_ANNOTATION" not found; SQL statement:
+alter table HybridRelationship_Annotation drop constraint FK2C7E7DFA59832240 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "HYBRIDRELATIONSHIP_ANNOTATION_AUD" not found; SQL statement:
+alter table HybridRelationship_Annotation_AUD drop constraint FKACE71ECB34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "HYBRIDRELATIONSHIP_MARKER" not found; SQL statement:
+alter table HybridRelationship_Marker drop constraint FKCEF24485777265A1 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "HYBRIDRELATIONSHIP_MARKER" not found; SQL statement:
+alter table HybridRelationship_Marker drop constraint FKCEF2448559832240 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "HYBRIDRELATIONSHIP_MARKER_AUD" not found; SQL statement:
+alter table HybridRelationship_Marker_AUD drop constraint FKCBAEA7D634869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "IDENTIFIER" not found; SQL statement:
+alter table Identifier drop constraint FK165A88C94FF2DB2C [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "IDENTIFIER" not found; SQL statement:
+alter table Identifier drop constraint FK165A88C9BC5DA539 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "IDENTIFIER" not found; SQL statement:
+alter table Identifier drop constraint FK165A88C9E67FC44F [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "IDENTIFIER_AUD" not found; SQL statement:
+alter table Identifier_AUD drop constraint FKE1132A1A34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "IDENTIFIER_ANNOTATION" not found; SQL statement:
+alter table Identifier_Annotation drop constraint FK12BB6C851E403E0B [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "IDENTIFIER_ANNOTATION" not found; SQL statement:
+alter table Identifier_Annotation drop constraint FK12BB6C85E640A3E0 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "IDENTIFIER_ANNOTATION_AUD" not found; SQL statement:
+alter table Identifier_Annotation_AUD drop constraint FK36A3CFD634869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "IDENTIFIER_MARKER" not found; SQL statement:
+alter table Identifier_Marker drop constraint FK4A6A3090777265A1 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "IDENTIFIER_MARKER" not found; SQL statement:
+alter table Identifier_Marker drop constraint FK4A6A3090E640A3E0 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "IDENTIFIER_MARKER_AUD" not found; SQL statement:
+alter table Identifier_Marker_AUD drop constraint FKB1EB966134869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "INDIVIDUALASSOCIATION_LANGUAGESTRING" not found; SQL statement:
+alter table IndividualAssociation_LanguageString drop constraint FKB5C75EC02BEBA58D [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "INDIVIDUALASSOCIATION_LANGUAGESTRING" not found; SQL statement:
+alter table IndividualAssociation_LanguageString drop constraint FKB5C75EC028459272 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "INDIVIDUALASSOCIATION_LANGUAGESTRING" not found; SQL statement:
+alter table IndividualAssociation_LanguageString drop constraint FKB5C75EC084FF3EDF [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "INDIVIDUALASSOCIATION_LANGUAGESTRING_AUD" not found; SQL statement:
+alter table IndividualAssociation_LanguageString_AUD drop constraint FKB1A62C9134869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "INSTITUTIONALMEMBERSHIP" not found; SQL statement:
+alter table InstitutionalMembership drop constraint FK3C8E1FF94FF2DB2C [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "INSTITUTIONALMEMBERSHIP" not found; SQL statement:
+alter table InstitutionalMembership drop constraint FK3C8E1FF9BC5DA539 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "INSTITUTIONALMEMBERSHIP" not found; SQL statement:
+alter table InstitutionalMembership drop constraint FK3C8E1FF916B9CA77 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "INSTITUTIONALMEMBERSHIP" not found; SQL statement:
+alter table InstitutionalMembership drop constraint FK3C8E1FF9AAC1B820 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "INSTITUTIONALMEMBERSHIP_AUD" not found; SQL statement:
+alter table InstitutionalMembership_AUD drop constraint FK847A94A34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "INTEXTREFERENCE" not found; SQL statement:
+alter table IntextReference drop constraint FK861B8B794FF2DB2C [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "INTEXTREFERENCE" not found; SQL statement:
+alter table IntextReference drop constraint FK861B8B79BC5DA539 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "INTEXTREFERENCE" not found; SQL statement:
+alter table IntextReference drop constraint FK861B8B79F7976FC5 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "INTEXTREFERENCE" not found; SQL statement:
+alter table IntextReference drop constraint FK861B8B79994CCE20 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "INTEXTREFERENCE" not found; SQL statement:
+alter table IntextReference drop constraint FK861B8B7937998500 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "INTEXTREFERENCE" not found; SQL statement:
+alter table IntextReference drop constraint FK861B8B79C2C29593 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "INTEXTREFERENCE" not found; SQL statement:
+alter table IntextReference drop constraint FK861B8B795CB60F3B [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "INTEXTREFERENCE" not found; SQL statement:
+alter table IntextReference drop constraint FK861B8B798D0FB4DA [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "INTEXTREFERENCE" not found; SQL statement:
+alter table IntextReference drop constraint FK861B8B79AEC8CCAA [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "INTEXTREFERENCE" not found; SQL statement:
+alter table IntextReference drop constraint FK861B8B79DA935185 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "INTEXTREFERENCE" not found; SQL statement:
+alter table IntextReference drop constraint FK861B8B79EE6B45A6 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "INTEXTREFERENCE_AUD" not found; SQL statement:
+alter table IntextReference_AUD drop constraint FKAE3354CA34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "KEYSTATEMENT" not found; SQL statement:
+alter table KeyStatement drop constraint FK7125B9F04FF2DB2C [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "KEYSTATEMENT" not found; SQL statement:
+alter table KeyStatement drop constraint FK7125B9F0BC5DA539 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "KEYSTATEMENT_AUD" not found; SQL statement:
+alter table KeyStatement_AUD drop constraint FK93036FC134869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "KEYSTATEMENT_LANGUAGESTRING" not found; SQL statement:
+alter table KeyStatement_LanguageString drop constraint FK70BB5FD89C782795 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "KEYSTATEMENT_LANGUAGESTRING" not found; SQL statement:
+alter table KeyStatement_LanguageString drop constraint FK70BB5FD8DA0C376A [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "KEYSTATEMENT_LANGUAGESTRING" not found; SQL statement:
+alter table KeyStatement_LanguageString drop constraint FK70BB5FD8AAA67049 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "KEYSTATEMENT_LANGUAGESTRING_AUD" not found; SQL statement:
+alter table KeyStatement_LanguageString_AUD drop constraint FKE203E1A934869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "LSIDAUTHORITY" not found; SQL statement:
+alter table LSIDAuthority drop constraint FK759DB8814FF2DB2C [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "LSIDAUTHORITY_NAMESPACES" not found; SQL statement:
+alter table LSIDAuthority_namespaces drop constraint FKB04948F64FFCFD94 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "LANGUAGESTRING" not found; SQL statement:
+alter table LanguageString drop constraint FKB5FDC9A94FF2DB2C [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "LANGUAGESTRING" not found; SQL statement:
+alter table LanguageString drop constraint FKB5FDC9A9BC5DA539 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "LANGUAGESTRING" not found; SQL statement:
+alter table LanguageString drop constraint FKB5FDC9A9E8D36B00 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "LANGUAGESTRING_AUD" not found; SQL statement:
+alter table LanguageString_AUD drop constraint FK896AFAFA34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "LANGUAGESTRING_ANNOTATION" not found; SQL statement:
+alter table LanguageString_Annotation drop constraint FK8400DFA51E403E0B [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "LANGUAGESTRING_ANNOTATION" not found; SQL statement:
+alter table LanguageString_Annotation drop constraint FK8400DFA537998500 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "LANGUAGESTRING_ANNOTATION_AUD" not found; SQL statement:
+alter table LanguageString_Annotation_AUD drop constraint FKD3BAB2F634869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "LANGUAGESTRING_MARKER" not found; SQL statement:
+alter table LanguageString_Marker drop constraint FK8DA633B0777265A1 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "LANGUAGESTRING_MARKER" not found; SQL statement:
+alter table LanguageString_Marker drop constraint FK8DA633B037998500 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "LANGUAGESTRING_MARKER_AUD" not found; SQL statement:
+alter table LanguageString_Marker_AUD drop constraint FK2331098134869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MARKER" not found; SQL statement:
+alter table Marker drop constraint FK88F1805A4FF2DB2C [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MARKER" not found; SQL statement:
+alter table Marker drop constraint FK88F1805ABC5DA539 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MARKER" not found; SQL statement:
+alter table Marker drop constraint FK88F1805AD64DC020 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MARKER_AUD" not found; SQL statement:
+alter table Marker_AUD drop constraint FKB951F12B34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MATERIALORMETHODEVENT" not found; SQL statement:
+alter table MaterialOrMethodEvent drop constraint FK458A264F4FF2DB2C [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MATERIALORMETHODEVENT" not found; SQL statement:
+alter table MaterialOrMethodEvent drop constraint FK458A264FBC5DA539 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MATERIALORMETHODEVENT" not found; SQL statement:
+alter table MaterialOrMethodEvent drop constraint FK458A264F3DA462D5 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MATERIALORMETHODEVENT" not found; SQL statement:
+alter table MaterialOrMethodEvent drop constraint FK458A264F14D2C695 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MATERIALORMETHODEVENT" not found; SQL statement:
+alter table MaterialOrMethodEvent drop constraint FK458A264F3781DA30 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MATERIALORMETHODEVENT" not found; SQL statement:
+alter table MaterialOrMethodEvent drop constraint FK458A264F1600EAB3 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MATERIALORMETHODEVENT" not found; SQL statement:
+alter table MaterialOrMethodEvent drop constraint FK458A264F9A129634 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MATERIALORMETHODEVENT_AUD" not found; SQL statement:
+alter table MaterialOrMethodEvent_AUD drop constraint FK8C8C94A034869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MATERIALORMETHODEVENT_ANNOTATION" not found; SQL statement:
+alter table MaterialOrMethodEvent_Annotation drop constraint FKD9943F3F1E403E0B [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MATERIALORMETHODEVENT_ANNOTATION" not found; SQL statement:
+alter table MaterialOrMethodEvent_Annotation drop constraint FKD9943F3F2F50355A [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MATERIALORMETHODEVENT_ANNOTATION_AUD" not found; SQL statement:
+alter table MaterialOrMethodEvent_Annotation_AUD drop constraint FK6B00B59034869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MATERIALORMETHODEVENT_MARKER" not found; SQL statement:
+alter table MaterialOrMethodEvent_Marker drop constraint FKF0BD704A777265A1 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MATERIALORMETHODEVENT_MARKER" not found; SQL statement:
+alter table MaterialOrMethodEvent_Marker drop constraint FKF0BD704A2F50355A [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MATERIALORMETHODEVENT_MARKER_AUD" not found; SQL statement:
+alter table MaterialOrMethodEvent_Marker_AUD drop constraint FK78C4691B34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MEDIA" not found; SQL statement:
+alter table Media drop constraint FK46C7FC44FF2DB2C [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MEDIA" not found; SQL statement:
+alter table Media drop constraint FK46C7FC4BC5DA539 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MEDIA" not found; SQL statement:
+alter table Media drop constraint FK46C7FC4C2445443 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MEDIAKEY_NAMEDAREA" not found; SQL statement:
+alter table MediaKey_NamedArea drop constraint FK31E7D4023FF8E7B2 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MEDIAKEY_NAMEDAREA" not found; SQL statement:
+alter table MediaKey_NamedArea drop constraint FK31E7D402BE59D760 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MEDIAKEY_NAMEDAREA_AUD" not found; SQL statement:
+alter table MediaKey_NamedArea_AUD drop constraint FK922630D334869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MEDIAKEY_SCOPE" not found; SQL statement:
+alter table MediaKey_Scope drop constraint FKBFFEE8F05431B96E [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MEDIAKEY_SCOPE" not found; SQL statement:
+alter table MediaKey_Scope drop constraint FKBFFEE8F0BE59D760 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MEDIAKEY_SCOPE_AUD" not found; SQL statement:
+alter table MediaKey_Scope_AUD drop constraint FK63AD1EC134869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MEDIAKEY_TAXON" not found; SQL statement:
+alter table MediaKey_Taxon drop constraint FKC00C3966DE9A3E39 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MEDIAKEY_TAXON" not found; SQL statement:
+alter table MediaKey_Taxon drop constraint FKC00C3966815C7E9 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MEDIAKEY_TAXON_AUD" not found; SQL statement:
+alter table MediaKey_Taxon_AUD drop constraint FK311443734869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MEDIAREPRESENTATION" not found; SQL statement:
+alter table MediaRepresentation drop constraint FK1966BDB14FF2DB2C [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MEDIAREPRESENTATION" not found; SQL statement:
+alter table MediaRepresentation drop constraint FK1966BDB1BC5DA539 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MEDIAREPRESENTATION" not found; SQL statement:
+alter table MediaRepresentation drop constraint FK1966BDB1C2C29593 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MEDIAREPRESENTATIONPART" not found; SQL statement:
+alter table MediaRepresentationPart drop constraint FK67A455444FF2DB2C [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MEDIAREPRESENTATIONPART" not found; SQL statement:
+alter table MediaRepresentationPart drop constraint FK67A45544BC5DA539 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MEDIAREPRESENTATIONPART" not found; SQL statement:
+alter table MediaRepresentationPart drop constraint FK67A45544E3818E37 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MEDIAREPRESENTATIONPART_AUD" not found; SQL statement:
+alter table MediaRepresentationPart_AUD drop constraint FKA75C411534869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MEDIAREPRESENTATION_AUD" not found; SQL statement:
+alter table MediaRepresentation_AUD drop constraint FK67AAAB0234869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MEDIAREPRESENTATION_MEDIAREPRESENTATIONPART_AUD" not found; SQL statement:
+alter table MediaRepresentation_MediaRepresentationPart_AUD drop constraint FK3544378734869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MEDIA_AUD" not found; SQL statement:
+alter table Media_AUD drop constraint FKF70B2B9534869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MEDIA_ANNOTATION" not found; SQL statement:
+alter table Media_Annotation drop constraint FKA020DAAA1E403E0B [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MEDIA_ANNOTATION" not found; SQL statement:
+alter table Media_Annotation drop constraint FKA020DAAAC2C29593 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MEDIA_ANNOTATION_AUD" not found; SQL statement:
+alter table Media_Annotation_AUD drop constraint FK99ABA37B34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MEDIA_CREDIT" not found; SQL statement:
+alter table Media_Credit drop constraint FKC1F78FF432D1B9F [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MEDIA_CREDIT" not found; SQL statement:
+alter table Media_Credit drop constraint FKC1F78FF4C2C29593 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MEDIA_CREDIT_AUD" not found; SQL statement:
+alter table Media_Credit_AUD drop constraint FKDB32A3C534869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MEDIA_DESCRIPTION" not found; SQL statement:
+alter table Media_Description drop constraint FK368283E12BEBA58D [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MEDIA_DESCRIPTION" not found; SQL statement:
+alter table Media_Description drop constraint FK368283E128459272 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MEDIA_DESCRIPTION" not found; SQL statement:
+alter table Media_Description drop constraint FK368283E1C2C29593 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MEDIA_DESCRIPTION_AUD" not found; SQL statement:
+alter table Media_Description_AUD drop constraint FK6817D93234869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MEDIA_EXTENSION" not found; SQL statement:
+alter table Media_Extension drop constraint FKDB62D164927DE9DF [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MEDIA_EXTENSION" not found; SQL statement:
+alter table Media_Extension drop constraint FKDB62D164C2C29593 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MEDIA_EXTENSION_AUD" not found; SQL statement:
+alter table Media_Extension_AUD drop constraint FKE13FAD3534869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MEDIA_IDENTIFIER" not found; SQL statement:
+alter table Media_Identifier drop constraint FK9C599C24E12073FF [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MEDIA_IDENTIFIER" not found; SQL statement:
+alter table Media_Identifier drop constraint FK9C599C24C2C29593 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MEDIA_IDENTIFIER_AUD" not found; SQL statement:
+alter table Media_Identifier_AUD drop constraint FK605317F534869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MEDIA_LANGUAGESTRING" not found; SQL statement:
+alter table Media_LanguageString drop constraint FK353DB784A1CA19B1 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MEDIA_LANGUAGESTRING" not found; SQL statement:
+alter table Media_LanguageString drop constraint FK353DB784A0A6EDCE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MEDIA_LANGUAGESTRING" not found; SQL statement:
+alter table Media_LanguageString drop constraint FK353DB784C2C29593 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MEDIA_LANGUAGESTRING_AUD" not found; SQL statement:
+alter table Media_LanguageString_AUD drop constraint FK68FA835534869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MEDIA_MARKER" not found; SQL statement:
+alter table Media_Marker drop constraint FKD21E7935777265A1 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MEDIA_MARKER" not found; SQL statement:
+alter table Media_Marker drop constraint FKD21E7935C2C29593 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MEDIA_MARKER_AUD" not found; SQL statement:
+alter table Media_Marker_AUD drop constraint FK3F51048634869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MEDIA_ORIGINALSOURCEBASE" not found; SQL statement:
+alter table Media_OriginalSourceBase drop constraint FK2FEEB6B83A6735D9 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MEDIA_ORIGINALSOURCEBASE" not found; SQL statement:
+alter table Media_OriginalSourceBase drop constraint FK2FEEB6B8C2C29593 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MEDIA_ORIGINALSOURCEBASE_AUD" not found; SQL statement:
+alter table Media_OriginalSourceBase_AUD drop constraint FK97F0C88934869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MEDIA_REPRESENTATION" not found; SQL statement:
+alter table Media_Representation drop constraint FK1B8712C88F6CABE6 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MEDIA_REPRESENTATION" not found; SQL statement:
+alter table Media_Representation drop constraint FK1B8712C8BE59D760 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MEDIA_REPRESENTATION_AUD" not found; SQL statement:
+alter table Media_Representation_AUD drop constraint FK8DC9C9934869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MEDIA_RIGHTSINFO" not found; SQL statement:
+alter table Media_RightsInfo drop constraint FKAB2186A0C13F7B21 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MEDIA_RIGHTSINFO" not found; SQL statement:
+alter table Media_RightsInfo drop constraint FKAB2186A0C2C29593 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MEDIA_RIGHTSINFO_AUD" not found; SQL statement:
+alter table Media_RightsInfo_AUD drop constraint FK9BE9647134869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MEDIA_SEQUENCE" not found; SQL statement:
+alter table Media_Sequence drop constraint FK61D09FCF29B4761 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MEDIA_SEQUENCE" not found; SQL statement:
+alter table Media_Sequence drop constraint FK61D09FC3282B64 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MEDIA_SEQUENCE_AUD" not found; SQL statement:
+alter table Media_Sequence_AUD drop constraint FK3C7BD9CD34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MEDIA_TAXONBASE" not found; SQL statement:
+alter table Media_TaxonBase drop constraint FK1ABD49E07C3D0017 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MEDIA_TAXONBASE" not found; SQL statement:
+alter table Media_TaxonBase drop constraint FK1ABD49E0BE59D760 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MEDIA_TAXONBASE_AUD" not found; SQL statement:
+alter table Media_TaxonBase_AUD drop constraint FK857187B134869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MULTIACCESSKEY_NAMEDAREA" not found; SQL statement:
+alter table MultiAccessKey_NamedArea drop constraint FK1F5A74893FF8E7B2 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MULTIACCESSKEY_NAMEDAREA" not found; SQL statement:
+alter table MultiAccessKey_NamedArea drop constraint FK1F5A7489B4555A9A [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MULTIACCESSKEY_NAMEDAREA_AUD" not found; SQL statement:
+alter table MultiAccessKey_NamedArea_AUD drop constraint FK4CB735DA34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MULTIACCESSKEY_SCOPE" not found; SQL statement:
+alter table MultiAccessKey_Scope drop constraint FKCC6CE4F75431B96E [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MULTIACCESSKEY_SCOPE" not found; SQL statement:
+alter table MultiAccessKey_Scope drop constraint FKCC6CE4F7B4555A9A [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MULTIACCESSKEY_SCOPE_AUD" not found; SQL statement:
+alter table MultiAccessKey_Scope_AUD drop constraint FK511FBF4834869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MULTIACCESSKEY_TAXON" not found; SQL statement:
+alter table MultiAccessKey_Taxon drop constraint FKCC7A356DDE9A3E39 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MULTIACCESSKEY_TAXON" not found; SQL statement:
+alter table MultiAccessKey_Taxon drop constraint FKCC7A356DB64A7B29 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MULTIACCESSKEY_TAXON_AUD" not found; SQL statement:
+alter table MultiAccessKey_Taxon_AUD drop constraint FKF083E4BE34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "NAMERELATIONSHIP" not found; SQL statement:
+alter table NameRelationship drop constraint FK5E510834FF2DB2C [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "NAMERELATIONSHIP" not found; SQL statement:
+alter table NameRelationship drop constraint FK5E51083BC5DA539 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "NAMERELATIONSHIP" not found; SQL statement:
+alter table NameRelationship drop constraint FK5E51083AEB7F3BE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "NAMERELATIONSHIP" not found; SQL statement:
+alter table NameRelationship drop constraint FK5E5108316CDFF85 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "NAMERELATIONSHIP" not found; SQL statement:
+alter table NameRelationship drop constraint FK5E5108328482454 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "NAMERELATIONSHIP" not found; SQL statement:
+alter table NameRelationship drop constraint FK5E51083AF619DE3 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "NAMERELATIONSHIP_AUD" not found; SQL statement:
+alter table NameRelationship_AUD drop constraint FK743F44D434869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "NAMERELATIONSHIP_ANNOTATION" not found; SQL statement:
+alter table NameRelationship_Annotation drop constraint FK2E38AC8B1E403E0B [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "NAMERELATIONSHIP_ANNOTATION" not found; SQL statement:
+alter table NameRelationship_Annotation drop constraint FK2E38AC8B7B4CB560 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "NAMERELATIONSHIP_ANNOTATION_AUD" not found; SQL statement:
+alter table NameRelationship_Annotation_AUD drop constraint FKD1D59CDC34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "NAMERELATIONSHIP_MARKER" not found; SQL statement:
+alter table NameRelationship_Marker drop constraint FKE3E46396777265A1 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "NAMERELATIONSHIP_MARKER" not found; SQL statement:
+alter table NameRelationship_Marker drop constraint FKE3E463967B4CB560 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "NAMERELATIONSHIP_MARKER_AUD" not found; SQL statement:
+alter table NameRelationship_Marker_AUD drop constraint FKCD68D66734869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "NOMENCLATURALSTATUS" not found; SQL statement:
+alter table NomenclaturalStatus drop constraint FK1FFEC88B4FF2DB2C [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "NOMENCLATURALSTATUS" not found; SQL statement:
+alter table NomenclaturalStatus drop constraint FK1FFEC88BBC5DA539 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "NOMENCLATURALSTATUS" not found; SQL statement:
+alter table NomenclaturalStatus drop constraint FK1FFEC88BAEB7F3BE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "NOMENCLATURALSTATUS" not found; SQL statement:
+alter table NomenclaturalStatus drop constraint FK1FFEC88B7029BD9F [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "NOMENCLATURALSTATUS_AUD" not found; SQL statement:
+alter table NomenclaturalStatus_AUD drop constraint FKFB2DB8DC34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "NOMENCLATURALSTATUS_ANNOTATION" not found; SQL statement:
+alter table NomenclaturalStatus_Annotation drop constraint FKE6E91F831E403E0B [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "NOMENCLATURALSTATUS_ANNOTATION" not found; SQL statement:
+alter table NomenclaturalStatus_Annotation drop constraint FKE6E91F838D2CB1D4 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "NOMENCLATURALSTATUS_ANNOTATION_AUD" not found; SQL statement:
+alter table NomenclaturalStatus_Annotation_AUD drop constraint FK6A3D3D434869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "NOMENCLATURALSTATUS_MARKER" not found; SQL statement:
+alter table NomenclaturalStatus_Marker drop constraint FK2F5128E777265A1 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "NOMENCLATURALSTATUS_MARKER" not found; SQL statement:
+alter table NomenclaturalStatus_Marker drop constraint FK2F5128E8D2CB1D4 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "NOMENCLATURALSTATUS_MARKER_AUD" not found; SQL statement:
+alter table NomenclaturalStatus_Marker_AUD drop constraint FK8619495F34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "ORIGINALSOURCEBASE" not found; SQL statement:
+alter table OriginalSourceBase drop constraint FK505F2E5D4FF2DB2C [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "ORIGINALSOURCEBASE" not found; SQL statement:
+alter table OriginalSourceBase drop constraint FK505F2E5DBC5DA539 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "ORIGINALSOURCEBASE" not found; SQL statement:
+alter table OriginalSourceBase drop constraint FK505F2E5DAEB7F3BE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "ORIGINALSOURCEBASE" not found; SQL statement:
+alter table OriginalSourceBase drop constraint FK505F2E5D966B96B2 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "ORIGINALSOURCEBASE_AUD" not found; SQL statement:
+alter table OriginalSourceBase_AUD drop constraint FK9662E5AE34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "ORIGINALSOURCEBASE_ANNOTATION" not found; SQL statement:
+alter table OriginalSourceBase_Annotation drop constraint FK208142711E403E0B [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "ORIGINALSOURCEBASE_ANNOTATION" not found; SQL statement:
+alter table OriginalSourceBase_Annotation drop constraint FK20814271B029DDA0 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "ORIGINALSOURCEBASE_ANNOTATION_AUD" not found; SQL statement:
+alter table OriginalSourceBase_Annotation_AUD drop constraint FKA074CFC234869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "ORIGINALSOURCEBASE_MARKER" not found; SQL statement:
+alter table OriginalSourceBase_Marker drop constraint FKB3FFDC7C777265A1 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "ORIGINALSOURCEBASE_MARKER" not found; SQL statement:
+alter table OriginalSourceBase_Marker drop constraint FKB3FFDC7CB029DDA0 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "ORIGINALSOURCEBASE_MARKER_AUD" not found; SQL statement:
+alter table OriginalSourceBase_Marker_AUD drop constraint FKBFB16C4D34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "PERMISSIONGROUP" not found; SQL statement:
+alter table PermissionGroup drop constraint FK629941D04FF2DB2C [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "PERMISSIONGROUP_GRANTEDAUTHORITYIMPL" not found; SQL statement:
+alter table PermissionGroup_GrantedAuthorityImpl drop constraint FK53114371857F6C2 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "PERMISSIONGROUP_GRANTEDAUTHORITYIMPL" not found; SQL statement:
+alter table PermissionGroup_GrantedAuthorityImpl drop constraint FK5311437CA0971A3 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "POLYTOMOUSKEY" not found; SQL statement:
+alter table PolytomousKey drop constraint FKA9E6B1384FF2DB2C [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "POLYTOMOUSKEY" not found; SQL statement:
+alter table PolytomousKey drop constraint FKA9E6B138BC5DA539 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "POLYTOMOUSKEY" not found; SQL statement:
+alter table PolytomousKey drop constraint FKA9E6B138576595C3 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "POLYTOMOUSKEYNODE" not found; SQL statement:
+alter table PolytomousKeyNode drop constraint FK860775A4FF2DB2C [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "POLYTOMOUSKEYNODE" not found; SQL statement:
+alter table PolytomousKeyNode drop constraint FK860775ABC5DA539 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "POLYTOMOUSKEYNODE" not found; SQL statement:
+alter table PolytomousKeyNode drop constraint FK860775A4220AFEB [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "POLYTOMOUSKEYNODE" not found; SQL statement:
+alter table PolytomousKeyNode drop constraint FK860775AC73A7584 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "POLYTOMOUSKEYNODE" not found; SQL statement:
+alter table PolytomousKeyNode drop constraint FK860775A4FEE4393 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "POLYTOMOUSKEYNODE" not found; SQL statement:
+alter table PolytomousKeyNode drop constraint FK860775A808998FB [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "POLYTOMOUSKEYNODE" not found; SQL statement:
+alter table PolytomousKeyNode drop constraint FK860775A9D3C2E93 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "POLYTOMOUSKEYNODE" not found; SQL statement:
+alter table PolytomousKeyNode drop constraint FK860775A4382686A [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "POLYTOMOUSKEYNODE" not found; SQL statement:
+alter table PolytomousKeyNode drop constraint FK860775A1C0483C4 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "POLYTOMOUSKEYNODE" not found; SQL statement:
+alter table PolytomousKeyNode drop constraint FK860775ADE9A3E39 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "POLYTOMOUSKEYNODE_AUD" not found; SQL statement:
+alter table PolytomousKeyNode_AUD drop constraint FK6A6D682B34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "POLYTOMOUSKEYNODE_LANGUAGESTRING" not found; SQL statement:
+alter table PolytomousKeyNode_LanguageString drop constraint FK5574E12EF05D08D4 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "POLYTOMOUSKEYNODE_LANGUAGESTRING" not found; SQL statement:
+alter table PolytomousKeyNode_LanguageString drop constraint FK5574E12E9682414B [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "POLYTOMOUSKEYNODE_LANGUAGESTRING" not found; SQL statement:
+alter table PolytomousKeyNode_LanguageString drop constraint FK5574E12EF135C42B [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "POLYTOMOUSKEYNODE_LANGUAGESTRING_AUD" not found; SQL statement:
+alter table PolytomousKeyNode_LanguageString_AUD drop constraint FKE0D0C7FF34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "POLYTOMOUSKEY_AUD" not found; SQL statement:
+alter table PolytomousKey_AUD drop constraint FK867830934869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "POLYTOMOUSKEY_ANNOTATION" not found; SQL statement:
+alter table PolytomousKey_Annotation drop constraint FK278CF8B61E403E0B [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "POLYTOMOUSKEY_ANNOTATION" not found; SQL statement:
+alter table PolytomousKey_Annotation drop constraint FK278CF8B689D97CB [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "POLYTOMOUSKEY_ANNOTATION_AUD" not found; SQL statement:
+alter table PolytomousKey_Annotation_AUD drop constraint FK3281DB8734869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "POLYTOMOUSKEY_CREDIT" not found; SQL statement:
+alter table PolytomousKey_Credit drop constraint FKADC940032D1B9F [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "POLYTOMOUSKEY_CREDIT" not found; SQL statement:
+alter table PolytomousKey_Credit drop constraint FKADC940089D97CB [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "POLYTOMOUSKEY_CREDIT_AUD" not found; SQL statement:
+alter table PolytomousKey_Credit_AUD drop constraint FK629EC1D134869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "POLYTOMOUSKEY_EXTENSION" not found; SQL statement:
+alter table PolytomousKey_Extension drop constraint FKAE34C1D8927DE9DF [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "POLYTOMOUSKEY_EXTENSION" not found; SQL statement:
+alter table PolytomousKey_Extension drop constraint FKAE34C1D889D97CB [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "POLYTOMOUSKEY_EXTENSION_AUD" not found; SQL statement:
+alter table PolytomousKey_Extension_AUD drop constraint FK1FFC43A934869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "POLYTOMOUSKEY_IDENTIFIER" not found; SQL statement:
+alter table PolytomousKey_Identifier drop constraint FK23C5BA30E12073FF [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "POLYTOMOUSKEY_IDENTIFIER" not found; SQL statement:
+alter table PolytomousKey_Identifier drop constraint FK23C5BA3089D97CB [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "POLYTOMOUSKEY_IDENTIFIER_AUD" not found; SQL statement:
+alter table PolytomousKey_Identifier_AUD drop constraint FKF929500134869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "POLYTOMOUSKEY_MARKER" not found; SQL statement:
+alter table PolytomousKey_Marker drop constraint FK1B037D41777265A1 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "POLYTOMOUSKEY_MARKER" not found; SQL statement:
+alter table PolytomousKey_Marker drop constraint FK1B037D4189D97CB [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "POLYTOMOUSKEY_MARKER_AUD" not found; SQL statement:
+alter table PolytomousKey_Marker_AUD drop constraint FKC6BD229234869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "POLYTOMOUSKEY_NAMEDAREA" not found; SQL statement:
+alter table PolytomousKey_NamedArea drop constraint FK1C727CFF3FF8E7B2 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "POLYTOMOUSKEY_NAMEDAREA" not found; SQL statement:
+alter table PolytomousKey_NamedArea drop constraint FK1C727CFF89D97CB [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "POLYTOMOUSKEY_NAMEDAREA_AUD" not found; SQL statement:
+alter table PolytomousKey_NamedArea_AUD drop constraint FK750A135034869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "POLYTOMOUSKEY_ORIGINALSOURCEBASE" not found; SQL statement:
+alter table PolytomousKey_OriginalSourceBase drop constraint FK839208C43A6735D9 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "POLYTOMOUSKEY_ORIGINALSOURCEBASE" not found; SQL statement:
+alter table PolytomousKey_OriginalSourceBase drop constraint FK839208C489D97CB [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "POLYTOMOUSKEY_ORIGINALSOURCEBASE_AUD" not found; SQL statement:
+alter table PolytomousKey_OriginalSourceBase_AUD drop constraint FKE644349534869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "POLYTOMOUSKEY_RIGHTSINFO" not found; SQL statement:
+alter table PolytomousKey_RightsInfo drop constraint FK328DA4ACC13F7B21 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "POLYTOMOUSKEY_RIGHTSINFO" not found; SQL statement:
+alter table PolytomousKey_RightsInfo drop constraint FK328DA4AC89D97CB [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "POLYTOMOUSKEY_RIGHTSINFO_AUD" not found; SQL statement:
+alter table PolytomousKey_RightsInfo_AUD drop constraint FK34BF9C7D34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "POLYTOMOUSKEY_SCOPE" not found; SQL statement:
+alter table PolytomousKey_Scope drop constraint FK8D97986D5431B96E [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "POLYTOMOUSKEY_SCOPE" not found; SQL statement:
+alter table PolytomousKey_Scope drop constraint FK8D97986D89D97CB [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "POLYTOMOUSKEY_SCOPE_AUD" not found; SQL statement:
+alter table PolytomousKey_Scope_AUD drop constraint FK4E37C7BE34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "POLYTOMOUSKEY_TAXON" not found; SQL statement:
+alter table PolytomousKey_Taxon drop constraint FK8DA4E8E3DE9A3E39 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "POLYTOMOUSKEY_TAXON" not found; SQL statement:
+alter table PolytomousKey_Taxon drop constraint FK8DA4E8E389D97CB [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "POLYTOMOUSKEY_TAXONBASE" not found; SQL statement:
+alter table PolytomousKey_TaxonBase drop constraint FKED8F3A547C3D0017 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "POLYTOMOUSKEY_TAXONBASE" not found; SQL statement:
+alter table PolytomousKey_TaxonBase drop constraint FKED8F3A5489D97CB [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "POLYTOMOUSKEY_TAXONBASE_AUD" not found; SQL statement:
+alter table PolytomousKey_TaxonBase_AUD drop constraint FKC42E1E2534869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "POLYTOMOUSKEY_TAXON_AUD" not found; SQL statement:
+alter table PolytomousKey_Taxon_AUD drop constraint FKED9BED3434869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "PRIMER" not found; SQL statement:
+alter table Primer drop constraint FK8EFB89F34FF2DB2C [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "PRIMER" not found; SQL statement:
+alter table Primer drop constraint FK8EFB89F3BC5DA539 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "PRIMER" not found; SQL statement:
+alter table Primer drop constraint FK8EFB89F36D2CE418 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "PRIMER" not found; SQL statement:
+alter table Primer drop constraint FK8EFB89F3D0374392 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "PRIMER_AUD" not found; SQL statement:
+alter table Primer_AUD drop constraint FK319B864434869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "PRIMER_ANNOTATION" not found; SQL statement:
+alter table Primer_Annotation drop constraint FK9044ED1B1E403E0B [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "PRIMER_ANNOTATION" not found; SQL statement:
+alter table Primer_Annotation drop constraint FK9044ED1B48BD1F55 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "PRIMER_ANNOTATION_AUD" not found; SQL statement:
+alter table Primer_Annotation_AUD drop constraint FKDBAF156C34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "PRIMER_MARKER" not found; SQL statement:
+alter table Primer_Marker drop constraint FKF6C76C26777265A1 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "PRIMER_MARKER" not found; SQL statement:
+alter table Primer_Marker drop constraint FKF6C76C2648BD1F55 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "PRIMER_MARKER_AUD" not found; SQL statement:
+alter table Primer_Marker_AUD drop constraint FK2F7516F734869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "REFERENCE" not found; SQL statement:
+alter table Reference drop constraint FK404D5F2B4FF2DB2C [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "REFERENCE" not found; SQL statement:
+alter table Reference drop constraint FK404D5F2BBC5DA539 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "REFERENCE" not found; SQL statement:
+alter table Reference drop constraint FK404D5F2BD741CE1F [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "REFERENCE" not found; SQL statement:
+alter table Reference drop constraint FK404D5F2BAD54327F [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "REFERENCE" not found; SQL statement:
+alter table Reference drop constraint FK404D5F2B403E17F4 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "REFERENCE" not found; SQL statement:
+alter table Reference drop constraint FK404D5F2BAEC3B8B8 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "REFERENCE_AUD" not found; SQL statement:
+alter table Reference_AUD drop constraint FK8F0FFF7C34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "REFERENCE_ANNOTATION" not found; SQL statement:
+alter table Reference_Annotation drop constraint FKFC824E31E403E0B [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "REFERENCE_ANNOTATION" not found; SQL statement:
+alter table Reference_Annotation drop constraint FKFC824E38D0FB4DA [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "REFERENCE_ANNOTATION_AUD" not found; SQL statement:
+alter table Reference_Annotation_AUD drop constraint FKF3C1293434869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "REFERENCE_CREDIT" not found; SQL statement:
+alter table Reference_Credit drop constraint FK5BC6DEAD32D1B9F [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "REFERENCE_CREDIT" not found; SQL statement:
+alter table Reference_Credit drop constraint FK5BC6DEAD8D0FB4DA [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "REFERENCE_CREDIT_AUD" not found; SQL statement:
+alter table Reference_Credit_AUD drop constraint FK4AD9EDFE34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "REFERENCE_EXTENSION" not found; SQL statement:
+alter table Reference_Extension drop constraint FKDEFCDC0B927DE9DF [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "REFERENCE_EXTENSION" not found; SQL statement:
+alter table Reference_Extension drop constraint FKDEFCDC0B8D0FB4DA [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "REFERENCE_EXTENSION_AUD" not found; SQL statement:
+alter table Reference_Extension_AUD drop constraint FK1DF60C5C34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "REFERENCE_IDENTIFIER" not found; SQL statement:
+alter table Reference_Identifier drop constraint FKC00E65DE12073FF [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "REFERENCE_IDENTIFIER" not found; SQL statement:
+alter table Reference_Identifier drop constraint FKC00E65D8D0FB4DA [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "REFERENCE_IDENTIFIER_AUD" not found; SQL statement:
+alter table Reference_Identifier_AUD drop constraint FKBA689DAE34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "REFERENCE_MARKER" not found; SQL statement:
+alter table Reference_Marker drop constraint FK6BEDC7EE777265A1 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "REFERENCE_MARKER" not found; SQL statement:
+alter table Reference_Marker drop constraint FK6BEDC7EE8D0FB4DA [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "REFERENCE_MARKER_AUD" not found; SQL statement:
+alter table Reference_Marker_AUD drop constraint FKAEF84EBF34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "REFERENCE_MEDIA" not found; SQL statement:
+alter table Reference_Media drop constraint FKBBEF5B0C2C29593 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "REFERENCE_MEDIA" not found; SQL statement:
+alter table Reference_Media drop constraint FKBBEF5B08D0FB4DA [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "REFERENCE_MEDIA_AUD" not found; SQL statement:
+alter table Reference_Media_AUD drop constraint FK8318CB8134869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "REFERENCE_ORIGINALSOURCEBASE" not found; SQL statement:
+alter table Reference_OriginalSourceBase drop constraint FKD3E8B7F13A6735D9 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "REFERENCE_ORIGINALSOURCEBASE" not found; SQL statement:
+alter table Reference_OriginalSourceBase drop constraint FKD3E8B7F18D0FB4DA [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "REFERENCE_ORIGINALSOURCEBASE_AUD" not found; SQL statement:
+alter table Reference_OriginalSourceBase_AUD drop constraint FKC025854234869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "REFERENCE_RIGHTSINFO" not found; SQL statement:
+alter table Reference_RightsInfo drop constraint FK1AC8D0D9C13F7B21 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "REFERENCE_RIGHTSINFO" not found; SQL statement:
+alter table Reference_RightsInfo drop constraint FK1AC8D0D98D0FB4DA [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "REFERENCE_RIGHTSINFO_AUD" not found; SQL statement:
+alter table Reference_RightsInfo_AUD drop constraint FKF5FEEA2A34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "RELATIONSHIPTERMBASE_INVERSEREPRESENTATION" not found; SQL statement:
+alter table RelationshipTermBase_inverseRepresentation drop constraint FK98592F33473FB677 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "RELATIONSHIPTERMBASE_INVERSEREPRESENTATION" not found; SQL statement:
+alter table RelationshipTermBase_inverseRepresentation drop constraint FK98592F33ECEEF4AF [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "RELATIONSHIPTERMBASE_INVERSEREPRESENTATION_AUD" not found; SQL statement:
+alter table RelationshipTermBase_inverseRepresentation_AUD drop constraint FK5D248B8434869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "REPRESENTATION" not found; SQL statement:
+alter table Representation drop constraint FK9C4724ED4FF2DB2C [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "REPRESENTATION" not found; SQL statement:
+alter table Representation drop constraint FK9C4724EDBC5DA539 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "REPRESENTATION" not found; SQL statement:
+alter table Representation drop constraint FK9C4724EDE8D36B00 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "REPRESENTATION_AUD" not found; SQL statement:
+alter table Representation_AUD drop constraint FK294D143E34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "REPRESENTATION_ANNOTATION" not found; SQL statement:
+alter table Representation_Annotation drop constraint FK371091E11E403E0B [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "REPRESENTATION_ANNOTATION" not found; SQL statement:
+alter table Representation_Annotation drop constraint FK371091E147E8AE60 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "REPRESENTATION_ANNOTATION_AUD" not found; SQL statement:
+alter table Representation_Annotation_AUD drop constraint FK36EEE73234869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "REPRESENTATION_MARKER" not found; SQL statement:
+alter table Representation_Marker drop constraint FK560063EC777265A1 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "REPRESENTATION_MARKER" not found; SQL statement:
+alter table Representation_Marker drop constraint FK560063EC47E8AE60 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "REPRESENTATION_MARKER_AUD" not found; SQL statement:
+alter table Representation_Marker_AUD drop constraint FKD640BBBD34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "RIGHTSINFO" not found; SQL statement:
+alter table RightsInfo drop constraint FK252273454FF2DB2C [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "RIGHTSINFO" not found; SQL statement:
+alter table RightsInfo drop constraint FK25227345BC5DA539 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "RIGHTSINFO" not found; SQL statement:
+alter table RightsInfo drop constraint FK25227345E8D36B00 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "RIGHTSINFO" not found; SQL statement:
+alter table RightsInfo drop constraint FK25227345F7976FC5 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "RIGHTSINFO" not found; SQL statement:
+alter table RightsInfo drop constraint FK25227345E6D2D338 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "RIGHTSINFO_AUD" not found; SQL statement:
+alter table RightsInfo_AUD drop constraint FK1CA9769634869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "RIGHTSINFO_ANNOTATION" not found; SQL statement:
+alter table RightsInfo_Annotation drop constraint FKECC95C891E403E0B [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "RIGHTSINFO_ANNOTATION" not found; SQL statement:
+alter table RightsInfo_Annotation drop constraint FKECC95C89EFE62333 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "RIGHTSINFO_ANNOTATION_AUD" not found; SQL statement:
+alter table RightsInfo_Annotation_AUD drop constraint FK78721DDA34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "RIGHTSINFO_MARKER" not found; SQL statement:
+alter table RightsInfo_Marker drop constraint FK81D8C294777265A1 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "RIGHTSINFO_MARKER" not found; SQL statement:
+alter table RightsInfo_Marker drop constraint FK81D8C294EFE62333 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "RIGHTSINFO_MARKER_AUD" not found; SQL statement:
+alter table RightsInfo_Marker_AUD drop constraint FK8BF9866534869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SEQUENCE" not found; SQL statement:
+alter table Sequence drop constraint FK544ADBE14FF2DB2C [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SEQUENCE" not found; SQL statement:
+alter table Sequence drop constraint FK544ADBE1BC5DA539 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SEQUENCE" not found; SQL statement:
+alter table Sequence drop constraint FK544ADBE19F65E72B [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SEQUENCE" not found; SQL statement:
+alter table Sequence drop constraint FK544ADBE16D2CE418 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SEQUENCE" not found; SQL statement:
+alter table Sequence drop constraint FK544ADBE1E671A9DF [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SEQUENCE_AUD" not found; SQL statement:
+alter table Sequence_AUD drop constraint FK39F4313234869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SEQUENCE_ANNOTATION" not found; SQL statement:
+alter table Sequence_Annotation drop constraint FK1010BA6D1E403E0B [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SEQUENCE_ANNOTATION" not found; SQL statement:
+alter table Sequence_Annotation drop constraint FK1010BA6DD57FFDD5 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SEQUENCE_ANNOTATION_AUD" not found; SQL statement:
+alter table Sequence_Annotation_AUD drop constraint FKCB4FE9BE34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SEQUENCE_MARKER" not found; SQL statement:
+alter table Sequence_Marker drop constraint FK3D22B278777265A1 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SEQUENCE_MARKER" not found; SQL statement:
+alter table Sequence_Marker drop constraint FK3D22B278D57FFDD5 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SEQUENCE_MARKER_AUD" not found; SQL statement:
+alter table Sequence_Marker_AUD drop constraint FKAF40E44934869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SEQUENCE_REFERENCE" not found; SQL statement:
+alter table Sequence_Reference drop constraint FK6944904D1DDDC219 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SEQUENCE_REFERENCE" not found; SQL statement:
+alter table Sequence_Reference drop constraint FK6944904DD57FFDD5 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SEQUENCE_REFERENCE_AUD" not found; SQL statement:
+alter table Sequence_Reference_AUD drop constraint FK18E5CF9E34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SINGLEREAD" not found; SQL statement:
+alter table SingleRead drop constraint FKAD45CA1E4FF2DB2C [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SINGLEREAD" not found; SQL statement:
+alter table SingleRead drop constraint FKAD45CA1EBC5DA539 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SINGLEREAD" not found; SQL statement:
+alter table SingleRead drop constraint FKAD45CA1E3DA462D5 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SINGLEREAD" not found; SQL statement:
+alter table SingleRead drop constraint FKAD45CA1ED320A65F [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SINGLEREAD" not found; SQL statement:
+alter table SingleRead drop constraint FKAD45CA1EE0EBCFFE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SINGLEREAD" not found; SQL statement:
+alter table SingleRead drop constraint FKAD45CA1E55DDFE96 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SINGLEREAD" not found; SQL statement:
+alter table SingleRead drop constraint FKAD45CA1E48BD1F55 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SINGLEREADALIGNMENT" not found; SQL statement:
+alter table SingleReadAlignment drop constraint FKE50A79654FF2DB2C [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SINGLEREADALIGNMENT" not found; SQL statement:
+alter table SingleReadAlignment drop constraint FKE50A7965BC5DA539 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SINGLEREADALIGNMENT" not found; SQL statement:
+alter table SingleReadAlignment drop constraint FKE50A7965ECE53A6A [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SINGLEREADALIGNMENT" not found; SQL statement:
+alter table SingleReadAlignment drop constraint FKE50A79653A5A5E15 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SINGLEREADALIGNMENT_AUD" not found; SQL statement:
+alter table SingleReadAlignment_AUD drop constraint FKFEE16CB634869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SINGLEREAD_AUD" not found; SQL statement:
+alter table SingleRead_AUD drop constraint FKA323B8EF34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SINGLEREAD_ANNOTATION" not found; SQL statement:
+alter table SingleRead_Annotation drop constraint FK33E974101E403E0B [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SINGLEREAD_ANNOTATION" not found; SQL statement:
+alter table SingleRead_Annotation drop constraint FK33E974103A5A5E15 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SINGLEREAD_ANNOTATION_AUD" not found; SQL statement:
+alter table SingleRead_Annotation_AUD drop constraint FK7B1D19E134869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SINGLEREAD_MARKER" not found; SQL statement:
+alter table SingleRead_Marker drop constraint FKCF47B59B777265A1 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SINGLEREAD_MARKER" not found; SQL statement:
+alter table SingleRead_Marker drop constraint FKCF47B59B3A5A5E15 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SINGLEREAD_MARKER_AUD" not found; SQL statement:
+alter table SingleRead_Marker_AUD drop constraint FKD3199DEC34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SPECIMENOROBSERVATIONBASE" not found; SQL statement:
+alter table SpecimenOrObservationBase drop constraint FK21CA32724FF2DB2C [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SPECIMENOROBSERVATIONBASE" not found; SQL statement:
+alter table SpecimenOrObservationBase drop constraint FK21CA3272BC5DA539 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SPECIMENOROBSERVATIONBASE" not found; SQL statement:
+alter table SpecimenOrObservationBase drop constraint FK21CA3272F53E6AFA [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SPECIMENOROBSERVATIONBASE" not found; SQL statement:
+alter table SpecimenOrObservationBase drop constraint FK21CA32728C35BD07 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SPECIMENOROBSERVATIONBASE" not found; SQL statement:
+alter table SpecimenOrObservationBase drop constraint FK21CA3272E35D77A3 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SPECIMENOROBSERVATIONBASE" not found; SQL statement:
+alter table SpecimenOrObservationBase drop constraint FK21CA3272EB62BE9A [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SPECIMENOROBSERVATIONBASE" not found; SQL statement:
+alter table SpecimenOrObservationBase drop constraint FK21CA3272156CF96 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SPECIMENOROBSERVATIONBASE" not found; SQL statement:
+alter table SpecimenOrObservationBase drop constraint FK21CA3272C8505DB [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SPECIMENOROBSERVATIONBASE" not found; SQL statement:
+alter table SpecimenOrObservationBase drop constraint FK21CA32727CC340C5 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SPECIMENOROBSERVATIONBASE" not found; SQL statement:
+alter table SpecimenOrObservationBase drop constraint FK21CA327295CC5995 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SPECIMENOROBSERVATIONBASE" not found; SQL statement:
+alter table SpecimenOrObservationBase drop constraint FK21CA32724FF2F98B [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SPECIMENOROBSERVATIONBASE" not found; SQL statement:
+alter table SpecimenOrObservationBase drop constraint FK21CA3272F95F225A [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SPECIMENOROBSERVATIONBASE" not found; SQL statement:
+alter table SpecimenOrObservationBase drop constraint FK21CA3272DADF76EA [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SPECIMENOROBSERVATIONBASE_AUD" not found; SQL statement:
+alter table SpecimenOrObservationBase_AUD drop constraint FKF3D3D74334869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SPECIMENOROBSERVATIONBASE_ANNOTATION" not found; SQL statement:
+alter table SpecimenOrObservationBase_Annotation drop constraint FK365E4F3C1E403E0B [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SPECIMENOROBSERVATIONBASE_ANNOTATION" not found; SQL statement:
+alter table SpecimenOrObservationBase_Annotation drop constraint FK365E4F3C3B8A5ABA [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SPECIMENOROBSERVATIONBASE_ANNOTATION_AUD" not found; SQL statement:
+alter table SpecimenOrObservationBase_Annotation_AUD drop constraint FK34187F0D34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SPECIMENOROBSERVATIONBASE_CREDIT" not found; SQL statement:
+alter table SpecimenOrObservationBase_Credit drop constraint FK7E3A1D8632D1B9F [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SPECIMENOROBSERVATIONBASE_CREDIT" not found; SQL statement:
+alter table SpecimenOrObservationBase_Credit drop constraint FK7E3A1D863B8A5ABA [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SPECIMENOROBSERVATIONBASE_CREDIT_AUD" not found; SQL statement:
+alter table SpecimenOrObservationBase_Credit_AUD drop constraint FK7170185734869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SPECIMENOROBSERVATIONBASE_DERIVATIONEVENT" not found; SQL statement:
+alter table SpecimenOrObservationBase_DerivationEvent drop constraint FK20132036BD59A1AD [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SPECIMENOROBSERVATIONBASE_DERIVATIONEVENT" not found; SQL statement:
+alter table SpecimenOrObservationBase_DerivationEvent drop constraint FK2013203654C216AA [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SPECIMENOROBSERVATIONBASE_DERIVATIONEVENT_AUD" not found; SQL statement:
+alter table SpecimenOrObservationBase_DerivationEvent_AUD drop constraint FKA4A8430734869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SPECIMENOROBSERVATIONBASE_EXTENSION" not found; SQL statement:
+alter table SpecimenOrObservationBase_Extension drop constraint FKE03B8292927DE9DF [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SPECIMENOROBSERVATIONBASE_EXTENSION" not found; SQL statement:
+alter table SpecimenOrObservationBase_Extension drop constraint FKE03B82923B8A5ABA [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SPECIMENOROBSERVATIONBASE_EXTENSION_AUD" not found; SQL statement:
+alter table SpecimenOrObservationBase_Extension_AUD drop constraint FK7AE0176334869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SPECIMENOROBSERVATIONBASE_IDENTIFIER" not found; SQL statement:
+alter table SpecimenOrObservationBase_Identifier drop constraint FK329710B6E12073FF [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SPECIMENOROBSERVATIONBASE_IDENTIFIER" not found; SQL statement:
+alter table SpecimenOrObservationBase_Identifier drop constraint FK329710B63B8A5ABA [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SPECIMENOROBSERVATIONBASE_IDENTIFIER_AUD" not found; SQL statement:
+alter table SpecimenOrObservationBase_Identifier_AUD drop constraint FKFABFF38734869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SPECIMENOROBSERVATIONBASE_LANGUAGESTRING" not found; SQL statement:
+alter table SpecimenOrObservationBase_LanguageString drop constraint FKCFAA9316CD55E0D6 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SPECIMENOROBSERVATIONBASE_LANGUAGESTRING" not found; SQL statement:
+alter table SpecimenOrObservationBase_LanguageString drop constraint FKCFAA93168028C309 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SPECIMENOROBSERVATIONBASE_LANGUAGESTRING" not found; SQL statement:
+alter table SpecimenOrObservationBase_LanguageString drop constraint FKCFAA93163B8A5ABA [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SPECIMENOROBSERVATIONBASE_LANGUAGESTRING_AUD" not found; SQL statement:
+alter table SpecimenOrObservationBase_LanguageString_AUD drop constraint FK38B45E734869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SPECIMENOROBSERVATIONBASE_MARKER" not found; SQL statement:
+alter table SpecimenOrObservationBase_Marker drop constraint FK8E6106C7777265A1 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SPECIMENOROBSERVATIONBASE_MARKER" not found; SQL statement:
+alter table SpecimenOrObservationBase_Marker drop constraint FK8E6106C73B8A5ABA [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SPECIMENOROBSERVATIONBASE_MARKER_AUD" not found; SQL statement:
+alter table SpecimenOrObservationBase_Marker_AUD drop constraint FKD58E791834869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SPECIMENOROBSERVATIONBASE_ORIGINALSOURCEBASE" not found; SQL statement:
+alter table SpecimenOrObservationBase_OriginalSourceBase drop constraint FKCA7F794A3A6735D9 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SPECIMENOROBSERVATIONBASE_ORIGINALSOURCEBASE" not found; SQL statement:
+alter table SpecimenOrObservationBase_OriginalSourceBase drop constraint FKCA7F794A3B8A5ABA [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SPECIMENOROBSERVATIONBASE_ORIGINALSOURCEBASE_AUD" not found; SQL statement:
+alter table SpecimenOrObservationBase_OriginalSourceBase_AUD drop constraint FK2059F21B34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SPECIMENOROBSERVATIONBASE_RIGHTSINFO" not found; SQL statement:
+alter table SpecimenOrObservationBase_RightsInfo drop constraint FK415EFB32C13F7B21 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SPECIMENOROBSERVATIONBASE_RIGHTSINFO" not found; SQL statement:
+alter table SpecimenOrObservationBase_RightsInfo drop constraint FK415EFB323B8A5ABA [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SPECIMENOROBSERVATIONBASE_RIGHTSINFO_AUD" not found; SQL statement:
+alter table SpecimenOrObservationBase_RightsInfo_AUD drop constraint FK3656400334869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "STATEDATA" not found; SQL statement:
+alter table StateData drop constraint FKFB1697BB4FF2DB2C [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "STATEDATA" not found; SQL statement:
+alter table StateData drop constraint FKFB1697BBBC5DA539 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "STATEDATA" not found; SQL statement:
+alter table StateData drop constraint FKFB1697BB9D97028B [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "STATEDATA" not found; SQL statement:
+alter table StateData drop constraint FKFB1697BB682A4E4B [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "STATEDATA_AUD" not found; SQL statement:
+alter table StateData_AUD drop constraint FKDA6A700C34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "STATEDATA_DEFINEDTERMBASE" not found; SQL statement:
+alter table StateData_DefinedTermBase drop constraint FK107321E2F4E35BCD [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "STATEDATA_DEFINEDTERMBASE" not found; SQL statement:
+alter table StateData_DefinedTermBase drop constraint FK107321E28E7BF9AB [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "STATEDATA_DEFINEDTERMBASE_AUD" not found; SQL statement:
+alter table StateData_DefinedTermBase_AUD drop constraint FK7C978EB334869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "STATEDATA_LANGUAGESTRING" not found; SQL statement:
+alter table StateData_LanguageString drop constraint FK93FFD2ADF05D08D4 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "STATEDATA_LANGUAGESTRING" not found; SQL statement:
+alter table StateData_LanguageString drop constraint FK93FFD2AD9682414B [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "STATEDATA_LANGUAGESTRING" not found; SQL statement:
+alter table StateData_LanguageString drop constraint FK93FFD2AD8E7BF9AB [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "STATEDATA_LANGUAGESTRING_AUD" not found; SQL statement:
+alter table StateData_LanguageString_AUD drop constraint FK1578E1FE34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "STATISTICALMEASUREMENTVALUE" not found; SQL statement:
+alter table StatisticalMeasurementValue drop constraint FK2DCE02904FF2DB2C [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "STATISTICALMEASUREMENTVALUE" not found; SQL statement:
+alter table StatisticalMeasurementValue drop constraint FK2DCE0290BC5DA539 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "STATISTICALMEASUREMENTVALUE" not found; SQL statement:
+alter table StatisticalMeasurementValue drop constraint FK2DCE029084A26F69 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "STATISTICALMEASUREMENTVALUE" not found; SQL statement:
+alter table StatisticalMeasurementValue drop constraint FK2DCE02904C428112 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "STATISTICALMEASUREMENTVALUE_AUD" not found; SQL statement:
+alter table StatisticalMeasurementValue_AUD drop constraint FKBB16686134869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "STATISTICALMEASUREMENTVALUE_DEFINEDTERMBASE" not found; SQL statement:
+alter table StatisticalMeasurementValue_DefinedTermBase drop constraint FK686C42B7F4E35BCD [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "STATISTICALMEASUREMENTVALUE_DEFINEDTERMBASE" not found; SQL statement:
+alter table StatisticalMeasurementValue_DefinedTermBase drop constraint FK686C42B75C9F4F2B [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "STATISTICALMEASUREMENTVALUE_DEFINEDTERMBASE_AUD" not found; SQL statement:
+alter table StatisticalMeasurementValue_DefinedTermBase_AUD drop constraint FKFEBA3D0834869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SYNONYMRELATIONSHIP" not found; SQL statement:
+alter table SynonymRelationship drop constraint FKF483ADB34FF2DB2C [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SYNONYMRELATIONSHIP" not found; SQL statement:
+alter table SynonymRelationship drop constraint FKF483ADB3BC5DA539 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SYNONYMRELATIONSHIP" not found; SQL statement:
+alter table SynonymRelationship drop constraint FKF483ADB3AEB7F3BE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SYNONYMRELATIONSHIP" not found; SQL statement:
+alter table SynonymRelationship drop constraint FKF483ADB34BAC703F [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SYNONYMRELATIONSHIP" not found; SQL statement:
+alter table SynonymRelationship drop constraint FKF483ADB3F8991B9D [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SYNONYMRELATIONSHIP" not found; SQL statement:
+alter table SynonymRelationship drop constraint FKF483ADB380924EEC [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SYNONYMRELATIONSHIP_AUD" not found; SQL statement:
+alter table SynonymRelationship_AUD drop constraint FK8AEBCA0434869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SYNONYMRELATIONSHIP_ANNOTATION" not found; SQL statement:
+alter table SynonymRelationship_Annotation drop constraint FKF494F15B1E403E0B [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SYNONYMRELATIONSHIP_ANNOTATION" not found; SQL statement:
+alter table SynonymRelationship_Annotation drop constraint FKF494F15B260A8379 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SYNONYMRELATIONSHIP_ANNOTATION_AUD" not found; SQL statement:
+alter table SynonymRelationship_Annotation_AUD drop constraint FKD3E2F9AC34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SYNONYMRELATIONSHIP_MARKER" not found; SQL statement:
+alter table SynonymRelationship_Marker drop constraint FK7A439066777265A1 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SYNONYMRELATIONSHIP_MARKER" not found; SQL statement:
+alter table SynonymRelationship_Marker drop constraint FK7A439066260A8379 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SYNONYMRELATIONSHIP_MARKER_AUD" not found; SQL statement:
+alter table SynonymRelationship_Marker_AUD drop constraint FK93C51B3734869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONBASE" not found; SQL statement:
+alter table TaxonBase drop constraint FK9249B49B4FF2DB2C [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONBASE" not found; SQL statement:
+alter table TaxonBase drop constraint FK9249B49BBC5DA539 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONBASE" not found; SQL statement:
+alter table TaxonBase drop constraint FK9249B49B8492378F [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONBASE" not found; SQL statement:
+alter table TaxonBase drop constraint FK9249B49B74FED214 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONBASE" not found; SQL statement:
+alter table TaxonBase drop constraint FK9249B49B7C7B5AED [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONBASE_AUD" not found; SQL statement:
+alter table TaxonBase_AUD drop constraint FK37041CEC34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONBASE_ANNOTATION" not found; SQL statement:
+alter table TaxonBase_Annotation drop constraint FK41ED09731E403E0B [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONBASE_ANNOTATION" not found; SQL statement:
+alter table TaxonBase_Annotation drop constraint FK41ED09739C9D39 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONBASE_ANNOTATION_AUD" not found; SQL statement:
+alter table TaxonBase_Annotation_AUD drop constraint FK8C145C434869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONBASE_CREDIT" not found; SQL statement:
+alter table TaxonBase_Credit drop constraint FK4CB48B3D32D1B9F [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONBASE_CREDIT" not found; SQL statement:
+alter table TaxonBase_Credit drop constraint FK4CB48B3D9C9D39 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONBASE_CREDIT_AUD" not found; SQL statement:
+alter table TaxonBase_Credit_AUD drop constraint FK7CFED28E34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONBASE_EXTENSION" not found; SQL statement:
+alter table TaxonBase_Extension drop constraint FKF961257B927DE9DF [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONBASE_EXTENSION" not found; SQL statement:
+alter table TaxonBase_Extension drop constraint FKF961257B9C9D39 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONBASE_EXTENSION_AUD" not found; SQL statement:
+alter table TaxonBase_Extension_AUD drop constraint FK71381DCC34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONBASE_IDENTIFIER" not found; SQL statement:
+alter table TaxonBase_Identifier drop constraint FK3E25CAEDE12073FF [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONBASE_IDENTIFIER" not found; SQL statement:
+alter table TaxonBase_Identifier drop constraint FK3E25CAED9C9D39 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONBASE_IDENTIFIER_AUD" not found; SQL statement:
+alter table TaxonBase_Identifier_AUD drop constraint FKCF68BA3E34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONBASE_MARKER" not found; SQL statement:
+alter table TaxonBase_Marker drop constraint FK5CDB747E777265A1 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONBASE_MARKER" not found; SQL statement:
+alter table TaxonBase_Marker drop constraint FK5CDB747E9C9D39 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONBASE_MARKER_AUD" not found; SQL statement:
+alter table TaxonBase_Marker_AUD drop constraint FKE11D334F34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONBASE_ORIGINALSOURCEBASE" not found; SQL statement:
+alter table TaxonBase_OriginalSourceBase drop constraint FKFB680C813A6735D9 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONBASE_ORIGINALSOURCEBASE" not found; SQL statement:
+alter table TaxonBase_OriginalSourceBase drop constraint FKFB680C819C9D39 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONBASE_ORIGINALSOURCEBASE_AUD" not found; SQL statement:
+alter table TaxonBase_OriginalSourceBase_AUD drop constraint FKB7C811D234869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONBASE_RIGHTSINFO" not found; SQL statement:
+alter table TaxonBase_RightsInfo drop constraint FK4CEDB569C13F7B21 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONBASE_RIGHTSINFO" not found; SQL statement:
+alter table TaxonBase_RightsInfo drop constraint FK4CEDB5699C9D39 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONBASE_RIGHTSINFO_AUD" not found; SQL statement:
+alter table TaxonBase_RightsInfo_AUD drop constraint FKAFF06BA34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONINTERACTION_LANGUAGESTRING" not found; SQL statement:
+alter table TaxonInteraction_LanguageString drop constraint FK579A1DC02BEBA58D [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONINTERACTION_LANGUAGESTRING" not found; SQL statement:
+alter table TaxonInteraction_LanguageString drop constraint FK579A1DC028459272 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONINTERACTION_LANGUAGESTRING" not found; SQL statement:
+alter table TaxonInteraction_LanguageString drop constraint FK579A1DC086C86FE0 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONINTERACTION_LANGUAGESTRING_AUD" not found; SQL statement:
+alter table TaxonInteraction_LanguageString_AUD drop constraint FK9E016B9134869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONNAMEBASE" not found; SQL statement:
+alter table TaxonNameBase drop constraint FKB4870C64FF2DB2C [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONNAMEBASE" not found; SQL statement:
+alter table TaxonNameBase drop constraint FKB4870C6BC5DA539 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONNAMEBASE" not found; SQL statement:
+alter table TaxonNameBase drop constraint FKB4870C6BFEAE500 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONNAMEBASE" not found; SQL statement:
+alter table TaxonNameBase drop constraint FKB4870C6617E62B3 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONNAMEBASE" not found; SQL statement:
+alter table TaxonNameBase drop constraint FKB4870C6D7BE55A0 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONNAMEBASE" not found; SQL statement:
+alter table TaxonNameBase drop constraint FKB4870C6FBFA5597 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONNAMEBASE" not found; SQL statement:
+alter table TaxonNameBase drop constraint FKB4870C681F5DBB0 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONNAMEBASE" not found; SQL statement:
+alter table TaxonNameBase drop constraint FKB4870C6503B46C4 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONNAMEBASE" not found; SQL statement:
+alter table TaxonNameBase drop constraint FKB4870C63357BF63 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONNAMEBASE_AUD" not found; SQL statement:
+alter table TaxonNameBase_AUD drop constraint FK5CA2CB9734869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONNAMEBASE_ANNOTATION" not found; SQL statement:
+alter table TaxonNameBase_Annotation drop constraint FK9E7794681E403E0B [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONNAMEBASE_ANNOTATION" not found; SQL statement:
+alter table TaxonNameBase_Annotation drop constraint FK9E7794688C85CF94 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONNAMEBASE_ANNOTATION_AUD" not found; SQL statement:
+alter table TaxonNameBase_Annotation_AUD drop constraint FKB6734E3934869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONNAMEBASE_CREDIT" not found; SQL statement:
+alter table TaxonNameBase_Credit drop constraint FK29BCD8B232D1B9F [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONNAMEBASE_CREDIT" not found; SQL statement:
+alter table TaxonNameBase_Credit drop constraint FK29BCD8B28C85CF94 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONNAMEBASE_CREDIT_AUD" not found; SQL statement:
+alter table TaxonNameBase_Credit_AUD drop constraint FKD9895D8334869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONNAMEBASE_EXTENSION" not found; SQL statement:
+alter table TaxonNameBase_Extension drop constraint FKC28EE7E6927DE9DF [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONNAMEBASE_EXTENSION" not found; SQL statement:
+alter table TaxonNameBase_Extension drop constraint FKC28EE7E68C85CF94 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONNAMEBASE_EXTENSION_AUD" not found; SQL statement:
+alter table TaxonNameBase_Extension_AUD drop constraint FK8F98B2B734869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONNAMEBASE_IDENTIFIER" not found; SQL statement:
+alter table TaxonNameBase_Identifier drop constraint FK9AB055E2E12073FF [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONNAMEBASE_IDENTIFIER" not found; SQL statement:
+alter table TaxonNameBase_Identifier drop constraint FK9AB055E28C85CF94 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONNAMEBASE_IDENTIFIER_AUD" not found; SQL statement:
+alter table TaxonNameBase_Identifier_AUD drop constraint FK7D1AC2B334869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONNAMEBASE_MARKER" not found; SQL statement:
+alter table TaxonNameBase_Marker drop constraint FK39E3C1F3777265A1 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONNAMEBASE_MARKER" not found; SQL statement:
+alter table TaxonNameBase_Marker drop constraint FK39E3C1F38C85CF94 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONNAMEBASE_MARKER_AUD" not found; SQL statement:
+alter table TaxonNameBase_Marker_AUD drop constraint FK3DA7BE4434869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONNAMEBASE_NOMENCLATURALSTATUS" not found; SQL statement:
+alter table TaxonNameBase_NomenclaturalStatus drop constraint FK560BA7926615E90D [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONNAMEBASE_NOMENCLATURALSTATUS" not found; SQL statement:
+alter table TaxonNameBase_NomenclaturalStatus drop constraint FK560BA7928C85CF94 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONNAMEBASE_NOMENCLATURALSTATUS_AUD" not found; SQL statement:
+alter table TaxonNameBase_NomenclaturalStatus_AUD drop constraint FK9215BC6334869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONNAMEBASE_ORIGINALSOURCEBASE" not found; SQL statement:
+alter table TaxonNameBase_OriginalSourceBase drop constraint FKF746D2763A6735D9 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONNAMEBASE_ORIGINALSOURCEBASE" not found; SQL statement:
+alter table TaxonNameBase_OriginalSourceBase drop constraint FKF746D2768C85CF94 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONNAMEBASE_ORIGINALSOURCEBASE_AUD" not found; SQL statement:
+alter table TaxonNameBase_OriginalSourceBase_AUD drop constraint FK7A38D54734869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONNAMEBASE_RIGHTSINFO" not found; SQL statement:
+alter table TaxonNameBase_RightsInfo drop constraint FKA978405EC13F7B21 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONNAMEBASE_RIGHTSINFO" not found; SQL statement:
+alter table TaxonNameBase_RightsInfo drop constraint FKA978405E8C85CF94 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONNAMEBASE_RIGHTSINFO_AUD" not found; SQL statement:
+alter table TaxonNameBase_RightsInfo_AUD drop constraint FKB8B10F2F34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONNAMEBASE_TYPEDESIGNATIONBASE" not found; SQL statement:
+alter table TaxonNameBase_TypeDesignationBase drop constraint FKC0D6BBB5C7DF530C [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONNAMEBASE_TYPEDESIGNATIONBASE" not found; SQL statement:
+alter table TaxonNameBase_TypeDesignationBase drop constraint FKC0D6BBB58C85CF94 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONNAMEBASE_TYPEDESIGNATIONBASE_AUD" not found; SQL statement:
+alter table TaxonNameBase_TypeDesignationBase_AUD drop constraint FKBB24070634869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONNODE" not found; SQL statement:
+alter table TaxonNode drop constraint FK924F5BCC4FF2DB2C [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONNODE" not found; SQL statement:
+alter table TaxonNode drop constraint FK924F5BCCBC5DA539 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONNODE" not found; SQL statement:
+alter table TaxonNode drop constraint FK924F5BCC84A3CE1B [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONNODE" not found; SQL statement:
+alter table TaxonNode drop constraint FK924F5BCC39DB2DFB [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONNODE" not found; SQL statement:
+alter table TaxonNode drop constraint FK924F5BCC381381B5 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONNODE" not found; SQL statement:
+alter table TaxonNode drop constraint FK924F5BCCCC05993E [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONNODE" not found; SQL statement:
+alter table TaxonNode drop constraint FK924F5BCCDE9A3E39 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONNODEAGENTRELATION" not found; SQL statement:
+alter table TaxonNodeAgentRelation drop constraint FK28D12BB54FF2DB2C [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONNODEAGENTRELATION" not found; SQL statement:
+alter table TaxonNodeAgentRelation drop constraint FK28D12BB5BC5DA539 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONNODEAGENTRELATION" not found; SQL statement:
+alter table TaxonNodeAgentRelation drop constraint FK28D12BB58EB3A8A1 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONNODEAGENTRELATION" not found; SQL statement:
+alter table TaxonNodeAgentRelation drop constraint FK28D12BB5927D8399 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONNODEAGENTRELATION" not found; SQL statement:
+alter table TaxonNodeAgentRelation drop constraint FK28D12BB5E67FC44F [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONNODEAGENTRELATION_AUD" not found; SQL statement:
+alter table TaxonNodeAgentRelation_AUD drop constraint FKC066770634869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONNODEAGENTRELATION_ANNOTATION" not found; SQL statement:
+alter table TaxonNodeAgentRelation_Annotation drop constraint FK7CEFFE191E403E0B [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONNODEAGENTRELATION_ANNOTATION" not found; SQL statement:
+alter table TaxonNodeAgentRelation_Annotation drop constraint FK7CEFFE193F9CAA9B [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONNODEAGENTRELATION_ANNOTATION_AUD" not found; SQL statement:
+alter table TaxonNodeAgentRelation_Annotation_AUD drop constraint FK6A4D776A34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONNODEAGENTRELATION_MARKER" not found; SQL statement:
+alter table TaxonNodeAgentRelation_Marker drop constraint FKE92EAC24777265A1 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONNODEAGENTRELATION_MARKER" not found; SQL statement:
+alter table TaxonNodeAgentRelation_Marker drop constraint FKE92EAC243F9CAA9B [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONNODEAGENTRELATION_MARKER_AUD" not found; SQL statement:
+alter table TaxonNodeAgentRelation_Marker_AUD drop constraint FK1C2027F534869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONNODE_AUD" not found; SQL statement:
+alter table TaxonNode_AUD drop constraint FKE090C39D34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONNODE_ANNOTATION" not found; SQL statement:
+alter table TaxonNode_Annotation drop constraint FKD8A9A9A21E403E0B [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONNODE_ANNOTATION" not found; SQL statement:
+alter table TaxonNode_Annotation drop constraint FKD8A9A9A2927D8399 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONNODE_ANNOTATION_AUD" not found; SQL statement:
+alter table TaxonNode_Annotation_AUD drop constraint FKB2C4367334869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONNODE_MARKER" not found; SQL statement:
+alter table TaxonNode_Marker drop constraint FK395842D777265A1 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONNODE_MARKER" not found; SQL statement:
+alter table TaxonNode_Marker drop constraint FK395842D927D8399 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONNODE_MARKER_AUD" not found; SQL statement:
+alter table TaxonNode_Marker_AUD drop constraint FK77D9D37E34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONRELATIONSHIP" not found; SQL statement:
+alter table TaxonRelationship drop constraint FK7482BA024FF2DB2C [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONRELATIONSHIP" not found; SQL statement:
+alter table TaxonRelationship drop constraint FK7482BA02BC5DA539 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONRELATIONSHIP" not found; SQL statement:
+alter table TaxonRelationship drop constraint FK7482BA02AEB7F3BE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONRELATIONSHIP" not found; SQL statement:
+alter table TaxonRelationship drop constraint FK7482BA02E71EF6CE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONRELATIONSHIP" not found; SQL statement:
+alter table TaxonRelationship drop constraint FK7482BA02F8991B9D [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONRELATIONSHIP" not found; SQL statement:
+alter table TaxonRelationship drop constraint FK7482BA02F11BD77B [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONRELATIONSHIP_AUD" not found; SQL statement:
+alter table TaxonRelationship_AUD drop constraint FKA0DE16D334869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONRELATIONSHIP_ANNOTATION" not found; SQL statement:
+alter table TaxonRelationship_Annotation drop constraint FK82C86DAC1E403E0B [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONRELATIONSHIP_ANNOTATION" not found; SQL statement:
+alter table TaxonRelationship_Annotation drop constraint FK82C86DAC2BD180D9 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONRELATIONSHIP_ANNOTATION_AUD" not found; SQL statement:
+alter table TaxonRelationship_Annotation_AUD drop constraint FKE86DE57D34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONRELATIONSHIP_MARKER" not found; SQL statement:
+alter table TaxonRelationship_Marker drop constraint FK69FBDD37777265A1 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONRELATIONSHIP_MARKER" not found; SQL statement:
+alter table TaxonRelationship_Marker drop constraint FK69FBDD372BD180D9 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONRELATIONSHIP_MARKER_AUD" not found; SQL statement:
+alter table TaxonRelationship_Marker_AUD drop constraint FK21F8978834869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TERMVOCABULARY" not found; SQL statement:
+alter table TermVocabulary drop constraint FK487AA6924FF2DB2C [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TERMVOCABULARY" not found; SQL statement:
+alter table TermVocabulary drop constraint FK487AA692BC5DA539 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TERMVOCABULARY_AUD" not found; SQL statement:
+alter table TermVocabulary_AUD drop constraint FKA6ED3B6334869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TERMVOCABULARY_ANNOTATION" not found; SQL statement:
+alter table TermVocabulary_Annotation drop constraint FK76D2071C1E403E0B [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TERMVOCABULARY_ANNOTATION" not found; SQL statement:
+alter table TermVocabulary_Annotation drop constraint FK76D2071C258E060 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TERMVOCABULARY_ANNOTATION_AUD" not found; SQL statement:
+alter table TermVocabulary_Annotation_AUD drop constraint FK222D46ED34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TERMVOCABULARY_CREDIT" not found; SQL statement:
+alter table TermVocabulary_Credit drop constraint FK7604C56632D1B9F [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TERMVOCABULARY_CREDIT" not found; SQL statement:
+alter table TermVocabulary_Credit drop constraint FK7604C566258E060 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TERMVOCABULARY_CREDIT_AUD" not found; SQL statement:
+alter table TermVocabulary_Credit_AUD drop constraint FKB1E3D03734869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TERMVOCABULARY_EXTENSION" not found; SQL statement:
+alter table TermVocabulary_Extension drop constraint FKA8814EB2927DE9DF [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TERMVOCABULARY_EXTENSION" not found; SQL statement:
+alter table TermVocabulary_Extension drop constraint FKA8814EB2258E060 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TERMVOCABULARY_EXTENSION_AUD" not found; SQL statement:
+alter table TermVocabulary_Extension_AUD drop constraint FKD522D38334869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TERMVOCABULARY_IDENTIFIER" not found; SQL statement:
+alter table TermVocabulary_Identifier drop constraint FK730AC896E12073FF [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TERMVOCABULARY_IDENTIFIER" not found; SQL statement:
+alter table TermVocabulary_Identifier drop constraint FK730AC896258E060 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TERMVOCABULARY_IDENTIFIER_AUD" not found; SQL statement:
+alter table TermVocabulary_Identifier_AUD drop constraint FKE8D4BB6734869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TERMVOCABULARY_MARKER" not found; SQL statement:
+alter table TermVocabulary_Marker drop constraint FK862BAEA7777265A1 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TERMVOCABULARY_MARKER" not found; SQL statement:
+alter table TermVocabulary_Marker drop constraint FK862BAEA7258E060 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TERMVOCABULARY_MARKER_AUD" not found; SQL statement:
+alter table TermVocabulary_Marker_AUD drop constraint FK160230F834869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TERMVOCABULARY_ORIGINALSOURCEBASE" not found; SQL statement:
+alter table TermVocabulary_OriginalSourceBase drop constraint FK8F2D512A3A6735D9 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TERMVOCABULARY_ORIGINALSOURCEBASE" not found; SQL statement:
+alter table TermVocabulary_OriginalSourceBase drop constraint FK8F2D512A258E060 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TERMVOCABULARY_ORIGINALSOURCEBASE_AUD" not found; SQL statement:
+alter table TermVocabulary_OriginalSourceBase_AUD drop constraint FKA898D9FB34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TERMVOCABULARY_REPRESENTATION" not found; SQL statement:
+alter table TermVocabulary_Representation drop constraint FKA408B63AB31C4747 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TERMVOCABULARY_REPRESENTATION" not found; SQL statement:
+alter table TermVocabulary_Representation drop constraint FKA408B63A258E060 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TERMVOCABULARY_REPRESENTATION_AUD" not found; SQL statement:
+alter table TermVocabulary_Representation_AUD drop constraint FK681B370B34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TERMVOCABULARY_RIGHTSINFO" not found; SQL statement:
+alter table TermVocabulary_RightsInfo drop constraint FK81D2B312C13F7B21 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TERMVOCABULARY_RIGHTSINFO" not found; SQL statement:
+alter table TermVocabulary_RightsInfo drop constraint FK81D2B312258E060 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TERMVOCABULARY_RIGHTSINFO_AUD" not found; SQL statement:
+alter table TermVocabulary_RightsInfo_AUD drop constraint FK246B07E334869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TYPEDESIGNATIONBASE" not found; SQL statement:
+alter table TypeDesignationBase drop constraint FK8AC9DCAE4FF2DB2C [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TYPEDESIGNATIONBASE" not found; SQL statement:
+alter table TypeDesignationBase drop constraint FK8AC9DCAEBC5DA539 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TYPEDESIGNATIONBASE" not found; SQL statement:
+alter table TypeDesignationBase drop constraint FK8AC9DCAEAEB7F3BE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TYPEDESIGNATIONBASE" not found; SQL statement:
+alter table TypeDesignationBase drop constraint FK8AC9DCAE9E3ED08 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TYPEDESIGNATIONBASE" not found; SQL statement:
+alter table TypeDesignationBase drop constraint FK8AC9DCAE4CB0F315 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TYPEDESIGNATIONBASE" not found; SQL statement:
+alter table TypeDesignationBase drop constraint FK8AC9DCAEFBFA41D9 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TYPEDESIGNATIONBASE_AUD" not found; SQL statement:
+alter table TypeDesignationBase_AUD drop constraint FK243C037F34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TYPEDESIGNATIONBASE_ANNOTATION" not found; SQL statement:
+alter table TypeDesignationBase_Annotation drop constraint FK4D7327801E403E0B [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TYPEDESIGNATIONBASE_ANNOTATION" not found; SQL statement:
+alter table TypeDesignationBase_Annotation drop constraint FK4D73278044E9E6D4 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TYPEDESIGNATIONBASE_ANNOTATION_AUD" not found; SQL statement:
+alter table TypeDesignationBase_Annotation_AUD drop constraint FK88BF955134869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TYPEDESIGNATIONBASE_MARKER" not found; SQL statement:
+alter table TypeDesignationBase_Marker drop constraint FKB914A10B777265A1 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TYPEDESIGNATIONBASE_MARKER" not found; SQL statement:
+alter table TypeDesignationBase_Marker drop constraint FKB914A10B44E9E6D4 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TYPEDESIGNATIONBASE_MARKER_AUD" not found; SQL statement:
+alter table TypeDesignationBase_Marker_AUD drop constraint FKECA3515C34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "USERACCOUNT" not found; SQL statement:
+alter table UserAccount drop constraint FKB3F13C24FF2DB2C [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "USERACCOUNT" not found; SQL statement:
+alter table UserAccount drop constraint FKB3F13C2AAC1B820 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "USERACCOUNT_AUD" not found; SQL statement:
+alter table UserAccount_AUD drop constraint FK6A57909334869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "USERACCOUNT_GRANTEDAUTHORITYIMPL" not found; SQL statement:
+alter table UserAccount_GrantedAuthorityImpl drop constraint FKFD724D851857F6C2 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "USERACCOUNT_GRANTEDAUTHORITYIMPL" not found; SQL statement:
+alter table UserAccount_GrantedAuthorityImpl drop constraint FKFD724D855EA5DD89 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "USERACCOUNT_PERMISSIONGROUP" not found; SQL statement:
+alter table UserAccount_PermissionGroup drop constraint FK812DE753DA9DCB5F [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "USERACCOUNT_PERMISSIONGROUP" not found; SQL statement:
+alter table UserAccount_PermissionGroup drop constraint FK812DE753887E3D12 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "WORKINGSET" not found; SQL statement:
+alter table WorkingSet drop constraint FK668D5B914FF2DB2C [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "WORKINGSET" not found; SQL statement:
+alter table WorkingSet drop constraint FK668D5B91BC5DA539 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "WORKINGSET" not found; SQL statement:
+alter table WorkingSet drop constraint FK668D5B9123DB7F04 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "WORKINGSET_AUD" not found; SQL statement:
+alter table WorkingSet_AUD drop constraint FK628F58E234869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "WORKINGSET_ANNOTATION" not found; SQL statement:
+alter table WorkingSet_Annotation drop constraint FKCBBA8CBD1E403E0B [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "WORKINGSET_ANNOTATION" not found; SQL statement:
+alter table WorkingSet_Annotation drop constraint FKCBBA8CBDBBD2C869 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "WORKINGSET_ANNOTATION_AUD" not found; SQL statement:
+alter table WorkingSet_Annotation_AUD drop constraint FK1E28140E34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "WORKINGSET_DESCRIPTIONBASE" not found; SQL statement:
+alter table WorkingSet_DescriptionBase drop constraint FK731CC81F33B8A841 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "WORKINGSET_DESCRIPTIONBASE" not found; SQL statement:
+alter table WorkingSet_DescriptionBase drop constraint FK731CC81FBBD2C869 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "WORKINGSET_DESCRIPTIONBASE_AUD" not found; SQL statement:
+alter table WorkingSet_DescriptionBase_AUD drop constraint FK8959CE7034869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "WORKINGSET_MARKER" not found; SQL statement:
+alter table WorkingSet_Marker drop constraint FK9CB22CC8777265A1 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "WORKINGSET_MARKER" not found; SQL statement:
+alter table WorkingSet_Marker drop constraint FK9CB22CC8BBD2C869 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "WORKINGSET_MARKER_AUD" not found; SQL statement:
+alter table WorkingSet_Marker_AUD drop constraint FK6AEAB69934869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "WORKINGSET_REPRESENTATION" not found; SQL statement:
+alter table WorkingSet_Representation drop constraint FKA003835BB31C4747 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "WORKINGSET_REPRESENTATION" not found; SQL statement:
+alter table WorkingSet_Representation drop constraint FKA003835BBBD2C869 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "WORKINGSET_REPRESENTATION_AUD" not found; SQL statement:
+alter table WorkingSet_Representation_AUD drop constraint FK21B88BAC34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "WORKINGSET_TAXONBASE" not found; SQL statement:
+alter table WorkingSet_TaxonBase drop constraint FK34EB896D7C3D0017 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "WORKINGSET_TAXONBASE" not found; SQL statement:
+alter table WorkingSet_TaxonBase drop constraint FK34EB896DB4555A9A [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "WORKINGSET_TAXONBASE_AUD" not found; SQL statement:
+alter table WorkingSet_TaxonBase_AUD drop constraint FK582B38BE34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Constraint "_UNIQUEKEY" already exists; SQL statement:
+alter table AgentBase add constraint _UniqueKey unique (uuid) [90045-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.command.ddl.AlterTableAddConstraint.tryUpdate(AlterTableAddConstraint.java:89)
+ at org.h2.command.ddl.AlterTableAddConstraint.update(AlterTableAddConstraint.java:68)
+ at org.h2.command.CommandContainer.update(CommandContainer.java:75)
+ at org.h2.command.Command.executeUpdate(Command.java:230)
+ at org.h2.jdbc.JdbcStatement.executeUpdateInternal(JdbcStatement.java:125)
+ at org.h2.jdbc.JdbcStatement.executeUpdate(JdbcStatement.java:110)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.hibernate.tool.hbm2ddl.DatabaseExporter.export(DatabaseExporter.java:64)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.perform(SchemaExport.java:418)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.execute(SchemaExport.java:375)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:304)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:293)
+ at org.hibernate.internal.SessionFactoryImpl.<init>(SessionFactoryImpl.java:498)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1743)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1781)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBuilder.buildSessionFactory(LocalSessionFactoryBuilder.java:247)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.buildSessionFactory(LocalSessionFactoryBean.java:373)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.afterPropertiesSet(LocalSessionFactoryBean.java:358)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1547)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1485)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:524)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:323)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:107)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1393)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1134)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:522)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:626)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.preInstantiateSingletons(MonitoredListableBeanFactory.java:71)
+ at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:932)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.finishBeanFactoryInitialization(MonitoredGenericApplicationContext.java:74)
+ at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:479)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.refresh(MonitoredGenericApplicationContext.java:102)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.setNewDataSource(CdmApplicationController.java:264)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.<init>(CdmApplicationController.java:204)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.NewInstance(CdmApplicationController.java:148)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.getApplicationController(CdmStoreConnector.java:151)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.run(CdmStoreConnector.java:99)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Constraint "_UNIQUEKEY" already exists; SQL statement:
+alter table Amplification add constraint _UniqueKey unique (uuid) [90045-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.command.ddl.AlterTableAddConstraint.tryUpdate(AlterTableAddConstraint.java:89)
+ at org.h2.command.ddl.AlterTableAddConstraint.update(AlterTableAddConstraint.java:68)
+ at org.h2.command.CommandContainer.update(CommandContainer.java:75)
+ at org.h2.command.Command.executeUpdate(Command.java:230)
+ at org.h2.jdbc.JdbcStatement.executeUpdateInternal(JdbcStatement.java:125)
+ at org.h2.jdbc.JdbcStatement.executeUpdate(JdbcStatement.java:110)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.hibernate.tool.hbm2ddl.DatabaseExporter.export(DatabaseExporter.java:64)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.perform(SchemaExport.java:418)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.execute(SchemaExport.java:375)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:304)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:293)
+ at org.hibernate.internal.SessionFactoryImpl.<init>(SessionFactoryImpl.java:498)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1743)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1781)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBuilder.buildSessionFactory(LocalSessionFactoryBuilder.java:247)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.buildSessionFactory(LocalSessionFactoryBean.java:373)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.afterPropertiesSet(LocalSessionFactoryBean.java:358)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1547)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1485)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:524)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:323)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:107)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1393)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1134)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:522)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:626)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.preInstantiateSingletons(MonitoredListableBeanFactory.java:71)
+ at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:932)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.finishBeanFactoryInitialization(MonitoredGenericApplicationContext.java:74)
+ at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:479)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.refresh(MonitoredGenericApplicationContext.java:102)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.setNewDataSource(CdmApplicationController.java:264)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.<init>(CdmApplicationController.java:204)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.NewInstance(CdmApplicationController.java:148)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.getApplicationController(CdmStoreConnector.java:151)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.run(CdmStoreConnector.java:99)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Constraint "_UNIQUEKEY" already exists; SQL statement:
+alter table AmplificationResult add constraint _UniqueKey unique (uuid) [90045-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.command.ddl.AlterTableAddConstraint.tryUpdate(AlterTableAddConstraint.java:89)
+ at org.h2.command.ddl.AlterTableAddConstraint.update(AlterTableAddConstraint.java:68)
+ at org.h2.command.CommandContainer.update(CommandContainer.java:75)
+ at org.h2.command.Command.executeUpdate(Command.java:230)
+ at org.h2.jdbc.JdbcStatement.executeUpdateInternal(JdbcStatement.java:125)
+ at org.h2.jdbc.JdbcStatement.executeUpdate(JdbcStatement.java:110)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.hibernate.tool.hbm2ddl.DatabaseExporter.export(DatabaseExporter.java:64)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.perform(SchemaExport.java:418)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.execute(SchemaExport.java:375)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:304)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:293)
+ at org.hibernate.internal.SessionFactoryImpl.<init>(SessionFactoryImpl.java:498)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1743)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1781)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBuilder.buildSessionFactory(LocalSessionFactoryBuilder.java:247)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.buildSessionFactory(LocalSessionFactoryBean.java:373)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.afterPropertiesSet(LocalSessionFactoryBean.java:358)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1547)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1485)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:524)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:323)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:107)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1393)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1134)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:522)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:626)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.preInstantiateSingletons(MonitoredListableBeanFactory.java:71)
+ at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:932)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.finishBeanFactoryInitialization(MonitoredGenericApplicationContext.java:74)
+ at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:479)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.refresh(MonitoredGenericApplicationContext.java:102)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.setNewDataSource(CdmApplicationController.java:264)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.<init>(CdmApplicationController.java:204)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.NewInstance(CdmApplicationController.java:148)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.getApplicationController(CdmStoreConnector.java:151)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.run(CdmStoreConnector.java:99)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Constraint "_UNIQUEKEY" already exists; SQL statement:
+alter table Annotation add constraint _UniqueKey unique (uuid) [90045-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.command.ddl.AlterTableAddConstraint.tryUpdate(AlterTableAddConstraint.java:89)
+ at org.h2.command.ddl.AlterTableAddConstraint.update(AlterTableAddConstraint.java:68)
+ at org.h2.command.CommandContainer.update(CommandContainer.java:75)
+ at org.h2.command.Command.executeUpdate(Command.java:230)
+ at org.h2.jdbc.JdbcStatement.executeUpdateInternal(JdbcStatement.java:125)
+ at org.h2.jdbc.JdbcStatement.executeUpdate(JdbcStatement.java:110)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.hibernate.tool.hbm2ddl.DatabaseExporter.export(DatabaseExporter.java:64)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.perform(SchemaExport.java:418)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.execute(SchemaExport.java:375)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:304)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:293)
+ at org.hibernate.internal.SessionFactoryImpl.<init>(SessionFactoryImpl.java:498)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1743)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1781)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBuilder.buildSessionFactory(LocalSessionFactoryBuilder.java:247)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.buildSessionFactory(LocalSessionFactoryBean.java:373)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.afterPropertiesSet(LocalSessionFactoryBean.java:358)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1547)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1485)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:524)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:323)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:107)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1393)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1134)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:522)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:626)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.preInstantiateSingletons(MonitoredListableBeanFactory.java:71)
+ at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:932)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.finishBeanFactoryInitialization(MonitoredGenericApplicationContext.java:74)
+ at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:479)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.refresh(MonitoredGenericApplicationContext.java:102)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.setNewDataSource(CdmApplicationController.java:264)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.<init>(CdmApplicationController.java:204)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.NewInstance(CdmApplicationController.java:148)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.getApplicationController(CdmStoreConnector.java:151)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.run(CdmStoreConnector.java:99)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Constraint "_UNIQUEKEY" already exists; SQL statement:
+alter table CdmMetaData add constraint _UniqueKey unique (uuid) [90045-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.command.ddl.AlterTableAddConstraint.tryUpdate(AlterTableAddConstraint.java:89)
+ at org.h2.command.ddl.AlterTableAddConstraint.update(AlterTableAddConstraint.java:68)
+ at org.h2.command.CommandContainer.update(CommandContainer.java:75)
+ at org.h2.command.Command.executeUpdate(Command.java:230)
+ at org.h2.jdbc.JdbcStatement.executeUpdateInternal(JdbcStatement.java:125)
+ at org.h2.jdbc.JdbcStatement.executeUpdate(JdbcStatement.java:110)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.hibernate.tool.hbm2ddl.DatabaseExporter.export(DatabaseExporter.java:64)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.perform(SchemaExport.java:418)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.execute(SchemaExport.java:375)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:304)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:293)
+ at org.hibernate.internal.SessionFactoryImpl.<init>(SessionFactoryImpl.java:498)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1743)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1781)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBuilder.buildSessionFactory(LocalSessionFactoryBuilder.java:247)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.buildSessionFactory(LocalSessionFactoryBean.java:373)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.afterPropertiesSet(LocalSessionFactoryBean.java:358)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1547)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1485)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:524)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:323)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:107)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1393)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1134)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:522)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:626)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.preInstantiateSingletons(MonitoredListableBeanFactory.java:71)
+ at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:932)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.finishBeanFactoryInitialization(MonitoredGenericApplicationContext.java:74)
+ at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:479)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.refresh(MonitoredGenericApplicationContext.java:102)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.setNewDataSource(CdmApplicationController.java:264)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.<init>(CdmApplicationController.java:204)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.NewInstance(CdmApplicationController.java:148)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.getApplicationController(CdmStoreConnector.java:151)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.run(CdmStoreConnector.java:99)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Constraint "_UNIQUEKEY" already exists; SQL statement:
+alter table Classification add constraint _UniqueKey unique (uuid) [90045-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.command.ddl.AlterTableAddConstraint.tryUpdate(AlterTableAddConstraint.java:89)
+ at org.h2.command.ddl.AlterTableAddConstraint.update(AlterTableAddConstraint.java:68)
+ at org.h2.command.CommandContainer.update(CommandContainer.java:75)
+ at org.h2.command.Command.executeUpdate(Command.java:230)
+ at org.h2.jdbc.JdbcStatement.executeUpdateInternal(JdbcStatement.java:125)
+ at org.h2.jdbc.JdbcStatement.executeUpdate(JdbcStatement.java:110)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.hibernate.tool.hbm2ddl.DatabaseExporter.export(DatabaseExporter.java:64)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.perform(SchemaExport.java:418)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.execute(SchemaExport.java:375)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:304)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:293)
+ at org.hibernate.internal.SessionFactoryImpl.<init>(SessionFactoryImpl.java:498)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1743)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1781)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBuilder.buildSessionFactory(LocalSessionFactoryBuilder.java:247)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.buildSessionFactory(LocalSessionFactoryBean.java:373)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.afterPropertiesSet(LocalSessionFactoryBean.java:358)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1547)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1485)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:524)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:323)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:107)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1393)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1134)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:522)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:626)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.preInstantiateSingletons(MonitoredListableBeanFactory.java:71)
+ at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:932)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.finishBeanFactoryInitialization(MonitoredGenericApplicationContext.java:74)
+ at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:479)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.refresh(MonitoredGenericApplicationContext.java:102)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.setNewDataSource(CdmApplicationController.java:264)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.<init>(CdmApplicationController.java:204)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.NewInstance(CdmApplicationController.java:148)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.getApplicationController(CdmStoreConnector.java:151)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.run(CdmStoreConnector.java:99)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Constraint "_UNIQUEKEY" already exists; SQL statement:
+alter table Collection add constraint _UniqueKey unique (uuid) [90045-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.command.ddl.AlterTableAddConstraint.tryUpdate(AlterTableAddConstraint.java:89)
+ at org.h2.command.ddl.AlterTableAddConstraint.update(AlterTableAddConstraint.java:68)
+ at org.h2.command.CommandContainer.update(CommandContainer.java:75)
+ at org.h2.command.Command.executeUpdate(Command.java:230)
+ at org.h2.jdbc.JdbcStatement.executeUpdateInternal(JdbcStatement.java:125)
+ at org.h2.jdbc.JdbcStatement.executeUpdate(JdbcStatement.java:110)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.hibernate.tool.hbm2ddl.DatabaseExporter.export(DatabaseExporter.java:64)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.perform(SchemaExport.java:418)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.execute(SchemaExport.java:375)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:304)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:293)
+ at org.hibernate.internal.SessionFactoryImpl.<init>(SessionFactoryImpl.java:498)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1743)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1781)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBuilder.buildSessionFactory(LocalSessionFactoryBuilder.java:247)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.buildSessionFactory(LocalSessionFactoryBean.java:373)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.afterPropertiesSet(LocalSessionFactoryBean.java:358)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1547)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1485)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:524)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:323)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:107)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1393)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1134)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:522)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:626)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.preInstantiateSingletons(MonitoredListableBeanFactory.java:71)
+ at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:932)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.finishBeanFactoryInitialization(MonitoredGenericApplicationContext.java:74)
+ at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:479)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.refresh(MonitoredGenericApplicationContext.java:102)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.setNewDataSource(CdmApplicationController.java:264)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.<init>(CdmApplicationController.java:204)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.NewInstance(CdmApplicationController.java:148)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.getApplicationController(CdmStoreConnector.java:151)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.run(CdmStoreConnector.java:99)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Constraint "_UNIQUEKEY" already exists; SQL statement:
+alter table Credit add constraint _UniqueKey unique (uuid) [90045-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.command.ddl.AlterTableAddConstraint.tryUpdate(AlterTableAddConstraint.java:89)
+ at org.h2.command.ddl.AlterTableAddConstraint.update(AlterTableAddConstraint.java:68)
+ at org.h2.command.CommandContainer.update(CommandContainer.java:75)
+ at org.h2.command.Command.executeUpdate(Command.java:230)
+ at org.h2.jdbc.JdbcStatement.executeUpdateInternal(JdbcStatement.java:125)
+ at org.h2.jdbc.JdbcStatement.executeUpdate(JdbcStatement.java:110)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.hibernate.tool.hbm2ddl.DatabaseExporter.export(DatabaseExporter.java:64)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.perform(SchemaExport.java:418)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.execute(SchemaExport.java:375)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:304)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:293)
+ at org.hibernate.internal.SessionFactoryImpl.<init>(SessionFactoryImpl.java:498)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1743)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1781)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBuilder.buildSessionFactory(LocalSessionFactoryBuilder.java:247)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.buildSessionFactory(LocalSessionFactoryBean.java:373)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.afterPropertiesSet(LocalSessionFactoryBean.java:358)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1547)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1485)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:524)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:323)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:107)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1393)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1134)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:522)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:626)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.preInstantiateSingletons(MonitoredListableBeanFactory.java:71)
+ at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:932)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.finishBeanFactoryInitialization(MonitoredGenericApplicationContext.java:74)
+ at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:479)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.refresh(MonitoredGenericApplicationContext.java:102)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.setNewDataSource(CdmApplicationController.java:264)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.<init>(CdmApplicationController.java:204)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.NewInstance(CdmApplicationController.java:148)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.getApplicationController(CdmStoreConnector.java:151)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.run(CdmStoreConnector.java:99)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Constraint "_UNIQUEKEY" already exists; SQL statement:
+alter table DefinedTermBase add constraint _UniqueKey unique (uuid) [90045-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.command.ddl.AlterTableAddConstraint.tryUpdate(AlterTableAddConstraint.java:89)
+ at org.h2.command.ddl.AlterTableAddConstraint.update(AlterTableAddConstraint.java:68)
+ at org.h2.command.CommandContainer.update(CommandContainer.java:75)
+ at org.h2.command.Command.executeUpdate(Command.java:230)
+ at org.h2.jdbc.JdbcStatement.executeUpdateInternal(JdbcStatement.java:125)
+ at org.h2.jdbc.JdbcStatement.executeUpdate(JdbcStatement.java:110)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.hibernate.tool.hbm2ddl.DatabaseExporter.export(DatabaseExporter.java:64)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.perform(SchemaExport.java:418)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.execute(SchemaExport.java:375)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:304)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:293)
+ at org.hibernate.internal.SessionFactoryImpl.<init>(SessionFactoryImpl.java:498)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1743)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1781)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBuilder.buildSessionFactory(LocalSessionFactoryBuilder.java:247)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.buildSessionFactory(LocalSessionFactoryBean.java:373)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.afterPropertiesSet(LocalSessionFactoryBean.java:358)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1547)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1485)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:524)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:323)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:107)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1393)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1134)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:522)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:626)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.preInstantiateSingletons(MonitoredListableBeanFactory.java:71)
+ at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:932)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.finishBeanFactoryInitialization(MonitoredGenericApplicationContext.java:74)
+ at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:479)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.refresh(MonitoredGenericApplicationContext.java:102)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.setNewDataSource(CdmApplicationController.java:264)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.<init>(CdmApplicationController.java:204)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.NewInstance(CdmApplicationController.java:148)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.getApplicationController(CdmStoreConnector.java:151)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.run(CdmStoreConnector.java:99)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Constraint "_UNIQUEKEY" already exists; SQL statement:
+alter table DerivationEvent add constraint _UniqueKey unique (uuid) [90045-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.command.ddl.AlterTableAddConstraint.tryUpdate(AlterTableAddConstraint.java:89)
+ at org.h2.command.ddl.AlterTableAddConstraint.update(AlterTableAddConstraint.java:68)
+ at org.h2.command.CommandContainer.update(CommandContainer.java:75)
+ at org.h2.command.Command.executeUpdate(Command.java:230)
+ at org.h2.jdbc.JdbcStatement.executeUpdateInternal(JdbcStatement.java:125)
+ at org.h2.jdbc.JdbcStatement.executeUpdate(JdbcStatement.java:110)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.hibernate.tool.hbm2ddl.DatabaseExporter.export(DatabaseExporter.java:64)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.perform(SchemaExport.java:418)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.execute(SchemaExport.java:375)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:304)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:293)
+ at org.hibernate.internal.SessionFactoryImpl.<init>(SessionFactoryImpl.java:498)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1743)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1781)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBuilder.buildSessionFactory(LocalSessionFactoryBuilder.java:247)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.buildSessionFactory(LocalSessionFactoryBean.java:373)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.afterPropertiesSet(LocalSessionFactoryBean.java:358)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1547)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1485)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:524)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:323)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:107)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1393)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1134)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:522)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:626)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.preInstantiateSingletons(MonitoredListableBeanFactory.java:71)
+ at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:932)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.finishBeanFactoryInitialization(MonitoredGenericApplicationContext.java:74)
+ at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:479)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.refresh(MonitoredGenericApplicationContext.java:102)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.setNewDataSource(CdmApplicationController.java:264)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.<init>(CdmApplicationController.java:204)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.NewInstance(CdmApplicationController.java:148)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.getApplicationController(CdmStoreConnector.java:151)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.run(CdmStoreConnector.java:99)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Constraint "_UNIQUEKEY" already exists; SQL statement:
+alter table DescriptionBase add constraint _UniqueKey unique (uuid) [90045-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.command.ddl.AlterTableAddConstraint.tryUpdate(AlterTableAddConstraint.java:89)
+ at org.h2.command.ddl.AlterTableAddConstraint.update(AlterTableAddConstraint.java:68)
+ at org.h2.command.CommandContainer.update(CommandContainer.java:75)
+ at org.h2.command.Command.executeUpdate(Command.java:230)
+ at org.h2.jdbc.JdbcStatement.executeUpdateInternal(JdbcStatement.java:125)
+ at org.h2.jdbc.JdbcStatement.executeUpdate(JdbcStatement.java:110)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.hibernate.tool.hbm2ddl.DatabaseExporter.export(DatabaseExporter.java:64)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.perform(SchemaExport.java:418)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.execute(SchemaExport.java:375)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:304)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:293)
+ at org.hibernate.internal.SessionFactoryImpl.<init>(SessionFactoryImpl.java:498)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1743)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1781)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBuilder.buildSessionFactory(LocalSessionFactoryBuilder.java:247)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.buildSessionFactory(LocalSessionFactoryBean.java:373)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.afterPropertiesSet(LocalSessionFactoryBean.java:358)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1547)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1485)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:524)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:323)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:107)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1393)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1134)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:522)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:626)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.preInstantiateSingletons(MonitoredListableBeanFactory.java:71)
+ at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:932)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.finishBeanFactoryInitialization(MonitoredGenericApplicationContext.java:74)
+ at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:479)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.refresh(MonitoredGenericApplicationContext.java:102)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.setNewDataSource(CdmApplicationController.java:264)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.<init>(CdmApplicationController.java:204)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.NewInstance(CdmApplicationController.java:148)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.getApplicationController(CdmStoreConnector.java:151)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.run(CdmStoreConnector.java:99)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Constraint "_UNIQUEKEY" already exists; SQL statement:
+alter table DescriptionElementBase add constraint _UniqueKey unique (uuid) [90045-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.command.ddl.AlterTableAddConstraint.tryUpdate(AlterTableAddConstraint.java:89)
+ at org.h2.command.ddl.AlterTableAddConstraint.update(AlterTableAddConstraint.java:68)
+ at org.h2.command.CommandContainer.update(CommandContainer.java:75)
+ at org.h2.command.Command.executeUpdate(Command.java:230)
+ at org.h2.jdbc.JdbcStatement.executeUpdateInternal(JdbcStatement.java:125)
+ at org.h2.jdbc.JdbcStatement.executeUpdate(JdbcStatement.java:110)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.hibernate.tool.hbm2ddl.DatabaseExporter.export(DatabaseExporter.java:64)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.perform(SchemaExport.java:418)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.execute(SchemaExport.java:375)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:304)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:293)
+ at org.hibernate.internal.SessionFactoryImpl.<init>(SessionFactoryImpl.java:498)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1743)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1781)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBuilder.buildSessionFactory(LocalSessionFactoryBuilder.java:247)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.buildSessionFactory(LocalSessionFactoryBean.java:373)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.afterPropertiesSet(LocalSessionFactoryBean.java:358)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1547)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1485)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:524)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:323)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:107)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1393)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1134)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:522)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:626)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.preInstantiateSingletons(MonitoredListableBeanFactory.java:71)
+ at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:932)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.finishBeanFactoryInitialization(MonitoredGenericApplicationContext.java:74)
+ at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:479)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.refresh(MonitoredGenericApplicationContext.java:102)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.setNewDataSource(CdmApplicationController.java:264)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.<init>(CdmApplicationController.java:204)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.NewInstance(CdmApplicationController.java:148)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.getApplicationController(CdmStoreConnector.java:151)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.run(CdmStoreConnector.java:99)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Constraint "_UNIQUEKEY" already exists; SQL statement:
+alter table DeterminationEvent add constraint _UniqueKey unique (uuid) [90045-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.command.ddl.AlterTableAddConstraint.tryUpdate(AlterTableAddConstraint.java:89)
+ at org.h2.command.ddl.AlterTableAddConstraint.update(AlterTableAddConstraint.java:68)
+ at org.h2.command.CommandContainer.update(CommandContainer.java:75)
+ at org.h2.command.Command.executeUpdate(Command.java:230)
+ at org.h2.jdbc.JdbcStatement.executeUpdateInternal(JdbcStatement.java:125)
+ at org.h2.jdbc.JdbcStatement.executeUpdate(JdbcStatement.java:110)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.hibernate.tool.hbm2ddl.DatabaseExporter.export(DatabaseExporter.java:64)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.perform(SchemaExport.java:418)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.execute(SchemaExport.java:375)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:304)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:293)
+ at org.hibernate.internal.SessionFactoryImpl.<init>(SessionFactoryImpl.java:498)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1743)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1781)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBuilder.buildSessionFactory(LocalSessionFactoryBuilder.java:247)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.buildSessionFactory(LocalSessionFactoryBean.java:373)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.afterPropertiesSet(LocalSessionFactoryBean.java:358)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1547)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1485)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:524)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:323)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:107)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1393)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1134)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:522)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:626)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.preInstantiateSingletons(MonitoredListableBeanFactory.java:71)
+ at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:932)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.finishBeanFactoryInitialization(MonitoredGenericApplicationContext.java:74)
+ at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:479)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.refresh(MonitoredGenericApplicationContext.java:102)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.setNewDataSource(CdmApplicationController.java:264)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.<init>(CdmApplicationController.java:204)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.NewInstance(CdmApplicationController.java:148)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.getApplicationController(CdmStoreConnector.java:151)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.run(CdmStoreConnector.java:99)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Constraint "_UNIQUEKEY" already exists; SQL statement:
+alter table DnaQuality add constraint _UniqueKey unique (uuid) [90045-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.command.ddl.AlterTableAddConstraint.tryUpdate(AlterTableAddConstraint.java:89)
+ at org.h2.command.ddl.AlterTableAddConstraint.update(AlterTableAddConstraint.java:68)
+ at org.h2.command.CommandContainer.update(CommandContainer.java:75)
+ at org.h2.command.Command.executeUpdate(Command.java:230)
+ at org.h2.jdbc.JdbcStatement.executeUpdateInternal(JdbcStatement.java:125)
+ at org.h2.jdbc.JdbcStatement.executeUpdate(JdbcStatement.java:110)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.hibernate.tool.hbm2ddl.DatabaseExporter.export(DatabaseExporter.java:64)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.perform(SchemaExport.java:418)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.execute(SchemaExport.java:375)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:304)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:293)
+ at org.hibernate.internal.SessionFactoryImpl.<init>(SessionFactoryImpl.java:498)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1743)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1781)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBuilder.buildSessionFactory(LocalSessionFactoryBuilder.java:247)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.buildSessionFactory(LocalSessionFactoryBean.java:373)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.afterPropertiesSet(LocalSessionFactoryBean.java:358)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1547)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1485)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:524)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:323)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:107)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1393)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1134)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:522)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:626)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.preInstantiateSingletons(MonitoredListableBeanFactory.java:71)
+ at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:932)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.finishBeanFactoryInitialization(MonitoredGenericApplicationContext.java:74)
+ at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:479)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.refresh(MonitoredGenericApplicationContext.java:102)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.setNewDataSource(CdmApplicationController.java:264)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.<init>(CdmApplicationController.java:204)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.NewInstance(CdmApplicationController.java:148)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.getApplicationController(CdmStoreConnector.java:151)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.run(CdmStoreConnector.java:99)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Constraint "_UNIQUEKEY" already exists; SQL statement:
+alter table EntityConstraintViolation add constraint _UniqueKey unique (uuid) [90045-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.command.ddl.AlterTableAddConstraint.tryUpdate(AlterTableAddConstraint.java:89)
+ at org.h2.command.ddl.AlterTableAddConstraint.update(AlterTableAddConstraint.java:68)
+ at org.h2.command.CommandContainer.update(CommandContainer.java:75)
+ at org.h2.command.Command.executeUpdate(Command.java:230)
+ at org.h2.jdbc.JdbcStatement.executeUpdateInternal(JdbcStatement.java:125)
+ at org.h2.jdbc.JdbcStatement.executeUpdate(JdbcStatement.java:110)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.hibernate.tool.hbm2ddl.DatabaseExporter.export(DatabaseExporter.java:64)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.perform(SchemaExport.java:418)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.execute(SchemaExport.java:375)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:304)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:293)
+ at org.hibernate.internal.SessionFactoryImpl.<init>(SessionFactoryImpl.java:498)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1743)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1781)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBuilder.buildSessionFactory(LocalSessionFactoryBuilder.java:247)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.buildSessionFactory(LocalSessionFactoryBean.java:373)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.afterPropertiesSet(LocalSessionFactoryBean.java:358)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1547)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1485)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:524)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:323)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:107)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1393)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1134)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:522)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:626)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.preInstantiateSingletons(MonitoredListableBeanFactory.java:71)
+ at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:932)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.finishBeanFactoryInitialization(MonitoredGenericApplicationContext.java:74)
+ at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:479)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.refresh(MonitoredGenericApplicationContext.java:102)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.setNewDataSource(CdmApplicationController.java:264)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.<init>(CdmApplicationController.java:204)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.NewInstance(CdmApplicationController.java:148)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.getApplicationController(CdmStoreConnector.java:151)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.run(CdmStoreConnector.java:99)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Constraint "_UNIQUEKEY" already exists; SQL statement:
+alter table EntityValidation add constraint _UniqueKey unique (uuid) [90045-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.command.ddl.AlterTableAddConstraint.tryUpdate(AlterTableAddConstraint.java:89)
+ at org.h2.command.ddl.AlterTableAddConstraint.update(AlterTableAddConstraint.java:68)
+ at org.h2.command.CommandContainer.update(CommandContainer.java:75)
+ at org.h2.command.Command.executeUpdate(Command.java:230)
+ at org.h2.jdbc.JdbcStatement.executeUpdateInternal(JdbcStatement.java:125)
+ at org.h2.jdbc.JdbcStatement.executeUpdate(JdbcStatement.java:110)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.hibernate.tool.hbm2ddl.DatabaseExporter.export(DatabaseExporter.java:64)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.perform(SchemaExport.java:418)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.execute(SchemaExport.java:375)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:304)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:293)
+ at org.hibernate.internal.SessionFactoryImpl.<init>(SessionFactoryImpl.java:498)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1743)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1781)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBuilder.buildSessionFactory(LocalSessionFactoryBuilder.java:247)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.buildSessionFactory(LocalSessionFactoryBean.java:373)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.afterPropertiesSet(LocalSessionFactoryBean.java:358)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1547)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1485)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:524)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:323)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:107)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1393)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1134)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:522)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:626)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.preInstantiateSingletons(MonitoredListableBeanFactory.java:71)
+ at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:932)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.finishBeanFactoryInitialization(MonitoredGenericApplicationContext.java:74)
+ at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:479)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.refresh(MonitoredGenericApplicationContext.java:102)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.setNewDataSource(CdmApplicationController.java:264)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.<init>(CdmApplicationController.java:204)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.NewInstance(CdmApplicationController.java:148)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.getApplicationController(CdmStoreConnector.java:151)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.run(CdmStoreConnector.java:99)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Constraint "_UNIQUEKEY" already exists; SQL statement:
+alter table Extension add constraint _UniqueKey unique (uuid) [90045-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.command.ddl.AlterTableAddConstraint.tryUpdate(AlterTableAddConstraint.java:89)
+ at org.h2.command.ddl.AlterTableAddConstraint.update(AlterTableAddConstraint.java:68)
+ at org.h2.command.CommandContainer.update(CommandContainer.java:75)
+ at org.h2.command.Command.executeUpdate(Command.java:230)
+ at org.h2.jdbc.JdbcStatement.executeUpdateInternal(JdbcStatement.java:125)
+ at org.h2.jdbc.JdbcStatement.executeUpdate(JdbcStatement.java:110)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.hibernate.tool.hbm2ddl.DatabaseExporter.export(DatabaseExporter.java:64)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.perform(SchemaExport.java:418)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.execute(SchemaExport.java:375)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:304)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:293)
+ at org.hibernate.internal.SessionFactoryImpl.<init>(SessionFactoryImpl.java:498)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1743)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1781)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBuilder.buildSessionFactory(LocalSessionFactoryBuilder.java:247)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.buildSessionFactory(LocalSessionFactoryBean.java:373)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.afterPropertiesSet(LocalSessionFactoryBean.java:358)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1547)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1485)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:524)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:323)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:107)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1393)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1134)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:522)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:626)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.preInstantiateSingletons(MonitoredListableBeanFactory.java:71)
+ at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:932)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.finishBeanFactoryInitialization(MonitoredGenericApplicationContext.java:74)
+ at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:479)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.refresh(MonitoredGenericApplicationContext.java:102)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.setNewDataSource(CdmApplicationController.java:264)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.<init>(CdmApplicationController.java:204)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.NewInstance(CdmApplicationController.java:148)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.getApplicationController(CdmStoreConnector.java:151)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.run(CdmStoreConnector.java:99)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Constraint "_UNIQUEKEY" already exists; SQL statement:
+alter table FeatureNode add constraint _UniqueKey unique (uuid) [90045-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.command.ddl.AlterTableAddConstraint.tryUpdate(AlterTableAddConstraint.java:89)
+ at org.h2.command.ddl.AlterTableAddConstraint.update(AlterTableAddConstraint.java:68)
+ at org.h2.command.CommandContainer.update(CommandContainer.java:75)
+ at org.h2.command.Command.executeUpdate(Command.java:230)
+ at org.h2.jdbc.JdbcStatement.executeUpdateInternal(JdbcStatement.java:125)
+ at org.h2.jdbc.JdbcStatement.executeUpdate(JdbcStatement.java:110)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.hibernate.tool.hbm2ddl.DatabaseExporter.export(DatabaseExporter.java:64)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.perform(SchemaExport.java:418)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.execute(SchemaExport.java:375)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:304)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:293)
+ at org.hibernate.internal.SessionFactoryImpl.<init>(SessionFactoryImpl.java:498)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1743)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1781)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBuilder.buildSessionFactory(LocalSessionFactoryBuilder.java:247)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.buildSessionFactory(LocalSessionFactoryBean.java:373)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.afterPropertiesSet(LocalSessionFactoryBean.java:358)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1547)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1485)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:524)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:323)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:107)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1393)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1134)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:522)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:626)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.preInstantiateSingletons(MonitoredListableBeanFactory.java:71)
+ at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:932)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.finishBeanFactoryInitialization(MonitoredGenericApplicationContext.java:74)
+ at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:479)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.refresh(MonitoredGenericApplicationContext.java:102)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.setNewDataSource(CdmApplicationController.java:264)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.<init>(CdmApplicationController.java:204)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.NewInstance(CdmApplicationController.java:148)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.getApplicationController(CdmStoreConnector.java:151)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.run(CdmStoreConnector.java:99)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Constraint "_UNIQUEKEY" already exists; SQL statement:
+alter table FeatureTree add constraint _UniqueKey unique (uuid) [90045-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.command.ddl.AlterTableAddConstraint.tryUpdate(AlterTableAddConstraint.java:89)
+ at org.h2.command.ddl.AlterTableAddConstraint.update(AlterTableAddConstraint.java:68)
+ at org.h2.command.CommandContainer.update(CommandContainer.java:75)
+ at org.h2.command.Command.executeUpdate(Command.java:230)
+ at org.h2.jdbc.JdbcStatement.executeUpdateInternal(JdbcStatement.java:125)
+ at org.h2.jdbc.JdbcStatement.executeUpdate(JdbcStatement.java:110)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.hibernate.tool.hbm2ddl.DatabaseExporter.export(DatabaseExporter.java:64)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.perform(SchemaExport.java:418)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.execute(SchemaExport.java:375)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:304)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:293)
+ at org.hibernate.internal.SessionFactoryImpl.<init>(SessionFactoryImpl.java:498)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1743)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1781)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBuilder.buildSessionFactory(LocalSessionFactoryBuilder.java:247)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.buildSessionFactory(LocalSessionFactoryBean.java:373)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.afterPropertiesSet(LocalSessionFactoryBean.java:358)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1547)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1485)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:524)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:323)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:107)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1393)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1134)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:522)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:626)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.preInstantiateSingletons(MonitoredListableBeanFactory.java:71)
+ at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:932)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.finishBeanFactoryInitialization(MonitoredGenericApplicationContext.java:74)
+ at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:479)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.refresh(MonitoredGenericApplicationContext.java:102)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.setNewDataSource(CdmApplicationController.java:264)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.<init>(CdmApplicationController.java:204)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.NewInstance(CdmApplicationController.java:148)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.getApplicationController(CdmStoreConnector.java:151)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.run(CdmStoreConnector.java:99)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+06-15 17:38:37 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Constraint "_UNIQUEKEY" already exists; SQL statement:
+alter table GatheringEvent add constraint _UniqueKey unique (uuid) [90045-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.command.ddl.AlterTableAddConstraint.tryUpdate(AlterTableAddConstraint.java:89)
+ at org.h2.command.ddl.AlterTableAddConstraint.update(AlterTableAddConstraint.java:68)
+ at org.h2.command.CommandContainer.update(CommandContainer.java:75)
+ at org.h2.command.Command.executeUpdate(Command.java:230)
+ at org.h2.jdbc.JdbcStatement.executeUpdateInternal(JdbcStatement.java:125)
+ at org.h2.jdbc.JdbcStatement.executeUpdate(JdbcStatement.java:110)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.hibernate.tool.hbm2ddl.DatabaseExporter.export(DatabaseExporter.java:64)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.perform(SchemaExport.java:418)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.execute(SchemaExport.java:375)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:304)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:293)
+ at org.hibernate.internal.SessionFactoryImpl.<init>(SessionFactoryImpl.java:498)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1743)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1781)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBuilder.buildSessionFactory(LocalSessionFactoryBuilder.java:247)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.buildSessionFactory(LocalSessionFactoryBean.java:373)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.afterPropertiesSet(LocalSessionFactoryBean.java:358)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1547)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1485)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:524)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:323)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:107)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1393)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1134)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:522)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:626)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.preInstantiateSingletons(MonitoredListableBeanFactory.java:71)
+ at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:932)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.finishBeanFactoryInitialization(MonitoredGenericApplicationContext.java:74)
+ at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:479)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.refresh(MonitoredGenericApplicationContext.java:102)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.setNewDataSource(CdmApplicationController.java:264)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.<init>(CdmApplicationController.java:204)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.NewInstance(CdmApplicationController.java:148)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.getApplicationController(CdmStoreConnector.java:151)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.run(CdmStoreConnector.java:99)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+06-15 17:38:37 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Constraint "_UNIQUEKEY" already exists; SQL statement:
+alter table GrantedAuthorityImpl add constraint _UniqueKey unique (uuid) [90045-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.command.ddl.AlterTableAddConstraint.tryUpdate(AlterTableAddConstraint.java:89)
+ at org.h2.command.ddl.AlterTableAddConstraint.update(AlterTableAddConstraint.java:68)
+ at org.h2.command.CommandContainer.update(CommandContainer.java:75)
+ at org.h2.command.Command.executeUpdate(Command.java:230)
+ at org.h2.jdbc.JdbcStatement.executeUpdateInternal(JdbcStatement.java:125)
+ at org.h2.jdbc.JdbcStatement.executeUpdate(JdbcStatement.java:110)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.hibernate.tool.hbm2ddl.DatabaseExporter.export(DatabaseExporter.java:64)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.perform(SchemaExport.java:418)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.execute(SchemaExport.java:375)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:304)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:293)
+ at org.hibernate.internal.SessionFactoryImpl.<init>(SessionFactoryImpl.java:498)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1743)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1781)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBuilder.buildSessionFactory(LocalSessionFactoryBuilder.java:247)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.buildSessionFactory(LocalSessionFactoryBean.java:373)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.afterPropertiesSet(LocalSessionFactoryBean.java:358)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1547)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1485)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:524)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:323)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:107)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1393)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1134)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:522)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:626)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.preInstantiateSingletons(MonitoredListableBeanFactory.java:71)
+ at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:932)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.finishBeanFactoryInitialization(MonitoredGenericApplicationContext.java:74)
+ at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:479)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.refresh(MonitoredGenericApplicationContext.java:102)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.setNewDataSource(CdmApplicationController.java:264)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.<init>(CdmApplicationController.java:204)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.NewInstance(CdmApplicationController.java:148)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.getApplicationController(CdmStoreConnector.java:151)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.run(CdmStoreConnector.java:99)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+06-15 17:38:37 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Constraint "_UNIQUEKEY" already exists; SQL statement:
+alter table HomotypicalGroup add constraint _UniqueKey unique (uuid) [90045-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.command.ddl.AlterTableAddConstraint.tryUpdate(AlterTableAddConstraint.java:89)
+ at org.h2.command.ddl.AlterTableAddConstraint.update(AlterTableAddConstraint.java:68)
+ at org.h2.command.CommandContainer.update(CommandContainer.java:75)
+ at org.h2.command.Command.executeUpdate(Command.java:230)
+ at org.h2.jdbc.JdbcStatement.executeUpdateInternal(JdbcStatement.java:125)
+ at org.h2.jdbc.JdbcStatement.executeUpdate(JdbcStatement.java:110)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.hibernate.tool.hbm2ddl.DatabaseExporter.export(DatabaseExporter.java:64)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.perform(SchemaExport.java:418)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.execute(SchemaExport.java:375)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:304)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:293)
+ at org.hibernate.internal.SessionFactoryImpl.<init>(SessionFactoryImpl.java:498)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1743)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1781)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBuilder.buildSessionFactory(LocalSessionFactoryBuilder.java:247)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.buildSessionFactory(LocalSessionFactoryBean.java:373)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.afterPropertiesSet(LocalSessionFactoryBean.java:358)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1547)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1485)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:524)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:323)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:107)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1393)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1134)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:522)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:626)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.preInstantiateSingletons(MonitoredListableBeanFactory.java:71)
+ at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:932)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.finishBeanFactoryInitialization(MonitoredGenericApplicationContext.java:74)
+ at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:479)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.refresh(MonitoredGenericApplicationContext.java:102)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.setNewDataSource(CdmApplicationController.java:264)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.<init>(CdmApplicationController.java:204)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.NewInstance(CdmApplicationController.java:148)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.getApplicationController(CdmStoreConnector.java:151)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.run(CdmStoreConnector.java:99)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+06-15 17:38:37 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Constraint "_UNIQUEKEY" already exists; SQL statement:
+alter table HybridRelationship add constraint _UniqueKey unique (uuid) [90045-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.command.ddl.AlterTableAddConstraint.tryUpdate(AlterTableAddConstraint.java:89)
+ at org.h2.command.ddl.AlterTableAddConstraint.update(AlterTableAddConstraint.java:68)
+ at org.h2.command.CommandContainer.update(CommandContainer.java:75)
+ at org.h2.command.Command.executeUpdate(Command.java:230)
+ at org.h2.jdbc.JdbcStatement.executeUpdateInternal(JdbcStatement.java:125)
+ at org.h2.jdbc.JdbcStatement.executeUpdate(JdbcStatement.java:110)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.hibernate.tool.hbm2ddl.DatabaseExporter.export(DatabaseExporter.java:64)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.perform(SchemaExport.java:418)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.execute(SchemaExport.java:375)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:304)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:293)
+ at org.hibernate.internal.SessionFactoryImpl.<init>(SessionFactoryImpl.java:498)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1743)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1781)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBuilder.buildSessionFactory(LocalSessionFactoryBuilder.java:247)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.buildSessionFactory(LocalSessionFactoryBean.java:373)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.afterPropertiesSet(LocalSessionFactoryBean.java:358)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1547)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1485)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:524)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:323)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:107)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1393)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1134)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:522)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:626)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.preInstantiateSingletons(MonitoredListableBeanFactory.java:71)
+ at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:932)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.finishBeanFactoryInitialization(MonitoredGenericApplicationContext.java:74)
+ at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:479)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.refresh(MonitoredGenericApplicationContext.java:102)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.setNewDataSource(CdmApplicationController.java:264)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.<init>(CdmApplicationController.java:204)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.NewInstance(CdmApplicationController.java:148)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.getApplicationController(CdmStoreConnector.java:151)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.run(CdmStoreConnector.java:99)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+06-15 17:38:37 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Constraint "_UNIQUEKEY" already exists; SQL statement:
+alter table Identifier add constraint _UniqueKey unique (uuid) [90045-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.command.ddl.AlterTableAddConstraint.tryUpdate(AlterTableAddConstraint.java:89)
+ at org.h2.command.ddl.AlterTableAddConstraint.update(AlterTableAddConstraint.java:68)
+ at org.h2.command.CommandContainer.update(CommandContainer.java:75)
+ at org.h2.command.Command.executeUpdate(Command.java:230)
+ at org.h2.jdbc.JdbcStatement.executeUpdateInternal(JdbcStatement.java:125)
+ at org.h2.jdbc.JdbcStatement.executeUpdate(JdbcStatement.java:110)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.hibernate.tool.hbm2ddl.DatabaseExporter.export(DatabaseExporter.java:64)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.perform(SchemaExport.java:418)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.execute(SchemaExport.java:375)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:304)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:293)
+ at org.hibernate.internal.SessionFactoryImpl.<init>(SessionFactoryImpl.java:498)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1743)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1781)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBuilder.buildSessionFactory(LocalSessionFactoryBuilder.java:247)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.buildSessionFactory(LocalSessionFactoryBean.java:373)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.afterPropertiesSet(LocalSessionFactoryBean.java:358)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1547)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1485)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:524)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:323)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:107)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1393)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1134)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:522)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:626)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.preInstantiateSingletons(MonitoredListableBeanFactory.java:71)
+ at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:932)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.finishBeanFactoryInitialization(MonitoredGenericApplicationContext.java:74)
+ at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:479)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.refresh(MonitoredGenericApplicationContext.java:102)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.setNewDataSource(CdmApplicationController.java:264)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.<init>(CdmApplicationController.java:204)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.NewInstance(CdmApplicationController.java:148)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.getApplicationController(CdmStoreConnector.java:151)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.run(CdmStoreConnector.java:99)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+06-15 17:38:37 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Constraint "_UNIQUEKEY" already exists; SQL statement:
+alter table InstitutionalMembership add constraint _UniqueKey unique (uuid) [90045-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.command.ddl.AlterTableAddConstraint.tryUpdate(AlterTableAddConstraint.java:89)
+ at org.h2.command.ddl.AlterTableAddConstraint.update(AlterTableAddConstraint.java:68)
+ at org.h2.command.CommandContainer.update(CommandContainer.java:75)
+ at org.h2.command.Command.executeUpdate(Command.java:230)
+ at org.h2.jdbc.JdbcStatement.executeUpdateInternal(JdbcStatement.java:125)
+ at org.h2.jdbc.JdbcStatement.executeUpdate(JdbcStatement.java:110)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.hibernate.tool.hbm2ddl.DatabaseExporter.export(DatabaseExporter.java:64)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.perform(SchemaExport.java:418)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.execute(SchemaExport.java:375)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:304)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:293)
+ at org.hibernate.internal.SessionFactoryImpl.<init>(SessionFactoryImpl.java:498)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1743)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1781)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBuilder.buildSessionFactory(LocalSessionFactoryBuilder.java:247)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.buildSessionFactory(LocalSessionFactoryBean.java:373)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.afterPropertiesSet(LocalSessionFactoryBean.java:358)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1547)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1485)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:524)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:323)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:107)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1393)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1134)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:522)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:626)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.preInstantiateSingletons(MonitoredListableBeanFactory.java:71)
+ at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:932)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.finishBeanFactoryInitialization(MonitoredGenericApplicationContext.java:74)
+ at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:479)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.refresh(MonitoredGenericApplicationContext.java:102)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.setNewDataSource(CdmApplicationController.java:264)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.<init>(CdmApplicationController.java:204)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.NewInstance(CdmApplicationController.java:148)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.getApplicationController(CdmStoreConnector.java:151)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.run(CdmStoreConnector.java:99)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+06-15 17:38:37 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Constraint "_UNIQUEKEY" already exists; SQL statement:
+alter table IntextReference add constraint _UniqueKey unique (uuid) [90045-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.command.ddl.AlterTableAddConstraint.tryUpdate(AlterTableAddConstraint.java:89)
+ at org.h2.command.ddl.AlterTableAddConstraint.update(AlterTableAddConstraint.java:68)
+ at org.h2.command.CommandContainer.update(CommandContainer.java:75)
+ at org.h2.command.Command.executeUpdate(Command.java:230)
+ at org.h2.jdbc.JdbcStatement.executeUpdateInternal(JdbcStatement.java:125)
+ at org.h2.jdbc.JdbcStatement.executeUpdate(JdbcStatement.java:110)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.hibernate.tool.hbm2ddl.DatabaseExporter.export(DatabaseExporter.java:64)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.perform(SchemaExport.java:418)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.execute(SchemaExport.java:375)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:304)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:293)
+ at org.hibernate.internal.SessionFactoryImpl.<init>(SessionFactoryImpl.java:498)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1743)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1781)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBuilder.buildSessionFactory(LocalSessionFactoryBuilder.java:247)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.buildSessionFactory(LocalSessionFactoryBean.java:373)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.afterPropertiesSet(LocalSessionFactoryBean.java:358)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1547)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1485)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:524)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:323)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:107)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1393)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1134)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:522)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:626)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.preInstantiateSingletons(MonitoredListableBeanFactory.java:71)
+ at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:932)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.finishBeanFactoryInitialization(MonitoredGenericApplicationContext.java:74)
+ at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:479)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.refresh(MonitoredGenericApplicationContext.java:102)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.setNewDataSource(CdmApplicationController.java:264)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.<init>(CdmApplicationController.java:204)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.NewInstance(CdmApplicationController.java:148)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.getApplicationController(CdmStoreConnector.java:151)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.run(CdmStoreConnector.java:99)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+06-15 17:38:37 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Constraint "_UNIQUEKEY" already exists; SQL statement:
+alter table KeyStatement add constraint _UniqueKey unique (uuid) [90045-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.command.ddl.AlterTableAddConstraint.tryUpdate(AlterTableAddConstraint.java:89)
+ at org.h2.command.ddl.AlterTableAddConstraint.update(AlterTableAddConstraint.java:68)
+ at org.h2.command.CommandContainer.update(CommandContainer.java:75)
+ at org.h2.command.Command.executeUpdate(Command.java:230)
+ at org.h2.jdbc.JdbcStatement.executeUpdateInternal(JdbcStatement.java:125)
+ at org.h2.jdbc.JdbcStatement.executeUpdate(JdbcStatement.java:110)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.hibernate.tool.hbm2ddl.DatabaseExporter.export(DatabaseExporter.java:64)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.perform(SchemaExport.java:418)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.execute(SchemaExport.java:375)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:304)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:293)
+ at org.hibernate.internal.SessionFactoryImpl.<init>(SessionFactoryImpl.java:498)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1743)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1781)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBuilder.buildSessionFactory(LocalSessionFactoryBuilder.java:247)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.buildSessionFactory(LocalSessionFactoryBean.java:373)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.afterPropertiesSet(LocalSessionFactoryBean.java:358)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1547)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1485)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:524)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:323)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:107)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1393)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1134)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:522)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:626)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.preInstantiateSingletons(MonitoredListableBeanFactory.java:71)
+ at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:932)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.finishBeanFactoryInitialization(MonitoredGenericApplicationContext.java:74)
+ at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:479)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.refresh(MonitoredGenericApplicationContext.java:102)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.setNewDataSource(CdmApplicationController.java:264)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.<init>(CdmApplicationController.java:204)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.NewInstance(CdmApplicationController.java:148)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.getApplicationController(CdmStoreConnector.java:151)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.run(CdmStoreConnector.java:99)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+06-15 17:38:37 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Constraint "_UNIQUEKEY" already exists; SQL statement:
+alter table LSIDAuthority add constraint _UniqueKey unique (uuid, authority) [90045-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.command.ddl.AlterTableAddConstraint.tryUpdate(AlterTableAddConstraint.java:89)
+ at org.h2.command.ddl.AlterTableAddConstraint.update(AlterTableAddConstraint.java:68)
+ at org.h2.command.CommandContainer.update(CommandContainer.java:75)
+ at org.h2.command.Command.executeUpdate(Command.java:230)
+ at org.h2.jdbc.JdbcStatement.executeUpdateInternal(JdbcStatement.java:125)
+ at org.h2.jdbc.JdbcStatement.executeUpdate(JdbcStatement.java:110)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.hibernate.tool.hbm2ddl.DatabaseExporter.export(DatabaseExporter.java:64)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.perform(SchemaExport.java:418)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.execute(SchemaExport.java:375)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:304)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:293)
+ at org.hibernate.internal.SessionFactoryImpl.<init>(SessionFactoryImpl.java:498)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1743)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1781)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBuilder.buildSessionFactory(LocalSessionFactoryBuilder.java:247)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.buildSessionFactory(LocalSessionFactoryBean.java:373)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.afterPropertiesSet(LocalSessionFactoryBean.java:358)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1547)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1485)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:524)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:323)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:107)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1393)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1134)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:522)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:626)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.preInstantiateSingletons(MonitoredListableBeanFactory.java:71)
+ at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:932)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.finishBeanFactoryInitialization(MonitoredGenericApplicationContext.java:74)
+ at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:479)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.refresh(MonitoredGenericApplicationContext.java:102)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.setNewDataSource(CdmApplicationController.java:264)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.<init>(CdmApplicationController.java:204)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.NewInstance(CdmApplicationController.java:148)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.getApplicationController(CdmStoreConnector.java:151)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.run(CdmStoreConnector.java:99)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+06-15 17:38:37 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Constraint "_UNIQUEKEY" already exists; SQL statement:
+alter table LanguageString add constraint _UniqueKey unique (uuid) [90045-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.command.ddl.AlterTableAddConstraint.tryUpdate(AlterTableAddConstraint.java:89)
+ at org.h2.command.ddl.AlterTableAddConstraint.update(AlterTableAddConstraint.java:68)
+ at org.h2.command.CommandContainer.update(CommandContainer.java:75)
+ at org.h2.command.Command.executeUpdate(Command.java:230)
+ at org.h2.jdbc.JdbcStatement.executeUpdateInternal(JdbcStatement.java:125)
+ at org.h2.jdbc.JdbcStatement.executeUpdate(JdbcStatement.java:110)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.hibernate.tool.hbm2ddl.DatabaseExporter.export(DatabaseExporter.java:64)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.perform(SchemaExport.java:418)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.execute(SchemaExport.java:375)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:304)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:293)
+ at org.hibernate.internal.SessionFactoryImpl.<init>(SessionFactoryImpl.java:498)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1743)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1781)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBuilder.buildSessionFactory(LocalSessionFactoryBuilder.java:247)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.buildSessionFactory(LocalSessionFactoryBean.java:373)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.afterPropertiesSet(LocalSessionFactoryBean.java:358)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1547)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1485)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:524)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:323)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:107)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1393)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1134)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:522)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:626)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.preInstantiateSingletons(MonitoredListableBeanFactory.java:71)
+ at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:932)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.finishBeanFactoryInitialization(MonitoredGenericApplicationContext.java:74)
+ at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:479)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.refresh(MonitoredGenericApplicationContext.java:102)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.setNewDataSource(CdmApplicationController.java:264)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.<init>(CdmApplicationController.java:204)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.NewInstance(CdmApplicationController.java:148)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.getApplicationController(CdmStoreConnector.java:151)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.run(CdmStoreConnector.java:99)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+06-15 17:38:37 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Constraint "_UNIQUEKEY" already exists; SQL statement:
+alter table Marker add constraint _UniqueKey unique (uuid) [90045-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.command.ddl.AlterTableAddConstraint.tryUpdate(AlterTableAddConstraint.java:89)
+ at org.h2.command.ddl.AlterTableAddConstraint.update(AlterTableAddConstraint.java:68)
+ at org.h2.command.CommandContainer.update(CommandContainer.java:75)
+ at org.h2.command.Command.executeUpdate(Command.java:230)
+ at org.h2.jdbc.JdbcStatement.executeUpdateInternal(JdbcStatement.java:125)
+ at org.h2.jdbc.JdbcStatement.executeUpdate(JdbcStatement.java:110)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.hibernate.tool.hbm2ddl.DatabaseExporter.export(DatabaseExporter.java:64)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.perform(SchemaExport.java:418)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.execute(SchemaExport.java:375)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:304)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:293)
+ at org.hibernate.internal.SessionFactoryImpl.<init>(SessionFactoryImpl.java:498)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1743)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1781)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBuilder.buildSessionFactory(LocalSessionFactoryBuilder.java:247)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.buildSessionFactory(LocalSessionFactoryBean.java:373)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.afterPropertiesSet(LocalSessionFactoryBean.java:358)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1547)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1485)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:524)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:323)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:107)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1393)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1134)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:522)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:626)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.preInstantiateSingletons(MonitoredListableBeanFactory.java:71)
+ at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:932)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.finishBeanFactoryInitialization(MonitoredGenericApplicationContext.java:74)
+ at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:479)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.refresh(MonitoredGenericApplicationContext.java:102)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.setNewDataSource(CdmApplicationController.java:264)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.<init>(CdmApplicationController.java:204)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.NewInstance(CdmApplicationController.java:148)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.getApplicationController(CdmStoreConnector.java:151)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.run(CdmStoreConnector.java:99)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+06-15 17:38:37 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Constraint "_UNIQUEKEY" already exists; SQL statement:
+alter table MaterialOrMethodEvent add constraint _UniqueKey unique (uuid) [90045-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.command.ddl.AlterTableAddConstraint.tryUpdate(AlterTableAddConstraint.java:89)
+ at org.h2.command.ddl.AlterTableAddConstraint.update(AlterTableAddConstraint.java:68)
+ at org.h2.command.CommandContainer.update(CommandContainer.java:75)
+ at org.h2.command.Command.executeUpdate(Command.java:230)
+ at org.h2.jdbc.JdbcStatement.executeUpdateInternal(JdbcStatement.java:125)
+ at org.h2.jdbc.JdbcStatement.executeUpdate(JdbcStatement.java:110)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.hibernate.tool.hbm2ddl.DatabaseExporter.export(DatabaseExporter.java:64)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.perform(SchemaExport.java:418)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.execute(SchemaExport.java:375)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:304)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:293)
+ at org.hibernate.internal.SessionFactoryImpl.<init>(SessionFactoryImpl.java:498)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1743)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1781)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBuilder.buildSessionFactory(LocalSessionFactoryBuilder.java:247)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.buildSessionFactory(LocalSessionFactoryBean.java:373)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.afterPropertiesSet(LocalSessionFactoryBean.java:358)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1547)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1485)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:524)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:323)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:107)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1393)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1134)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:522)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:626)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.preInstantiateSingletons(MonitoredListableBeanFactory.java:71)
+ at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:932)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.finishBeanFactoryInitialization(MonitoredGenericApplicationContext.java:74)
+ at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:479)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.refresh(MonitoredGenericApplicationContext.java:102)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.setNewDataSource(CdmApplicationController.java:264)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.<init>(CdmApplicationController.java:204)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.NewInstance(CdmApplicationController.java:148)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.getApplicationController(CdmStoreConnector.java:151)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.run(CdmStoreConnector.java:99)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+06-15 17:38:37 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Constraint "_UNIQUEKEY" already exists; SQL statement:
+alter table Media add constraint _UniqueKey unique (uuid) [90045-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.command.ddl.AlterTableAddConstraint.tryUpdate(AlterTableAddConstraint.java:89)
+ at org.h2.command.ddl.AlterTableAddConstraint.update(AlterTableAddConstraint.java:68)
+ at org.h2.command.CommandContainer.update(CommandContainer.java:75)
+ at org.h2.command.Command.executeUpdate(Command.java:230)
+ at org.h2.jdbc.JdbcStatement.executeUpdateInternal(JdbcStatement.java:125)
+ at org.h2.jdbc.JdbcStatement.executeUpdate(JdbcStatement.java:110)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.hibernate.tool.hbm2ddl.DatabaseExporter.export(DatabaseExporter.java:64)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.perform(SchemaExport.java:418)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.execute(SchemaExport.java:375)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:304)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:293)
+ at org.hibernate.internal.SessionFactoryImpl.<init>(SessionFactoryImpl.java:498)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1743)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1781)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBuilder.buildSessionFactory(LocalSessionFactoryBuilder.java:247)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.buildSessionFactory(LocalSessionFactoryBean.java:373)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.afterPropertiesSet(LocalSessionFactoryBean.java:358)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1547)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1485)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:524)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:323)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:107)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1393)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1134)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:522)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:626)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.preInstantiateSingletons(MonitoredListableBeanFactory.java:71)
+ at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:932)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.finishBeanFactoryInitialization(MonitoredGenericApplicationContext.java:74)
+ at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:479)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.refresh(MonitoredGenericApplicationContext.java:102)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.setNewDataSource(CdmApplicationController.java:264)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.<init>(CdmApplicationController.java:204)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.NewInstance(CdmApplicationController.java:148)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.getApplicationController(CdmStoreConnector.java:151)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.run(CdmStoreConnector.java:99)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+06-15 17:38:37 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Constraint "_UNIQUEKEY" already exists; SQL statement:
+alter table MediaRepresentation add constraint _UniqueKey unique (uuid) [90045-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.command.ddl.AlterTableAddConstraint.tryUpdate(AlterTableAddConstraint.java:89)
+ at org.h2.command.ddl.AlterTableAddConstraint.update(AlterTableAddConstraint.java:68)
+ at org.h2.command.CommandContainer.update(CommandContainer.java:75)
+ at org.h2.command.Command.executeUpdate(Command.java:230)
+ at org.h2.jdbc.JdbcStatement.executeUpdateInternal(JdbcStatement.java:125)
+ at org.h2.jdbc.JdbcStatement.executeUpdate(JdbcStatement.java:110)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.hibernate.tool.hbm2ddl.DatabaseExporter.export(DatabaseExporter.java:64)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.perform(SchemaExport.java:418)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.execute(SchemaExport.java:375)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:304)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:293)
+ at org.hibernate.internal.SessionFactoryImpl.<init>(SessionFactoryImpl.java:498)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1743)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1781)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBuilder.buildSessionFactory(LocalSessionFactoryBuilder.java:247)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.buildSessionFactory(LocalSessionFactoryBean.java:373)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.afterPropertiesSet(LocalSessionFactoryBean.java:358)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1547)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1485)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:524)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:323)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:107)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1393)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1134)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:522)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:626)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.preInstantiateSingletons(MonitoredListableBeanFactory.java:71)
+ at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:932)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.finishBeanFactoryInitialization(MonitoredGenericApplicationContext.java:74)
+ at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:479)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.refresh(MonitoredGenericApplicationContext.java:102)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.setNewDataSource(CdmApplicationController.java:264)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.<init>(CdmApplicationController.java:204)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.NewInstance(CdmApplicationController.java:148)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.getApplicationController(CdmStoreConnector.java:151)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.run(CdmStoreConnector.java:99)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+06-15 17:38:37 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Constraint "_UNIQUEKEY" already exists; SQL statement:
+alter table MediaRepresentationPart add constraint _UniqueKey unique (uuid) [90045-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.command.ddl.AlterTableAddConstraint.tryUpdate(AlterTableAddConstraint.java:89)
+ at org.h2.command.ddl.AlterTableAddConstraint.update(AlterTableAddConstraint.java:68)
+ at org.h2.command.CommandContainer.update(CommandContainer.java:75)
+ at org.h2.command.Command.executeUpdate(Command.java:230)
+ at org.h2.jdbc.JdbcStatement.executeUpdateInternal(JdbcStatement.java:125)
+ at org.h2.jdbc.JdbcStatement.executeUpdate(JdbcStatement.java:110)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.hibernate.tool.hbm2ddl.DatabaseExporter.export(DatabaseExporter.java:64)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.perform(SchemaExport.java:418)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.execute(SchemaExport.java:375)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:304)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:293)
+ at org.hibernate.internal.SessionFactoryImpl.<init>(SessionFactoryImpl.java:498)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1743)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1781)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBuilder.buildSessionFactory(LocalSessionFactoryBuilder.java:247)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.buildSessionFactory(LocalSessionFactoryBean.java:373)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.afterPropertiesSet(LocalSessionFactoryBean.java:358)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1547)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1485)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:524)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:323)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:107)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1393)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1134)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:522)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:626)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.preInstantiateSingletons(MonitoredListableBeanFactory.java:71)
+ at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:932)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.finishBeanFactoryInitialization(MonitoredGenericApplicationContext.java:74)
+ at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:479)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.refresh(MonitoredGenericApplicationContext.java:102)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.setNewDataSource(CdmApplicationController.java:264)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.<init>(CdmApplicationController.java:204)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.NewInstance(CdmApplicationController.java:148)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.getApplicationController(CdmStoreConnector.java:151)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.run(CdmStoreConnector.java:99)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+06-15 17:38:37 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Constraint "_UNIQUEKEY" already exists; SQL statement:
+alter table NameRelationship add constraint _UniqueKey unique (uuid) [90045-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.command.ddl.AlterTableAddConstraint.tryUpdate(AlterTableAddConstraint.java:89)
+ at org.h2.command.ddl.AlterTableAddConstraint.update(AlterTableAddConstraint.java:68)
+ at org.h2.command.CommandContainer.update(CommandContainer.java:75)
+ at org.h2.command.Command.executeUpdate(Command.java:230)
+ at org.h2.jdbc.JdbcStatement.executeUpdateInternal(JdbcStatement.java:125)
+ at org.h2.jdbc.JdbcStatement.executeUpdate(JdbcStatement.java:110)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.hibernate.tool.hbm2ddl.DatabaseExporter.export(DatabaseExporter.java:64)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.perform(SchemaExport.java:418)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.execute(SchemaExport.java:375)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:304)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:293)
+ at org.hibernate.internal.SessionFactoryImpl.<init>(SessionFactoryImpl.java:498)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1743)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1781)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBuilder.buildSessionFactory(LocalSessionFactoryBuilder.java:247)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.buildSessionFactory(LocalSessionFactoryBean.java:373)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.afterPropertiesSet(LocalSessionFactoryBean.java:358)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1547)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1485)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:524)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:323)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:107)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1393)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1134)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:522)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:626)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.preInstantiateSingletons(MonitoredListableBeanFactory.java:71)
+ at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:932)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.finishBeanFactoryInitialization(MonitoredGenericApplicationContext.java:74)
+ at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:479)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.refresh(MonitoredGenericApplicationContext.java:102)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.setNewDataSource(CdmApplicationController.java:264)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.<init>(CdmApplicationController.java:204)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.NewInstance(CdmApplicationController.java:148)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.getApplicationController(CdmStoreConnector.java:151)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.run(CdmStoreConnector.java:99)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+06-15 17:38:37 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Constraint "_UNIQUEKEY" already exists; SQL statement:
+alter table NomenclaturalStatus add constraint _UniqueKey unique (uuid) [90045-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.command.ddl.AlterTableAddConstraint.tryUpdate(AlterTableAddConstraint.java:89)
+ at org.h2.command.ddl.AlterTableAddConstraint.update(AlterTableAddConstraint.java:68)
+ at org.h2.command.CommandContainer.update(CommandContainer.java:75)
+ at org.h2.command.Command.executeUpdate(Command.java:230)
+ at org.h2.jdbc.JdbcStatement.executeUpdateInternal(JdbcStatement.java:125)
+ at org.h2.jdbc.JdbcStatement.executeUpdate(JdbcStatement.java:110)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.hibernate.tool.hbm2ddl.DatabaseExporter.export(DatabaseExporter.java:64)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.perform(SchemaExport.java:418)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.execute(SchemaExport.java:375)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:304)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:293)
+ at org.hibernate.internal.SessionFactoryImpl.<init>(SessionFactoryImpl.java:498)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1743)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1781)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBuilder.buildSessionFactory(LocalSessionFactoryBuilder.java:247)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.buildSessionFactory(LocalSessionFactoryBean.java:373)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.afterPropertiesSet(LocalSessionFactoryBean.java:358)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1547)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1485)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:524)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:323)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:107)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1393)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1134)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:522)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:626)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.preInstantiateSingletons(MonitoredListableBeanFactory.java:71)
+ at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:932)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.finishBeanFactoryInitialization(MonitoredGenericApplicationContext.java:74)
+ at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:479)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.refresh(MonitoredGenericApplicationContext.java:102)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.setNewDataSource(CdmApplicationController.java:264)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.<init>(CdmApplicationController.java:204)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.NewInstance(CdmApplicationController.java:148)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.getApplicationController(CdmStoreConnector.java:151)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.run(CdmStoreConnector.java:99)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+06-15 17:38:37 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Constraint "_UNIQUEKEY" already exists; SQL statement:
+alter table OriginalSourceBase add constraint _UniqueKey unique (uuid) [90045-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.command.ddl.AlterTableAddConstraint.tryUpdate(AlterTableAddConstraint.java:89)
+ at org.h2.command.ddl.AlterTableAddConstraint.update(AlterTableAddConstraint.java:68)
+ at org.h2.command.CommandContainer.update(CommandContainer.java:75)
+ at org.h2.command.Command.executeUpdate(Command.java:230)
+ at org.h2.jdbc.JdbcStatement.executeUpdateInternal(JdbcStatement.java:125)
+ at org.h2.jdbc.JdbcStatement.executeUpdate(JdbcStatement.java:110)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.hibernate.tool.hbm2ddl.DatabaseExporter.export(DatabaseExporter.java:64)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.perform(SchemaExport.java:418)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.execute(SchemaExport.java:375)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:304)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:293)
+ at org.hibernate.internal.SessionFactoryImpl.<init>(SessionFactoryImpl.java:498)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1743)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1781)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBuilder.buildSessionFactory(LocalSessionFactoryBuilder.java:247)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.buildSessionFactory(LocalSessionFactoryBean.java:373)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.afterPropertiesSet(LocalSessionFactoryBean.java:358)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1547)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1485)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:524)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:323)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:107)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1393)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1134)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:522)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:626)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.preInstantiateSingletons(MonitoredListableBeanFactory.java:71)
+ at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:932)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.finishBeanFactoryInitialization(MonitoredGenericApplicationContext.java:74)
+ at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:479)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.refresh(MonitoredGenericApplicationContext.java:102)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.setNewDataSource(CdmApplicationController.java:264)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.<init>(CdmApplicationController.java:204)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.NewInstance(CdmApplicationController.java:148)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.getApplicationController(CdmStoreConnector.java:151)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.run(CdmStoreConnector.java:99)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+06-15 17:38:37 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Constraint "_UNIQUEKEY" already exists; SQL statement:
+alter table PermissionGroup add constraint _UniqueKey unique (uuid) [90045-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.command.ddl.AlterTableAddConstraint.tryUpdate(AlterTableAddConstraint.java:89)
+ at org.h2.command.ddl.AlterTableAddConstraint.update(AlterTableAddConstraint.java:68)
+ at org.h2.command.CommandContainer.update(CommandContainer.java:75)
+ at org.h2.command.Command.executeUpdate(Command.java:230)
+ at org.h2.jdbc.JdbcStatement.executeUpdateInternal(JdbcStatement.java:125)
+ at org.h2.jdbc.JdbcStatement.executeUpdate(JdbcStatement.java:110)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.hibernate.tool.hbm2ddl.DatabaseExporter.export(DatabaseExporter.java:64)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.perform(SchemaExport.java:418)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.execute(SchemaExport.java:375)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:304)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:293)
+ at org.hibernate.internal.SessionFactoryImpl.<init>(SessionFactoryImpl.java:498)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1743)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1781)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBuilder.buildSessionFactory(LocalSessionFactoryBuilder.java:247)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.buildSessionFactory(LocalSessionFactoryBean.java:373)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.afterPropertiesSet(LocalSessionFactoryBean.java:358)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1547)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1485)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:524)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:323)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:107)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1393)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1134)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:522)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:626)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.preInstantiateSingletons(MonitoredListableBeanFactory.java:71)
+ at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:932)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.finishBeanFactoryInitialization(MonitoredGenericApplicationContext.java:74)
+ at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:479)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.refresh(MonitoredGenericApplicationContext.java:102)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.setNewDataSource(CdmApplicationController.java:264)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.<init>(CdmApplicationController.java:204)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.NewInstance(CdmApplicationController.java:148)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.getApplicationController(CdmStoreConnector.java:151)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.run(CdmStoreConnector.java:99)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+06-15 17:38:37 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Constraint "_UNIQUEKEY" already exists; SQL statement:
+alter table PolytomousKey add constraint _UniqueKey unique (uuid) [90045-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.command.ddl.AlterTableAddConstraint.tryUpdate(AlterTableAddConstraint.java:89)
+ at org.h2.command.ddl.AlterTableAddConstraint.update(AlterTableAddConstraint.java:68)
+ at org.h2.command.CommandContainer.update(CommandContainer.java:75)
+ at org.h2.command.Command.executeUpdate(Command.java:230)
+ at org.h2.jdbc.JdbcStatement.executeUpdateInternal(JdbcStatement.java:125)
+ at org.h2.jdbc.JdbcStatement.executeUpdate(JdbcStatement.java:110)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.hibernate.tool.hbm2ddl.DatabaseExporter.export(DatabaseExporter.java:64)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.perform(SchemaExport.java:418)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.execute(SchemaExport.java:375)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:304)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:293)
+ at org.hibernate.internal.SessionFactoryImpl.<init>(SessionFactoryImpl.java:498)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1743)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1781)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBuilder.buildSessionFactory(LocalSessionFactoryBuilder.java:247)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.buildSessionFactory(LocalSessionFactoryBean.java:373)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.afterPropertiesSet(LocalSessionFactoryBean.java:358)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1547)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1485)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:524)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:323)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:107)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1393)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1134)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:522)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:626)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.preInstantiateSingletons(MonitoredListableBeanFactory.java:71)
+ at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:932)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.finishBeanFactoryInitialization(MonitoredGenericApplicationContext.java:74)
+ at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:479)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.refresh(MonitoredGenericApplicationContext.java:102)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.setNewDataSource(CdmApplicationController.java:264)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.<init>(CdmApplicationController.java:204)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.NewInstance(CdmApplicationController.java:148)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.getApplicationController(CdmStoreConnector.java:151)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.run(CdmStoreConnector.java:99)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+06-15 17:38:37 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Constraint "_UNIQUEKEY" already exists; SQL statement:
+alter table PolytomousKeyNode add constraint _UniqueKey unique (uuid) [90045-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.command.ddl.AlterTableAddConstraint.tryUpdate(AlterTableAddConstraint.java:89)
+ at org.h2.command.ddl.AlterTableAddConstraint.update(AlterTableAddConstraint.java:68)
+ at org.h2.command.CommandContainer.update(CommandContainer.java:75)
+ at org.h2.command.Command.executeUpdate(Command.java:230)
+ at org.h2.jdbc.JdbcStatement.executeUpdateInternal(JdbcStatement.java:125)
+ at org.h2.jdbc.JdbcStatement.executeUpdate(JdbcStatement.java:110)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.hibernate.tool.hbm2ddl.DatabaseExporter.export(DatabaseExporter.java:64)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.perform(SchemaExport.java:418)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.execute(SchemaExport.java:375)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:304)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:293)
+ at org.hibernate.internal.SessionFactoryImpl.<init>(SessionFactoryImpl.java:498)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1743)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1781)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBuilder.buildSessionFactory(LocalSessionFactoryBuilder.java:247)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.buildSessionFactory(LocalSessionFactoryBean.java:373)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.afterPropertiesSet(LocalSessionFactoryBean.java:358)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1547)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1485)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:524)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:323)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:107)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1393)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1134)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:522)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:626)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.preInstantiateSingletons(MonitoredListableBeanFactory.java:71)
+ at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:932)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.finishBeanFactoryInitialization(MonitoredGenericApplicationContext.java:74)
+ at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:479)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.refresh(MonitoredGenericApplicationContext.java:102)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.setNewDataSource(CdmApplicationController.java:264)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.<init>(CdmApplicationController.java:204)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.NewInstance(CdmApplicationController.java:148)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.getApplicationController(CdmStoreConnector.java:151)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.run(CdmStoreConnector.java:99)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+06-15 17:38:37 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Constraint "_UNIQUEKEY" already exists; SQL statement:
+alter table Primer add constraint _UniqueKey unique (uuid) [90045-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.command.ddl.AlterTableAddConstraint.tryUpdate(AlterTableAddConstraint.java:89)
+ at org.h2.command.ddl.AlterTableAddConstraint.update(AlterTableAddConstraint.java:68)
+ at org.h2.command.CommandContainer.update(CommandContainer.java:75)
+ at org.h2.command.Command.executeUpdate(Command.java:230)
+ at org.h2.jdbc.JdbcStatement.executeUpdateInternal(JdbcStatement.java:125)
+ at org.h2.jdbc.JdbcStatement.executeUpdate(JdbcStatement.java:110)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.hibernate.tool.hbm2ddl.DatabaseExporter.export(DatabaseExporter.java:64)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.perform(SchemaExport.java:418)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.execute(SchemaExport.java:375)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:304)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:293)
+ at org.hibernate.internal.SessionFactoryImpl.<init>(SessionFactoryImpl.java:498)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1743)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1781)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBuilder.buildSessionFactory(LocalSessionFactoryBuilder.java:247)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.buildSessionFactory(LocalSessionFactoryBean.java:373)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.afterPropertiesSet(LocalSessionFactoryBean.java:358)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1547)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1485)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:524)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:323)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:107)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1393)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1134)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:522)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:626)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.preInstantiateSingletons(MonitoredListableBeanFactory.java:71)
+ at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:932)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.finishBeanFactoryInitialization(MonitoredGenericApplicationContext.java:74)
+ at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:479)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.refresh(MonitoredGenericApplicationContext.java:102)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.setNewDataSource(CdmApplicationController.java:264)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.<init>(CdmApplicationController.java:204)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.NewInstance(CdmApplicationController.java:148)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.getApplicationController(CdmStoreConnector.java:151)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.run(CdmStoreConnector.java:99)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+06-15 17:38:37 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Constraint "_UNIQUEKEY" already exists; SQL statement:
+alter table Reference add constraint _UniqueKey unique (uuid) [90045-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.command.ddl.AlterTableAddConstraint.tryUpdate(AlterTableAddConstraint.java:89)
+ at org.h2.command.ddl.AlterTableAddConstraint.update(AlterTableAddConstraint.java:68)
+ at org.h2.command.CommandContainer.update(CommandContainer.java:75)
+ at org.h2.command.Command.executeUpdate(Command.java:230)
+ at org.h2.jdbc.JdbcStatement.executeUpdateInternal(JdbcStatement.java:125)
+ at org.h2.jdbc.JdbcStatement.executeUpdate(JdbcStatement.java:110)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.hibernate.tool.hbm2ddl.DatabaseExporter.export(DatabaseExporter.java:64)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.perform(SchemaExport.java:418)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.execute(SchemaExport.java:375)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:304)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:293)
+ at org.hibernate.internal.SessionFactoryImpl.<init>(SessionFactoryImpl.java:498)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1743)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1781)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBuilder.buildSessionFactory(LocalSessionFactoryBuilder.java:247)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.buildSessionFactory(LocalSessionFactoryBean.java:373)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.afterPropertiesSet(LocalSessionFactoryBean.java:358)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1547)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1485)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:524)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:323)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:107)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1393)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1134)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:522)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:626)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.preInstantiateSingletons(MonitoredListableBeanFactory.java:71)
+ at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:932)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.finishBeanFactoryInitialization(MonitoredGenericApplicationContext.java:74)
+ at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:479)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.refresh(MonitoredGenericApplicationContext.java:102)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.setNewDataSource(CdmApplicationController.java:264)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.<init>(CdmApplicationController.java:204)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.NewInstance(CdmApplicationController.java:148)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.getApplicationController(CdmStoreConnector.java:151)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.run(CdmStoreConnector.java:99)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+06-15 17:38:37 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Constraint "_UNIQUEKEY" already exists; SQL statement:
+alter table Representation add constraint _UniqueKey unique (uuid) [90045-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.command.ddl.AlterTableAddConstraint.tryUpdate(AlterTableAddConstraint.java:89)
+ at org.h2.command.ddl.AlterTableAddConstraint.update(AlterTableAddConstraint.java:68)
+ at org.h2.command.CommandContainer.update(CommandContainer.java:75)
+ at org.h2.command.Command.executeUpdate(Command.java:230)
+ at org.h2.jdbc.JdbcStatement.executeUpdateInternal(JdbcStatement.java:125)
+ at org.h2.jdbc.JdbcStatement.executeUpdate(JdbcStatement.java:110)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.hibernate.tool.hbm2ddl.DatabaseExporter.export(DatabaseExporter.java:64)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.perform(SchemaExport.java:418)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.execute(SchemaExport.java:375)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:304)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:293)
+ at org.hibernate.internal.SessionFactoryImpl.<init>(SessionFactoryImpl.java:498)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1743)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1781)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBuilder.buildSessionFactory(LocalSessionFactoryBuilder.java:247)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.buildSessionFactory(LocalSessionFactoryBean.java:373)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.afterPropertiesSet(LocalSessionFactoryBean.java:358)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1547)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1485)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:524)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:323)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:107)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1393)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1134)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:522)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:626)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.preInstantiateSingletons(MonitoredListableBeanFactory.java:71)
+ at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:932)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.finishBeanFactoryInitialization(MonitoredGenericApplicationContext.java:74)
+ at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:479)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.refresh(MonitoredGenericApplicationContext.java:102)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.setNewDataSource(CdmApplicationController.java:264)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.<init>(CdmApplicationController.java:204)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.NewInstance(CdmApplicationController.java:148)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.getApplicationController(CdmStoreConnector.java:151)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.run(CdmStoreConnector.java:99)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+06-15 17:38:37 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Constraint "_UNIQUEKEY" already exists; SQL statement:
+alter table RightsInfo add constraint _UniqueKey unique (uuid) [90045-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.command.ddl.AlterTableAddConstraint.tryUpdate(AlterTableAddConstraint.java:89)
+ at org.h2.command.ddl.AlterTableAddConstraint.update(AlterTableAddConstraint.java:68)
+ at org.h2.command.CommandContainer.update(CommandContainer.java:75)
+ at org.h2.command.Command.executeUpdate(Command.java:230)
+ at org.h2.jdbc.JdbcStatement.executeUpdateInternal(JdbcStatement.java:125)
+ at org.h2.jdbc.JdbcStatement.executeUpdate(JdbcStatement.java:110)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.hibernate.tool.hbm2ddl.DatabaseExporter.export(DatabaseExporter.java:64)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.perform(SchemaExport.java:418)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.execute(SchemaExport.java:375)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:304)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:293)
+ at org.hibernate.internal.SessionFactoryImpl.<init>(SessionFactoryImpl.java:498)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1743)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1781)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBuilder.buildSessionFactory(LocalSessionFactoryBuilder.java:247)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.buildSessionFactory(LocalSessionFactoryBean.java:373)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.afterPropertiesSet(LocalSessionFactoryBean.java:358)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1547)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1485)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:524)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:323)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:107)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1393)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1134)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:522)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:626)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.preInstantiateSingletons(MonitoredListableBeanFactory.java:71)
+ at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:932)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.finishBeanFactoryInitialization(MonitoredGenericApplicationContext.java:74)
+ at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:479)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.refresh(MonitoredGenericApplicationContext.java:102)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.setNewDataSource(CdmApplicationController.java:264)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.<init>(CdmApplicationController.java:204)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.NewInstance(CdmApplicationController.java:148)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.getApplicationController(CdmStoreConnector.java:151)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.run(CdmStoreConnector.java:99)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+06-15 17:38:37 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Constraint "_UNIQUEKEY" already exists; SQL statement:
+alter table Sequence add constraint _UniqueKey unique (uuid) [90045-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.command.ddl.AlterTableAddConstraint.tryUpdate(AlterTableAddConstraint.java:89)
+ at org.h2.command.ddl.AlterTableAddConstraint.update(AlterTableAddConstraint.java:68)
+ at org.h2.command.CommandContainer.update(CommandContainer.java:75)
+ at org.h2.command.Command.executeUpdate(Command.java:230)
+ at org.h2.jdbc.JdbcStatement.executeUpdateInternal(JdbcStatement.java:125)
+ at org.h2.jdbc.JdbcStatement.executeUpdate(JdbcStatement.java:110)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.hibernate.tool.hbm2ddl.DatabaseExporter.export(DatabaseExporter.java:64)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.perform(SchemaExport.java:418)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.execute(SchemaExport.java:375)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:304)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:293)
+ at org.hibernate.internal.SessionFactoryImpl.<init>(SessionFactoryImpl.java:498)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1743)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1781)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBuilder.buildSessionFactory(LocalSessionFactoryBuilder.java:247)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.buildSessionFactory(LocalSessionFactoryBean.java:373)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.afterPropertiesSet(LocalSessionFactoryBean.java:358)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1547)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1485)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:524)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:323)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:107)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1393)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1134)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:522)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:626)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.preInstantiateSingletons(MonitoredListableBeanFactory.java:71)
+ at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:932)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.finishBeanFactoryInitialization(MonitoredGenericApplicationContext.java:74)
+ at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:479)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.refresh(MonitoredGenericApplicationContext.java:102)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.setNewDataSource(CdmApplicationController.java:264)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.<init>(CdmApplicationController.java:204)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.NewInstance(CdmApplicationController.java:148)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.getApplicationController(CdmStoreConnector.java:151)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.run(CdmStoreConnector.java:99)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+06-15 17:38:37 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Constraint "_UNIQUEKEY" already exists; SQL statement:
+alter table SingleRead add constraint _UniqueKey unique (uuid) [90045-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.command.ddl.AlterTableAddConstraint.tryUpdate(AlterTableAddConstraint.java:89)
+ at org.h2.command.ddl.AlterTableAddConstraint.update(AlterTableAddConstraint.java:68)
+ at org.h2.command.CommandContainer.update(CommandContainer.java:75)
+ at org.h2.command.Command.executeUpdate(Command.java:230)
+ at org.h2.jdbc.JdbcStatement.executeUpdateInternal(JdbcStatement.java:125)
+ at org.h2.jdbc.JdbcStatement.executeUpdate(JdbcStatement.java:110)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.hibernate.tool.hbm2ddl.DatabaseExporter.export(DatabaseExporter.java:64)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.perform(SchemaExport.java:418)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.execute(SchemaExport.java:375)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:304)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:293)
+ at org.hibernate.internal.SessionFactoryImpl.<init>(SessionFactoryImpl.java:498)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1743)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1781)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBuilder.buildSessionFactory(LocalSessionFactoryBuilder.java:247)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.buildSessionFactory(LocalSessionFactoryBean.java:373)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.afterPropertiesSet(LocalSessionFactoryBean.java:358)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1547)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1485)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:524)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:323)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:107)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1393)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1134)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:522)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:626)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.preInstantiateSingletons(MonitoredListableBeanFactory.java:71)
+ at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:932)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.finishBeanFactoryInitialization(MonitoredGenericApplicationContext.java:74)
+ at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:479)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.refresh(MonitoredGenericApplicationContext.java:102)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.setNewDataSource(CdmApplicationController.java:264)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.<init>(CdmApplicationController.java:204)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.NewInstance(CdmApplicationController.java:148)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.getApplicationController(CdmStoreConnector.java:151)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.run(CdmStoreConnector.java:99)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+06-15 17:38:37 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Constraint "_UNIQUEKEY" already exists; SQL statement:
+alter table SingleReadAlignment add constraint _UniqueKey unique (uuid) [90045-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.command.ddl.AlterTableAddConstraint.tryUpdate(AlterTableAddConstraint.java:89)
+ at org.h2.command.ddl.AlterTableAddConstraint.update(AlterTableAddConstraint.java:68)
+ at org.h2.command.CommandContainer.update(CommandContainer.java:75)
+ at org.h2.command.Command.executeUpdate(Command.java:230)
+ at org.h2.jdbc.JdbcStatement.executeUpdateInternal(JdbcStatement.java:125)
+ at org.h2.jdbc.JdbcStatement.executeUpdate(JdbcStatement.java:110)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.hibernate.tool.hbm2ddl.DatabaseExporter.export(DatabaseExporter.java:64)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.perform(SchemaExport.java:418)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.execute(SchemaExport.java:375)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:304)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:293)
+ at org.hibernate.internal.SessionFactoryImpl.<init>(SessionFactoryImpl.java:498)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1743)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1781)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBuilder.buildSessionFactory(LocalSessionFactoryBuilder.java:247)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.buildSessionFactory(LocalSessionFactoryBean.java:373)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.afterPropertiesSet(LocalSessionFactoryBean.java:358)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1547)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1485)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:524)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:323)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:107)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1393)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1134)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:522)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:626)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.preInstantiateSingletons(MonitoredListableBeanFactory.java:71)
+ at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:932)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.finishBeanFactoryInitialization(MonitoredGenericApplicationContext.java:74)
+ at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:479)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.refresh(MonitoredGenericApplicationContext.java:102)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.setNewDataSource(CdmApplicationController.java:264)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.<init>(CdmApplicationController.java:204)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.NewInstance(CdmApplicationController.java:148)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.getApplicationController(CdmStoreConnector.java:151)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.run(CdmStoreConnector.java:99)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+06-15 17:38:37 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Constraint "_UNIQUEKEY" already exists; SQL statement:
+alter table SpecimenOrObservationBase add constraint _UniqueKey unique (uuid) [90045-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.command.ddl.AlterTableAddConstraint.tryUpdate(AlterTableAddConstraint.java:89)
+ at org.h2.command.ddl.AlterTableAddConstraint.update(AlterTableAddConstraint.java:68)
+ at org.h2.command.CommandContainer.update(CommandContainer.java:75)
+ at org.h2.command.Command.executeUpdate(Command.java:230)
+ at org.h2.jdbc.JdbcStatement.executeUpdateInternal(JdbcStatement.java:125)
+ at org.h2.jdbc.JdbcStatement.executeUpdate(JdbcStatement.java:110)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.hibernate.tool.hbm2ddl.DatabaseExporter.export(DatabaseExporter.java:64)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.perform(SchemaExport.java:418)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.execute(SchemaExport.java:375)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:304)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:293)
+ at org.hibernate.internal.SessionFactoryImpl.<init>(SessionFactoryImpl.java:498)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1743)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1781)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBuilder.buildSessionFactory(LocalSessionFactoryBuilder.java:247)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.buildSessionFactory(LocalSessionFactoryBean.java:373)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.afterPropertiesSet(LocalSessionFactoryBean.java:358)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1547)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1485)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:524)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:323)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:107)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1393)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1134)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:522)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:626)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.preInstantiateSingletons(MonitoredListableBeanFactory.java:71)
+ at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:932)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.finishBeanFactoryInitialization(MonitoredGenericApplicationContext.java:74)
+ at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:479)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.refresh(MonitoredGenericApplicationContext.java:102)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.setNewDataSource(CdmApplicationController.java:264)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.<init>(CdmApplicationController.java:204)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.NewInstance(CdmApplicationController.java:148)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.getApplicationController(CdmStoreConnector.java:151)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.run(CdmStoreConnector.java:99)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+06-15 17:38:37 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Constraint "_UNIQUEKEY" already exists; SQL statement:
+alter table StateData add constraint _UniqueKey unique (uuid) [90045-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.command.ddl.AlterTableAddConstraint.tryUpdate(AlterTableAddConstraint.java:89)
+ at org.h2.command.ddl.AlterTableAddConstraint.update(AlterTableAddConstraint.java:68)
+ at org.h2.command.CommandContainer.update(CommandContainer.java:75)
+ at org.h2.command.Command.executeUpdate(Command.java:230)
+ at org.h2.jdbc.JdbcStatement.executeUpdateInternal(JdbcStatement.java:125)
+ at org.h2.jdbc.JdbcStatement.executeUpdate(JdbcStatement.java:110)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.hibernate.tool.hbm2ddl.DatabaseExporter.export(DatabaseExporter.java:64)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.perform(SchemaExport.java:418)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.execute(SchemaExport.java:375)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:304)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:293)
+ at org.hibernate.internal.SessionFactoryImpl.<init>(SessionFactoryImpl.java:498)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1743)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1781)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBuilder.buildSessionFactory(LocalSessionFactoryBuilder.java:247)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.buildSessionFactory(LocalSessionFactoryBean.java:373)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.afterPropertiesSet(LocalSessionFactoryBean.java:358)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1547)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1485)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:524)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:323)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:107)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1393)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1134)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:522)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:626)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.preInstantiateSingletons(MonitoredListableBeanFactory.java:71)
+ at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:932)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.finishBeanFactoryInitialization(MonitoredGenericApplicationContext.java:74)
+ at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:479)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.refresh(MonitoredGenericApplicationContext.java:102)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.setNewDataSource(CdmApplicationController.java:264)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.<init>(CdmApplicationController.java:204)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.NewInstance(CdmApplicationController.java:148)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.getApplicationController(CdmStoreConnector.java:151)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.run(CdmStoreConnector.java:99)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+06-15 17:38:37 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Constraint "_UNIQUEKEY" already exists; SQL statement:
+alter table StatisticalMeasurementValue add constraint _UniqueKey unique (uuid) [90045-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.command.ddl.AlterTableAddConstraint.tryUpdate(AlterTableAddConstraint.java:89)
+ at org.h2.command.ddl.AlterTableAddConstraint.update(AlterTableAddConstraint.java:68)
+ at org.h2.command.CommandContainer.update(CommandContainer.java:75)
+ at org.h2.command.Command.executeUpdate(Command.java:230)
+ at org.h2.jdbc.JdbcStatement.executeUpdateInternal(JdbcStatement.java:125)
+ at org.h2.jdbc.JdbcStatement.executeUpdate(JdbcStatement.java:110)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.hibernate.tool.hbm2ddl.DatabaseExporter.export(DatabaseExporter.java:64)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.perform(SchemaExport.java:418)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.execute(SchemaExport.java:375)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:304)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:293)
+ at org.hibernate.internal.SessionFactoryImpl.<init>(SessionFactoryImpl.java:498)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1743)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1781)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBuilder.buildSessionFactory(LocalSessionFactoryBuilder.java:247)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.buildSessionFactory(LocalSessionFactoryBean.java:373)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.afterPropertiesSet(LocalSessionFactoryBean.java:358)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1547)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1485)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:524)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:323)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:107)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1393)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1134)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:522)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:626)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.preInstantiateSingletons(MonitoredListableBeanFactory.java:71)
+ at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:932)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.finishBeanFactoryInitialization(MonitoredGenericApplicationContext.java:74)
+ at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:479)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.refresh(MonitoredGenericApplicationContext.java:102)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.setNewDataSource(CdmApplicationController.java:264)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.<init>(CdmApplicationController.java:204)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.NewInstance(CdmApplicationController.java:148)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.getApplicationController(CdmStoreConnector.java:151)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.run(CdmStoreConnector.java:99)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+06-15 17:38:37 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Constraint "_UNIQUEKEY" already exists; SQL statement:
+alter table SynonymRelationship add constraint _UniqueKey unique (uuid) [90045-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.command.ddl.AlterTableAddConstraint.tryUpdate(AlterTableAddConstraint.java:89)
+ at org.h2.command.ddl.AlterTableAddConstraint.update(AlterTableAddConstraint.java:68)
+ at org.h2.command.CommandContainer.update(CommandContainer.java:75)
+ at org.h2.command.Command.executeUpdate(Command.java:230)
+ at org.h2.jdbc.JdbcStatement.executeUpdateInternal(JdbcStatement.java:125)
+ at org.h2.jdbc.JdbcStatement.executeUpdate(JdbcStatement.java:110)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.hibernate.tool.hbm2ddl.DatabaseExporter.export(DatabaseExporter.java:64)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.perform(SchemaExport.java:418)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.execute(SchemaExport.java:375)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:304)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:293)
+ at org.hibernate.internal.SessionFactoryImpl.<init>(SessionFactoryImpl.java:498)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1743)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1781)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBuilder.buildSessionFactory(LocalSessionFactoryBuilder.java:247)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.buildSessionFactory(LocalSessionFactoryBean.java:373)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.afterPropertiesSet(LocalSessionFactoryBean.java:358)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1547)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1485)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:524)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:323)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:107)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1393)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1134)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:522)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:626)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.preInstantiateSingletons(MonitoredListableBeanFactory.java:71)
+ at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:932)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.finishBeanFactoryInitialization(MonitoredGenericApplicationContext.java:74)
+ at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:479)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.refresh(MonitoredGenericApplicationContext.java:102)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.setNewDataSource(CdmApplicationController.java:264)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.<init>(CdmApplicationController.java:204)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.NewInstance(CdmApplicationController.java:148)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.getApplicationController(CdmStoreConnector.java:151)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.run(CdmStoreConnector.java:99)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+06-15 17:38:37 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Constraint "_UNIQUEKEY" already exists; SQL statement:
+alter table TaxonBase add constraint _UniqueKey unique (uuid) [90045-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.command.ddl.AlterTableAddConstraint.tryUpdate(AlterTableAddConstraint.java:89)
+ at org.h2.command.ddl.AlterTableAddConstraint.update(AlterTableAddConstraint.java:68)
+ at org.h2.command.CommandContainer.update(CommandContainer.java:75)
+ at org.h2.command.Command.executeUpdate(Command.java:230)
+ at org.h2.jdbc.JdbcStatement.executeUpdateInternal(JdbcStatement.java:125)
+ at org.h2.jdbc.JdbcStatement.executeUpdate(JdbcStatement.java:110)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.hibernate.tool.hbm2ddl.DatabaseExporter.export(DatabaseExporter.java:64)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.perform(SchemaExport.java:418)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.execute(SchemaExport.java:375)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:304)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:293)
+ at org.hibernate.internal.SessionFactoryImpl.<init>(SessionFactoryImpl.java:498)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1743)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1781)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBuilder.buildSessionFactory(LocalSessionFactoryBuilder.java:247)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.buildSessionFactory(LocalSessionFactoryBean.java:373)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.afterPropertiesSet(LocalSessionFactoryBean.java:358)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1547)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1485)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:524)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:323)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:107)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1393)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1134)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:522)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:626)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.preInstantiateSingletons(MonitoredListableBeanFactory.java:71)
+ at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:932)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.finishBeanFactoryInitialization(MonitoredGenericApplicationContext.java:74)
+ at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:479)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.refresh(MonitoredGenericApplicationContext.java:102)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.setNewDataSource(CdmApplicationController.java:264)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.<init>(CdmApplicationController.java:204)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.NewInstance(CdmApplicationController.java:148)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.getApplicationController(CdmStoreConnector.java:151)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.run(CdmStoreConnector.java:99)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+06-15 17:38:37 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Constraint "_UNIQUEKEY" already exists; SQL statement:
+alter table TaxonNameBase add constraint _UniqueKey unique (uuid) [90045-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.command.ddl.AlterTableAddConstraint.tryUpdate(AlterTableAddConstraint.java:89)
+ at org.h2.command.ddl.AlterTableAddConstraint.update(AlterTableAddConstraint.java:68)
+ at org.h2.command.CommandContainer.update(CommandContainer.java:75)
+ at org.h2.command.Command.executeUpdate(Command.java:230)
+ at org.h2.jdbc.JdbcStatement.executeUpdateInternal(JdbcStatement.java:125)
+ at org.h2.jdbc.JdbcStatement.executeUpdate(JdbcStatement.java:110)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.hibernate.tool.hbm2ddl.DatabaseExporter.export(DatabaseExporter.java:64)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.perform(SchemaExport.java:418)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.execute(SchemaExport.java:375)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:304)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:293)
+ at org.hibernate.internal.SessionFactoryImpl.<init>(SessionFactoryImpl.java:498)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1743)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1781)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBuilder.buildSessionFactory(LocalSessionFactoryBuilder.java:247)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.buildSessionFactory(LocalSessionFactoryBean.java:373)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.afterPropertiesSet(LocalSessionFactoryBean.java:358)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1547)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1485)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:524)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:323)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:107)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1393)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1134)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:522)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:626)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.preInstantiateSingletons(MonitoredListableBeanFactory.java:71)
+ at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:932)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.finishBeanFactoryInitialization(MonitoredGenericApplicationContext.java:74)
+ at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:479)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.refresh(MonitoredGenericApplicationContext.java:102)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.setNewDataSource(CdmApplicationController.java:264)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.<init>(CdmApplicationController.java:204)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.NewInstance(CdmApplicationController.java:148)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.getApplicationController(CdmStoreConnector.java:151)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.run(CdmStoreConnector.java:99)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+06-15 17:38:37 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Constraint "_UNIQUEKEY" already exists; SQL statement:
+alter table TaxonNode add constraint _UniqueKey unique (uuid) [90045-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.command.ddl.AlterTableAddConstraint.tryUpdate(AlterTableAddConstraint.java:89)
+ at org.h2.command.ddl.AlterTableAddConstraint.update(AlterTableAddConstraint.java:68)
+ at org.h2.command.CommandContainer.update(CommandContainer.java:75)
+ at org.h2.command.Command.executeUpdate(Command.java:230)
+ at org.h2.jdbc.JdbcStatement.executeUpdateInternal(JdbcStatement.java:125)
+ at org.h2.jdbc.JdbcStatement.executeUpdate(JdbcStatement.java:110)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.hibernate.tool.hbm2ddl.DatabaseExporter.export(DatabaseExporter.java:64)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.perform(SchemaExport.java:418)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.execute(SchemaExport.java:375)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:304)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:293)
+ at org.hibernate.internal.SessionFactoryImpl.<init>(SessionFactoryImpl.java:498)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1743)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1781)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBuilder.buildSessionFactory(LocalSessionFactoryBuilder.java:247)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.buildSessionFactory(LocalSessionFactoryBean.java:373)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.afterPropertiesSet(LocalSessionFactoryBean.java:358)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1547)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1485)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:524)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:323)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:107)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1393)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1134)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:522)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:626)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.preInstantiateSingletons(MonitoredListableBeanFactory.java:71)
+ at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:932)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.finishBeanFactoryInitialization(MonitoredGenericApplicationContext.java:74)
+ at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:479)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.refresh(MonitoredGenericApplicationContext.java:102)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.setNewDataSource(CdmApplicationController.java:264)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.<init>(CdmApplicationController.java:204)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.NewInstance(CdmApplicationController.java:148)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.getApplicationController(CdmStoreConnector.java:151)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.run(CdmStoreConnector.java:99)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+06-15 17:38:37 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Constraint "_UNIQUEKEY" already exists; SQL statement:
+alter table TaxonNodeAgentRelation add constraint _UniqueKey unique (uuid) [90045-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.command.ddl.AlterTableAddConstraint.tryUpdate(AlterTableAddConstraint.java:89)
+ at org.h2.command.ddl.AlterTableAddConstraint.update(AlterTableAddConstraint.java:68)
+ at org.h2.command.CommandContainer.update(CommandContainer.java:75)
+ at org.h2.command.Command.executeUpdate(Command.java:230)
+ at org.h2.jdbc.JdbcStatement.executeUpdateInternal(JdbcStatement.java:125)
+ at org.h2.jdbc.JdbcStatement.executeUpdate(JdbcStatement.java:110)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.hibernate.tool.hbm2ddl.DatabaseExporter.export(DatabaseExporter.java:64)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.perform(SchemaExport.java:418)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.execute(SchemaExport.java:375)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:304)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:293)
+ at org.hibernate.internal.SessionFactoryImpl.<init>(SessionFactoryImpl.java:498)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1743)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1781)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBuilder.buildSessionFactory(LocalSessionFactoryBuilder.java:247)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.buildSessionFactory(LocalSessionFactoryBean.java:373)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.afterPropertiesSet(LocalSessionFactoryBean.java:358)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1547)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1485)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:524)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:323)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:107)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1393)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1134)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:522)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:626)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.preInstantiateSingletons(MonitoredListableBeanFactory.java:71)
+ at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:932)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.finishBeanFactoryInitialization(MonitoredGenericApplicationContext.java:74)
+ at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:479)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.refresh(MonitoredGenericApplicationContext.java:102)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.setNewDataSource(CdmApplicationController.java:264)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.<init>(CdmApplicationController.java:204)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.NewInstance(CdmApplicationController.java:148)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.getApplicationController(CdmStoreConnector.java:151)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.run(CdmStoreConnector.java:99)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+06-15 17:38:37 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Constraint "_UNIQUEKEY" already exists; SQL statement:
+alter table TaxonRelationship add constraint _UniqueKey unique (uuid) [90045-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.command.ddl.AlterTableAddConstraint.tryUpdate(AlterTableAddConstraint.java:89)
+ at org.h2.command.ddl.AlterTableAddConstraint.update(AlterTableAddConstraint.java:68)
+ at org.h2.command.CommandContainer.update(CommandContainer.java:75)
+ at org.h2.command.Command.executeUpdate(Command.java:230)
+ at org.h2.jdbc.JdbcStatement.executeUpdateInternal(JdbcStatement.java:125)
+ at org.h2.jdbc.JdbcStatement.executeUpdate(JdbcStatement.java:110)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.hibernate.tool.hbm2ddl.DatabaseExporter.export(DatabaseExporter.java:64)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.perform(SchemaExport.java:418)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.execute(SchemaExport.java:375)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:304)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:293)
+ at org.hibernate.internal.SessionFactoryImpl.<init>(SessionFactoryImpl.java:498)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1743)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1781)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBuilder.buildSessionFactory(LocalSessionFactoryBuilder.java:247)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.buildSessionFactory(LocalSessionFactoryBean.java:373)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.afterPropertiesSet(LocalSessionFactoryBean.java:358)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1547)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1485)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:524)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:323)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:107)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1393)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1134)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:522)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:626)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.preInstantiateSingletons(MonitoredListableBeanFactory.java:71)
+ at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:932)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.finishBeanFactoryInitialization(MonitoredGenericApplicationContext.java:74)
+ at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:479)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.refresh(MonitoredGenericApplicationContext.java:102)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.setNewDataSource(CdmApplicationController.java:264)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.<init>(CdmApplicationController.java:204)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.NewInstance(CdmApplicationController.java:148)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.getApplicationController(CdmStoreConnector.java:151)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.run(CdmStoreConnector.java:99)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+06-15 17:38:37 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Constraint "_UNIQUEKEY" already exists; SQL statement:
+alter table TermVocabulary add constraint _UniqueKey unique (uuid) [90045-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.command.ddl.AlterTableAddConstraint.tryUpdate(AlterTableAddConstraint.java:89)
+ at org.h2.command.ddl.AlterTableAddConstraint.update(AlterTableAddConstraint.java:68)
+ at org.h2.command.CommandContainer.update(CommandContainer.java:75)
+ at org.h2.command.Command.executeUpdate(Command.java:230)
+ at org.h2.jdbc.JdbcStatement.executeUpdateInternal(JdbcStatement.java:125)
+ at org.h2.jdbc.JdbcStatement.executeUpdate(JdbcStatement.java:110)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.hibernate.tool.hbm2ddl.DatabaseExporter.export(DatabaseExporter.java:64)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.perform(SchemaExport.java:418)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.execute(SchemaExport.java:375)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:304)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:293)
+ at org.hibernate.internal.SessionFactoryImpl.<init>(SessionFactoryImpl.java:498)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1743)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1781)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBuilder.buildSessionFactory(LocalSessionFactoryBuilder.java:247)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.buildSessionFactory(LocalSessionFactoryBean.java:373)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.afterPropertiesSet(LocalSessionFactoryBean.java:358)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1547)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1485)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:524)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:323)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:107)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1393)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1134)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:522)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:626)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.preInstantiateSingletons(MonitoredListableBeanFactory.java:71)
+ at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:932)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.finishBeanFactoryInitialization(MonitoredGenericApplicationContext.java:74)
+ at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:479)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.refresh(MonitoredGenericApplicationContext.java:102)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.setNewDataSource(CdmApplicationController.java:264)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.<init>(CdmApplicationController.java:204)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.NewInstance(CdmApplicationController.java:148)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.getApplicationController(CdmStoreConnector.java:151)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.run(CdmStoreConnector.java:99)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+06-15 17:38:37 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Constraint "_UNIQUEKEY" already exists; SQL statement:
+alter table TypeDesignationBase add constraint _UniqueKey unique (uuid) [90045-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.command.ddl.AlterTableAddConstraint.tryUpdate(AlterTableAddConstraint.java:89)
+ at org.h2.command.ddl.AlterTableAddConstraint.update(AlterTableAddConstraint.java:68)
+ at org.h2.command.CommandContainer.update(CommandContainer.java:75)
+ at org.h2.command.Command.executeUpdate(Command.java:230)
+ at org.h2.jdbc.JdbcStatement.executeUpdateInternal(JdbcStatement.java:125)
+ at org.h2.jdbc.JdbcStatement.executeUpdate(JdbcStatement.java:110)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.hibernate.tool.hbm2ddl.DatabaseExporter.export(DatabaseExporter.java:64)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.perform(SchemaExport.java:418)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.execute(SchemaExport.java:375)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:304)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:293)
+ at org.hibernate.internal.SessionFactoryImpl.<init>(SessionFactoryImpl.java:498)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1743)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1781)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBuilder.buildSessionFactory(LocalSessionFactoryBuilder.java:247)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.buildSessionFactory(LocalSessionFactoryBean.java:373)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.afterPropertiesSet(LocalSessionFactoryBean.java:358)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1547)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1485)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:524)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:323)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:107)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1393)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1134)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:522)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:626)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.preInstantiateSingletons(MonitoredListableBeanFactory.java:71)
+ at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:932)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.finishBeanFactoryInitialization(MonitoredGenericApplicationContext.java:74)
+ at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:479)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.refresh(MonitoredGenericApplicationContext.java:102)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.setNewDataSource(CdmApplicationController.java:264)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.<init>(CdmApplicationController.java:204)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.NewInstance(CdmApplicationController.java:148)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.getApplicationController(CdmStoreConnector.java:151)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.run(CdmStoreConnector.java:99)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+06-15 17:38:37 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Constraint "_UNIQUEKEY" already exists; SQL statement:
+alter table UserAccount add constraint _UniqueKey unique (uuid) [90045-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.command.ddl.AlterTableAddConstraint.tryUpdate(AlterTableAddConstraint.java:89)
+ at org.h2.command.ddl.AlterTableAddConstraint.update(AlterTableAddConstraint.java:68)
+ at org.h2.command.CommandContainer.update(CommandContainer.java:75)
+ at org.h2.command.Command.executeUpdate(Command.java:230)
+ at org.h2.jdbc.JdbcStatement.executeUpdateInternal(JdbcStatement.java:125)
+ at org.h2.jdbc.JdbcStatement.executeUpdate(JdbcStatement.java:110)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.hibernate.tool.hbm2ddl.DatabaseExporter.export(DatabaseExporter.java:64)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.perform(SchemaExport.java:418)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.execute(SchemaExport.java:375)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:304)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:293)
+ at org.hibernate.internal.SessionFactoryImpl.<init>(SessionFactoryImpl.java:498)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1743)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1781)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBuilder.buildSessionFactory(LocalSessionFactoryBuilder.java:247)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.buildSessionFactory(LocalSessionFactoryBean.java:373)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.afterPropertiesSet(LocalSessionFactoryBean.java:358)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1547)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1485)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:524)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:323)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:107)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1393)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1134)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:522)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:626)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.preInstantiateSingletons(MonitoredListableBeanFactory.java:71)
+ at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:932)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.finishBeanFactoryInitialization(MonitoredGenericApplicationContext.java:74)
+ at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:479)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.refresh(MonitoredGenericApplicationContext.java:102)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.setNewDataSource(CdmApplicationController.java:264)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.<init>(CdmApplicationController.java:204)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.NewInstance(CdmApplicationController.java:148)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.getApplicationController(CdmStoreConnector.java:151)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.run(CdmStoreConnector.java:99)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+06-15 17:38:37 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Constraint "_UNIQUEKEY" already exists; SQL statement:
+alter table WorkingSet add constraint _UniqueKey unique (uuid) [90045-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.command.ddl.AlterTableAddConstraint.tryUpdate(AlterTableAddConstraint.java:89)
+ at org.h2.command.ddl.AlterTableAddConstraint.update(AlterTableAddConstraint.java:68)
+ at org.h2.command.CommandContainer.update(CommandContainer.java:75)
+ at org.h2.command.Command.executeUpdate(Command.java:230)
+ at org.h2.jdbc.JdbcStatement.executeUpdateInternal(JdbcStatement.java:125)
+ at org.h2.jdbc.JdbcStatement.executeUpdate(JdbcStatement.java:110)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.hibernate.tool.hbm2ddl.DatabaseExporter.export(DatabaseExporter.java:64)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.perform(SchemaExport.java:418)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.execute(SchemaExport.java:375)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:304)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:293)
+ at org.hibernate.internal.SessionFactoryImpl.<init>(SessionFactoryImpl.java:498)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1743)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1781)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBuilder.buildSessionFactory(LocalSessionFactoryBuilder.java:247)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.buildSessionFactory(LocalSessionFactoryBean.java:373)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.afterPropertiesSet(LocalSessionFactoryBean.java:358)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1547)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1485)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:524)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:323)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:107)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1393)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1134)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:522)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:626)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.preInstantiateSingletons(MonitoredListableBeanFactory.java:71)
+ at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:932)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.finishBeanFactoryInitialization(MonitoredGenericApplicationContext.java:74)
+ at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:479)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.refresh(MonitoredGenericApplicationContext.java:102)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.setNewDataSource(CdmApplicationController.java:264)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.<init>(CdmApplicationController.java:204)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.NewInstance(CdmApplicationController.java:148)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.getApplicationController(CdmStoreConnector.java:151)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.run(CdmStoreConnector.java:99)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
--- /dev/null
+<?xml version="1.0"?>
+<abcd:DataSets xmlns:abcd="http://www.tdwg.org/schemas/abcd/2.06" xmlns:biocase="http://www.biocase.org/schemas/protocol/1.3" xmlns:ns1="http://www.dnabank-network.org/test" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://www.biocase.org/schemas/protocol/1.3 http://www.bgbm.org/biodivinf/schema/protocol_1_31.xsd">
+ <abcd:DataSet>
+ <abcd:DatasetGUID>www.floraweb.de/florkart/atlas/2007</abcd:DatasetGUID>
+ <abcd:TechnicalContacts>
+ <abcd:TechnicalContact>
+ <abcd:Name>Rudolf May</abcd:Name>
+ <abcd:Email>rudolf.may@bfn.de</abcd:Email>
+ <abcd:Phone>+49-228-84911441</abcd:Phone>
+ <abcd:Address>BfN, Konstantinstr. 110, D-53179 Bonn</abcd:Address>
+ </abcd:TechnicalContact>
+ </abcd:TechnicalContacts>
+ <abcd:ContentContacts>
+ <abcd:ContentContact>
+ <abcd:Name>Rudolf May</abcd:Name>
+ <abcd:Email>rudolf.may@bfn.de</abcd:Email>
+ <abcd:Phone>+49-228-84911441</abcd:Phone>
+ <abcd:Address>BfN, Konstantinstr. 110, D-53179 Bonn</abcd:Address>
+ </abcd:ContentContact>
+ </abcd:ContentContacts>
+ <abcd:Metadata>
+ <abcd:Description>
+ <abcd:Representation abcd:language="GE German Deutsch">
+ <abcd:Title>FlorKart - FlorenKartierung Gefaesspflanzen</abcd:Title>
+ <abcd:Details>Verbreitung der Farn- und Bluetenpflanzen in Deutschland, Vorkommensnachweise aggregiert auf Rasterfelder der Topographischen Karte im Massstab 1 : 25000 (TK25 = MTB), Blattschnitt 6 x 10 Minuten, sowie in Zeitperioden 'vor 1950', '1950 - 1980', '1980 - 2000'</abcd:Details>
+ <abcd:Coverage>Deutschland</abcd:Coverage>
+ <abcd:URI>http://www.floraweb.de</abcd:URI>
+ </abcd:Representation>
+ </abcd:Description>
+ <abcd:IconURI>http://www.floraweb.de/images/floraweb.gif</abcd:IconURI>
+ <abcd:Version>
+ <abcd:Major>2007</abcd:Major>
+ </abcd:Version>
+ <abcd:RevisionData>
+ <abcd:Creators>Netzwerk Phytodiversitaet Deutschlands (NetPhyD) und Bundesamt für Naturschutz (BfN)</abcd:Creators>
+ <abcd:Contributors>Alle ehrenamtlich an der Floristischen Kartierung Deutschlands beteiligten Mitarbeiter</abcd:Contributors>
+ <abcd:DateCreated>2007-01-01</abcd:DateCreated>
+ <abcd:DateModified>2010-01-01</abcd:DateModified>
+ </abcd:RevisionData>
+ <abcd:Owners>
+ <abcd:Owner>
+ <abcd:Organisation>
+ <abcd:Name>
+ <abcd:Representation abcd:language="GE German Deutsch">
+ <abcd:Text>Bundesamt für Naturschutz (BfN) und Netzwerk Phytodiversität Deutschlands (NetPhyD)</abcd:Text>
+ <abcd:Abbreviation>BfN/NetPhyD</abcd:Abbreviation>
+ </abcd:Representation>
+ </abcd:Name>
+ </abcd:Organisation>
+ <abcd:Person>
+ <abcd:FullName>Rudolf May</abcd:FullName>
+ </abcd:Person>
+ <abcd:Roles>
+ <abcd:Role>Project Manager</abcd:Role>
+ </abcd:Roles>
+ <abcd:Addresses>
+ <abcd:Address>BfN, Konstantinstr. 110, D-53179 Bonn</abcd:Address>
+ </abcd:Addresses>
+ <abcd:TelephoneNumbers>
+ <abcd:TelephoneNumber>
+ <abcd:Number>+49-228-84911441</abcd:Number>
+ <abcd:Device>voice</abcd:Device>
+ </abcd:TelephoneNumber>
+ </abcd:TelephoneNumbers>
+ <abcd:EmailAddresses>
+ <abcd:EmailAddress>floraweb@bfn.de</abcd:EmailAddress>
+ </abcd:EmailAddresses>
+ <abcd:URIs>
+ <abcd:URL>http://www.bfn.de</abcd:URL>
+ </abcd:URIs>
+ <abcd:LogoURI>http://www.bfn.de/fileadmin/global/templates/images/logo_bfn.gif</abcd:LogoURI>
+ </abcd:Owner>
+ </abcd:Owners>
+ <abcd:IPRStatements>
+ <abcd:IPRDeclarations>
+ <abcd:IPRDeclaration abcd:language="GE German Deutsch">
+ <abcd:Text>Mitarbeiter der Floristischen Kartierung Deutschlands</abcd:Text>
+ <abcd:Details>Alle amtlich und ehrenamtlich an der Floristischen Kartierung Deutschlands beteiligten Mitarbeiter</abcd:Details>
+ </abcd:IPRDeclaration>
+ </abcd:IPRDeclarations>
+ <abcd:Copyrights>
+ <abcd:Copyright abcd:language="GE German Deutsch">
+ <abcd:Text>BfN/NetPhyD</abcd:Text>
+ <abcd:Details>Bundesamt fuer Naturschutz und Netzwerk Phytodiversitaet Deutschlands</abcd:Details>
+ </abcd:Copyright>
+ </abcd:Copyrights>
+ <abcd:TermsOfUseStatements>
+ <abcd:TermsOfUse abcd:language="GE German Deutsch">
+ <abcd:Text>Bei Verwendung in Publikationen bitte die Datenquelle vollstaendig zitieren.</abcd:Text>
+ <abcd:Details>Bei Verwendung in Publikationen bitte die Datenquelle vollstaendig zitieren. Die Verwendung der Daten zu kommerziellen Zwecken wird untersagt.</abcd:Details>
+ </abcd:TermsOfUse>
+ </abcd:TermsOfUseStatements>
+ <abcd:Disclaimers>
+ <abcd:Disclaimer abcd:language="GE German Deutsch">
+ <abcd:Text>Fuer die Richtigkeit der Daten wird keine Gewaehrleistung uebernommen</abcd:Text>
+ <abcd:Details>Fuer die Richtigkeit der Daten wird keine Gewaehrleistung uebernommen</abcd:Details>
+ </abcd:Disclaimer>
+ </abcd:Disclaimers>
+ <abcd:Acknowledgements>
+ <abcd:Acknowledgement abcd:language="GE German Deutsch">
+ <abcd:Text>In Anerkennung der Leistungen der ehrenamtlichen Kartierer der Flora Deutschlands</abcd:Text>
+ <abcd:Details>Die Kompilation der Verbreitungsdaten beruht auf unentgeltlich erbrachten Kartierungsleistungen von über 2000 ehrenamtlichen Mitarbeitern der Floristischen Kartierung Deutschlands, die in zahlreichen regionalen Kartierungsprojekten organisiert sind.</abcd:Details>
+ <abcd:URI>http://www.floraweb.de/pflanzenarten/hintergrundtexte_florkart_organisation.html</abcd:URI>
+ </abcd:Acknowledgement>
+ </abcd:Acknowledgements>
+ <abcd:Citations>
+ <abcd:Citation abcd:language="GE German Deutsch">
+ <abcd:Text>Datenbank FLORKART, BfN und NetPhyD</abcd:Text>
+ <abcd:Details>Datenbank FLORKART der Floristischen Kartierung Deutschlands, Stand 2007, Bundesamt für Naturschutz (BfN) und Netzwerk Phytodiversitaet Deutschland (NetPhyD)</abcd:Details>
+ </abcd:Citation>
+ </abcd:Citations>
+ </abcd:IPRStatements>
+ </abcd:Metadata>
+ <abcd:Units>
+ <abcd:Unit>
+ <abcd:SourceInstitutionID>BfN</abcd:SourceInstitutionID>
+ <abcd:SourceID>FlorKart_BfN</abcd:SourceID>
+ <abcd:UnitID>1003121</abcd:UnitID>
+ <abcd:UnitReferences>
+ <abcd:UnitReference>
+ <abcd:TitleCitation>Datenbank FLORKART, BfN und NetPhyD</abcd:TitleCitation>
+ <abcd:CitationDetail>Datenbank FLORKART der Floristischen Kartierung Deutschlands, Stand 2007, Bundesamt für Naturschutz (BfN) und Netzwerk Phytodiversitaet Deutschland (NetPhyD)</abcd:CitationDetail>
+ </abcd:UnitReference>
+ </abcd:UnitReferences>
+ <abcd:Identifications>
+ <abcd:Identification>
+ <abcd:Result>
+ <abcd:TaxonIdentified>
+ <abcd:HigherTaxa>
+ <abcd:HigherTaxon>
+ <abcd:HigherTaxonName>Asteraceae</abcd:HigherTaxonName>
+ </abcd:HigherTaxon>
+ </abcd:HigherTaxa>
+ <abcd:ScientificName>
+ <abcd:FullScientificNameString>Cichorium calvum Asch.</abcd:FullScientificNameString>
+ <abcd:NameAtomised>
+ <abcd:Botanical>
+ <abcd:GenusOrMonomial>Cichorium</abcd:GenusOrMonomial>
+ <abcd:FirstEpithet>calvum</abcd:FirstEpithet>
+ <abcd:Rank>SPE</abcd:Rank>
+ <abcd:AuthorTeamParenthesis>Asch.</abcd:AuthorTeamParenthesis>
+ </abcd:Botanical>
+ </abcd:NameAtomised>
+ </abcd:ScientificName>
+ </abcd:TaxonIdentified>
+ </abcd:Result>
+ </abcd:Identification>
+ </abcd:Identifications>
+ <abcd:Gathering>
+ <abcd:DateTime>
+ <abcd:DateText>1950-1980</abcd:DateText>
+ <abcd:PeriodExplicit>false</abcd:PeriodExplicit>
+ </abcd:DateTime>
+ <abcd:Agents>
+ <abcd:GatheringAgentsText>Mitarbeiter der Floristischen Kartierung Deutschlands</abcd:GatheringAgentsText>
+ </abcd:Agents>
+ <abcd:LocalityText>MTB 3915: Bockhorst</abcd:LocalityText>
+ <abcd:Country>
+ <abcd:Name language="German">Deutschland</abcd:Name>
+ </abcd:Country>
+ <abcd:SiteCoordinateSets>
+ <abcd:SiteCoordinates>
+ <abcd:CoordinatesGrid>
+ <abcd:GridCellSystem>German TK25</abcd:GridCellSystem>
+ <abcd:GridCellCode>3915</abcd:GridCellCode>
+ </abcd:CoordinatesGrid>
+ <abcd:CoordinatesLatLong>
+ <abcd:LongitudeDecimal>8.25</abcd:LongitudeDecimal>
+ <abcd:LatitudeDecimal>52.06</abcd:LatitudeDecimal>
+ <abcd:AccuracyStatement>Mittelpunkte von TK25-Rasterfeldern</abcd:AccuracyStatement>
+ <abcd:CoordinateErrorDistanceInMeters>6363</abcd:CoordinateErrorDistanceInMeters>
+ </abcd:CoordinatesLatLong>
+ </abcd:SiteCoordinates>
+ </abcd:SiteCoordinateSets>
+ </abcd:Gathering>
+ </abcd:Unit>
+ <abcd:Unit>
+ <abcd:SourceInstitutionID>BfN</abcd:SourceInstitutionID>
+ <abcd:SourceID>FlorKart_BfN</abcd:SourceID>
+ <abcd:UnitID>1003122</abcd:UnitID>
+ <abcd:UnitReferences>
+ <abcd:UnitReference>
+ <abcd:TitleCitation>Datenbank FLORKART, BfN und NetPhyD</abcd:TitleCitation>
+ <abcd:CitationDetail>Datenbank FLORKART der Floristischen Kartierung Deutschlands, Stand 2007, Bundesamt für Naturschutz (BfN) und Netzwerk Phytodiversitaet Deutschland (NetPhyD)</abcd:CitationDetail>
+ </abcd:UnitReference>
+ </abcd:UnitReferences>
+ <abcd:Identifications>
+ <abcd:Identification>
+ <abcd:Result>
+ <abcd:TaxonIdentified>
+ <abcd:HigherTaxa>
+ <abcd:HigherTaxon>
+ <abcd:HigherTaxonName>Asteraceae</abcd:HigherTaxonName>
+ </abcd:HigherTaxon>
+ </abcd:HigherTaxa>
+ <abcd:ScientificName>
+ <abcd:FullScientificNameString>Cichorium calvum Asch.</abcd:FullScientificNameString>
+ <abcd:NameAtomised>
+ <abcd:Botanical>
+ <abcd:GenusOrMonomial>Cichorium</abcd:GenusOrMonomial>
+ <abcd:FirstEpithet>calvum</abcd:FirstEpithet>
+ <abcd:Rank>SPE</abcd:Rank>
+ <abcd:AuthorTeamParenthesis>Asch.</abcd:AuthorTeamParenthesis>
+ </abcd:Botanical>
+ </abcd:NameAtomised>
+ </abcd:ScientificName>
+ </abcd:TaxonIdentified>
+ </abcd:Result>
+ </abcd:Identification>
+ </abcd:Identifications>
+ <abcd:Gathering>
+ <abcd:DateTime>
+ <abcd:DateText>1950-1980</abcd:DateText>
+ <abcd:PeriodExplicit>false</abcd:PeriodExplicit>
+ </abcd:DateTime>
+ <abcd:Agents>
+ <abcd:GatheringAgentsText>Mitarbeiter der Floristischen Kartierung Deutschlands</abcd:GatheringAgentsText>
+ </abcd:Agents>
+ <abcd:LocalityText>MTB 3916: Halle (Westfalen)</abcd:LocalityText>
+ <abcd:Country>
+ <abcd:Name language="German">Deutschland</abcd:Name>
+ </abcd:Country>
+ <abcd:SiteCoordinateSets>
+ <abcd:SiteCoordinates>
+ <abcd:CoordinatesGrid>
+ <abcd:GridCellSystem>German TK25</abcd:GridCellSystem>
+ <abcd:GridCellCode>3916</abcd:GridCellCode>
+ </abcd:CoordinatesGrid>
+ <abcd:CoordinatesLatLong>
+ <abcd:LongitudeDecimal>8.42</abcd:LongitudeDecimal>
+ <abcd:LatitudeDecimal>52.06</abcd:LatitudeDecimal>
+ <abcd:AccuracyStatement>Mittelpunkte von TK25-Rasterfeldern</abcd:AccuracyStatement>
+ <abcd:CoordinateErrorDistanceInMeters>6363</abcd:CoordinateErrorDistanceInMeters>
+ </abcd:CoordinatesLatLong>
+ </abcd:SiteCoordinates>
+ </abcd:SiteCoordinateSets>
+ </abcd:Gathering>
+ </abcd:Unit>
+ <abcd:Unit>
+ <abcd:SourceInstitutionID>BfN</abcd:SourceInstitutionID>
+ <abcd:SourceID>FlorKart_BfN</abcd:SourceID>
+ <abcd:UnitID>1003123</abcd:UnitID>
+ <abcd:UnitReferences>
+ <abcd:UnitReference>
+ <abcd:TitleCitation>Datenbank FLORKART, BfN und NetPhyD</abcd:TitleCitation>
+ <abcd:CitationDetail>Datenbank FLORKART der Floristischen Kartierung Deutschlands, Stand 2007, Bundesamt für Naturschutz (BfN) und Netzwerk Phytodiversitaet Deutschland (NetPhyD)</abcd:CitationDetail>
+ </abcd:UnitReference>
+ </abcd:UnitReferences>
+ <abcd:Identifications>
+ <abcd:Identification>
+ <abcd:Result>
+ <abcd:TaxonIdentified>
+ <abcd:HigherTaxa>
+ <abcd:HigherTaxon>
+ <abcd:HigherTaxonName>Asteraceae</abcd:HigherTaxonName>
+ </abcd:HigherTaxon>
+ </abcd:HigherTaxa>
+ <abcd:ScientificName>
+ <abcd:FullScientificNameString>Cichorium calvum Asch.</abcd:FullScientificNameString>
+ <abcd:NameAtomised>
+ <abcd:Botanical>
+ <abcd:GenusOrMonomial>Cichorium</abcd:GenusOrMonomial>
+ <abcd:FirstEpithet>calvum</abcd:FirstEpithet>
+ <abcd:Rank>SPE</abcd:Rank>
+ <abcd:AuthorTeamParenthesis>Asch.</abcd:AuthorTeamParenthesis>
+ </abcd:Botanical>
+ </abcd:NameAtomised>
+ </abcd:ScientificName>
+ </abcd:TaxonIdentified>
+ </abcd:Result>
+ </abcd:Identification>
+ </abcd:Identifications>
+ <abcd:Gathering>
+ <abcd:DateTime>
+ <abcd:DateText>1950-1980</abcd:DateText>
+ <abcd:PeriodExplicit>false</abcd:PeriodExplicit>
+ </abcd:DateTime>
+ <abcd:Agents>
+ <abcd:GatheringAgentsText>Mitarbeiter der Floristischen Kartierung Deutschlands</abcd:GatheringAgentsText>
+ </abcd:Agents>
+ <abcd:LocalityText>MTB 5628: Bad Königshofen im Grabfeld</abcd:LocalityText>
+ <abcd:Country>
+ <abcd:Name language="German">Deutschland</abcd:Name>
+ </abcd:Country>
+ <abcd:SiteCoordinateSets>
+ <abcd:SiteCoordinates>
+ <abcd:CoordinatesGrid>
+ <abcd:GridCellSystem>German TK25</abcd:GridCellSystem>
+ <abcd:GridCellCode>5628</abcd:GridCellCode>
+ </abcd:CoordinatesGrid>
+ <abcd:CoordinatesLatLong>
+ <abcd:LongitudeDecimal>10.42</abcd:LongitudeDecimal>
+ <abcd:LatitudeDecimal>50.36</abcd:LatitudeDecimal>
+ <abcd:AccuracyStatement>Mittelpunkte von TK25-Rasterfeldern</abcd:AccuracyStatement>
+ <abcd:CoordinateErrorDistanceInMeters>6481</abcd:CoordinateErrorDistanceInMeters>
+ </abcd:CoordinatesLatLong>
+ </abcd:SiteCoordinates>
+ </abcd:SiteCoordinateSets>
+ </abcd:Gathering>
+ </abcd:Unit>
+ <abcd:Unit>
+ <abcd:SourceInstitutionID>BfN</abcd:SourceInstitutionID>
+ <abcd:SourceID>FlorKart_BfN</abcd:SourceID>
+ <abcd:UnitID>1003124</abcd:UnitID>
+ <abcd:UnitReferences>
+ <abcd:UnitReference>
+ <abcd:TitleCitation>Datenbank FLORKART, BfN und NetPhyD</abcd:TitleCitation>
+ <abcd:CitationDetail>Datenbank FLORKART der Floristischen Kartierung Deutschlands, Stand 2007, Bundesamt für Naturschutz (BfN) und Netzwerk Phytodiversitaet Deutschland (NetPhyD)</abcd:CitationDetail>
+ </abcd:UnitReference>
+ </abcd:UnitReferences>
+ <abcd:Identifications>
+ <abcd:Identification>
+ <abcd:Result>
+ <abcd:TaxonIdentified>
+ <abcd:HigherTaxa>
+ <abcd:HigherTaxon>
+ <abcd:HigherTaxonName>Asteraceae</abcd:HigherTaxonName>
+ </abcd:HigherTaxon>
+ </abcd:HigherTaxa>
+ <abcd:ScientificName>
+ <abcd:FullScientificNameString>Cichorium calvum Asch.</abcd:FullScientificNameString>
+ <abcd:NameAtomised>
+ <abcd:Botanical>
+ <abcd:GenusOrMonomial>Cichorium</abcd:GenusOrMonomial>
+ <abcd:FirstEpithet>calvum</abcd:FirstEpithet>
+ <abcd:Rank>SPE</abcd:Rank>
+ <abcd:AuthorTeamParenthesis>Asch.</abcd:AuthorTeamParenthesis>
+ </abcd:Botanical>
+ </abcd:NameAtomised>
+ </abcd:ScientificName>
+ </abcd:TaxonIdentified>
+ </abcd:Result>
+ </abcd:Identification>
+ </abcd:Identifications>
+ <abcd:Gathering>
+ <abcd:DateTime>
+ <abcd:DateText>1950-1980</abcd:DateText>
+ <abcd:PeriodExplicit>false</abcd:PeriodExplicit>
+ </abcd:DateTime>
+ <abcd:Agents>
+ <abcd:GatheringAgentsText>Mitarbeiter der Floristischen Kartierung Deutschlands</abcd:GatheringAgentsText>
+ </abcd:Agents>
+ <abcd:LocalityText>MTB 5634: Teuschnitz</abcd:LocalityText>
+ <abcd:Country>
+ <abcd:Name language="German">Deutschland</abcd:Name>
+ </abcd:Country>
+ <abcd:SiteCoordinateSets>
+ <abcd:SiteCoordinates>
+ <abcd:CoordinatesGrid>
+ <abcd:GridCellSystem>German TK25</abcd:GridCellSystem>
+ <abcd:GridCellCode>5634</abcd:GridCellCode>
+ </abcd:CoordinatesGrid>
+ <abcd:CoordinatesLatLong>
+ <abcd:LongitudeDecimal>11.42</abcd:LongitudeDecimal>
+ <abcd:LatitudeDecimal>50.36</abcd:LatitudeDecimal>
+ <abcd:AccuracyStatement>Mittelpunkte von TK25-Rasterfeldern</abcd:AccuracyStatement>
+ <abcd:CoordinateErrorDistanceInMeters>6482</abcd:CoordinateErrorDistanceInMeters>
+ </abcd:CoordinatesLatLong>
+ </abcd:SiteCoordinates>
+ </abcd:SiteCoordinateSets>
+ </abcd:Gathering>
+ </abcd:Unit>
+ <abcd:Unit>
+ <abcd:SourceInstitutionID>BfN</abcd:SourceInstitutionID>
+ <abcd:SourceID>FlorKart_BfN</abcd:SourceID>
+ <abcd:UnitID>1003125</abcd:UnitID>
+ <abcd:UnitReferences>
+ <abcd:UnitReference>
+ <abcd:TitleCitation>Datenbank FLORKART, BfN und NetPhyD</abcd:TitleCitation>
+ <abcd:CitationDetail>Datenbank FLORKART der Floristischen Kartierung Deutschlands, Stand 2007, Bundesamt für Naturschutz (BfN) und Netzwerk Phytodiversitaet Deutschland (NetPhyD)</abcd:CitationDetail>
+ </abcd:UnitReference>
+ </abcd:UnitReferences>
+ <abcd:Identifications>
+ <abcd:Identification>
+ <abcd:Result>
+ <abcd:TaxonIdentified>
+ <abcd:HigherTaxa>
+ <abcd:HigherTaxon>
+ <abcd:HigherTaxonName>Asteraceae</abcd:HigherTaxonName>
+ </abcd:HigherTaxon>
+ </abcd:HigherTaxa>
+ <abcd:ScientificName>
+ <abcd:FullScientificNameString>Cichorium calvum Asch.</abcd:FullScientificNameString>
+ <abcd:NameAtomised>
+ <abcd:Botanical>
+ <abcd:GenusOrMonomial>Cichorium</abcd:GenusOrMonomial>
+ <abcd:FirstEpithet>calvum</abcd:FirstEpithet>
+ <abcd:Rank>SPE</abcd:Rank>
+ <abcd:AuthorTeamParenthesis>Asch.</abcd:AuthorTeamParenthesis>
+ </abcd:Botanical>
+ </abcd:NameAtomised>
+ </abcd:ScientificName>
+ </abcd:TaxonIdentified>
+ </abcd:Result>
+ </abcd:Identification>
+ </abcd:Identifications>
+ <abcd:Gathering>
+ <abcd:DateTime>
+ <abcd:DateText>1950-1980</abcd:DateText>
+ <abcd:PeriodExplicit>false</abcd:PeriodExplicit>
+ </abcd:DateTime>
+ <abcd:Agents>
+ <abcd:GatheringAgentsText>Mitarbeiter der Floristischen Kartierung Deutschlands</abcd:GatheringAgentsText>
+ </abcd:Agents>
+ <abcd:LocalityText>MTB 5635: Nordhalben</abcd:LocalityText>
+ <abcd:Country>
+ <abcd:Name language="German">Deutschland</abcd:Name>
+ </abcd:Country>
+ <abcd:SiteCoordinateSets>
+ <abcd:SiteCoordinates>
+ <abcd:CoordinatesGrid>
+ <abcd:GridCellSystem>German TK25</abcd:GridCellSystem>
+ <abcd:GridCellCode>5635</abcd:GridCellCode>
+ </abcd:CoordinatesGrid>
+ <abcd:CoordinatesLatLong>
+ <abcd:LongitudeDecimal>11.58</abcd:LongitudeDecimal>
+ <abcd:LatitudeDecimal>50.36</abcd:LatitudeDecimal>
+ <abcd:AccuracyStatement>Mittelpunkte von TK25-Rasterfeldern</abcd:AccuracyStatement>
+ <abcd:CoordinateErrorDistanceInMeters>6483</abcd:CoordinateErrorDistanceInMeters>
+ </abcd:CoordinatesLatLong>
+ </abcd:SiteCoordinates>
+ </abcd:SiteCoordinateSets>
+ </abcd:Gathering>
+ </abcd:Unit>
+ <abcd:Unit>
+ <abcd:SourceInstitutionID>BfN</abcd:SourceInstitutionID>
+ <abcd:SourceID>FlorKart_BfN</abcd:SourceID>
+ <abcd:UnitID>1003126</abcd:UnitID>
+ <abcd:UnitReferences>
+ <abcd:UnitReference>
+ <abcd:TitleCitation>Datenbank FLORKART, BfN und NetPhyD</abcd:TitleCitation>
+ <abcd:CitationDetail>Datenbank FLORKART der Floristischen Kartierung Deutschlands, Stand 2007, Bundesamt für Naturschutz (BfN) und Netzwerk Phytodiversitaet Deutschland (NetPhyD)</abcd:CitationDetail>
+ </abcd:UnitReference>
+ </abcd:UnitReferences>
+ <abcd:Identifications>
+ <abcd:Identification>
+ <abcd:Result>
+ <abcd:TaxonIdentified>
+ <abcd:HigherTaxa>
+ <abcd:HigherTaxon>
+ <abcd:HigherTaxonName>Asteraceae</abcd:HigherTaxonName>
+ </abcd:HigherTaxon>
+ </abcd:HigherTaxa>
+ <abcd:ScientificName>
+ <abcd:FullScientificNameString>Cichorium calvum Asch.</abcd:FullScientificNameString>
+ <abcd:NameAtomised>
+ <abcd:Botanical>
+ <abcd:GenusOrMonomial>Cichorium</abcd:GenusOrMonomial>
+ <abcd:FirstEpithet>calvum</abcd:FirstEpithet>
+ <abcd:Rank>SPE</abcd:Rank>
+ <abcd:AuthorTeamParenthesis>Asch.</abcd:AuthorTeamParenthesis>
+ </abcd:Botanical>
+ </abcd:NameAtomised>
+ </abcd:ScientificName>
+ </abcd:TaxonIdentified>
+ </abcd:Result>
+ </abcd:Identification>
+ </abcd:Identifications>
+ <abcd:Gathering>
+ <abcd:DateTime>
+ <abcd:DateText>1950-1980</abcd:DateText>
+ <abcd:PeriodExplicit>false</abcd:PeriodExplicit>
+ </abcd:DateTime>
+ <abcd:Agents>
+ <abcd:GatheringAgentsText>Mitarbeiter der Floristischen Kartierung Deutschlands</abcd:GatheringAgentsText>
+ </abcd:Agents>
+ <abcd:LocalityText>MTB 5728: Oberlauringen</abcd:LocalityText>
+ <abcd:Country>
+ <abcd:Name language="German">Deutschland</abcd:Name>
+ </abcd:Country>
+ <abcd:SiteCoordinateSets>
+ <abcd:SiteCoordinates>
+ <abcd:CoordinatesGrid>
+ <abcd:GridCellSystem>German TK25</abcd:GridCellSystem>
+ <abcd:GridCellCode>5728</abcd:GridCellCode>
+ </abcd:CoordinatesGrid>
+ <abcd:CoordinatesLatLong>
+ <abcd:LongitudeDecimal>10.42</abcd:LongitudeDecimal>
+ <abcd:LatitudeDecimal>50.26</abcd:LatitudeDecimal>
+ <abcd:AccuracyStatement>Mittelpunkte von TK25-Rasterfeldern</abcd:AccuracyStatement>
+ <abcd:CoordinateErrorDistanceInMeters>6487</abcd:CoordinateErrorDistanceInMeters>
+ </abcd:CoordinatesLatLong>
+ </abcd:SiteCoordinates>
+ </abcd:SiteCoordinateSets>
+ </abcd:Gathering>
+ </abcd:Unit>
+ <abcd:Unit>
+ <abcd:SourceInstitutionID>BfN</abcd:SourceInstitutionID>
+ <abcd:SourceID>FlorKart_BfN</abcd:SourceID>
+ <abcd:UnitID>1003127</abcd:UnitID>
+ <abcd:UnitReferences>
+ <abcd:UnitReference>
+ <abcd:TitleCitation>Datenbank FLORKART, BfN und NetPhyD</abcd:TitleCitation>
+ <abcd:CitationDetail>Datenbank FLORKART der Floristischen Kartierung Deutschlands, Stand 2007, Bundesamt für Naturschutz (BfN) und Netzwerk Phytodiversitaet Deutschland (NetPhyD)</abcd:CitationDetail>
+ </abcd:UnitReference>
+ </abcd:UnitReferences>
+ <abcd:Identifications>
+ <abcd:Identification>
+ <abcd:Result>
+ <abcd:TaxonIdentified>
+ <abcd:HigherTaxa>
+ <abcd:HigherTaxon>
+ <abcd:HigherTaxonName>Asteraceae</abcd:HigherTaxonName>
+ </abcd:HigherTaxon>
+ </abcd:HigherTaxa>
+ <abcd:ScientificName>
+ <abcd:FullScientificNameString>Cichorium calvum Asch.</abcd:FullScientificNameString>
+ <abcd:NameAtomised>
+ <abcd:Botanical>
+ <abcd:GenusOrMonomial>Cichorium</abcd:GenusOrMonomial>
+ <abcd:FirstEpithet>calvum</abcd:FirstEpithet>
+ <abcd:Rank>SPE</abcd:Rank>
+ <abcd:AuthorTeamParenthesis>Asch.</abcd:AuthorTeamParenthesis>
+ </abcd:Botanical>
+ </abcd:NameAtomised>
+ </abcd:ScientificName>
+ </abcd:TaxonIdentified>
+ </abcd:Result>
+ </abcd:Identification>
+ </abcd:Identifications>
+ <abcd:Gathering>
+ <abcd:DateTime>
+ <abcd:DateText>1950-1980</abcd:DateText>
+ <abcd:PeriodExplicit>false</abcd:PeriodExplicit>
+ </abcd:DateTime>
+ <abcd:Agents>
+ <abcd:GatheringAgentsText>Mitarbeiter der Floristischen Kartierung Deutschlands</abcd:GatheringAgentsText>
+ </abcd:Agents>
+ <abcd:LocalityText>MTB 6132: Buttenheim</abcd:LocalityText>
+ <abcd:Country>
+ <abcd:Name language="German">Deutschland</abcd:Name>
+ </abcd:Country>
+ <abcd:SiteCoordinateSets>
+ <abcd:SiteCoordinates>
+ <abcd:CoordinatesGrid>
+ <abcd:GridCellSystem>German TK25</abcd:GridCellSystem>
+ <abcd:GridCellCode>6132</abcd:GridCellCode>
+ </abcd:CoordinatesGrid>
+ <abcd:CoordinatesLatLong>
+ <abcd:LongitudeDecimal>11.08</abcd:LongitudeDecimal>
+ <abcd:LatitudeDecimal>49.86</abcd:LatitudeDecimal>
+ <abcd:AccuracyStatement>Mittelpunkte von TK25-Rasterfeldern</abcd:AccuracyStatement>
+ <abcd:CoordinateErrorDistanceInMeters>6515</abcd:CoordinateErrorDistanceInMeters>
+ </abcd:CoordinatesLatLong>
+ </abcd:SiteCoordinates>
+ </abcd:SiteCoordinateSets>
+ </abcd:Gathering>
+ </abcd:Unit>
+ <abcd:Unit>
+ <abcd:SourceInstitutionID>BfN</abcd:SourceInstitutionID>
+ <abcd:SourceID>FlorKart_BfN</abcd:SourceID>
+ <abcd:UnitID>1003128</abcd:UnitID>
+ <abcd:UnitReferences>
+ <abcd:UnitReference>
+ <abcd:TitleCitation>Datenbank FLORKART, BfN und NetPhyD</abcd:TitleCitation>
+ <abcd:CitationDetail>Datenbank FLORKART der Floristischen Kartierung Deutschlands, Stand 2007, Bundesamt für Naturschutz (BfN) und Netzwerk Phytodiversitaet Deutschland (NetPhyD)</abcd:CitationDetail>
+ </abcd:UnitReference>
+ </abcd:UnitReferences>
+ <abcd:Identifications>
+ <abcd:Identification>
+ <abcd:Result>
+ <abcd:TaxonIdentified>
+ <abcd:HigherTaxa>
+ <abcd:HigherTaxon>
+ <abcd:HigherTaxonName>Asteraceae</abcd:HigherTaxonName>
+ </abcd:HigherTaxon>
+ </abcd:HigherTaxa>
+ <abcd:ScientificName>
+ <abcd:FullScientificNameString>Cichorium calvum Asch.</abcd:FullScientificNameString>
+ <abcd:NameAtomised>
+ <abcd:Botanical>
+ <abcd:GenusOrMonomial>Cichorium</abcd:GenusOrMonomial>
+ <abcd:FirstEpithet>calvum</abcd:FirstEpithet>
+ <abcd:Rank>SPE</abcd:Rank>
+ <abcd:AuthorTeamParenthesis>Asch.</abcd:AuthorTeamParenthesis>
+ </abcd:Botanical>
+ </abcd:NameAtomised>
+ </abcd:ScientificName>
+ </abcd:TaxonIdentified>
+ </abcd:Result>
+ </abcd:Identification>
+ </abcd:Identifications>
+ <abcd:Gathering>
+ <abcd:DateTime>
+ <abcd:DateText>1950-1980</abcd:DateText>
+ <abcd:PeriodExplicit>false</abcd:PeriodExplicit>
+ </abcd:DateTime>
+ <abcd:Agents>
+ <abcd:GatheringAgentsText>Mitarbeiter der Floristischen Kartierung Deutschlands</abcd:GatheringAgentsText>
+ </abcd:Agents>
+ <abcd:LocalityText>MTB 6232: Forchheim</abcd:LocalityText>
+ <abcd:Country>
+ <abcd:Name language="German">Deutschland</abcd:Name>
+ </abcd:Country>
+ <abcd:SiteCoordinateSets>
+ <abcd:SiteCoordinates>
+ <abcd:CoordinatesGrid>
+ <abcd:GridCellSystem>German TK25</abcd:GridCellSystem>
+ <abcd:GridCellCode>6232</abcd:GridCellCode>
+ </abcd:CoordinatesGrid>
+ <abcd:CoordinatesLatLong>
+ <abcd:LongitudeDecimal>11.08</abcd:LongitudeDecimal>
+ <abcd:LatitudeDecimal>49.76</abcd:LatitudeDecimal>
+ <abcd:AccuracyStatement>Mittelpunkte von TK25-Rasterfeldern</abcd:AccuracyStatement>
+ <abcd:CoordinateErrorDistanceInMeters>6522</abcd:CoordinateErrorDistanceInMeters>
+ </abcd:CoordinatesLatLong>
+ </abcd:SiteCoordinates>
+ </abcd:SiteCoordinateSets>
+ </abcd:Gathering>
+ </abcd:Unit>
+ <abcd:Unit>
+ <abcd:SourceInstitutionID>BfN</abcd:SourceInstitutionID>
+ <abcd:SourceID>FlorKart_BfN</abcd:SourceID>
+ <abcd:UnitID>1003129</abcd:UnitID>
+ <abcd:UnitReferences>
+ <abcd:UnitReference>
+ <abcd:TitleCitation>Datenbank FLORKART, BfN und NetPhyD</abcd:TitleCitation>
+ <abcd:CitationDetail>Datenbank FLORKART der Floristischen Kartierung Deutschlands, Stand 2007, Bundesamt für Naturschutz (BfN) und Netzwerk Phytodiversitaet Deutschland (NetPhyD)</abcd:CitationDetail>
+ </abcd:UnitReference>
+ </abcd:UnitReferences>
+ <abcd:Identifications>
+ <abcd:Identification>
+ <abcd:Result>
+ <abcd:TaxonIdentified>
+ <abcd:HigherTaxa>
+ <abcd:HigherTaxon>
+ <abcd:HigherTaxonName>Asteraceae</abcd:HigherTaxonName>
+ </abcd:HigherTaxon>
+ </abcd:HigherTaxa>
+ <abcd:ScientificName>
+ <abcd:FullScientificNameString>Cichorium calvum Asch.</abcd:FullScientificNameString>
+ <abcd:NameAtomised>
+ <abcd:Botanical>
+ <abcd:GenusOrMonomial>Cichorium</abcd:GenusOrMonomial>
+ <abcd:FirstEpithet>calvum</abcd:FirstEpithet>
+ <abcd:Rank>SPE</abcd:Rank>
+ <abcd:AuthorTeamParenthesis>Asch.</abcd:AuthorTeamParenthesis>
+ </abcd:Botanical>
+ </abcd:NameAtomised>
+ </abcd:ScientificName>
+ </abcd:TaxonIdentified>
+ </abcd:Result>
+ </abcd:Identification>
+ </abcd:Identifications>
+ <abcd:Gathering>
+ <abcd:DateTime>
+ <abcd:DateText>1950-1980</abcd:DateText>
+ <abcd:PeriodExplicit>false</abcd:PeriodExplicit>
+ </abcd:DateTime>
+ <abcd:Agents>
+ <abcd:GatheringAgentsText>Mitarbeiter der Floristischen Kartierung Deutschlands</abcd:GatheringAgentsText>
+ </abcd:Agents>
+ <abcd:LocalityText>MTB 6235: Pegnitz</abcd:LocalityText>
+ <abcd:Country>
+ <abcd:Name language="German">Deutschland</abcd:Name>
+ </abcd:Country>
+ <abcd:SiteCoordinateSets>
+ <abcd:SiteCoordinates>
+ <abcd:CoordinatesGrid>
+ <abcd:GridCellSystem>German TK25</abcd:GridCellSystem>
+ <abcd:GridCellCode>6235</abcd:GridCellCode>
+ </abcd:CoordinatesGrid>
+ <abcd:CoordinatesLatLong>
+ <abcd:LongitudeDecimal>11.58</abcd:LongitudeDecimal>
+ <abcd:LatitudeDecimal>49.76</abcd:LatitudeDecimal>
+ <abcd:AccuracyStatement>Mittelpunkte von TK25-Rasterfeldern</abcd:AccuracyStatement>
+ <abcd:CoordinateErrorDistanceInMeters>6523</abcd:CoordinateErrorDistanceInMeters>
+ </abcd:CoordinatesLatLong>
+ </abcd:SiteCoordinates>
+ </abcd:SiteCoordinateSets>
+ </abcd:Gathering>
+ </abcd:Unit>
+ <abcd:Unit>
+ <abcd:SourceInstitutionID>BfN</abcd:SourceInstitutionID>
+ <abcd:SourceID>FlorKart_BfN</abcd:SourceID>
+ <abcd:UnitID>1003130</abcd:UnitID>
+ <abcd:UnitReferences>
+ <abcd:UnitReference>
+ <abcd:TitleCitation>Datenbank FLORKART, BfN und NetPhyD</abcd:TitleCitation>
+ <abcd:CitationDetail>Datenbank FLORKART der Floristischen Kartierung Deutschlands, Stand 2007, Bundesamt für Naturschutz (BfN) und Netzwerk Phytodiversitaet Deutschland (NetPhyD)</abcd:CitationDetail>
+ </abcd:UnitReference>
+ </abcd:UnitReferences>
+ <abcd:Identifications>
+ <abcd:Identification>
+ <abcd:Result>
+ <abcd:TaxonIdentified>
+ <abcd:HigherTaxa>
+ <abcd:HigherTaxon>
+ <abcd:HigherTaxonName>Asteraceae</abcd:HigherTaxonName>
+ </abcd:HigherTaxon>
+ </abcd:HigherTaxa>
+ <abcd:ScientificName>
+ <abcd:FullScientificNameString>Cichorium calvum Asch.</abcd:FullScientificNameString>
+ <abcd:NameAtomised>
+ <abcd:Botanical>
+ <abcd:GenusOrMonomial>Cichorium</abcd:GenusOrMonomial>
+ <abcd:FirstEpithet>calvum</abcd:FirstEpithet>
+ <abcd:Rank>SPE</abcd:Rank>
+ <abcd:AuthorTeamParenthesis>Asch.</abcd:AuthorTeamParenthesis>
+ </abcd:Botanical>
+ </abcd:NameAtomised>
+ </abcd:ScientificName>
+ </abcd:TaxonIdentified>
+ </abcd:Result>
+ </abcd:Identification>
+ </abcd:Identifications>
+ <abcd:Gathering>
+ <abcd:DateTime>
+ <abcd:DateText>1950-1980</abcd:DateText>
+ <abcd:PeriodExplicit>false</abcd:PeriodExplicit>
+ </abcd:DateTime>
+ <abcd:Agents>
+ <abcd:GatheringAgentsText>Mitarbeiter der Floristischen Kartierung Deutschlands</abcd:GatheringAgentsText>
+ </abcd:Agents>
+ <abcd:LocalityText>MTB 7032: Bieswang</abcd:LocalityText>
+ <abcd:Country>
+ <abcd:Name language="German">Deutschland</abcd:Name>
+ </abcd:Country>
+ <abcd:SiteCoordinateSets>
+ <abcd:SiteCoordinates>
+ <abcd:CoordinatesGrid>
+ <abcd:GridCellSystem>German TK25</abcd:GridCellSystem>
+ <abcd:GridCellCode>7032</abcd:GridCellCode>
+ </abcd:CoordinatesGrid>
+ <abcd:CoordinatesLatLong>
+ <abcd:LongitudeDecimal>11.08</abcd:LongitudeDecimal>
+ <abcd:LatitudeDecimal>48.96</abcd:LatitudeDecimal>
+ <abcd:AccuracyStatement>Mittelpunkte von TK25-Rasterfeldern</abcd:AccuracyStatement>
+ <abcd:CoordinateErrorDistanceInMeters>6575</abcd:CoordinateErrorDistanceInMeters>
+ </abcd:CoordinatesLatLong>
+ </abcd:SiteCoordinates>
+ </abcd:SiteCoordinateSets>
+ </abcd:Gathering>
+ </abcd:Unit>
+ </abcd:Units>
+ </abcd:DataSet>
+ </abcd:DataSets>
--- /dev/null
+<?xml version="1.0" encoding="UTF-8"?>
+<Datasets xmlns="http://rs.tdwg.org/UBIF/2006/"
+ xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://rs.tdwg.org/UBIF/2006/ http://rs.tdwg.org/UBIF/2006/Schema/1.1/SDD.xsd">
+ <TechnicalMetadata created="1970-01-01T09:34:00">
+ <Generator name="Xper2"
+ notes="This software is developed and distributed by LIS - Laboratoire Informatique et SystÈmatique (LIS) - UniversitÈ Pierre et Marie Curie - Paris VI - Copyright (c) 2004-2009" version="1.1"/>
+ </TechnicalMetadata>
+ <Dataset xml:lang="fr">
+ <Representation>
+ <Label>ant base</Label>
+ </Representation>
+ <RevisionData>
+ <Creators>
+ <Agent ref="a0" role="aut"/>
+ </Creators>
+ <DateCreated>2012-06-06T09:34:58</DateCreated>
+ <DateModified>2012-06-06T09:34:58</DateModified>
+ </RevisionData>
+ <TaxonNames>
+ <TaxonName id="t1">
+ <Representation>
+ <Label>Dolichoderinae</Label>
+ </Representation>
+ </TaxonName>
+ <TaxonName id="t2">
+ <Representation>
+ <Label>Formicinae</Label>
+ </Representation>
+ </TaxonName>
+ <TaxonName id="t3">
+ <Representation>
+ <Label>Ponerinae</Label>
+ </Representation>
+ </TaxonName>
+ <TaxonName id="t4">
+ <Representation>
+ <Label>Myrmicinae</Label>
+ </Representation>
+ </TaxonName>
+ <TaxonName id="t5">
+ <Representation>
+ <Label>Pseudomyrmecinae</Label>
+ </Representation>
+ </TaxonName>
+ <TaxonName id="t6">
+ <Representation>
+ <Label>Ecitoninae</Label>
+ </Representation>
+ </TaxonName>
+ <TaxonName id="t7">
+ <Representation>
+ <Label>Ectatomminae</Label>
+ </Representation>
+ </TaxonName>
+ <TaxonName id="t8">
+ <Representation>
+ <Label>Cerapachyinae</Label>
+ </Representation>
+ </TaxonName>
+ <TaxonName id="t9">
+ <Representation>
+ <Label>Genus Ectatom</Label>
+ </Representation>
+ </TaxonName>
+ </TaxonNames>
+ <TaxonHierarchies>
+ <TaxonHierarchy id="th1">
+ <Representation>
+ <Label>Default Entity Tree</Label>
+ </Representation>
+ <TaxonHierarchyType>UnspecifiedTaxonomy</TaxonHierarchyType>
+ <Nodes>
+ <Node id="tn1">
+ <TaxonName ref="t1"/>
+ </Node>
+ <Node id="tn2">
+ <TaxonName ref="t2"/>
+ </Node>
+ <Node id="tn3">
+ <Parent ref="tn2"/>
+ <TaxonName ref="t3"/>
+ </Node>
+ <Node id="tn4">
+ <TaxonName ref="t4"/>
+ </Node>
+ <Node id="tn5">
+ <Parent ref="tn4"/>
+ <TaxonName ref="t5"/>
+ </Node>
+ <Node id="tn6">
+ <TaxonName ref="t6"/>
+ </Node>
+ <Node id="tn7">
+ <Parent ref="tn6"/>
+ <TaxonName ref="t8"/>
+ </Node>
+ </Nodes>
+ </TaxonHierarchy>
+ </TaxonHierarchies>
+ <Characters>
+ <CategoricalCharacter id="c1">
+ <Representation>
+ <Label>Pétiole</Label>
+ <Detail>Le <b>pétiole</b> se situe entre le mésosoma et l'alitrunk.</Detail>
+ <MediaObject ref="m35"/>
+ <MediaObject ref="m36"/>
+ </Representation>
+ <States>
+ <StateDefinition id="s1">
+ <Representation>
+ <Label>un seul article réduit ou isolé</Label>
+ <MediaObject ref="m37"/>
+ </Representation>
+ </StateDefinition>
+ <StateDefinition id="s2">
+ <Representation>
+ <Label>deux articles réduits ou isolés</Label>
+ <Detail>Les deux articles correspondent au<b>pétiole</b> et au <b>post-pétiole</b>.<br>Soit les deux segments sont plus ou moins réduits, soit le deuxième article est plus large que le premier, soit le postpétiole est largement plus réduit.</Detail>
+ <MediaObject ref="m38"/>
+ </Representation>
+ </StateDefinition>
+ </States>
+ </CategoricalCharacter>
+ <CategoricalCharacter id="c2">
+ <Representation>
+ <Label>Aiguillon venimeux</Label>
+ <Detail>Quand il est vestigial et non fonctionnel, on le considère comme absent.</Detail>
+ <MediaObject ref="m39"/>
+ <MediaObject ref="m40"/>
+ </Representation>
+ <States>
+ <StateDefinition id="s3">
+ <Representation>
+ <Label>absent</Label>
+ <Detail>Apex du gastre <b>sans aiguillon</b>.</Detail>
+ <MediaObject ref="m41"/>
+ </Representation>
+ </StateDefinition>
+ <StateDefinition id="s4">
+ <Representation>
+ <Label>présent</Label>
+ <Detail>C'est l'<b>apex du gastre</b> qui porte l'aiguillon.<br>Il est considéré comme présent uniquement s'il <b>est fonctionnel</b>. Certains aiguillons sont dévaginables, d'autres sont visibles de façon permanente.</Detail>
+ <MediaObject ref="m42"/>
+ <MediaObject ref="m43"/>
+ </Representation>
+ </StateDefinition>
+ </States>
+ </CategoricalCharacter>
+ <CategoricalCharacter id="c3">
+ <Representation>
+ <Label>Acidopore</Label>
+ <Detail>L'<b>acidopore</b> est l'ouverture à la base du gastre par laquelle le venin est éjecté ou vaporisé</Detail>
+ <MediaObject ref="m44"/>
+ <MediaObject ref="m45"/>
+ </Representation>
+ <States>
+ <StateDefinition id="s5">
+ <Representation>
+ <Label>circulaire et entouré de soies</Label>
+ <Detail>Quand cette structure est présente, le venin est projeté sous forme de spray. L'<b>acidopore circulaire</b> est parfois visible à l'oeil nu chez les fourmis de grande taille.</Detail>
+ <MediaObject ref="m46"/>
+ </Representation>
+ </StateDefinition>
+ <StateDefinition id="s6">
+ <Representation>
+ <Label>sous forme de fente</Label>
+ <Detail>Contrairement à l'acidopore circulaire, la <b>fente</b> est rarement visible à l'oeil nu.</Detail>
+ <MediaObject ref="m47"/>
+ </Representation>
+ </StateDefinition>
+ <StateDefinition id="s7">
+ <Representation>
+ <Label>absent ou quasi invisible</Label>
+ </Representation>
+ </StateDefinition>
+ </States>
+ </CategoricalCharacter>
+ <CategoricalCharacter id="c4">
+ <Representation>
+ <Label>Pygidium</Label>
+ <Detail>Le <b>pygidium</b> correspond au tergite à l'apex du gastre.</Detail>
+ <MediaObject ref="m48"/>
+ <MediaObject ref="m49"/>
+ </Representation>
+ <States>
+ <StateDefinition id="s8">
+ <Representation>
+ <Label>non armé</Label>
+ <Detail><b>Pygidium lisse non armé</b> latéralement ou postérieurement.</Detail>
+ </Representation>
+ </StateDefinition>
+ <StateDefinition id="s9">
+ <Representation>
+ <Label>armé</Label>
+ <Detail><b>Pygidium armé </b> latéralement, postérieurement ou les deux par une rangée de courtes épines ou dents.</Detail>
+ <MediaObject ref="m50"/>
+ </Representation>
+ </StateDefinition>
+ </States>
+ </CategoricalCharacter>
+ <CategoricalCharacter id="c5">
+ <Representation>
+ <Label>Marge clypéale</Label>
+ <MediaObject ref="m51"/>
+ <MediaObject ref="m52"/>
+ </Representation>
+ <States>
+ <StateDefinition id="s10">
+ <Representation>
+ <Label>sans projection</Label>
+ <Detail>Il s'agit de la <b>marge clypéale antérolatérale</b>.</Detail>
+ <MediaObject ref="m53"/>
+ </Representation>
+ </StateDefinition>
+ <StateDefinition id="s11">
+ <Representation>
+ <Label>avec projection</Label>
+ <MediaObject ref="m54"/>
+ </Representation>
+ </StateDefinition>
+ </States>
+ </CategoricalCharacter>
+ <CategoricalCharacter id="c6">
+ <Representation>
+ <Label>Yeux</Label>
+ <Detail>Les <b>yeux</b> des insectes sont des yeux composés d'<b>ommatidies</b>. Attention à ne pas les confondre avec les <b>ocelles</b>, yeux simples souvent situés sur le dessu-de la tête, servant à détecter les variations de luminosité.</Detail>
+ <MediaObject ref="m55"/>
+ <MediaObject ref="m56"/>
+ </Representation>
+ <States>
+ <StateDefinition id="s12">
+ <Representation>
+ <Label>absents ou très réduits</Label>
+ <Detail>Yeux absents ou très réduits c'est à dire représentés seulement par une seule ou un petit nombre d'ommatidies.</Detail>
+ </Representation>
+ </StateDefinition>
+ <StateDefinition id="s13">
+ <Representation>
+ <Label>présents et bien visibles</Label>
+ <Detail>Yeux présent et bien visibles composés d'un grand nombre d'ommatidies.</Detail>
+ <MediaObject ref="m57"/>
+ </Representation>
+ </StateDefinition>
+ </States>
+ </CategoricalCharacter>
+ <CategoricalCharacter id="c7">
+ <Representation>
+ <Label>Antennes</Label>
+ <MediaObject ref="m58"/>
+ <MediaObject ref="m59"/>
+ </Representation>
+ <States>
+ <StateDefinition id="s14">
+ <Representation>
+ <Label>de 8 à 10 segments</Label>
+ </Representation>
+ </StateDefinition>
+ <StateDefinition id="s15">
+ <Representation>
+ <Label>de 12 segments</Label>
+ </Representation>
+ </StateDefinition>
+ <StateDefinition id="s16">
+ <Representation>
+ <Label>moins de 8 segments</Label>
+ </Representation>
+ </StateDefinition>
+ <StateDefinition id="s17">
+ <Representation>
+ <Label>10 ou 11 segments</Label>
+ </Representation>
+ </StateDefinition>
+ </States>
+ </CategoricalCharacter>
+ <CategoricalCharacter id="c8">
+ <Representation>
+ <Label>Répartition mondiale</Label>
+ </Representation>
+ <States>
+ <StateDefinition id="s18">
+ <Representation>
+ <Label>monde entier</Label>
+ </Representation>
+ </StateDefinition>
+ <StateDefinition id="s19">
+ <Representation>
+ <Label>régions tempérées</Label>
+ </Representation>
+ </StateDefinition>
+ <StateDefinition id="s20">
+ <Representation>
+ <Label>tropiques</Label>
+ <Detail>Il s'agit des tropiques (voire subtropiques) du monden entier.</Detail>
+ </Representation>
+ </StateDefinition>
+ <StateDefinition id="s21">
+ <Representation>
+ <Label>néotropiques</Label>
+ <Detail>Il s'agit des zones tropicales américaines.</Detail>
+ </Representation>
+ </StateDefinition>
+ </States>
+ </CategoricalCharacter>
+ <CategoricalCharacter id="c9">
+ <Representation>
+ <Label>Lobes frontaux</Label>
+ <MediaObject ref="m60"/>
+ <MediaObject ref="m61"/>
+ </Representation>
+ <States>
+ <StateDefinition id="s22">
+ <Representation>
+ <Label>absents ou très réduits et verticaux</Label>
+ <MediaObject ref="m62"/>
+ </Representation>
+ </StateDefinition>
+ <StateDefinition id="s23">
+ <Representation>
+ <Label>présents et horizontaux</Label>
+ <MediaObject ref="m63"/>
+ </Representation>
+ </StateDefinition>
+ </States>
+ </CategoricalCharacter>
+ <CategoricalCharacter id="c10">
+ <Representation>
+ <Label>Bases antennaires</Label>
+ <MediaObject ref="m64"/>
+ <MediaObject ref="m65"/>
+ </Representation>
+ <States>
+ <StateDefinition id="s24">
+ <Representation>
+ <Label>partiellement ou complètement camouflées</Label>
+ <Detail>En vue de face, les <b>bases antennaires</b> sont partiellement ou complètement recouvertes par les <b> lobes frontaux</b> (jamais complètement exposées).</Detail>
+ <MediaObject ref="m66"/>
+ </Representation>
+ </StateDefinition>
+ <StateDefinition id="s25">
+ <Representation>
+ <Label>totalement exposées</Label>
+ <Detail>En vue de face, les <b>bases antennaires</b> sont complètement exposées et non recouvertes par les lobes frontaux.</Detail>
+ <MediaObject ref="m67"/>
+ </Representation>
+ </StateDefinition>
+ </States>
+ </CategoricalCharacter>
+ <CategoricalCharacter id="c11">
+ <Representation>
+ <Label>Suture promésonotale</Label>
+ <Detail>La <b>suture promésonotale</b> est la suture (ligne de ligne de fusion) entre le pronotum et le mesonotum, les deux premiers articles du thorax.</Detail>
+ <MediaObject ref="m68"/>
+ <MediaObject ref="m69"/>
+ <MediaObject ref="m70"/>
+ <MediaObject ref="m71"/>
+ </Representation>
+ <States>
+ <StateDefinition id="s26">
+ <Representation>
+ <Label>absente</Label>
+ <MediaObject ref="m72"/>
+ </Representation>
+ </StateDefinition>
+ <StateDefinition id="s27">
+ <Representation>
+ <Label>vestigiale</Label>
+ </Representation>
+ </StateDefinition>
+ <StateDefinition id="s28">
+ <Representation>
+ <Label>présente</Label>
+ <MediaObject ref="m73"/>
+ </Representation>
+ </StateDefinition>
+ </States>
+ </CategoricalCharacter>
+ <CategoricalCharacter id="c12">
+ <Representation>
+ <Label>Ocelle(s)</Label>
+ <Detail>Les <b>ocelles</b> sont des yeux simples servant à détecter les variations de luminosité. Les ouvrières peuvent avoir un ou plusieurs ocelles.</Detail>
+ <MediaObject ref="m74"/>
+ <MediaObject ref="m75"/>
+ </Representation>
+ <States>
+ <StateDefinition id="s29">
+ <Representation>
+ <Label>absent(s)</Label>
+ </Representation>
+ </StateDefinition>
+ <StateDefinition id="s30">
+ <Representation>
+ <Label>présent(s)</Label>
+ </Representation>
+ </StateDefinition>
+ </States>
+ </CategoricalCharacter>
+ <CategoricalCharacter id="c13">
+ <Representation>
+ <Label>Palpes maxillaires</Label>
+ <MediaObject ref="m76"/>
+ </Representation>
+ <States>
+ <StateDefinition id="s31">
+ <Representation>
+ <Label>présents et bien visibles</Label>
+ </Representation>
+ </StateDefinition>
+ <StateDefinition id="s32">
+ <Representation>
+ <Label>absents ou très difficilement visibles</Label>
+ </Representation>
+ </StateDefinition>
+ </States>
+ </CategoricalCharacter>
+ </Characters>
+ <CharacterTrees>
+ <CharacterTree id="ct1">
+ <Representation>
+ <Label>Ordre et dÈpendance entre caractËres</Label>
+ </Representation>
+ <ShouldContainAllCharacters>true</ShouldContainAllCharacters>
+ <Nodes>
+ <CharNode>
+ <Character ref="c1"/>
+ </CharNode>
+ <CharNode>
+ <Character ref="c2"/>
+ </CharNode>
+ <CharNode>
+ <DependencyRules>
+ <InapplicableIf>
+ <State ref="s2"/>
+ </InapplicableIf>
+ </DependencyRules>
+ <Character ref="c3"/>
+ </CharNode>
+ <CharNode>
+ <Character ref="c4"/>
+ </CharNode>
+ <CharNode>
+ <DependencyRules>
+ <InapplicableIf>
+ <State ref="s3"/>
+ </InapplicableIf>
+ </DependencyRules>
+ <Character ref="c5"/>
+ </CharNode>
+ <CharNode>
+ <Character ref="c6"/>
+ </CharNode>
+ <CharNode>
+ <Character ref="c7"/>
+ </CharNode>
+ <CharNode>
+ <Character ref="c8"/>
+ </CharNode>
+ <CharNode>
+ <Character ref="c9"/>
+ </CharNode>
+ <CharNode>
+ <Character ref="c10"/>
+ </CharNode>
+ <CharNode>
+ <Character ref="c11"/>
+ </CharNode>
+ <CharNode>
+ <Character ref="c12"/>
+ </CharNode>
+ <CharNode>
+ <Character ref="c13"/>
+ </CharNode>
+ </Nodes>
+ </CharacterTree>
+ </CharacterTrees>
+ <CodedDescriptions>
+ <CodedDescription id="D1">
+ <Representation>
+ <Label>Dolichoderinae</Label>
+ <MediaObject ref="m1"/>
+ <MediaObject ref="m2"/>
+ <MediaObject ref="m3"/>
+ </Representation>
+ <Scope>
+ <TaxonName ref="t1"/>
+ </Scope>
+ <SummaryData>
+ <Categorical ref="c1">
+ <State ref="s1"/>
+ </Categorical>
+ <Categorical ref="c2">
+ <Note>Leur aiguillon venimeux est vestigial et non fonctionnel.</Note>
+ <State ref="s3"/>
+ </Categorical>
+ <Categorical ref="c3">
+ <State ref="s6"/>
+ </Categorical>
+ <Categorical ref="c4">
+ <State ref="s8"/>
+ </Categorical>
+ <Categorical ref="c5"/>
+ <Categorical ref="c6">
+ <State ref="s13"/>
+ </Categorical>
+ <Categorical ref="c7">
+ <Note>Les ouvrières possèdent généralement 11 articles antennaires, rarement 10 ou 11.</Note>
+ <State ref="s14"/>
+ <State ref="s15"/>
+ </Categorical>
+ <Categorical ref="c8">
+ <State ref="s18"/>
+ </Categorical>
+ <Categorical ref="c9">
+ <Status code="DataUnavailable"/>
+ </Categorical>
+ <Categorical ref="c10">
+ <Note>Elles sont partiellement ou totalement cachées par la carèbe frontale, marge du lbe frontal.</Note>
+ <State ref="s24"/>
+ </Categorical>
+ <Categorical ref="c11">
+ <Note>Elle est présente et flexible.</Note>
+ <State ref="s28"/>
+ </Categorical>
+ <Categorical ref="c12">
+ <Note>Les ocelles sont pratiquement tout le temps absents.</Note>
+ <State ref="s29"/>
+ </Categorical>
+ <Categorical ref="c13">
+ <State ref="s31"/>
+ </Categorical>
+ </SummaryData>
+ </CodedDescription>
+ <CodedDescription id="D2">
+ <Representation>
+ <Label>Formicinae</Label>
+ <MediaObject ref="m4"/>
+ <MediaObject ref="m5"/>
+ <MediaObject ref="m6"/>
+ <MediaObject ref="m7"/>
+ <MediaObject ref="m8"/>
+ </Representation>
+ <Scope>
+ <TaxonName ref="t2"/>
+ </Scope>
+ <SummaryData>
+ <Categorical ref="c1">
+ <State ref="s1"/>
+ </Categorical>
+ <Categorical ref="c2">
+ <Note>Leur aiguillon est non fonctionnel.</Note>
+ <State ref="s3"/>
+ </Categorical>
+ <Categorical ref="c3">
+ <State ref="s5"/>
+ </Categorical>
+ <Categorical ref="c4">
+ <State ref="s8"/>
+ </Categorical>
+ <Categorical ref="c5"/>
+ <Categorical ref="c6">
+ <Note>Leurs yeux sont généralement bien développés, rarement réduits ou absents.</Note>
+ <State ref="s12"/>
+ <State ref="s13"/>
+ </Categorical>
+ <Categorical ref="c7">
+ <State ref="s14"/>
+ <State ref="s15"/>
+ <State ref="s17"/>
+ </Categorical>
+ <Categorical ref="c8">
+ <State ref="s18"/>
+ </Categorical>
+ <Categorical ref="c9">
+ <Status code="DataUnavailable"/>
+ </Categorical>
+ <Categorical ref="c10">
+ <State ref="s25"/>
+ </Categorical>
+ <Categorical ref="c11">
+ <State ref="s28"/>
+ </Categorical>
+ <Categorical ref="c12">
+ <Note>Les ocelles sont présents dans la grande majorité des genres.</Note>
+ <State ref="s30"/>
+ </Categorical>
+ <Categorical ref="c13">
+ <State ref="s31"/>
+ <State ref="s32"/>
+ </Categorical>
+ </SummaryData>
+ </CodedDescription>
+ <CodedDescription id="D3">
+ <Representation>
+ <Label>Ponerinae</Label>
+ <MediaObject ref="m9"/>
+ <MediaObject ref="m10"/>
+ <MediaObject ref="m11"/>
+ <MediaObject ref="m12"/>
+ <MediaObject ref="m13"/>
+ </Representation>
+ <Scope>
+ <TaxonName ref="t3"/>
+ </Scope>
+ <SummaryData>
+ <Categorical ref="c1">
+ <State ref="s1"/>
+ </Categorical>
+ <Categorical ref="c2">
+ <State ref="s4"/>
+ </Categorical>
+ <Categorical ref="c3">
+ <State ref="s7"/>
+ </Categorical>
+ <Categorical ref="c4">
+ <State ref="s8"/>
+ </Categorical>
+ <Categorical ref="c5">
+ <State ref="s10"/>
+ </Categorical>
+ <Categorical ref="c6">
+ <Note>Les Ponerinae possèdent des yeux bien développés dans la grande majorité des cas.</Note>
+ <State ref="s13"/>
+ </Categorical>
+ <Categorical ref="c7">
+ <Status code="DataUnavailable"/>
+ </Categorical>
+ <Categorical ref="c8">
+ <State ref="s19"/>
+ <State ref="s20"/>
+ </Categorical>
+ <Categorical ref="c9">
+ <State ref="s23"/>
+ </Categorical>
+ <Categorical ref="c10">
+ <State ref="s24"/>
+ </Categorical>
+ <Categorical ref="c11">
+ <Note>Si les yeux et les lobes frontaux sont absents, la suture promésonotale est toujours absente.</Note>
+ <State ref="s26"/>
+ <State ref="s28"/>
+ </Categorical>
+ <Categorical ref="c12">
+ <Note>En général les ouvrières de poneriane ne portent pas d'ocelles.</Note>
+ <State ref="s29"/>
+ </Categorical>
+ <Categorical ref="c13">
+ <State ref="s31"/>
+ <State ref="s32"/>
+ </Categorical>
+ </SummaryData>
+ </CodedDescription>
+ <CodedDescription id="D4">
+ <Representation>
+ <Label>Myrmicinae</Label>
+ <MediaObject ref="m14"/>
+ <MediaObject ref="m15"/>
+ <MediaObject ref="m16"/>
+ <MediaObject ref="m17"/>
+ <MediaObject ref="m18"/>
+ <MediaObject ref="m19"/>
+ <MediaObject ref="m20"/>
+ </Representation>
+ <Scope>
+ <TaxonName ref="t4"/>
+ </Scope>
+ <SummaryData>
+ <Categorical ref="c1">
+ <State ref="s2"/>
+ </Categorical>
+ <Categorical ref="c2">
+ <State ref="s4"/>
+ </Categorical>
+ <Categorical ref="c3"/>
+ <Categorical ref="c4">
+ <State ref="s8"/>
+ </Categorical>
+ <Categorical ref="c5">
+ <State ref="s10"/>
+ </Categorical>
+ <Categorical ref="c6">
+ <State ref="s13"/>
+ </Categorical>
+ <Categorical ref="c7">
+ <Note>Le nombre d'articles antennaires peut varier de 4 à 12 chez les Myrmicinae.</Note>
+ <State ref="s14"/>
+ <State ref="s15"/>
+ <State ref="s16"/>
+ </Categorical>
+ <Categorical ref="c8">
+ <State ref="s18"/>
+ </Categorical>
+ <Categorical ref="c9">
+ <State ref="s22"/>
+ <State ref="s23"/>
+ </Categorical>
+ <Categorical ref="c10">
+ <State ref="s24"/>
+ <State ref="s25"/>
+ </Categorical>
+ <Categorical ref="c11">
+ <Note>Elle est souvent complètement absente et rarement vestigiale. Quand c'est le cas, elle donne l'impression transversalement s'un arche en vue dorsale.</Note>
+ <State ref="s26"/>
+ <State ref="s27"/>
+ </Categorical>
+ <Categorical ref="c12">
+ <Note>Les ocelles sont la plupart du temps absents, très rarement présents.</Note>
+ <State ref="s29"/>
+ </Categorical>
+ <Categorical ref="c13">
+ <State ref="s31"/>
+ <State ref="s32"/>
+ </Categorical>
+ </SummaryData>
+ </CodedDescription>
+ <CodedDescription id="D5">
+ <Representation>
+ <Label>Pseudomyrmecinae</Label>
+ <MediaObject ref="m21"/>
+ <MediaObject ref="m22"/>
+ <MediaObject ref="m23"/>
+ <MediaObject ref="m24"/>
+ </Representation>
+ <Scope>
+ <TaxonName ref="t5"/>
+ </Scope>
+ <SummaryData>
+ <Categorical ref="c1">
+ <State ref="s2"/>
+ </Categorical>
+ <Categorical ref="c2">
+ <State ref="s4"/>
+ </Categorical>
+ <Categorical ref="c3"/>
+ <Categorical ref="c4">
+ <State ref="s8"/>
+ </Categorical>
+ <Categorical ref="c5">
+ <Note>La projestion clypéale concernée est postérieure c'est à dir vers les mandibules, et non vers le haut de la tête.</Note>
+ <State ref="s10"/>
+ </Categorical>
+ <Categorical ref="c6">
+ <State ref="s13"/>
+ </Categorical>
+ <Categorical ref="c7">
+ <State ref="s15"/>
+ </Categorical>
+ <Categorical ref="c8">
+ <State ref="s20"/>
+ </Categorical>
+ <Categorical ref="c9">
+ <State ref="s22"/>
+ <State ref="s23"/>
+ </Categorical>
+ <Categorical ref="c10">
+ <State ref="s24"/>
+ </Categorical>
+ <Categorical ref="c11">
+ <Note>Elle est très visible en vue dorsale.</Note>
+ <State ref="s28"/>
+ </Categorical>
+ <Categorical ref="c12">
+ <State ref="s30"/>
+ </Categorical>
+ <Categorical ref="c13">
+ <State ref="s32"/>
+ </Categorical>
+ </SummaryData>
+ </CodedDescription>
+ <CodedDescription id="D6">
+ <Representation>
+ <Label>Ecitoninae</Label>
+ <MediaObject ref="m25"/>
+ <MediaObject ref="m26"/>
+ <MediaObject ref="m27"/>
+ <MediaObject ref="m28"/>
+ </Representation>
+ <Scope>
+ <TaxonName ref="t6"/>
+ </Scope>
+ <SummaryData>
+ <Categorical ref="c1">
+ <State ref="s2"/>
+ </Categorical>
+ <Categorical ref="c2">
+ <State ref="s4"/>
+ </Categorical>
+ <Categorical ref="c3"/>
+ <Categorical ref="c4">
+ <State ref="s8"/>
+ </Categorical>
+ <Categorical ref="c5">
+ <State ref="s10"/>
+ </Categorical>
+ <Categorical ref="c6">
+ <Note>Leurs yeux sont réduits à une seule ommatidies ou absents.</Note>
+ <State ref="s12"/>
+ </Categorical>
+ <Categorical ref="c7">
+ <State ref="s15"/>
+ </Categorical>
+ <Categorical ref="c8">
+ <State ref="s19"/>
+ <State ref="s21"/>
+ </Categorical>
+ <Categorical ref="c9">
+ <State ref="s22"/>
+ </Categorical>
+ <Categorical ref="c10">
+ <State ref="s25"/>
+ </Categorical>
+ <Categorical ref="c11">
+ <Note>Cette suture n'est jamais marqué et elle est flexible.</Note>
+ <State ref="s26"/>
+ <State ref="s27"/>
+ </Categorical>
+ <Categorical ref="c12">
+ <State ref="s30"/>
+ </Categorical>
+ <Categorical ref="c13">
+ <State ref="s32"/>
+ </Categorical>
+ </SummaryData>
+ </CodedDescription>
+ <CodedDescription id="D7">
+ <Representation>
+ <Label>Ectatomminae</Label>
+ <MediaObject ref="m29"/>
+ <MediaObject ref="m30"/>
+ </Representation>
+ <Scope>
+ <TaxonName ref="t7"/>
+ </Scope>
+ <SummaryData>
+ <Categorical ref="c1">
+ <State ref="s1"/>
+ </Categorical>
+ <Categorical ref="c2">
+ <State ref="s3"/>
+ </Categorical>
+ <Categorical ref="c3">
+ <State ref="s7"/>
+ </Categorical>
+ <Categorical ref="c4">
+ <State ref="s8"/>
+ </Categorical>
+ <Categorical ref="c5"/>
+ <Categorical ref="c6">
+ <State ref="s13"/>
+ </Categorical>
+ <Categorical ref="c7">
+ <Status code="DataUnavailable"/>
+ </Categorical>
+ <Categorical ref="c8">
+ <State ref="s18"/>
+ </Categorical>
+ <Categorical ref="c9">
+ <State ref="s22"/>
+ </Categorical>
+ <Categorical ref="c10">
+ <State ref="s24"/>
+ </Categorical>
+ <Categorical ref="c11">
+ <Status code="DataUnavailable"/>
+ </Categorical>
+ <Categorical ref="c12">
+ <State ref="s29"/>
+ </Categorical>
+ <Categorical ref="c13">
+ <State ref="s32"/>
+ </Categorical>
+ </SummaryData>
+ </CodedDescription>
+ <CodedDescription id="D8">
+ <Representation>
+ <Label>Cerapachyinae</Label>
+ <MediaObject ref="m31"/>
+ <MediaObject ref="m32"/>
+ <MediaObject ref="m33"/>
+ <MediaObject ref="m34"/>
+ </Representation>
+ <Scope>
+ <TaxonName ref="t8"/>
+ </Scope>
+ <SummaryData>
+ <Categorical ref="c1">
+ <State ref="s1"/>
+ </Categorical>
+ <Categorical ref="c2">
+ <Note>Aiguillon bien dévellopé et fonctionnel.</Note>
+ <State ref="s4"/>
+ </Categorical>
+ <Categorical ref="c3">
+ <Status code="DataUnavailable"/>
+ </Categorical>
+ <Categorical ref="c4">
+ <Note>Il existe un rangée apicale ou marginale de courtes dents ou épines.</Note>
+ <State ref="s9"/>
+ </Categorical>
+ <Categorical ref="c5">
+ <State ref="s11"/>
+ </Categorical>
+ <Categorical ref="c6">
+ <Note>Les yeux sont généralement présents, très rarement réduits ou absents.</Note>
+ <State ref="s12"/>
+ </Categorical>
+ <Categorical ref="c7">
+ <State ref="s15"/>
+ <State ref="s17"/>
+ </Categorical>
+ <Categorical ref="c8">
+ <State ref="s20"/>
+ </Categorical>
+ <Categorical ref="c9">
+ <Status code="DataUnavailable"/>
+ </Categorical>
+ <Categorical ref="c10">
+ <State ref="s25"/>
+ </Categorical>
+ <Categorical ref="c11">
+ <Note>La plupart du temps, elle est complètement absente. Elle n'est que très rarement visible.</Note>
+ <State ref="s26"/>
+ <State ref="s28"/>
+ </Categorical>
+ <Categorical ref="c12">
+ <State ref="s30"/>
+ </Categorical>
+ <Categorical ref="c13">
+ <Status code="DataUnavailable"/>
+ </Categorical>
+ </SummaryData>
+ </CodedDescription>
+ <CodedDescription id="D9">
+ <Representation>
+ <Label>Genus Ectatom</Label>
+ </Representation>
+ <Scope>
+ <TaxonName ref="t9"/>
+ </Scope>
+ <SummaryData>
+ <Categorical ref="c1"/>
+ <Categorical ref="c2"/>
+ <Categorical ref="c3"/>
+ <Categorical ref="c4"/>
+ <Categorical ref="c5"/>
+ <Categorical ref="c6"/>
+ <Categorical ref="c7"/>
+ <Categorical ref="c8"/>
+ <Categorical ref="c9"/>
+ <Categorical ref="c10"/>
+ <Categorical ref="c11"/>
+ <Categorical ref="c12"/>
+ <Categorical ref="c13"/>
+ </SummaryData>
+ </CodedDescription>
+ </CodedDescriptions>
+ <Agents>
+ <Agent id="a0">
+ <Representation>
+ <Label>Unknown</Label>
+ </Representation>
+ </Agent>
+ </Agents>
+ <MediaObjects>
+ <MediaObject id="m1">
+ <Representation>
+ <Label>Dolichoderinae - m1</Label>
+ <Detail role="Caption">Dolichoderinae</Detail>
+ </Representation>
+ <Type>Image</Type>
+ <Source href="http://cybertaxonomy.eu/sites/wp5.e-taxonomy.eu/files/cybergate.PNG"/>
+ </MediaObject>
+ <MediaObject id="m2">
+ <Representation>
+ <Label>Dolichoderinae - m2</Label>
+ <Detail role="Caption">Dolichoderinae</Detail>
+ </Representation>
+ <Type>Image</Type>
+ <Source href="http://cybertaxonomy.eu/sites/wp5.e-taxonomy.eu/files/cybergate.PNG"/>
+ </MediaObject>
+ </MediaObjects>
+ </Dataset>
+</Datasets>
--- /dev/null
+<?xml version="1.0" encoding="UTF-8"?>
+<DataSet xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://www.tdwg.org/schemas/tcs/1.01 http://tdwg.napier.ac.uk/TCS_1.01/v101.xsd" xmlns="http://www.tdwg.org/schemas/tcs/1.01">
+ <!-- This is an instance document that tests as many different
+ applications of the schema as possible within a single document.
+ It is not meant to a 'realistic' example of a real data set
+ but a illustration of all the different types of data that can
+ be passed. -->
+ <MetaData>
+ <!-- to be completed -->
+ <Simple/>
+ </MetaData>
+ <Specimens>
+ <Specimen id="2">
+ <Simple/>
+ <Institution identifier=""/>
+ <Collection identifier="LE"/>
+ <SpecimenItem identifier=""/>
+ </Specimen>
+ </Specimens>
+ <Publications>
+ <Publication id="1">
+ <Simple>Fl. SSR</Simple>
+ </Publication>
+ <Publication id="2">
+ <Simple>Copeland, H.F. (1943). A study, anatomical and taxonomic, of the
+ genera of Rhododendroideae. Am. Midl.Nat. 30:533-625</Simple>
+ </Publication>
+ <Publication id="3">
+ <Simple>Wilson, E.H. & Rehder, A. (1921). A monograph of the azaleas.
+ Publication of the Arnold Arboretum No. 9 Harvard University, Cambridge
+ MA.</Simple>
+ </Publication>
+ <Publication id="4">
+ <Simple>Judd, W.S. & Kron, K.A. (1995) A Revision of Rhododendron VI
+ Edinb. J. Bot. 52(1): 1-54</Simple>
+ </Publication>
+ <Publication id="5">
+ <Simple>Maximoxicz, C.J. (1870) Rhododendron schlippenbachii. Mem. Acad. Sci.
+ St Petersbourg. ser.3 15.</Simple>
+ </Publication>
+ </Publications>
+ <TaxonNames>
+ <TaxonName id="0" nomenclaturalCode="Botanical">
+ <Simple>Rhododendron</Simple>
+ </TaxonName>
+ <TaxonName nomenclaturalCode="Botanical" id="1">
+ <Simple>Rhododendron subgenus Pentanthera (G. Don) Poyarkova</Simple>
+ <CanonicalName>
+ <Simple>Rhododedron subgenus Pentanthera</Simple>
+ <Genus>Rhododendron</Genus>
+ <InfragenericEpithet>Pentanthera</InfragenericEpithet>
+ </CanonicalName>
+ <CanonicalAuthorship>
+ <Simple>(G.Don) Poyarkova</Simple>
+ <BasionymAuthorship>
+ <Simple>G. Don</Simple>
+ <Authors>
+ <AgentName>G. Don</AgentName>
+ </Authors>
+ </BasionymAuthorship>
+ <CombinationAuthorship>
+ <Simple>Poyarkova</Simple>
+ <Authors>
+ <AgentName>Poyarkova</AgentName>
+ </Authors>
+ </CombinationAuthorship>
+ </CanonicalAuthorship>
+ <PublishedIn ref="1">Fl. SSR Vol 18 (1952)</PublishedIn>
+ <MicroReference>Page 57</MicroReference>
+ <Typification>
+ <Simple>Rhododendron flavum G.Don</Simple>
+ <!--
+ N.B. This could be linked to a full name entry if
+ required but no details are in the current monograph so
+ it isn't
+ -->
+ <TypeName/>
+ </Typification>
+ </TaxonName>
+ <TaxonName id="2" nomenclaturalCode="Botanical">
+ <Simple>Rhododendron sect. Sciadorhodion Rehder & Wilson</Simple>
+ <CanonicalName>
+ <Simple>Rhododendron sect. Sciadorhodion</Simple>
+ <Genus>Rhododendron</Genus>
+ <InfragenericEpithet>Sciadorhodion</InfragenericEpithet>
+ </CanonicalName>
+ <CanonicalAuthorship>
+ <Simple>Rehder & Wilson</Simple>
+ <BasionymAuthorship>
+ <Simple>Rehder & Wilson</Simple>
+ </BasionymAuthorship>
+ </CanonicalAuthorship>
+ <PublishedIn linkType="local" ref="3">Wislon & Rehder Monogr. Azaleas 79 (1921)</PublishedIn>
+ <MicroReference>Page 79</MicroReference>
+ <Typification>
+ <Simple/>
+ <TypeName>
+ <NameReference linkType="local" ref="3">Rhododendron quinquefolium Bisset
+ & Moore</NameReference>
+ <LectotypePublication ref="2">Copeland, H.F.(1943)</LectotypePublication>
+ </TypeName>
+ </Typification>
+ <Basionym>
+ <RelatedName ref="4">Azalea subgen. Sciadorhodion (Rhehder & Wilson)
+ Copeland</RelatedName>
+ </Basionym>
+ </TaxonName>
+ <TaxonName id="3" nomenclaturalCode="Botanical">
+ <Simple>Rhododendron quinquefolium Bisset & Moore</Simple>
+ </TaxonName>
+ <TaxonName id="4" nomenclaturalCode="Botanical">
+ <!-- for brevity this NameObject isn't fully expanded -->
+ <Simple>Azalea subgen. Sciadorhodion (Rhehder & Wilson) Copeland </Simple>
+ <Basionym>
+ <RelatedName ref="2">Rhododendron sect. Sciadorhodion Rehder &
+ Wilson</RelatedName>
+ </Basionym>
+ </TaxonName>
+ <TaxonName id="5" nomenclaturalCode="Botanical">
+ <Simple>Rhododendron schlippenbachii Maxim.</Simple>
+ <Rank code="sp">Species</Rank>
+ <CanonicalName>
+ <Simple>Rhododendron schlippenbachii</Simple>
+ <Genus>Rhododendron</Genus>
+ <SpecificEpithet>schlippenbachii</SpecificEpithet>
+ </CanonicalName>
+ <CanonicalAuthorship>
+ <Simple>Maxim.</Simple>
+ <BasionymAuthorship>
+ <Simple>Maxim.</Simple>
+ <Authors>
+ <AgentName>Maximoxicz, C.J.</AgentName>
+ </Authors>
+ </BasionymAuthorship>
+ </CanonicalAuthorship>
+ <PublishedIn ref="5">Bull. Acad. Sci. St Petersbourg, ser. 3 15 (1870)</PublishedIn>
+ <MicroReference>Page 226</MicroReference>
+ <Typification>
+ <Simple/>
+ <TypeVouchers>
+ <TypeVoucher typeOfType="lecto">
+ <VoucherReference linkType="local" ref="1"/>
+ <LectotypePublication ref="4"/>
+ <LectotypeMicroReference>Page 15</LectotypeMicroReference>
+ </TypeVoucher>
+ <TypeVoucher typeOfType="isolecto">
+ <VoucherReference linkType="local" ref="2"/>
+ <LectotypePublication ref="4"/>
+ <LectotypeMicroReference>Page 15</LectotypeMicroReference>
+ </TypeVoucher>
+ </TypeVouchers>
+ </Typification>
+ </TaxonName>
+ <TaxonName id="6" nomenclaturalCode="Botanical">
+ <Simple>Azalea schlippenbachii (Maxim.) Kuntze</Simple>
+ <CanonicalName>
+ <Simple>Azalea schlippenbachii</Simple>
+ <Genus>Azalea</Genus>
+ <SpecificEpithet>schlippenbachii</SpecificEpithet>
+ </CanonicalName>
+ <CanonicalAuthorship>
+ <Simple>(Maxim.) Kuntze</Simple>
+ <BasionymAuthorship>
+ <Simple>Maxim.</Simple>
+ </BasionymAuthorship>
+ <CombinationAuthorship>
+ <Simple>Kuntze</Simple>
+ </CombinationAuthorship>
+ </CanonicalAuthorship>
+ <PublishedIn>Revis. Gen.Pl. 2:387 (1891)</PublishedIn>
+ <Typification>
+ <Simple/>
+ <TypeVouchers>
+ <TypeVoucher typeOfType="lecto">
+ <VoucherReference ref="2">[Russia] Manchuria, shores of Possiet Bay, [SW of
+ Vladivostok], 1860, C. Maximowicz LE</VoucherReference>
+ <LectotypePublication ref="4"/>
+ <LectotypeMicroReference>Page 15</LectotypeMicroReference>
+ </TypeVoucher>
+ </TypeVouchers>
+ </Typification>
+ </TaxonName>
+ <TaxonName id="7" nomenclaturalCode="Botanical">
+ <Simple>Rhododendron pentaphyllum Maxim.</Simple>
+ <CanonicalName>
+ <Simple>Rhododendron pentaphyllum</Simple>
+ <Genus>Rhododendron</Genus>
+ <SpecificEpithet>pentaphyllum</SpecificEpithet>
+ </CanonicalName>
+ <CanonicalAuthorship>
+ <Simple>Maxim.</Simple>
+ </CanonicalAuthorship>
+ <PublishedIn>Bull. Acad. Sci. St Petersbourg, ser. 3, 31:65 (1887)</PublishedIn>
+ <Typification>
+ <Simple/>
+ <TypeVouchers>
+ <TypeVoucher typeOfType="holo">
+ <VoucherReference>Japan, Kyushiu, prov. Osumi, summit, Mt Taka-kuma, Tashiro
+ (LE)</VoucherReference>
+ </TypeVoucher>
+ </TypeVouchers>
+
+ </Typification>
+ </TaxonName>
+ <TaxonName id="8" nomenclaturalCode="Botanical">
+ <Simple>Azalea pentaphylla (Maxim.) Copeland</Simple>
+ <CanonicalName>
+ <Simple>Azalea pentaphylla</Simple>
+ <Genus>Azalea</Genus>
+ <SpecificEpithet>pentaphylla</SpecificEpithet>
+ </CanonicalName>
+ <CanonicalAuthorship>
+ <Simple>(Maxim.) Copeland</Simple>
+ <BasionymAuthorship>
+ <Simple>Maxim.</Simple>
+ </BasionymAuthorship>
+ <CombinationAuthorship>
+ <Simple>Copeland</Simple>
+ </CombinationAuthorship>
+ </CanonicalAuthorship>
+ <PublishedIn>Am.Midl.Nat. 30:595 (1943)</PublishedIn>
+ <Typification>
+ <Simple/>
+ <TypeVouchers>
+ <TypeVoucher typeOfType="holo">
+ <VoucherReference>Japan, Kyushiu, prov. Osumi, summit, Mt Taka-kuma, Tashiro
+ (LE)</VoucherReference>
+ </TypeVoucher>
+ </TypeVouchers>
+ </Typification>
+ </TaxonName>
+ <TaxonName id="9" nomenclaturalCode="Botanical">
+ <Simple>Rhododendron pentaphyllum var. nikoense Komatsu</Simple>
+ <Rank code="var">variety</Rank>
+ <CanonicalName>
+ <Simple>Rhododendron pentaphyllum var. nikoense</Simple>
+ <Genus ref="0">Rhododendron</Genus>
+ <SpecificEpithet>pentaphyllum</SpecificEpithet>
+ <InfraspecificEpithet>nikoense</InfraspecificEpithet>
+ </CanonicalName>
+ <CanonicalAuthorship>
+ <Simple>Konatsu</Simple>
+ </CanonicalAuthorship>
+ <PublishedIn>Icon. Pl. Koisikav. 3: 45, t 168 (1916)</PublishedIn>
+ </TaxonName>
+ <TaxonName id="10" nomenclaturalCode="Botanical">
+ <Simple>Rhododendron nikoense (Komatsu) Nakai</Simple>
+ <Rank code="sp">Species</Rank>
+ <CanonicalName>
+ <Simple>Rhododendron nikoense</Simple>
+ <Genus ref="0">Rhododendron</Genus>
+ <SpecificEpithet>nikoense</SpecificEpithet>
+ </CanonicalName>
+ <CanonicalAuthorship>
+ <Simple>(Komatsu) Nakai</Simple>
+ <BasionymAuthorship>
+ <Simple>Komatsu</Simple>
+ </BasionymAuthorship>
+ <CombinationAuthorship>
+ <Simple>Nakai</Simple>
+ </CombinationAuthorship>
+ </CanonicalAuthorship>
+ <PublishedIn>Nakai & Koidz. Trees and Shrubs Japan 1: 68 (1922)</PublishedIn>
+ <Basionym>
+ <RelatedName ref="9">Rhododendron pentaphyllum var. nikoense</RelatedName>
+ </Basionym>
+ </TaxonName>
+ <TaxonName id="11" nomenclaturalCode="Botanical">
+ <Simple>Rhododendron quinquefolium Bisset & S. Moore var. roseum Rehder</Simple>
+ <Rank code="var">variety</Rank>
+ <CanonicalName>
+ <Simple>Rhododendron quinquefolium</Simple>
+ <Genus ref="0">Rhododendron</Genus>
+ <SpecificEpithet>quinquefolium</SpecificEpithet>
+ <InfraspecificEpithet>roseum</InfraspecificEpithet>
+ </CanonicalName>
+ <CanonicalAuthorship>
+ <Simple>Rehder</Simple>
+ </CanonicalAuthorship>
+ <PublishedIn>Bailey, Stand. Cycl. Hort. 5: 2947 (1916)</PublishedIn>
+ </TaxonName>
+ <TaxonName id="12" nomenclaturalCode="Botanical">
+ <Simple>Rhododendron pentaphyllum Maxim. var. shikokianum T. Yamazaki</Simple>
+ <Rank code="sp">species</Rank>
+ <CanonicalName>
+ <Simple>Rhododendron pentaphyllum var. shikokianum</Simple>
+ <Genus ref="0">Rhododendron</Genus>
+ <SpecificEpithet>pentaphyllum</SpecificEpithet>
+ <InfraspecificEpithet>shikokianum</InfraspecificEpithet>
+ </CanonicalName>
+ <CanonicalAuthorship>
+ <Simple>T. Yamazaki</Simple>
+ </CanonicalAuthorship>
+ <PublishedIn>Jap. Bot. 63: 312 (1988)</PublishedIn>
+ </TaxonName>
+ </TaxonNames>
+ <TaxonConcepts>
+ <TaxonConcept id="1">
+ <Name scientific="true" linkType="local" ref="2">Rhododendron sect. Sciadorhodion Rehder
+ & Wilson</Name>
+ <Rank code="sect">Section</Rank>
+ <AccordingTo>
+ <Simple>Judd & Kron (1995)</Simple>
+ <AccordingToDetailed>
+ <PublishedIn linkType="local" ref="4">Judd & Kron (1995) A Revision of
+ Rhododendron VI </PublishedIn>
+ <MicroReference>Page 13-14</MicroReference>
+ </AccordingToDetailed>
+ </AccordingTo>
+ <TaxonRelationships>
+ <TaxonRelationship type="is parent taxon of">
+ <ToTaxonConcept linkType="local" ref="2"/>
+ </TaxonRelationship>
+ </TaxonRelationships>
+ </TaxonConcept>
+ <TaxonConcept id="2">
+ <Name scientific="true" linkType="local" ref="5">Rhododendron schlippenbachii Maxim.</Name>
+ <AccordingTo>
+ <Simple>Judd & Kron (1995)</Simple>
+ <AccordingToDetailed>
+ <PublishedIn linkType="local" ref="4"/>
+ <MicroReference>Page 15</MicroReference>
+ </AccordingToDetailed>
+ </AccordingTo>
+ <TaxonRelationships>
+ <TaxonRelationship type="is child taxon of">
+ <ToTaxonConcept ref="1">Rhododendron sect. Sciadorhodion Rehder &
+ Wilson</ToTaxonConcept>
+ </TaxonRelationship>
+ </TaxonRelationships>
+ </TaxonConcept>
+ <TaxonConcept id="3">
+ <Name scientific="true" ref="6">Azalea schlippenbachii (Maxim.) Kuntze</Name>
+ <AccordingTo>
+ <Simple>Kuntze (1891)</Simple>
+ </AccordingTo>
+ <TaxonRelationships>
+ <TaxonRelationship type="is congruent to">
+ <ToTaxonConcept ref="2"/>
+ </TaxonRelationship>
+ </TaxonRelationships>
+ </TaxonConcept>
+ <TaxonConcept id="4">
+ <Name scientific="true" ref="7">Rhododendron pentaphyllum Maxim.</Name>
+ <AccordingTo>
+ <Simple>Judd & Kron (1995)</Simple>
+ </AccordingTo>
+ <TaxonRelationships>
+ <!-- relationships linking to taxonconcept without any descriptive string -->
+ <TaxonRelationship type="has synonym">
+ <ToTaxonConcept ref="6"/>
+ </TaxonRelationship>
+ <TaxonRelationship type="has synonym">
+ <ToTaxonConcept ref="7"/>
+ </TaxonRelationship>
+ <!-- relationship with linking reference to another taxon concept and string description of concept -->
+ <TaxonRelationship type="has synonym">
+ <ToTaxonConcept ref="8">Rhododendron pentaphyllum var. nikoense
+ Komatsu</ToTaxonConcept>
+ </TaxonRelationship>
+ <!-- relationships without linking -->
+ <TaxonRelationship type="has synonym">
+ <ToTaxonConcept>Rhododendron pentaphyllum Maxim. var. shikokianum T.
+ Yamazaki</ToTaxonConcept>
+ </TaxonRelationship>
+ <TaxonRelationship type="has synonym">
+ <ToTaxonConcept>Rhododendron quinquefolium Bisset & S. Moore var. roseum
+ Rehder</ToTaxonConcept>
+ </TaxonRelationship>
+ </TaxonRelationships>
+ </TaxonConcept>
+ <TaxonConcept id="6">
+ <Name scientific="true">Rhododendron nikoense (Komatsu) Nakai</Name>
+ </TaxonConcept>
+ <TaxonConcept id="7">
+ <Name scientific="true" ref="10">Rhododendron nikoense (Komatsu) Nakai</Name>
+ </TaxonConcept>
+ <TaxonConcept id="8">
+ <Name scientific="true" ref="9">Rhododendron pentaphyllum var. nikoense Komatsu</Name>
+ </TaxonConcept>
+ </TaxonConcepts>
+</DataSet>
--- /dev/null
+<?xml version="1.0" encoding="UTF-8"?>
+<!DOCTYPE log4j:configuration SYSTEM "log4j.dtd">
+<log4j:configuration xmlns:log4j="http://jakarta.apache.org/log4j/" debug="false">
+ <appender name="CONSOLE" class="org.apache.log4j.ConsoleAppender">
+ <param name="Target" value="System.out"/>
+ <layout class="org.apache.log4j.PatternLayout">
+ <param name="ConversionPattern" value="%d %p [%c] - %m%n"/>
+ </layout>
+ <filter class="org.apache.log4j.filter.ExpressionFilter">
+ <param name="expression" value="msg like '.*has a maxElementsInMemory of 0. This might lead to performance degradation or OutOfMemoryError at Terracotta client.*'" />
+ <param name="acceptOnMatch" value="false"/>
+ </filter>
+ </appender>
+ <root>
+ <priority value ="WARN" />
+ <appender-ref ref="CONSOLE"/>
+ </root>
+ <logger name="org.hibernate.proxy.AbstractLazyInitializer">
+ <level value="info"/>
+ </logger>
+ <logger name="org.hibernate.collection.internal.AbstractPersistentCollection">
+ <level value="info"/>
+ </logger>
+</log4j:configuration>
\ No newline at end of file
--- /dev/null
+httpPort=9090
+stopPort=9191
+stopKey=jetty-cdm-server
+user=admin
+password=00000
--- /dev/null
+#
+# NOTE: this is the unitils.properties file for the cdmlib-persistence module
+# a separate unitils.properties exists for cdmlib-io and for cdmlib-services
+#
+#
+# the list of all properties is found in
+# http://unitils.org/unitils-default.properties
+#
+
+### Unitils Modules ###
+# List of modules that is loaded. Overloading this list is normally not useful, unless you want to add a custom
+# module. Disabling a module can be performed by setting unitils.module.<modulename>.enabled to false.
+# If a module's specific dependencies are not found (e.g. hibernate is not in you classpath), this module is not loaded,
+# even if it is in this list and the enabled property is set to true. It's therefore not strictly necessary to disable
+# any of these modules.
+#DEFAULT: unitils.modules=database,dbunit,hibernate,mock,easymock,inject,spring,jpa
+unitils.module.easymock.enabled=false
+unitils.module.mock.enabled=false
+
+
+### Database ###
+#
+# Name or path of the user specific properties file. This file should contain the necessary parameters to connect to the
+# developer's own unit test schema. It is recommended to override the name of this file in the project specific properties
+# file, to include the name of the project. The system will try to find this file in the classpath, the user home folder
+# (recommended) or the local filesystem.
+#
+unitils.configuration.localFileName=unitils-cdmlib-local.properties
+
+# H2 #
+#
+database.driverClassName=org.h2.Driver
+#database.url=jdbc:h2:file:./src/main/resources/h2/cdmTest;AUTO_SERVER=TRUE
+database.url=jdbc:h2:file:./target/classes/h2/cdmTest;AUTO_SERVER=TRUE
+database.dialect=h2
+database.userName=sa
+database.password=
+database.schemaNames=PUBLIC
+org.dbunit.dataset.datatype.IDataTypeFactory.implClassName.h2=org.dbunit.ext.h2.H2DataTypeFactory
+org.unitils.core.dbsupport.DbSupport.implClassName.h2=eu.etaxonomy.taxeditor.util.H2DbSupport
+database.storedIndentifierCase.h2=auto
+database.identifierQuoteString.h2=auto
+
+
+#### Transaction mode ###
+#
+# If set to commit or rollback, each test is run in a transaction,
+# which is committed or rolled back after the test is finished.
+# Since we have many tests with incomplete data these tests would be
+# failing during commit so it is better use rollback as default
+# and set commit for individual test where necessary
+DatabaseModule.Transactional.value.default=rollback
+
+# org.unitils.database.transaction.impl.DefaultUnitilsTransactionManager is used by default:
+#
+# Implements transactions for unit tests, by delegating to a spring PlatformTransactionManager.
+# The concrete implementation of PlatformTransactionManager that is used depends on the test class.
+# If a custom PlatformTransactionManager was configured in a spring ApplicationContext, this one is used.
+# If not, a suitable subclass of PlatformTransactionManager is created, depending on the configuration
+# of a test. E.g. if some ORM persistence unit was configured on the test, a PlatformTransactionManager
+# that can offer transactional behavior for such a persistence unit is used.
+# If no such configuration is found, a DataSourceTransactionManager is used.
+#
+# org.unitils.database.transaction.UnitilsTransactionManager.implClassName=org.unitils.database.transaction.impl.SpringTransactionManager
+
+### Hibernate ###
+#
+HibernateModule.configuration.implClassName=org.hibernate.cfg.Configuration
+
<?xml version="1.0" encoding="UTF-8"?>
-<?pde version="3.5"?><product application="eu.etaxonomy.taxeditor.application.application" id="eu.etaxonomy.taxeditor.application.eu_etaxonomy_taxeditor_product" includeLaunchers="true" name="EDIT Taxonomic Editor" uid="eu.etaxonomy.taxeditor.product" useFeatures="true" version="3.8.1">
+<?pde version="3.5"?><product application="eu.etaxonomy.taxeditor.application.application" id="eu.etaxonomy.taxeditor.application.eu_etaxonomy_taxeditor_product" includeLaunchers="true" name="EDIT Taxonomic Editor" uid="eu.etaxonomy.taxeditor.product" useFeatures="true" version="3.12.0.SNAPSHOT">
<aboutInfo>
<image path="/eu.etaxonomy.taxeditor.application/icons/256color_48x48.gif"/>
<text>
<?xml version="1.0" encoding="UTF-8"?>
<?pde version="3.5"?>
-<product name="EDIT Taxonomic Editor" uid="eu.etaxonomy.taxeditor.product.jre" id="eu.etaxonomy.taxeditor.application.eu_etaxonomy_taxeditor_product" application="eu.etaxonomy.taxeditor.application.application" version="3.8.0.qualifier" useFeatures="true" includeLaunchers="true">
+<product name="EDIT Taxonomic Editor" uid="eu.etaxonomy.taxeditor.product.jre" id="eu.etaxonomy.taxeditor.application.eu_etaxonomy_taxeditor_product" application="eu.etaxonomy.taxeditor.application.application" version="3.9.0.qualifier" useFeatures="true" includeLaunchers="true">
<aboutInfo>
<image path="/eu.etaxonomy.taxeditor.application/icons/256color_48x48.gif"/>
<parent>
<groupId>eu.etaxonomy</groupId>
<artifactId>taxeditor-parent</artifactId>
- <version>3.8.1</version>
+ <version>3.12.0-SNAPSHOT</version>
</parent>
<modelVersion>4.0.0</modelVersion>
<name>EDIT Taxonomic Editor Product</name>
<description>The EDIT Taxonomic Desktop Editor</description>
<url>http://wp5.e-taxonomy.eu/taxeditor</url>
- <properties>
+ <properties>
<product.id>eu.etaxonomy.taxeditor.product</product.id>
</properties>
- <build>
- <plugins>
- <plugin>
- <groupId>org.eclipse.tycho</groupId>
- <artifactId>tycho-p2-director-plugin</artifactId>
- <version>${tycho.version}</version>
- <executions>
- <execution>
- <id>materialize-products</id>
- <goals>
- <goal>materialize-products</goal>
- </goals>
- </execution>
- <execution>
- <id>archive-products</id>
- <goals>
- <goal>archive-products</goal>
- </goals>
- </execution>
- </executions>
- <configuration>
- <products>
- <product>
- <id>${product.id}</id>
- <rootFolder>EDIT Taxonomic Editor</rootFolder>
- </product>
- </products>
- </configuration>
- </plugin>
- </plugins>
- </build>
+
<profiles>
+ <profile>
+ <id>buildProducts</id>
+ <build>
+ <plugins>
+ <plugin>
+ <groupId>org.eclipse.tycho</groupId>
+ <artifactId>tycho-p2-director-plugin</artifactId>
+ <version>${tycho.version}</version>
+ <executions>
+ <execution>
+ <id>materialize-products</id>
+ <goals>
+ <goal>materialize-products</goal>
+ </goals>
+ </execution>
+ <execution>
+ <id>archive-products</id>
+ <goals>
+ <goal>archive-products</goal>
+ </goals>
+ </execution>
+ </executions>
+ <configuration>
+ <products>
+ <product>
+ <id>${product.id}</id>
+ <rootFolder>EDIT Taxonomic Editor</rootFolder>
+ </product>
+ </products>
+ </configuration>
+ </plugin>
+ </plugins>
+ </build>
+ </profile>
<profile>
<id>signJars</id>
<build>
</profile>
</profiles>
-</project>
+</project>
\ No newline at end of file
</prerequisites>
<groupId>eu.etaxonomy</groupId>
<artifactId>taxeditor-parent</artifactId>
- <version>3.8.1</version>
+ <version>3.12.0-SNAPSHOT</version>
<name>EDIT Taxonomic Editor</name>
<description>The Taxonomic Editor for EDIT's platform for
cybertaxonomy
<properties>
<java.codelevel>1.6</java.codelevel>
<project.build.sourceEncoding>UTF-8</project.build.sourceEncoding>
- <cdmlib.version>3.8.0</cdmlib.version>
+ <cdmlib.version>3.12.0-SNAPSHOT</cdmlib.version>
<!-- TODO can we use project.version ????? -->
<tycho.version>0.22.0</tycho.version>
- <taxeditor.version>3.8.0</taxeditor.version>
+ <taxeditor.version>3.12.0-SNAPSHOT</taxeditor.version>
<update.dir>snapshot</update.dir>
+ <unitils.version>3.4.2</unitils.version>
</properties>
<modules>
<module>eu.etaxonomy.taxeditor.cdmlib</module>
<role>Java Developer</role>
<role>Architect</role>
</roles>
- <url />
+ <url/>
</developer>
<developer>
<!-- your SVN account id please! -->
<role>Java Developer</role>
<role>Architect</role>
</roles>
- <url />
+ <url/>
</developer>
</developers>
<issueManagement>
BGBM BDI Projects / taxeditor.git / commitdiff