eu.etaxonomy.taxeditor.cdmlib/lib/activation-1.1.1.jar -text
eu.etaxonomy.taxeditor.cdmlib/lib/antlr-2.7.7.jar -text
eu.etaxonomy.taxeditor.cdmlib/lib/aopalliance-1.0.jar -text
-eu.etaxonomy.taxeditor.cdmlib/lib/aspectjrt-1.7.1-sources.jar -text
eu.etaxonomy.taxeditor.cdmlib/lib/aspectjrt-1.7.1.jar -text
-eu.etaxonomy.taxeditor.cdmlib/lib/aspectjweaver-1.7.1-sources.jar -text
eu.etaxonomy.taxeditor.cdmlib/lib/aspectjweaver-1.7.1.jar -text
eu.etaxonomy.taxeditor.cdmlib/lib/avro-1.6.3.jar -text
eu.etaxonomy.taxeditor.cdmlib/lib/batik-anim-1.7.jar -text
eu.etaxonomy.taxeditor.cdmlib/lib/stax-1.2.0.jar -text
eu.etaxonomy.taxeditor.cdmlib/lib/stax-api-1.0.1.jar -text
eu.etaxonomy.taxeditor.cdmlib/lib/swagger-annotations-1.3.5.jar -text
-eu.etaxonomy.taxeditor.cdmlib/lib/unitils-core-3.3.jar -text
-eu.etaxonomy.taxeditor.cdmlib/lib/unitils-database-3.3.jar -text
-eu.etaxonomy.taxeditor.cdmlib/lib/unitils-dbmaintainer-3.3.jar -text
-eu.etaxonomy.taxeditor.cdmlib/lib/unitils-dbunit-3.3.jar -text
-eu.etaxonomy.taxeditor.cdmlib/lib/unitils-easymock-3.3.jar -text
-eu.etaxonomy.taxeditor.cdmlib/lib/unitils-inject-3.3.jar -text
-eu.etaxonomy.taxeditor.cdmlib/lib/unitils-mock-3.3.jar -text
-eu.etaxonomy.taxeditor.cdmlib/lib/unitils-orm-3.3.jar -text
-eu.etaxonomy.taxeditor.cdmlib/lib/unitils-spring-3.3.jar -text
+eu.etaxonomy.taxeditor.cdmlib/lib/unitils-core-3.4.2.jar -text
+eu.etaxonomy.taxeditor.cdmlib/lib/unitils-database-3.4.2.jar -text
+eu.etaxonomy.taxeditor.cdmlib/lib/unitils-dbmaintainer-3.4.2.jar -text
+eu.etaxonomy.taxeditor.cdmlib/lib/unitils-dbunit-3.4.2.jar -text
+eu.etaxonomy.taxeditor.cdmlib/lib/unitils-spring-3.4.2.jar -text
eu.etaxonomy.taxeditor.cdmlib/lib/usertype.jodatime-2.0.1.jar -text
eu.etaxonomy.taxeditor.cdmlib/lib/usertype.spi-2.0.1.jar -text
eu.etaxonomy.taxeditor.cdmlib/lib/validation-api-1.0.0.GA.jar -text
eu.etaxonomy.taxeditor.cdmlib/pom.xml -text
eu.etaxonomy.taxeditor.cdmlib/src/main/java/eu/etaxonomy/cdm/api/application/CdmApplicationRemoteConfiguration.java -text
eu.etaxonomy.taxeditor.cdmlib/src/main/java/eu/etaxonomy/cdm/api/application/CdmApplicationRemoteController.java -text
+eu.etaxonomy.taxeditor.cdmlib/src/main/java/eu/etaxonomy/cdm/api/application/RemotingMonitoredGenericApplicationContext.java -text
+eu.etaxonomy.taxeditor.cdmlib/src/main/java/eu/etaxonomy/cdm/api/application/RemotingMonitoredListableBeanFactory.java -text
eu.etaxonomy.taxeditor.cdmlib/src/main/java/eu/etaxonomy/cdm/api/cache/CdmServiceCacher.java -text
-eu.etaxonomy.taxeditor.cdmlib/src/main/java/eu/etaxonomy/cdm/api/lazyloading/CdmLazyLoader.java -text
-eu.etaxonomy.taxeditor.cdmlib/src/main/java/eu/etaxonomy/cdm/remote/CdmPersistentRemoteSource.java -text
-eu.etaxonomy.taxeditor.cdmlib/src/main/java/eu/etaxonomy/cdm/remote/CdmRemoteSource.java -text
-eu.etaxonomy.taxeditor.cdmlib/src/main/java/eu/etaxonomy/cdm/remote/CdmRemoteSourceBase.java -text
-eu.etaxonomy.taxeditor.cdmlib/src/main/java/eu/etaxonomy/cdm/remote/CdmRemoteSourceException.java -text
-eu.etaxonomy.taxeditor.cdmlib/src/main/java/eu/etaxonomy/cdm/remote/ICdmRemoteSource.java -text
+eu.etaxonomy.taxeditor.cdmlib/src/main/java/eu/etaxonomy/taxeditor/remoting/CdmEagerLoadingException.java -text
+eu.etaxonomy.taxeditor.cdmlib/src/main/java/eu/etaxonomy/taxeditor/remoting/CdmRemotingException.java -text
+eu.etaxonomy.taxeditor.cdmlib/src/main/java/eu/etaxonomy/taxeditor/remoting/cache/CacheLoader.java -text
+eu.etaxonomy.taxeditor.cdmlib/src/main/java/eu/etaxonomy/taxeditor/remoting/cache/CdmClientCacheException.java -text
+eu.etaxonomy.taxeditor.cdmlib/src/main/java/eu/etaxonomy/taxeditor/remoting/cache/CdmEntityCacheKey.java -text
+eu.etaxonomy.taxeditor.cdmlib/src/main/java/eu/etaxonomy/taxeditor/remoting/cache/CdmModelCacher.java -text
+eu.etaxonomy.taxeditor.cdmlib/src/main/java/eu/etaxonomy/taxeditor/remoting/cache/CdmModelFieldPropertyFromClass.java -text
+eu.etaxonomy.taxeditor.cdmlib/src/main/java/eu/etaxonomy/taxeditor/remoting/cache/CdmRemoteCacheManager.java -text
+eu.etaxonomy.taxeditor.cdmlib/src/main/java/eu/etaxonomy/taxeditor/remoting/cache/CdmTransientEntityCacher.java -text
+eu.etaxonomy.taxeditor.cdmlib/src/main/java/eu/etaxonomy/taxeditor/remoting/cache/EntityCacherDebugResult.java -text
+eu.etaxonomy.taxeditor.cdmlib/src/main/java/eu/etaxonomy/taxeditor/remoting/cache/ProxyUtils.java -text
+eu.etaxonomy.taxeditor.cdmlib/src/main/java/eu/etaxonomy/taxeditor/remoting/server/CDMServerException.java -text
+eu.etaxonomy.taxeditor.cdmlib/src/main/java/eu/etaxonomy/taxeditor/remoting/source/CdmPersistentRemoteSource.java -text
+eu.etaxonomy.taxeditor.cdmlib/src/main/java/eu/etaxonomy/taxeditor/remoting/source/CdmRemoteSource.java -text
+eu.etaxonomy.taxeditor.cdmlib/src/main/java/eu/etaxonomy/taxeditor/remoting/source/CdmRemoteSourceBase.java -text
+eu.etaxonomy.taxeditor.cdmlib/src/main/java/eu/etaxonomy/taxeditor/remoting/source/CdmRemoteSourceException.java -text
+eu.etaxonomy.taxeditor.cdmlib/src/main/java/eu/etaxonomy/taxeditor/remoting/source/CdmServerInfo.java -text
+eu.etaxonomy.taxeditor.cdmlib/src/main/java/eu/etaxonomy/taxeditor/remoting/source/ICdmRemoteSource.java -text
+eu.etaxonomy.taxeditor.cdmlib/src/main/java/eu/etaxonomy/taxeditor/service/CachedCommonServiceImpl.java -text
+eu.etaxonomy.taxeditor.cdmlib/src/main/java/eu/etaxonomy/taxeditor/service/CdmAuthenticatedHttpInvokerRequestExecutor.java -text
+eu.etaxonomy.taxeditor.cdmlib/src/main/java/eu/etaxonomy/taxeditor/service/CdmServiceInterceptorException.java -text
+eu.etaxonomy.taxeditor.cdmlib/src/main/java/eu/etaxonomy/taxeditor/service/CdmServiceRequestExecutor.java -text
+eu.etaxonomy.taxeditor.cdmlib/src/main/java/eu/etaxonomy/taxeditor/service/ICachedCommonService.java -text
+eu.etaxonomy.taxeditor.cdmlib/src/main/java/eu/etaxonomy/taxeditor/service/TermServiceRequestExecutor.java -text
+eu.etaxonomy.taxeditor.cdmlib/src/main/java/eu/etaxonomy/taxeditor/session/CdmClientSessionException.java -text
+eu.etaxonomy.taxeditor.cdmlib/src/main/java/eu/etaxonomy/taxeditor/session/CdmEntitySession.java -text
+eu.etaxonomy.taxeditor.cdmlib/src/main/java/eu/etaxonomy/taxeditor/session/CdmEntitySessionManager.java -text
+eu.etaxonomy.taxeditor.cdmlib/src/main/java/eu/etaxonomy/taxeditor/session/ICdmEntitySession.java -text
+eu.etaxonomy.taxeditor.cdmlib/src/main/java/eu/etaxonomy/taxeditor/session/ICdmEntitySessionEnabled.java -text
+eu.etaxonomy.taxeditor.cdmlib/src/main/java/eu/etaxonomy/taxeditor/session/ICdmEntitySessionManager.java -text
+eu.etaxonomy.taxeditor.cdmlib/src/main/java/eu/etaxonomy/taxeditor/session/ICdmEntitySessionManagerObserver.java -text
+eu.etaxonomy.taxeditor.cdmlib/src/main/java/eu/etaxonomy/taxeditor/session/mock/MockCdmEntitySession.java -text
+eu.etaxonomy.taxeditor.cdmlib/src/main/java/eu/etaxonomy/taxeditor/session/mock/MockCdmEntitySessionManager.java -text
eu.etaxonomy.taxeditor.cdmlib/src/main/java/org/hibernate/collection/internal/AbstractPersistentCollection.java -text
eu.etaxonomy.taxeditor.cdmlib/src/main/java/org/hibernate/proxy/AbstractLazyInitializer.java -text
+eu.etaxonomy.taxeditor.cdmlib/src/main/resources/cdmlib-ehcache.xml -text
+eu.etaxonomy.taxeditor.cdmlib/src/main/resources/etc/jetty/.svnignore -text
+eu.etaxonomy.taxeditor.cdmlib/src/main/resources/etc/jetty/cdmlib-remote-webapp.war -text
+eu.etaxonomy.taxeditor.cdmlib/src/main/resources/etc/jetty/jetty-runner-9.2.3.v20140905.jar -text
+eu.etaxonomy.taxeditor.cdmlib/src/main/resources/etc/jetty/start-9.2.3.v20140905.jar -text
eu.etaxonomy.taxeditor.cdmlib/src/main/resources/eu/etaxonomy/cdm/config.properties -text
eu.etaxonomy.taxeditor.cdmlib/src/main/resources/eu/etaxonomy/cdm/httpInvokerServiceClients.xml -text
eu.etaxonomy.taxeditor.cdmlib/src/main/resources/eu/etaxonomy/cdm/localApplicationContext.xml -text
+eu.etaxonomy.taxeditor.cdmlib/src/main/resources/eu/etaxonomy/cdm/mappings/hibernate.cfg.xml -text
eu.etaxonomy.taxeditor.cdmlib/src/main/resources/eu/etaxonomy/cdm/remotingApplicationContext.xml -text
eu.etaxonomy.taxeditor.cdmlib/src/main/resources/eu/etaxonomy/cdm/remoting_persistence_security.xml -text
eu.etaxonomy.taxeditor.cdmlib/src/main/resources/eu/etaxonomy/cdm/remoting_services_security.xml -text
-eu.etaxonomy.taxeditor.cdmlib/src/test/resources/eu/etaxonomy/cdm/datasources/cdm.datasources.xml -text
+eu.etaxonomy.taxeditor.cdmlib/src/main/resources/log4j.properties -text
eu.etaxonomy.taxeditor.editor/.classpath -text
eu.etaxonomy.taxeditor.editor/.project -text
eu.etaxonomy.taxeditor.editor/META-INF/MANIFEST.MF -text
eu.etaxonomy.taxeditor.editor/plugin.xml -text
eu.etaxonomy.taxeditor.editor/pom.xml -text
eu.etaxonomy.taxeditor.editor/src/main/java/eu/etaxonomy/taxeditor/editor/CdmDataTransfer.java -text
+eu.etaxonomy.taxeditor.editor/src/main/java/eu/etaxonomy/taxeditor/editor/CdmEntitySessionInput.java -text
eu.etaxonomy.taxeditor.editor/src/main/java/eu/etaxonomy/taxeditor/editor/ChooseFromMultipleTaxonNodesDialog.java -text
eu.etaxonomy.taxeditor.editor/src/main/java/eu/etaxonomy/taxeditor/editor/EditorCdmViewer.java -text
eu.etaxonomy.taxeditor.editor/src/main/java/eu/etaxonomy/taxeditor/editor/EditorStateManager.java -text
eu.etaxonomy.taxeditor.store/src/main/java/eu/etaxonomy/taxeditor/featuretree/SelectFeatureTreeWizard.java -text
eu.etaxonomy.taxeditor.store/src/main/java/eu/etaxonomy/taxeditor/featuretree/SelectFeatureTreeWizardPage.java -text
eu.etaxonomy.taxeditor.store/src/main/java/eu/etaxonomy/taxeditor/handler/OpenDistributionEditorWizardHandler.java -text
+<<<<<<< HEAD
+eu.etaxonomy.taxeditor.store/src/main/java/eu/etaxonomy/taxeditor/handler/OpenInspectSessionsHandler.java -text
+=======
eu.etaxonomy.taxeditor.store/src/main/java/eu/etaxonomy/taxeditor/handler/OpenHandler.java -text
+>>>>>>> 02176688eaa23a31ff5b71c317cb5ee685483aa4
eu.etaxonomy.taxeditor.store/src/main/java/eu/etaxonomy/taxeditor/handler/OpenPasswordWizzardHandler.java -text
eu.etaxonomy.taxeditor.store/src/main/java/eu/etaxonomy/taxeditor/handler/ShowLoginWindowHandler.java -text
+eu.etaxonomy.taxeditor.store/src/main/java/eu/etaxonomy/taxeditor/handler/ShowRemotingLoginWindowHandler.java -text
eu.etaxonomy.taxeditor.store/src/main/java/eu/etaxonomy/taxeditor/identificationkey/AbstractIdentificaitonKeyWizard.java -text
eu.etaxonomy.taxeditor.store/src/main/java/eu/etaxonomy/taxeditor/io/AbstractIOManager.java -text
eu.etaxonomy.taxeditor.store/src/main/java/eu/etaxonomy/taxeditor/io/ExportManager.java -text
eu.etaxonomy.taxeditor.store/src/main/java/eu/etaxonomy/taxeditor/operation/AbstractPostOperation.java -text
eu.etaxonomy.taxeditor.store/src/main/java/eu/etaxonomy/taxeditor/operation/AbstractPostTaxonOperation.java -text
eu.etaxonomy.taxeditor.store/src/main/java/eu/etaxonomy/taxeditor/operation/IPostOperationEnabled.java -text
-eu.etaxonomy.taxeditor.store/src/main/java/eu/etaxonomy/taxeditor/parser/MatchStrategyConfigurator.java -text
eu.etaxonomy.taxeditor.store/src/main/java/eu/etaxonomy/taxeditor/parser/ParseHandler.java -text
eu.etaxonomy.taxeditor.store/src/main/java/eu/etaxonomy/taxeditor/preference/CdmPreferences.java -text
eu.etaxonomy.taxeditor.store/src/main/java/eu/etaxonomy/taxeditor/preference/CdmStorePropertyTester.java -text
eu.etaxonomy.taxeditor.store/src/main/java/eu/etaxonomy/taxeditor/ui/combo/VocabularyComboElement.java -text
eu.etaxonomy.taxeditor.store/src/main/java/eu/etaxonomy/taxeditor/ui/dialog/DefaultLanguageDialog.java -text
eu.etaxonomy.taxeditor.store/src/main/java/eu/etaxonomy/taxeditor/ui/dialog/LoginDialog.java -text
+eu.etaxonomy.taxeditor.store/src/main/java/eu/etaxonomy/taxeditor/ui/dialog/RemotingLoginDialog.java -text
eu.etaxonomy.taxeditor.store/src/main/java/eu/etaxonomy/taxeditor/ui/dialog/UriDialog.java -text
eu.etaxonomy.taxeditor.store/src/main/java/eu/etaxonomy/taxeditor/ui/dialog/deleteConfigurator/DeleteConfiguratorComposite.java -text
eu.etaxonomy.taxeditor.store/src/main/java/eu/etaxonomy/taxeditor/ui/dialog/deleteConfigurator/DeleteConfiguratorDialog.java -text
eu.etaxonomy.taxeditor.store/src/main/java/eu/etaxonomy/taxeditor/view/detail/DetailsViewPart.java -text
eu.etaxonomy.taxeditor.store/src/main/java/eu/etaxonomy/taxeditor/view/detail/DetailsViewer.java -text
eu.etaxonomy.taxeditor.store/src/main/java/eu/etaxonomy/taxeditor/view/reporting/ReportingViewPart.java -text
+eu.etaxonomy.taxeditor.store/src/main/java/eu/etaxonomy/taxeditor/view/sessions/InspectSessionsDialog.java -text
+eu.etaxonomy.taxeditor.store/src/main/java/eu/etaxonomy/taxeditor/view/sessions/SessionsViewPart.java -text
eu.etaxonomy.taxeditor.store/src/main/java/eu/etaxonomy/taxeditor/view/specimenSearch/SpecimenProviderSelectionComposite.java -text
eu.etaxonomy.taxeditor.store/src/main/java/eu/etaxonomy/taxeditor/view/specimenSearch/SpecimenProviderSelectionController.java -text
eu.etaxonomy.taxeditor.store/src/main/java/eu/etaxonomy/taxeditor/view/specimenSearch/SpecimenSearchComposite.java -text
eu.etaxonomy.taxeditor.test/META-INF/MANIFEST.MF -text
eu.etaxonomy.taxeditor.test/build.properties -text
eu.etaxonomy.taxeditor.test/ide/eclipse/EDITor[!!-~]Tests.launch -text
+eu.etaxonomy.taxeditor.test/lib/byte-buddy-0.5.1.jar -text
eu.etaxonomy.taxeditor.test/pom.xml -text
+eu.etaxonomy.taxeditor.test/src/main/resources/cdmlib-ehcache.xml -text
+eu.etaxonomy.taxeditor.test/src/main/resources/datasources.xml -text
+eu.etaxonomy.taxeditor.test/src/main/resources/eu/etaxonomy/cdm/api/cache/CdmClientCachingTest.xml -text
+eu.etaxonomy.taxeditor.test/src/main/resources/eu/etaxonomy/cdm/cdm.datasources.xml -text
+eu.etaxonomy.taxeditor.test/src/main/resources/eu/etaxonomy/cdm/model/PolytomousKeyTest.xml -text
+eu.etaxonomy.taxeditor.test/src/main/resources/eu/etaxonomy/cdm/model/TaxonNameEditorTest.xml -text
+eu.etaxonomy.taxeditor.test/src/main/resources/eu/etaxonomy/cdm/model/TaxonNavigatorTest.xml -text
+eu.etaxonomy.taxeditor.test/src/main/resources/eu/etaxonomy/cdm/testRemotingApplicationContext.xml -text
+eu.etaxonomy.taxeditor.test/src/main/resources/eu/etaxonomy/taxeditor/lazyloading/AbstractLazyInitializerTest.xml -text
+eu.etaxonomy.taxeditor.test/src/main/resources/eu/etaxonomy/taxeditor/lazyloading/CdmEntityCacherTest.xml -text
+eu.etaxonomy.taxeditor.test/src/main/resources/eu/etaxonomy/taxeditor/remoting/session/CdmEntitySessionManagerTest.xml -text
+eu.etaxonomy.taxeditor.test/src/main/resources/h2/cdmTest.h2.db -text
+eu.etaxonomy.taxeditor.test/src/main/resources/h2/cdmTest.trace.db -text
+eu.etaxonomy.taxeditor.test/src/main/resources/log4j.properties -text
eu.etaxonomy.taxeditor.test/src/main/resources/log4j.xml -text
+eu.etaxonomy.taxeditor.test/src/main/resources/unitils.properties -text
+eu.etaxonomy.taxeditor.test/src/test/java/eu/etaxonomy/cdm/api/cache/CdmClientCachingTest.java -text
+eu.etaxonomy.taxeditor.test/src/test/java/eu/etaxonomy/cdm/api/cache/CdmModelGetMethodCacherTest.java -text
+eu.etaxonomy.taxeditor.test/src/test/java/eu/etaxonomy/cdm/model/PolytomousKeyTest.java -text
+eu.etaxonomy.taxeditor.test/src/test/java/eu/etaxonomy/cdm/model/TaxonNameEditorTest.java -text
+eu.etaxonomy.taxeditor.test/src/test/java/eu/etaxonomy/cdm/model/TaxonNavigatorTest.java -text
eu.etaxonomy.taxeditor.test/src/test/java/eu/etaxonomy/taxeditor/application/menu/general/NewMenuTest.java -text
+eu.etaxonomy.taxeditor.test/src/test/java/eu/etaxonomy/taxeditor/httpinvoker/BaseRemotingTest.java -text
+eu.etaxonomy.taxeditor.test/src/test/java/eu/etaxonomy/taxeditor/httpinvoker/CDMServer.java -text
+eu.etaxonomy.taxeditor.test/src/test/java/eu/etaxonomy/taxeditor/httpinvoker/CdmPersistentRemoteSourceTest.java -text
+eu.etaxonomy.taxeditor.test/src/test/java/eu/etaxonomy/taxeditor/httpinvoker/CdmRemoteSourceTest.java -text
+eu.etaxonomy.taxeditor.test/src/test/java/eu/etaxonomy/taxeditor/httpinvoker/CdmServerTest.java -text
+eu.etaxonomy.taxeditor.test/src/test/java/eu/etaxonomy/taxeditor/httpinvoker/CdmServerTestManager.java -text
+eu.etaxonomy.taxeditor.test/src/test/java/eu/etaxonomy/taxeditor/httpinvoker/HttpInvokerServicesTest.java -text
+eu.etaxonomy.taxeditor.test/src/test/java/eu/etaxonomy/taxeditor/lazyloading/AbstractLazyInitializerTest.java -text
+eu.etaxonomy.taxeditor.test/src/test/java/eu/etaxonomy/taxeditor/lazyloading/CdmEntityCacherTest.java -text
+eu.etaxonomy.taxeditor.test/src/test/java/eu/etaxonomy/taxeditor/lazyloading/CdmServiceCacherTest.java -text
+eu.etaxonomy.taxeditor.test/src/test/java/eu/etaxonomy/taxeditor/lazyloading/RemoteLazyLoadingTest.java -text
+eu.etaxonomy.taxeditor.test/src/test/java/eu/etaxonomy/taxeditor/lazyloading/RemotePersistentCollectionTest.java -text
eu.etaxonomy.taxeditor.test/src/test/java/eu/etaxonomy/taxeditor/navigation/navigator/contextmenu/ClassificationTest.java -text
eu.etaxonomy.taxeditor.test/src/test/java/eu/etaxonomy/taxeditor/newWizard/NewTaxonWizardTest.java -text
+eu.etaxonomy.taxeditor.test/src/test/java/eu/etaxonomy/taxeditor/operations/OperationTestBase.java -text
+eu.etaxonomy.taxeditor.test/src/test/java/eu/etaxonomy/taxeditor/service/ITestService.java -text
+eu.etaxonomy.taxeditor.test/src/test/java/eu/etaxonomy/taxeditor/service/ServiceInterceptorTest.java -text
+eu.etaxonomy.taxeditor.test/src/test/java/eu/etaxonomy/taxeditor/service/ServiceRebasingTest.java -text
+eu.etaxonomy.taxeditor.test/src/test/java/eu/etaxonomy/taxeditor/service/TargetTestService.java -text
+eu.etaxonomy.taxeditor.test/src/test/java/eu/etaxonomy/taxeditor/service/TestService.java -text
+eu.etaxonomy.taxeditor.test/src/test/java/eu/etaxonomy/taxeditor/session/CdmEntitySessionManagerTest.java -text
+eu.etaxonomy.taxeditor.test/src/test/java/eu/etaxonomy/taxeditor/session/MockSessionOwner.java -text
eu.etaxonomy.taxeditor.test/src/test/java/eu/etaxonomy/taxeditor/test/AbstractEditorTest.java -text
eu.etaxonomy.taxeditor.test/src/test/java/eu/etaxonomy/taxeditor/test/ContextMenuHelper.java -text
eu.etaxonomy.taxeditor.test/src/test/java/eu/etaxonomy/taxeditor/test/SwtBotUtils.java -text
+eu.etaxonomy.taxeditor.test/src/test/java/eu/etaxonomy/taxeditor/ui/dialogs/CdmServerInfoTest.java -text
eu.etaxonomy.taxeditor.test/src/test/java/eu/etaxonomy/taxeditor/ui/dialogs/LoginDialogTest.java -text
eu.etaxonomy.taxeditor.test/src/test/java/eu/etaxonomy/taxeditor/ui/selection/AbstractSelectionElementTest.java -text
eu.etaxonomy.taxeditor.test/src/test/java/eu/etaxonomy/taxeditor/ui/selection/ClassificationSelectionElementTest.java -text
/.project
+eu.etaxonomy.taxeditor.cdmlib/src/main/resources/etc/jetty/*
eu.etaxonomy.taxeditor.application/.settings
eu.etaxonomy.taxeditor.application/target
eu.etaxonomy.taxeditor.bulkeditor/.settings
eu.etaxonomy.taxeditor.cdmlib/cdmlib-*.jar
eu.etaxonomy.taxeditor.cdmlib/cdmlib-*.zip
eu.etaxonomy.taxeditor.cdmlib/dist
+eu.etaxonomy.taxeditor.cdmlib/lib/cdm-server*
eu.etaxonomy.taxeditor.cdmlib/lib/cdmlib*
eu.etaxonomy.taxeditor.cdmlib/lib/org.eclipse.equinox.servletbridge.extensionbundle-1.2.0.v20100503.jar
eu.etaxonomy.taxeditor.cdmlib/lib/org.eclipse.equinox.transforms.hook-1.0.300.v20100719.jar
<classpathentry kind="con" path="org.eclipse.jdt.launching.JRE_CONTAINER/org.eclipse.jdt.internal.debug.ui.launcher.StandardVMType/JavaSE-1.6"/>
<classpathentry kind="con" path="org.eclipse.pde.core.requiredPlugins"/>
<classpathentry including="**/*.java" kind="src" path="src/main/java"/>
- <classpathentry kind="src" path="src/main/resources"/>
+ <classpathentry kind="src" path="src/test/java"/>
<classpathentry kind="output" path="target/classes"/>
</classpath>
Bundle-ManifestVersion: 2
Bundle-Name: Application
Bundle-SymbolicName: eu.etaxonomy.taxeditor.application;singleton:=true
-Bundle-Version: 3.8.0.qualifier
+Bundle-Version: 3.12.0.qualifier
Bundle-Activator: eu.etaxonomy.taxeditor.TaxonomicEditorPlugin
Bundle-Vendor: EDIT
Bundle-Localization: OSGI-INF/l10n/plugin
Export-Package: eu.etaxonomy.taxeditor
Bundle-ActivationPolicy: lazy
Bundle-RequiredExecutionEnvironment: JavaSE-1.6
-Import-Package: org.apache.log4j,
+Import-Package: eu.etaxonomy.cdm.database,
+ org.apache.log4j,
org.eclipse.equinox.app,
org.eclipse.equinox.p2.repository.metadata,
org.osgi.framework,
<parent>
<groupId>eu.etaxonomy</groupId>
<artifactId>taxeditor-parent</artifactId>
- <version>3.8.0-SNAPSHOT</version>
+ <version>3.12.0-SNAPSHOT</version>
</parent>
<modelVersion>4.0.0</modelVersion>
import eu.etaxonomy.taxeditor.store.CdmStore;
import eu.etaxonomy.taxeditor.ui.dialog.LoginDialog;
import eu.etaxonomy.taxeditor.update.P2Util;
+import eu.etaxonomy.taxeditor.util.ApplicationUtil;
/**
* <p>ApplicationWorkbenchWindowAdvisor class.</p>
configurer.setShowCoolBar(true);
configurer.setShowStatusLine(true);
configurer.setShowPerspectiveBar(true);
- configurer.setTitle("EDIT Taxonomic Editor " + ApplicationUtil.getVersion());
+ configurer.setTitle(ApplicationUtil.getTitle());
configurer.setShowProgressIndicator(true);
CdmDataSourceRepository.createDefaultH2DataSource();
import org.eclipse.core.runtime.IProgressMonitor;
import org.eclipse.core.runtime.IStatus;
-import org.eclipse.core.runtime.NullProgressMonitor;
import org.eclipse.core.runtime.OperationCanceledException;
import org.eclipse.core.runtime.Status;
import org.eclipse.core.runtime.jobs.IJobChangeEvent;
import org.eclipse.equinox.internal.p2.ui.ProvUI;
import org.eclipse.equinox.internal.p2.ui.model.ElementUtils;
import org.eclipse.equinox.internal.p2.ui.model.MetadataRepositoryElement;
-import org.eclipse.equinox.p2.repository.IRepository;
-import org.eclipse.equinox.p2.repository.IRepositoryManager;
-import org.eclipse.equinox.p2.repository.metadata.IMetadataRepository;
-import org.eclipse.equinox.p2.repository.metadata.IMetadataRepositoryManager;
import org.eclipse.equinox.p2.core.IProvisioningAgent;
import org.eclipse.equinox.p2.core.ProvisionException;
import org.eclipse.equinox.p2.operations.ProvisioningJob;
import org.eclipse.equinox.p2.operations.ProvisioningSession;
-import org.eclipse.equinox.p2.operations.RepositoryTracker;
import org.eclipse.equinox.p2.operations.Update;
import org.eclipse.equinox.p2.operations.UpdateOperation;
+import org.eclipse.equinox.p2.repository.IRepository;
+import org.eclipse.equinox.p2.repository.IRepositoryManager;
+import org.eclipse.equinox.p2.repository.metadata.IMetadataRepositoryManager;
import org.eclipse.equinox.p2.ui.ProvisioningUI;
import org.eclipse.swt.widgets.Display;
import org.eclipse.ui.PlatformUI;
import org.osgi.framework.BundleContext;
import org.osgi.framework.ServiceReference;
-import eu.etaxonomy.taxeditor.ApplicationUtil;
import eu.etaxonomy.taxeditor.TaxonomicEditorPlugin;
import eu.etaxonomy.taxeditor.model.MessagingUtils;
import eu.etaxonomy.taxeditor.preference.PreferencesUtil;
+import eu.etaxonomy.taxeditor.util.ApplicationUtil;
/**
* This class is a utility class for updating the editor from a p2 update site,
*
*/
public static void checkForUpdates() {
- // the main job which performs the update
+
Job updateJob = new Job("Update Job") {
@Override
public IStatus run(IProgressMonitor monitor) {
*/
private static IStatus doCheckForUpdates(IProgressMonitor monitor) {
+ // force refresh all the caches before
+ IMetadataRepositoryManager metaManager = ProvUI.getMetadataRepositoryManager(ProvisioningUI.getDefaultUI().getSession());
+ URI[] repos = metaManager.getKnownRepositories(IRepositoryManager.REPOSITORIES_ALL);
+ for(URI repo : repos) {
+ try {
+ metaManager.refreshRepository(repo, monitor);
+ } catch (ProvisionException pe) {
+ IStatus errorStatus = new Status(IStatus.ERROR, TaxonomicEditorPlugin.PLUGIN_ID,
+ "Error occured while reloading cache.", pe);
+
+ } catch (OperationCanceledException oce) {
+ IStatus errorStatus = new Status(IStatus.ERROR, TaxonomicEditorPlugin.PLUGIN_ID,
+ "Error occured while reloading cache.", oce);
+ }
+ }
BundleContext bundleContext = TaxonomicEditorPlugin.getContext();
ServiceReference reference = bundleContext.getServiceReference(IProvisioningAgent.SERVICE_NAME);
if (reference == null) {
+++ /dev/null
-### ************ APPENDER ***********************************###\r
-\r
-### direct log messages to stdout ###\r
-log4j.appender.stdout=org.apache.log4j.ConsoleAppender\r
-log4j.appender.stdout.Target=System.out\r
-log4j.appender.stdout.layout=org.apache.log4j.PatternLayout\r
-log4j.appender.stdout.layout.ConversionPattern=%d{ABSOLUTE} %5p %c{1}:%L - %m%n\r
-\r
-### direct messages to file hibernate.log ###\r
-log4j.appender.file=org.apache.log4j.FileAppender\r
-log4j.appender.file.File=taxeditor.log\r
-log4j.appender.file.layout=org.apache.log4j.PatternLayout\r
-log4j.appender.file.layout.ConversionPattern=%d{ABSOLUTE} %5p %c{1}:%L - %m%n\r
-\r
-### ************* LOG LEVELS *********************************###\r
-\r
-### set log levels - for more verbose logging change 'info' to 'debug' ###\r
-### levels: error, warn, debug, info\r
-log4j.rootLogger=INFO, stdout\r
-\r
-### set directory-specific levels below\r
-\r
-### basic level for editor directory\r
-log4j.logger.eu.etaxonomy.taxeditor.editor = WARN, stdout \r
-\r
-log4j.logger.eu.etaxonomy.taxeditor.editor.handler = DEBUG, stdout\r
-\r
-### log level for conversation handler\r
-#log4j.logger.eu.etaxonomy.cdm.api.application = DEBUG, stdout\r
-<?xml version="1.0" encoding="UTF-8"?>\r
-<classpath>\r
- <classpathentry kind="con" path="org.eclipse.jdt.launching.JRE_CONTAINER/org.eclipse.jdt.internal.debug.ui.launcher.StandardVMType/JavaSE-1.6"/>\r
- <classpathentry kind="con" path="org.eclipse.pde.core.requiredPlugins"/>\r
- <classpathentry including="**/*.java" kind="src" path="src/main/java"/>\r
- <classpathentry including="**/*.java" kind="src" path="src/test/java"/>\r
- <classpathentry kind="output" path="target/classes"/>\r
-</classpath>\r
+<?xml version="1.0" encoding="UTF-8"?>
+<classpath>
+ <classpathentry kind="con" path="org.eclipse.jdt.launching.JRE_CONTAINER/org.eclipse.jdt.internal.debug.ui.launcher.StandardVMType/JavaSE-1.6"/>
+ <classpathentry kind="con" path="org.eclipse.pde.core.requiredPlugins"/>
+ <classpathentry including="**/*.java" kind="src" path="src/main/java"/>
+ <classpathentry including="**/*.java" kind="src" path="src/test/java"/>
+ <classpathentry kind="output" path="target/classes"/>
+</classpath>
Bundle-ManifestVersion: 2
Bundle-Name: Bulkeditor Bundle
Bundle-SymbolicName: eu.etaxonomy.taxeditor.bulkeditor;singleton:=true
-Bundle-Version: 3.8.0.qualifier
+Bundle-Version: 3.12.0.qualifier
Bundle-Activator: eu.etaxonomy.taxeditor.bulkeditor.internal.TaxeditorBulkeditorPlugin
Bundle-Vendor: EDIT
Export-Package: eu.etaxonomy.taxeditor.annotatedlineeditor,
eu.etaxonomy.taxeditor.cdmlib
Bundle-RequiredExecutionEnvironment: JavaSE-1.6
Bundle-ActivationPolicy: lazy
-Import-Package: org.eclipse.core.runtime,
+Import-Package: eu.etaxonomy.taxeditor.editor,
+ org.eclipse.core.runtime,
org.eclipse.equinox.app,
org.eclipse.jface.text,
org.eclipse.jface.text.presentation,
<parent>
<groupId>eu.etaxonomy</groupId>
<artifactId>taxeditor-parent</artifactId>
- <version>3.8.0-SNAPSHOT</version>
+ <version>3.12.0-SNAPSHOT</version>
</parent>
<modelVersion>4.0.0</modelVersion>
if (annotation instanceof IEntityContainer<?>) {
IEntityContainer<?> container = (IEntityContainer<?>) annotation;
if (container.isMarkedAsNew() || container.isDirty()) {
- persistenceService.save(container.getEntity()); // save
+ Object entity = persistenceService.save(container.getEntity()); // save
+ container.setEntity(entity);
container.setDirty(false);
container.markAsNew(false);
}
// $Id$
/**
-* Copyright (C) 2007 EDIT
-* European Distributed Institute of Taxonomy
-* http://www.e-taxonomy.eu
-*
-* The contents of this file are subject to the Mozilla Public License Version 1.1
-* See LICENSE.TXT at the top of this package for the full license terms.
-*/
+ * Copyright (C) 2007 EDIT
+ * European Distributed Institute of Taxonomy
+ * http://www.e-taxonomy.eu
+ *
+ * The contents of this file are subject to the Mozilla Public License Version 1.1
+ * See LICENSE.TXT at the top of this package for the full license terms.
+ */
package eu.etaxonomy.taxeditor.annotatedlineeditor;
import java.util.Iterator;
import eu.etaxonomy.cdm.hibernate.HibernateProxyHelper;
import eu.etaxonomy.cdm.model.common.CdmBase;
import eu.etaxonomy.cdm.persistence.hibernate.CdmDataChangeMap;
+import eu.etaxonomy.taxeditor.bulkeditor.input.AbstractBulkEditorInput;
import eu.etaxonomy.taxeditor.operation.IPostOperationEnabled;
import eu.etaxonomy.taxeditor.store.CdmStore;
*/
public class AnnotatedLineEditor extends TextEditor implements IConversationEnabled, IPostOperationEnabled {
- protected ConversationHolder conversation;
-
- private IEntityPersistenceService persistenceService;
- protected ILineDisplayStrategy lineDisplayStrategy;
-
-
- /**
- * <p>Constructor for AnnotatedLineEditor.</p>
- *
- * @param conversation a {@link eu.etaxonomy.cdm.api.conversation.ConversationHolder} object.
- */
- public AnnotatedLineEditor(ConversationHolder conversation) {
- this.conversation = conversation;
- }
-
- /* (non-Javadoc)
- * @see org.eclipse.ui.editors.text.TextEditor#doSetInput(org.eclipse.ui.IEditorInput)
- */
- /** {@inheritDoc} */
- @Override
- protected void doSetInput(IEditorInput input) throws CoreException {
-
- AnnotatedLineDocumentProvider provider = new AnnotatedLineDocumentProvider(input);
-
- provider.setLineDisplayStrategy(lineDisplayStrategy, input);
- setDocumentProvider(provider);
-
- super.doSetInput(input);
- }
-
- /**
- * <p>Setter for the field <code>persistenceService</code>.</p>
- *
- * @param persistenceService a {@link eu.etaxonomy.taxeditor.annotatedlineeditor.IEntityPersistenceService} object.
- */
- protected void setPersistenceService(
- IEntityPersistenceService persistenceService) {
- this.persistenceService = persistenceService;
- }
-
- /**
- * <p>Getter for the field <code>persistenceService</code>.</p>
- *
- * @return a {@link eu.etaxonomy.taxeditor.annotatedlineeditor.IEntityPersistenceService} object.
- */
- protected IEntityPersistenceService getPersistenceService() {
- return persistenceService;
- }
-
- /**
- * <p>Setter for the field <code>lineDisplayStrategy</code>.</p>
- *
- * @param lineDisplayStrategy a {@link eu.etaxonomy.taxeditor.annotatedlineeditor.ILineDisplayStrategy} object.
- */
- protected void setLineDisplayStrategy(
- ILineDisplayStrategy lineDisplayStrategy) {
- this.lineDisplayStrategy = lineDisplayStrategy;
- }
-
- /** {@inheritDoc} */
- @Override
- protected ISourceViewer createSourceViewer(Composite parent,
- IVerticalRuler ruler, int styles) {
-
- fAnnotationAccess= getAnnotationAccess();
- fOverviewRuler= createOverviewRuler(getSharedColors());
- LineSelectionViewer viewer = new LineSelectionViewer(parent, ruler, getOverviewRuler(),
- isOverviewRulerVisible(), styles);
-// isOverviewRulerVisible(), styles | SWT.WRAP);
- getSourceViewerDecorationSupport(viewer);
-
- return viewer;
- }
-
- /**
- * Create an annotated line with an "empty" entity, i.e. using the editor
- * input's default entity type and a zero-length title cache.
- *
- * @return a {@link eu.etaxonomy.taxeditor.annotatedlineeditor.LineAnnotation} object.
- */
- public LineAnnotation createAnnotatedLineNewObject() {
-
- // Create new object
-
- AnnotatedLineDocumentProvider documentProvider = (AnnotatedLineDocumentProvider) getDocumentProvider();
- IEntityCreator entityCreator = documentProvider.getEntityCreator(getEditorInput());
- Object entity = entityCreator.createEntity(null);
-
- LineAnnotation annotation = createAnnotatedLine(entity);
- if (annotation != null) {
- annotation.markAsNew(true);
- }
- return annotation;
- }
-
- /**
- * Create an annotated line, first creating an entity of type "key" - this key
- * must be recognized by the editor's entity creator.
- *
- * @param key a {@link java.lang.Object} object.
- * @param titleCache a {@link java.lang.String} object.
- * @return a {@link eu.etaxonomy.taxeditor.annotatedlineeditor.LineAnnotation} object.
- */
- public LineAnnotation createAnnotatedLineNewObject(Object key, String titleCache) {
-
-
-
- // Create new object
- Object entity = ((AnnotatedLineDocumentProvider) getDocumentProvider()).
- getEntityCreator(getEditorInput()).createEntity(key, titleCache);
- // checks if the creator also saves the entity (in a different conversation), in which case
- // we need to bind back this editors conversation
- // we also need to reload the entity because the conversation used to
- // to create / save the entity may have been closed
- if(entity != null && ((AnnotatedLineDocumentProvider) getDocumentProvider()).getEntityCreator(getEditorInput()).savesEntity()) {
- getConversationHolder().bind();
- Object object = CdmStore.getService(IOccurrenceService.class).load(((CdmBase)entity).getUuid());
- entity = HibernateProxyHelper.deproxy(object);
- }
-
- if(entity == null) {
- return null;
- }
- LineAnnotation annotation = createAnnotatedLine(entity);
- if (annotation != null) {
- annotation.markAsNew(true);
- }
-
- return annotation;
-
- }
-
- @Override
- public boolean isDirty() {
- return super.isDirty();
- }
-
- /**
- * Creates an annotated line at the end of the document. The annotation contains the entity.
- *
- * @param entity a {@link java.lang.Object} object.
- * @return a {@link eu.etaxonomy.taxeditor.annotatedlineeditor.LineAnnotation} object.
- */
- public LineAnnotation createAnnotatedLine(Object entity) {
-
- IEditorInput input = getEditorInput();
- AnnotatedLineDocumentProvider provider = (AnnotatedLineDocumentProvider) getDocumentProvider();
-
- LineAnnotation annotation = null;
- try {
- annotation = provider.createAnnotatedLine(input, entity);
-
- // Jump to new line
- IAnnotationModel model = provider.getAnnotationModel(input);
- if(model != null){
- int start= model.getPosition(annotation).getOffset();
- selectAndReveal(start, 0);
- }
-
- } catch (BadLocationException e) {
- // TODO Auto-generated catch block
- e.printStackTrace();
- }
- return annotation;
- }
-
- /**
- * <p>removeAnnotatedLine</p>
- *
- * @param lineno a int.
- */
- public void removeAnnotatedLine(int lineno) {
- ((AnnotatedLineDocumentProvider) getDocumentProvider()).removeAnnotatedLine(lineno);
- }
-
- /**
- * <p>removeAnnotatedLine</p>
- *
- * @param annotation a {@link eu.etaxonomy.taxeditor.annotatedlineeditor.LineAnnotation} object.
- */
- public void removeAnnotatedLine(LineAnnotation annotation) {
- ((AnnotatedLineDocumentProvider) getDocumentProvider()).removeAnnotatedLine(annotation);
- }
-
- /* (non-Javadoc)
- * @see org.eclipse.ui.texteditor.AbstractTextEditor#doSave(org.eclipse.core.runtime.IProgressMonitor)
- */
- /** {@inheritDoc} */
- @Override
- public void doSave(IProgressMonitor progressMonitor) {
- if (getConversationHolder() != null) {
- if( ! getConversationHolder().isBound()){
- getConversationHolder().bind();
- }
- super.doSave(progressMonitor);
- getConversationHolder().commit(true);
- } else {
- super.doSave(progressMonitor);
- }
- firePropertyChange(PROP_DIRTY);
- }
-
- /* (non-Javadoc)
- * @see org.eclipse.ui.texteditor.AbstractTextEditor#setFocus()
- */
- /** {@inheritDoc} */
- @Override
- public void setFocus() {
- super.setFocus();
- if (getConversationHolder() != null) {
- getConversationHolder().bind();
- }
- PlatformUI.getWorkbench().getActiveWorkbenchWindow().getShell().setFocus();
- // TODO pass focus to underlying widgets
- }
-
- /* (non-Javadoc)
- * @see eu.etaxonomy.cdm.api.conversation.IConversationEnabled#getConversationHolder()
- */
- /**
- * <p>getConversationHolder</p>
- *
- * @return a {@link eu.etaxonomy.cdm.api.conversation.ConversationHolder} object.
- */
- @Override
+ protected ConversationHolder conversation;
+
+ private IEntityPersistenceService persistenceService;
+ protected ILineDisplayStrategy lineDisplayStrategy;
+
+
+ /**
+ * <p>Constructor for AnnotatedLineEditor.</p>
+ *
+ * @param conversation a {@link eu.etaxonomy.cdm.api.conversation.ConversationHolder} object.
+ */
+ public AnnotatedLineEditor(ConversationHolder conversation) {
+ this.conversation = conversation;
+ }
+
+ /* (non-Javadoc)
+ * @see org.eclipse.ui.editors.text.TextEditor#doSetInput(org.eclipse.ui.IEditorInput)
+ */
+ /** {@inheritDoc} */
+ @Override
+ protected void doSetInput(IEditorInput input) throws CoreException {
+
+ AnnotatedLineDocumentProvider provider = new AnnotatedLineDocumentProvider(input);
+
+ provider.setLineDisplayStrategy(lineDisplayStrategy, input);
+ setDocumentProvider(provider);
+
+ super.doSetInput(input);
+ }
+
+ /**
+ * <p>Setter for the field <code>persistenceService</code>.</p>
+ *
+ * @param persistenceService a {@link eu.etaxonomy.taxeditor.annotatedlineeditor.IEntityPersistenceService} object.
+ */
+ protected void setPersistenceService(
+ IEntityPersistenceService persistenceService) {
+ this.persistenceService = persistenceService;
+ }
+
+ /**
+ * <p>Getter for the field <code>persistenceService</code>.</p>
+ *
+ * @return a {@link eu.etaxonomy.taxeditor.annotatedlineeditor.IEntityPersistenceService} object.
+ */
+ protected IEntityPersistenceService getPersistenceService() {
+ return persistenceService;
+ }
+
+ /**
+ * <p>Setter for the field <code>lineDisplayStrategy</code>.</p>
+ *
+ * @param lineDisplayStrategy a {@link eu.etaxonomy.taxeditor.annotatedlineeditor.ILineDisplayStrategy} object.
+ */
+ protected void setLineDisplayStrategy(
+ ILineDisplayStrategy lineDisplayStrategy) {
+ this.lineDisplayStrategy = lineDisplayStrategy;
+ }
+
+ /** {@inheritDoc} */
+ @Override
+ protected ISourceViewer createSourceViewer(Composite parent,
+ IVerticalRuler ruler, int styles) {
+
+ fAnnotationAccess= getAnnotationAccess();
+ fOverviewRuler= createOverviewRuler(getSharedColors());
+ LineSelectionViewer viewer = new LineSelectionViewer(parent, ruler, getOverviewRuler(),
+ isOverviewRulerVisible(), styles);
+ // isOverviewRulerVisible(), styles | SWT.WRAP);
+ getSourceViewerDecorationSupport(viewer);
+
+ return viewer;
+ }
+
+ /**
+ * Create an annotated line with an "empty" entity, i.e. using the editor
+ * input's default entity type and a zero-length title cache.
+ *
+ * @return a {@link eu.etaxonomy.taxeditor.annotatedlineeditor.LineAnnotation} object.
+ */
+ public LineAnnotation createAnnotatedLineNewObject() {
+
+ // Create new object
+
+ AnnotatedLineDocumentProvider documentProvider = (AnnotatedLineDocumentProvider) getDocumentProvider();
+ IEntityCreator entityCreator = documentProvider.getEntityCreator(getEditorInput());
+ Object entity = entityCreator.createEntity(null);
+
+ LineAnnotation annotation = createAnnotatedLine(entity);
+ if (annotation != null) {
+ annotation.markAsNew(true);
+ }
+ return annotation;
+ }
+
+ /**
+ * Create an annotated line, first creating an entity of type "key" - this key
+ * must be recognized by the editor's entity creator.
+ *
+ * @param key a {@link java.lang.Object} object.
+ * @param titleCache a {@link java.lang.String} object.
+ * @return a {@link eu.etaxonomy.taxeditor.annotatedlineeditor.LineAnnotation} object.
+ */
+ public LineAnnotation createAnnotatedLineNewObject(Object key, String titleCache) {
+
+
+
+ // Create new object
+ Object entity = ((AnnotatedLineDocumentProvider) getDocumentProvider()).
+ getEntityCreator(getEditorInput()).createEntity(key, titleCache);
+ // checks if the creator also saves the entity (in a different conversation), in which case
+ // we need to bind back this editors conversation
+ // we also need to reload the entity because the conversation used to
+ // to create / save the entity may have been closed
+ if(entity != null && ((AnnotatedLineDocumentProvider) getDocumentProvider()).getEntityCreator(getEditorInput()).savesEntity()) {
+ getConversationHolder().bind();
+ Object object = CdmStore.getService(IOccurrenceService.class).load(((CdmBase)entity).getUuid());
+ entity = HibernateProxyHelper.deproxy(object);
+ }
+
+ if(entity == null) {
+ return null;
+ }
+ LineAnnotation annotation = createAnnotatedLine(entity);
+ if (annotation != null) {
+ annotation.markAsNew(true);
+ }
+
+ return annotation;
+
+ }
+
+ @Override
+ public boolean isDirty() {
+ return super.isDirty();
+ }
+
+ /**
+ * Creates an annotated line at the end of the document. The annotation contains the entity.
+ *
+ * @param entity a {@link java.lang.Object} object.
+ * @return a {@link eu.etaxonomy.taxeditor.annotatedlineeditor.LineAnnotation} object.
+ */
+ public LineAnnotation createAnnotatedLine(Object entity) {
+
+ IEditorInput input = getEditorInput();
+ AnnotatedLineDocumentProvider provider = (AnnotatedLineDocumentProvider) getDocumentProvider();
+
+ LineAnnotation annotation = null;
+ try {
+ annotation = provider.createAnnotatedLine(input, entity);
+
+ // Jump to new line
+ IAnnotationModel model = provider.getAnnotationModel(input);
+ if(model != null){
+ int start= model.getPosition(annotation).getOffset();
+ selectAndReveal(start, 0);
+ }
+
+ } catch (BadLocationException e) {
+ // TODO Auto-generated catch block
+ e.printStackTrace();
+ }
+ return annotation;
+ }
+
+ /**
+ * <p>removeAnnotatedLine</p>
+ *
+ * @param lineno a int.
+ */
+ public void removeAnnotatedLine(int lineno) {
+ ((AnnotatedLineDocumentProvider) getDocumentProvider()).removeAnnotatedLine(lineno);
+ }
+
+ /**
+ * <p>removeAnnotatedLine</p>
+ *
+ * @param annotation a {@link eu.etaxonomy.taxeditor.annotatedlineeditor.LineAnnotation} object.
+ */
+ public void removeAnnotatedLine(LineAnnotation annotation) {
+ ((AnnotatedLineDocumentProvider) getDocumentProvider()).removeAnnotatedLine(annotation);
+ }
+
+ /* (non-Javadoc)
+ * @see org.eclipse.ui.texteditor.AbstractTextEditor#doSave(org.eclipse.core.runtime.IProgressMonitor)
+ */
+ /** {@inheritDoc} */
+ @Override
+ public void doSave(IProgressMonitor progressMonitor) {
+ if (getConversationHolder() != null) {
+ if( ! getConversationHolder().isBound()){
+ getConversationHolder().bind();
+ }
+ super.doSave(progressMonitor);
+ getConversationHolder().commit(true);
+ } else {
+ super.doSave(progressMonitor);
+ }
+ firePropertyChange(PROP_DIRTY);
+ }
+
+ /* (non-Javadoc)
+ * @see org.eclipse.ui.texteditor.AbstractTextEditor#setFocus()
+ */
+ /** {@inheritDoc} */
+ @Override
+ public void setFocus() {
+ super.setFocus();
+ if (getConversationHolder() != null) {
+ getConversationHolder().bind();
+ }
+ ((AbstractBulkEditorInput)getEditorInput()).bind();
+ PlatformUI.getWorkbench().getActiveWorkbenchWindow().getShell().setFocus();
+ // TODO pass focus to underlying widgets
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.cdm.api.conversation.IConversationEnabled#getConversationHolder()
+ */
+ /**
+ * <p>getConversationHolder</p>
+ *
+ * @return a {@link eu.etaxonomy.cdm.api.conversation.ConversationHolder} object.
+ */
+ @Override
public ConversationHolder getConversationHolder() {
- return conversation;
- }
-
- /* (non-Javadoc)
- * @see eu.etaxonomy.cdm.persistence.hibernate.ICdmPostDataChangeObserver#update(eu.etaxonomy.cdm.persistence.hibernate.CdmDataChangeMap)
- */
- /** {@inheritDoc} */
- @Override
+ return conversation;
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.cdm.persistence.hibernate.ICdmPostDataChangeObserver#update(eu.etaxonomy.cdm.persistence.hibernate.CdmDataChangeMap)
+ */
+ /** {@inheritDoc} */
+ @Override
public void update(CdmDataChangeMap changeEvents) {}
- /**
- * Refreshes text in all lines.
- */
- protected void refreshLineDisplay() {
- IDocumentProvider provider = getDocumentProvider();
- IEditorInput input = getEditorInput();
- IAnnotationModel model = provider.getAnnotationModel(input);
- Iterator iter = getDocumentProvider().getAnnotationModel(getEditorInput()).getAnnotationIterator();
- while (iter.hasNext()) {
- Object next = iter.next();
- if (next instanceof LineAnnotation) {
- LineAnnotation annotation = (LineAnnotation) next;
- ((AnnotatedLineDocumentProvider) getDocumentProvider()).
- updateLineFromAnnotation(annotation);
- }
- }
- }
-
- /* (non-Javadoc)
- * @see eu.etaxonomy.taxeditor.operations.IPostOperationEnabled#postOperation(eu.etaxonomy.cdm.model.common.CdmBase)
- */
- /** {@inheritDoc} */
- @Override
+ /**
+ * Refreshes text in all lines.
+ */
+ protected void refreshLineDisplay() {
+ IDocumentProvider provider = getDocumentProvider();
+ IEditorInput input = getEditorInput();
+ IAnnotationModel model = provider.getAnnotationModel(input);
+ Iterator iter = getDocumentProvider().getAnnotationModel(getEditorInput()).getAnnotationIterator();
+ while (iter.hasNext()) {
+ Object next = iter.next();
+ if (next instanceof LineAnnotation) {
+ LineAnnotation annotation = (LineAnnotation) next;
+ ((AnnotatedLineDocumentProvider) getDocumentProvider()).
+ updateLineFromAnnotation(annotation);
+ }
+ }
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.operations.IPostOperationEnabled#postOperation(eu.etaxonomy.cdm.model.common.CdmBase)
+ */
+ /** {@inheritDoc} */
+ @Override
public boolean postOperation(CdmBase objectAffectedByOperation) {
- refreshLineDisplay();
-
- return true;
- }
-
- /* (non-Javadoc)
- * @see org.eclipse.ui.editors.text.TextEditor#dispose()
- */
- /** {@inheritDoc} */
- @Override
- public void dispose() {
- super.dispose();
- conversation.close();
- }
-
- /**
- * <p>onComplete</p>
- *
- * @return a boolean.
- */
- @Override
+ refreshLineDisplay();
+
+ return true;
+ }
+
+ /* (non-Javadoc)
+ * @see org.eclipse.ui.editors.text.TextEditor#dispose()
+ */
+ /** {@inheritDoc} */
+ @Override
+ public void dispose() {
+ super.dispose();
+ conversation.close();
+ ((AbstractBulkEditorInput)getEditorInput()).dispose();
+ }
+
+ /**
+ * <p>onComplete</p>
+ *
+ * @return a boolean.
+ */
+ @Override
public boolean onComplete() {
- // TODO Auto-generated method stub
- return false;
- }
+ // TODO Auto-generated method stub
+ return false;
+ }
+
}
// $Id$
/**
* Copyright (C) 2007 EDIT
-* European Distributed Institute of Taxonomy
+* European Distributed Institute of Taxonomy
* http://www.e-taxonomy.eu
-*
+*
* The contents of this file are subject to the Mozilla Public License Version 1.1
* See LICENSE.TXT at the top of this package for the full license terms.
*/
* @return a T object.
*/
T getEntity();
-
+
+ void setEntity(Object entity);
+
/**
* <p>getEditableText</p>
*
* @return a {@link java.lang.String} object.
*/
String getEditableText();
-
+
/**
* <p>getAttachedEntities</p>
*
* @return a {@link java.util.Set} object.
*/
Set<T> getAttachedEntities();
-
+
/**
* <p>markAsMerged</p>
*
* @param mergeTarget a T object.
*/
void markAsMerged(T mergeTarget);
-
+
/**
* <p>markAsDeleted</p>
*/
void markAsDeleted();
-
+
/**
* <p>markAsNew</p>
*
* @param isNew a boolean.
*/
void markAsNew(boolean isNew);
-
+
/**
* <p>isMarkedAsMerged</p>
*
* @return a boolean.
*/
boolean isMarkedAsMerged();
-
+
/**
* <p>isMarkedAsDeleted</p>
*
* @return a boolean.
*/
boolean isMarkedAsDeleted();
-
+
/**
* <p>isMarkedAsNew</p>
*
// $Id$
/**
* Copyright (C) 2007 EDIT
-* European Distributed Institute of Taxonomy
+* European Distributed Institute of Taxonomy
* http://www.e-taxonomy.eu
-*
+*
* The contents of this file are subject to the Mozilla Public License Version 1.1
* See LICENSE.TXT at the top of this package for the full license terms.
*/
* @version 1.0
*/
public interface IEntityPersistenceService<T> {
-
+
/**
* <p>create</p>
*
* @param entity a {@link java.lang.Object} object.
* @return a boolean.
*/
- boolean create(T entity);
-
+ T create(T entity);
+
/**
* <p>save</p>
*
* @param entity a {@link java.lang.Object} object.
* @return a boolean.
*/
- boolean save(T entity);
-
+ T save(T entity);
+
/**
* <p>merge</p>
*
* @return a boolean.
*/
boolean merge(T entity, T mergeTarget);
-
+
/**
* <p>delete</p>
*
* @param entity a {@link java.lang.Object} object.
* @return a boolean.
- * @throws ReferencedObjectUndeletableException
+ * @throws ReferencedObjectUndeletableException
*/
boolean delete(T entity) throws ReferencedObjectUndeletableException;
}
// $Id$
/**
* Copyright (C) 2007 EDIT
-* European Distributed Institute of Taxonomy
+* European Distributed Institute of Taxonomy
* http://www.e-taxonomy.eu
-*
+*
* The contents of this file are subject to the Mozilla Public License Version 1.1
* See LICENSE.TXT at the top of this package for the full license terms.
*/
/** Constant <code>TYPE_GENERIC="Annotation.TYPE_UNKNOWN"</code> */
public static final String TYPE_GENERIC = Annotation.TYPE_UNKNOWN;
-
+
private T entity;
private ILineDisplayStrategy lineDisplayStrategy;
private boolean markedAsNew;
private T mergeTarget;
-
+
/**
* <p>Constructor for LineAnnotation.</p>
*
this.lineDisplayStrategy = lineDisplayStrategy;
setType(TYPE_GENERIC);
}
-
+
/* (non-Javadoc)
* @see org.eclipse.jface.text.source.Annotation#getText()
*/
public String getText() {
return getEditableText();
}
-
+
/* (non-Javadoc)
* @see org.eclipse.jface.text.source.Annotation#setText(java.lang.String)
*/
@Override
public void setText(String text) {
lineDisplayStrategy.setText(text, entity);
- dirty = true;
+ dirty = true;
super.setText(text);
}
-
+
/** {@inheritDoc} */
@Override
public String toString() {
// For debugging
return getText();
}
-
+
/* (non-Javadoc)
* @see eu.etaxonomy.taxeditor.bulkeditor.IEntityContainer#getAttachedEntities()
*/
*
* @return a {@link java.util.Set} object.
*/
- public Set getAttachedEntities() {
+ @Override
+ public Set getAttachedEntities() {
// TODO Auto-generated method stub
return null;
}
*
* @return a T object.
*/
- public T getEntity() {
+ @Override
+ public T getEntity() {
return entity;
}
*
* @return a {@link java.lang.String} object.
*/
- public String getEditableText() {
+ @Override
+ public String getEditableText() {
return lineDisplayStrategy.getText(entity);
}
*
* @return a T object.
*/
- public T getMergeTarget() {
+ @Override
+ public T getMergeTarget() {
return mergeTarget;
}
*
* @return a boolean.
*/
- public boolean isMarkedAsDeleted() {
+ @Override
+ public boolean isMarkedAsDeleted() {
return super.isMarkedDeleted();
}
*
* @return a boolean.
*/
- public boolean isMarkedAsMerged() {
+ @Override
+ public boolean isMarkedAsMerged() {
return markedAsMerged;
}
*
* @return a boolean.
*/
- public boolean isMarkedAsNew() {
+ @Override
+ public boolean isMarkedAsNew() {
return markedAsNew;
}
/**
* <p>markAsDeleted</p>
*/
- public void markAsDeleted() {
+ @Override
+ public void markAsDeleted() {
super.markDeleted(true);
if (!isMarkedAsMerged()) {
lineDisplayStrategy.setStatusMessage(entity + " deleted.", entity);
*
* @param mergeTarget a T object.
*/
- public void markAsMerged(T mergeTarget) {
+ @Override
+ public void markAsMerged(T mergeTarget) {
this.mergeTarget = mergeTarget;
markedAsMerged = true;
lineDisplayStrategy.setStatusMessage("'" + entity + "' merged into '" + mergeTarget + "'.", entity);
* @see eu.etaxonomy.taxeditor.bulkeditor.IEntityContainer#markAsNew()
*/
/** {@inheritDoc} */
- public void markAsNew(boolean isNew) {
+ @Override
+ public void markAsNew(boolean isNew) {
markedAsNew = isNew;
lineDisplayStrategy.setStatusMessage("New entity created.", entity);
}
* @see eu.etaxonomy.taxeditor.bulkeditor.IEntityContainer#setDirty(boolean)
*/
/** {@inheritDoc} */
- public void setDirty(boolean dirty) {
+ @Override
+ public void setDirty(boolean dirty) {
this.dirty = dirty;
}
*
* @return a boolean.
*/
- public boolean isDirty() {
+ @Override
+ public boolean isDirty() {
return dirty;
}
public String getHoverText() {
return lineDisplayStrategy.getHoverText(entity);
}
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.annotatedlineeditor.IEntityContainer#setEntity(java.lang.Object)
+ */
+ @Override
+ public void setEntity(Object entity) {
+ this.entity = (T) entity;
+ }
}
displayWarningDialog();
isInitialFocus = false;
}
+ super.setFocus();
}
private void displayWarningDialog() {
import java.util.ArrayList;
import java.util.List;
-import java.util.Map;
import org.apache.commons.lang.StringUtils;
import org.eclipse.jface.action.IStatusLineManager;
import eu.etaxonomy.cdm.model.common.IAnnotatableEntity;
import eu.etaxonomy.cdm.model.common.ICdmBase;
import eu.etaxonomy.cdm.model.common.Marker;
-import eu.etaxonomy.cdm.model.common.MarkerType;
import eu.etaxonomy.cdm.model.name.TaxonNameBase;
import eu.etaxonomy.cdm.model.reference.Reference;
import eu.etaxonomy.taxeditor.annotatedlineeditor.EntityListener;
import eu.etaxonomy.taxeditor.annotatedlineeditor.ILineDisplayStrategy;
import eu.etaxonomy.taxeditor.bulkeditor.input.AbstractBulkEditorInput;
-import eu.etaxonomy.taxeditor.preference.PreferencesUtil;
/**
* <p>BulkEditorLineDisplay class.</p>
if (entity instanceof IAnnotatableEntity) {
IAnnotatableEntity annotatableEntity = (IAnnotatableEntity) HibernateProxyHelper.deproxy(entity);
- Map<MarkerType, Boolean> editMarkerTypePreferences = PreferencesUtil.getEditMarkerTypePreferences();
-
String markerText = "";
List<String> markers = new ArrayList<String>();
for (Marker marker : annotatableEntity.getMarkers()) {
// $Id$
/**
* Copyright (C) 2007 EDIT
-* European Distributed Institute of Taxonomy
+* European Distributed Institute of Taxonomy
* http://www.e-taxonomy.eu
-*
+*
* The contents of this file are subject to the Mozilla Public License Version 1.1
* See LICENSE.TXT at the top of this package for the full license terms.
*/
package eu.etaxonomy.taxeditor.bulkeditor.handler;
-import java.util.Iterator;
-import java.util.Set;
-import java.util.UUID;
-
import org.eclipse.core.commands.AbstractHandler;
import org.eclipse.core.commands.ExecutionEvent;
import org.eclipse.core.commands.ExecutionException;
-import org.eclipse.jface.dialogs.MessageDialog;
import org.eclipse.jface.viewers.ISelection;
import org.eclipse.jface.viewers.IStructuredSelection;
import org.eclipse.ui.IEditorInput;
import org.eclipse.ui.IEditorPart;
-import org.eclipse.ui.IViewPart;
-import org.eclipse.ui.IViewReference;
-import org.eclipse.ui.PlatformUI;
import org.eclipse.ui.handlers.HandlerUtil;
import org.eclipse.ui.texteditor.IDocumentProvider;
-import org.eclipse.ui.IWorkbenchPage;
+import eu.etaxonomy.cdm.api.application.ICdmApplicationConfiguration;
import eu.etaxonomy.cdm.api.service.DeleteResult;
import eu.etaxonomy.cdm.api.service.IAgentService;
import eu.etaxonomy.cdm.api.service.IGroupService;
import eu.etaxonomy.cdm.api.service.ITaxonService;
import eu.etaxonomy.cdm.api.service.IUserService;
import eu.etaxonomy.cdm.api.service.config.NameDeletionConfigurator;
-import eu.etaxonomy.cdm.hibernate.HibernateProxyHelper;
import eu.etaxonomy.cdm.model.agent.TeamOrPersonBase;
-import eu.etaxonomy.cdm.model.common.CdmBase;
import eu.etaxonomy.cdm.model.common.Group;
-import eu.etaxonomy.cdm.model.common.IdentifiableEntity;
import eu.etaxonomy.cdm.model.common.User;
import eu.etaxonomy.cdm.model.name.TaxonNameBase;
import eu.etaxonomy.cdm.model.occurrence.SpecimenOrObservationBase;
import eu.etaxonomy.cdm.model.taxon.Synonym;
import eu.etaxonomy.cdm.model.taxon.Taxon;
import eu.etaxonomy.cdm.model.taxon.TaxonBase;
-import eu.etaxonomy.cdm.persistence.dao.hibernate.HibernateBeanInitializer;
-import eu.etaxonomy.cdm.api.application.ICdmApplicationConfiguration;
import eu.etaxonomy.taxeditor.annotatedlineeditor.IEntityPersistenceService;
import eu.etaxonomy.taxeditor.annotatedlineeditor.LineAnnotation;
import eu.etaxonomy.taxeditor.annotatedlineeditor.LineAnnotationModel;
import eu.etaxonomy.taxeditor.bulkeditor.BulkEditor;
import eu.etaxonomy.taxeditor.bulkeditor.internal.TaxeditorBulkeditorPlugin;
-import eu.etaxonomy.taxeditor.bulkeditor.referencingobjects.ReferencingObjectsView;
import eu.etaxonomy.taxeditor.model.MessagingUtils;
-import eu.etaxonomy.taxeditor.preference.IPreferenceKeys;
-import eu.etaxonomy.taxeditor.preference.PreferencesUtil;
import eu.etaxonomy.taxeditor.store.CdmStore;
*/
@Override
public Object execute(ExecutionEvent event) throws ExecutionException {
-
+
ISelection selection = HandlerUtil.getCurrentSelection(event);
-
+
IEditorPart editor = HandlerUtil.getActiveEditor(event);
-
+
IEditorInput input = editor.getEditorInput();
-
+
if((input instanceof IEntityPersistenceService) && (selection instanceof IStructuredSelection)){
-
-
+
+
IDocumentProvider provider = ((BulkEditor) editor).getDocumentProvider();
- LineAnnotationModel model =
+ LineAnnotationModel model =
(LineAnnotationModel) provider.getAnnotationModel(input);
-
-
+
+
IStructuredSelection structuredSelection = (IStructuredSelection) selection;
-
+
IEntityPersistenceService persistenceService = (IEntityPersistenceService) input;
-
-
+
+
for(Object object : structuredSelection.toList()){
-
+
LineAnnotation annotation = (LineAnnotation) model.getAnnotation(object);
- DeleteResult result = new DeleteResult();
+ DeleteResult result = new DeleteResult();
//result.setError();
try {
ICdmApplicationConfiguration controller;
- controller = (ICdmApplicationConfiguration) CdmStore.getCurrentApplicationConfiguration();
- //persistenceService.delete(object);
+ controller = CdmStore.getCurrentApplicationConfiguration();
+
if (object instanceof SpecimenOrObservationBase){
-
IOccurrenceService service = controller.getOccurrenceService();
- SpecimenOrObservationBase persistedObject = service.load(((SpecimenOrObservationBase) object).getUuid());
- if (persistedObject != null){
- result = service.delete(persistedObject);
- }
+ if (object != null){
+ result = service.delete(((SpecimenOrObservationBase) object).getUuid());
+ }
} else if (object instanceof Reference){
IReferenceService service = controller.getReferenceService();
-
- Reference persistedObject = service.load(((Reference) object).getUuid());
- if (persistedObject != null){
- result = service.delete(persistedObject);
+ if (object != null){
+ result = service.delete(((Reference) object).getUuid());
}
-
+
} else if (object instanceof Group){
IGroupService service = controller.getGroupService();
- Group persistedObject = service.load(((Group) object).getUuid());
- if (persistedObject != null){
- result = service.delete(persistedObject);
+ if (object != null){
+ result = service.delete(((Group) object).getUuid());
}
}else if (object instanceof User){
IUserService service = controller.getUserService();
- User persistedObject = service.load(((User) object).getUuid());
- if (persistedObject != null){
- result = service.delete(persistedObject);
+ if (object != null){
+ result = service.delete(((User) object).getUuid());
}
} else if (object instanceof TaxonNameBase){
INameService service = controller.getNameService();
- TaxonNameBase name = service.load(((TaxonNameBase) object).getUuid());
- if (name != null){
+ if (object != null){
NameDeletionConfigurator config = new NameDeletionConfigurator();
-
- result = service.delete(name.getUuid(), config);
- }
+ result = service.delete(((TaxonNameBase) object).getUuid(), config);
+ }
} else if (object instanceof TaxonBase){
ITaxonService service = controller.getTaxonService();
- TaxonBase taxonBase = service.load(((TaxonBase) object).getUuid());
- if (taxonBase != null){
+ if (object != null){
if (object instanceof Taxon){
result = service.deleteTaxon(((TaxonBase) object).getUuid(), null, null);
}else{
- result = service.deleteSynonym((Synonym)object, null);
+ result = service.deleteSynonym(((Synonym)object).getUuid(), null);
}
}
} else if (object instanceof TeamOrPersonBase){
IAgentService service = controller.getAgentService();
- TeamOrPersonBase teamOrPerson = (TeamOrPersonBase)service.load(((TeamOrPersonBase) object).getUuid());
- result = service.delete((TeamOrPersonBase)object);
+ //TeamOrPersonBase teamOrPerson = (TeamOrPersonBase)service.load(((TeamOrPersonBase) object).getUuid());
+ result = service.delete(((TeamOrPersonBase)object).getUuid());
}
} catch (Exception e){
MessagingUtils.errorDialog("Exception occured. Delete not possible", getClass(), e.getMessage(), TaxeditorBulkeditorPlugin.PLUGIN_ID, null, true);
message+= ", ";
}
}
-
-
+
+
MessagingUtils.messageDialog("Delete not possible", getClass(), result.getExceptions().toString(), null);
}else{
MessagingUtils.messageDialog("Delete not possible", getClass(), "The object could not be deleted. An exception occured.", null);
-
}
}
if (result.isOk() ){
}
}
-
- }
+
+ }
}
-
-
+
+
return null;
}
import java.util.Collections;
import java.util.Comparator;
import java.util.List;
+import java.util.Map;
import java.util.UUID;
import org.eclipse.jface.resource.ImageDescriptor;
import eu.etaxonomy.taxeditor.bulkeditor.input.sortprovider.CdmBaseSortProvider;
import eu.etaxonomy.taxeditor.bulkeditor.input.sortprovider.TitleCacheComparator;
import eu.etaxonomy.taxeditor.bulkeditor.internal.TaxeditorBulkeditorPlugin;
+import eu.etaxonomy.taxeditor.editor.CdmEntitySessionInput;
import eu.etaxonomy.taxeditor.model.MessagingUtils;
import eu.etaxonomy.taxeditor.store.CdmStore;
* @version 1.0
* @param <T>
*/
-public abstract class AbstractBulkEditorInput<T extends ICdmBase> implements IEditorInput, IEntityPersistenceService<T> {
+public abstract class AbstractBulkEditorInput<T extends ICdmBase> extends CdmEntitySessionInput implements IEditorInput ,
+ IEntityPersistenceService<T> {
private UUID entityUuid;
private static Class serviceClass;
+ public AbstractBulkEditorInput() {
+ super(true);
+ }
+
/**
* <p>NewInstance</p>
*
/** {@inheritDoc} */
@Override
- public boolean create(T entity) {
+ public T create(T entity) {
return save(entity);
}
/**
* @return
*/
- public List<?> getModel() {
+ public List<T> getModel() {
return model;
}
+ protected boolean replaceInModel(T entity) {
+ int index = model.indexOf(entity);
+ if(index >= 0) {
+ model.set(index, entity);
+ return true;
+ } else {
+ return false;
+ }
+ }
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled#getRootEntities()
+ */
+ @Override
+ public List<T> getRootEntities() {
+ return getModel();
+ }
+
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled#getPropertyPathsMap()
+ */
+ @Override
+ public Map<Object, List<String>> getPropertyPathsMap() {
+ // TODO Auto-generated method stub
+ return null;
+ }
}
return ID;
}
+
@Override
public String getName() {
return BulkEditorInputType.AGENT.label;
}
+
@Override
public String getToolTipText() {
return getName();
return true;
}
+
/** {@inheritDoc} */
@Override
public boolean isConvertingEnabled() {
public boolean delete(AgentBase entity) throws ReferencedObjectUndeletableException {
-
return CdmStore.getService(IAgentService.class).delete(entity) != null;
}
return sortProviders;
}
+
@Override
protected IEntityCreator<TeamOrPersonBase> createEntityCreator() {
return new AgentCreator();
}
@Override
- public boolean save(TeamOrPersonBase entity) {
- return CdmStore.getService(IAgentService.class).saveOrUpdate(entity) != null;
+ public TeamOrPersonBase save(TeamOrPersonBase entity) {
+ if(CdmStore.getCurrentSessionManager().isRemoting()) {
+ return (TeamOrPersonBase) CdmStore.getService(IAgentService.class).merge(entity);
+ } else {
+ CdmStore.getService(IAgentService.class).saveOrUpdate(entity) ;
+ return entity;
+ }
}
@Override
return false;
}
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.editor.CdmEntitySessionInput#merge()
+ */
+ @Override
+ public void merge() {
+
+ }
+
+
}
// $Id$
/**
* Copyright (C) 2007 EDIT
-* European Distributed Institute of Taxonomy
+* European Distributed Institute of Taxonomy
* http://www.e-taxonomy.eu
-*
+*
* The contents of this file are subject to the Mozilla Public License Version 1.1
* See LICENSE.TXT at the top of this package for the full license terms.
*/
package eu.etaxonomy.taxeditor.bulkeditor.input;
-import java.util.Arrays;
import java.util.List;
-import java.util.UUID;
import eu.etaxonomy.cdm.api.service.IGroupService;
import eu.etaxonomy.cdm.api.service.config.IIdentifiableEntityServiceConfigurator;
public class GroupEditorInput extends AbstractBulkEditorInput<Group> {
public static final String ID = "bulkeditor.input.group";
-
+
private static GroupEditorInput instance;
-
+
/**
* @return the instance
*/
}
return instance;
}
-
+
/* (non-Javadoc)
* @see org.eclipse.ui.IEditorInput#getName()
*/
* @see eu.etaxonomy.taxeditor.annotatedlineeditor.IEntityPersistenceService#save(java.lang.Object)
*/
@Override
- public boolean save(Group entity) {
- return CdmStore.getService(IGroupService.class).saveOrUpdate(entity) != null;
+ public Group save(Group entity) {
+ if(CdmStore.getCurrentSessionManager().isRemoting()) {
+ return CdmStore.getService(IGroupService.class).merge(entity) ;
+ } else {
+ CdmStore.getService(IGroupService.class).saveOrUpdate(entity);
+ return entity;
+ }
}
/* (non-Javadoc)
/* (non-Javadoc)
* @see eu.etaxonomy.taxeditor.bulkeditor.input.AbstractBulkEditorInput#loadEntity(java.util.UUID)
-
+
@Override
protected Group loadEntity(UUID entityUuid) {
- List<String> propertyPaths = Arrays.asList(new String[]{});
+ List<String> propertyPaths = Arrays.asList(new String[]{});
return CdmStore.getService(IGroupService.class).load(entityUuid, propertyPaths);
}
*/
protected IEntityCreator<Group> createEntityCreator() {
return new GroupCreator();
}
-
+
/* (non-Javadoc)
* @see eu.etaxonomy.taxeditor.bulkeditor.input.AbstractBulkEditorInput#getText(eu.etaxonomy.cdm.model.common.ICdmBase)
*/
return entity.getName();
}
-
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.editor.CdmEntitySessionInput#merge()
+ */
+ @Override
+ public void merge() {
+
+ }
+
+
}
// $Id$
/**
* Copyright (C) 2007 EDIT
-* European Distributed Institute of Taxonomy
+* European Distributed Institute of Taxonomy
* http://www.e-taxonomy.eu
-*
+*
* The contents of this file are subject to the Mozilla Public License Version 1.1
* See LICENSE.TXT at the top of this package for the full license terms.
*/
package eu.etaxonomy.taxeditor.bulkeditor.input;
-import java.util.Arrays;
import java.util.List;
-import java.util.UUID;
import eu.etaxonomy.cdm.api.service.INameService;
import eu.etaxonomy.cdm.api.service.config.IIdentifiableEntityServiceConfigurator;
-import eu.etaxonomy.cdm.api.service.exception.ReferencedObjectUndeletableException;
import eu.etaxonomy.cdm.model.name.TaxonNameBase;
import eu.etaxonomy.taxeditor.annotatedlineeditor.IEntityCreator;
import eu.etaxonomy.taxeditor.bulkeditor.IBulkEditorSortProvider;
public class NameEditorInput extends AbstractBulkEditorInput<TaxonNameBase> {
/**
- *
+ *
*/
private static final long serialVersionUID = -3085029575759626823L;
private static NameEditorInput instance;
/** Constant <code>ID="bulkeditor.input.name"</code> */
public static final String ID = "bulkeditor.input.name";
-
+
/**
* <p>Getter for the field <code>instance</code>.</p>
*
}
return instance;
}
-
+
/* (non-Javadoc)
* @see org.eclipse.ui.IEditorInput#getName()
*/
*
* @return a {@link java.lang.String} object.
*/
- public String getName() {
+ @Override
+ public String getName() {
return BulkEditorInputType.NAME.label;
}
*
* @return a {@link java.lang.String} object.
*/
- public String getToolTipText() {
+ @Override
+ public String getToolTipText() {
return getName();
}
return CdmStore.getSearchManager().findNames(configurator);
}
- /** {@inheritDoc}
+ /** {@inheritDoc}
@Override
public TaxonNameBase loadEntity(UUID uuid) {
- List<String> propertyPaths = Arrays.asList(new String[]{});
+ List<String> propertyPaths = Arrays.asList(new String[]{});
return CdmStore.getService(INameService.class).load(uuid, propertyPaths);
}
*/
- /** {@inheritDoc}
+ /** {@inheritDoc}
**/
- public boolean delete(TaxonNameBase entity) {
+ @Override
+ public boolean delete(TaxonNameBase entity) {
return CdmStore.getService(INameService.class).delete(entity) != null;
}
/** {@inheritDoc} */
- public boolean save(TaxonNameBase entity) {
- return CdmStore.getService(INameService.class).saveOrUpdate(entity) != null;
+ @Override
+ public TaxonNameBase save(TaxonNameBase entity) {
+ if(CdmStore.getCurrentSessionManager().isRemoting()) {
+ return CdmStore.getService(INameService.class).merge(entity) ;
+ } else {
+ CdmStore.getService(INameService.class).saveOrUpdate(entity);
+ return entity;
+ }
}
/* (non-Javadoc)
@Override
public List<IBulkEditorSortProvider<TaxonNameBase>> getSortProviders() {
List<IBulkEditorSortProvider<TaxonNameBase>> sortProviders = super.getSortProviders();
-
+
sortProviders.add(0, new IdentifiableEntitySortProvider<TaxonNameBase>());
-
+
return sortProviders;
}
-
+
/* (non-Javadoc)
* @see eu.etaxonomy.taxeditor.bulkeditor.input.AbstractBulkEditorInput#getTypeText(java.lang.Object)
*/
}
return super.getTypeText(entity);
}
-
+
/* (non-Javadoc)
* @see eu.etaxonomy.taxeditor.bulkeditor.input.AbstractBulkEditorInput#getText(eu.etaxonomy.cdm.model.common.ICdmBase)
*/
return (entity).getFullTitleCache();
}
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.editor.CdmEntitySessionInput#merge()
+ */
+ @Override
+ public void merge() {
+
+ }
+
}
// $Id$
/**
* Copyright (C) 2007 EDIT
-* European Distributed Institute of Taxonomy
+* European Distributed Institute of Taxonomy
* http://www.e-taxonomy.eu
-*
+*
* The contents of this file are subject to the Mozilla Public License Version 1.1
* See LICENSE.TXT at the top of this package for the full license terms.
*/
public class NameRelationshipEditorInput extends AbstractBulkEditorInput<NameRelationship> {
/**
- *
+ *
*/
private static final long serialVersionUID = -7453923697752787687L;
}
return instance;
}
-
+
/* (non-Javadoc)
* @see org.eclipse.ui.IEditorInput#getName()
*/
*/
/** {@inheritDoc} */
@Override
- public boolean save(NameRelationship entity) {
+ public NameRelationship save(NameRelationship entity) {
// TODO Auto-generated method stub
- return false;
+ return null;
}
/* (non-Javadoc)
/** {@inheritDoc} */
@Override
protected NameRelationship loadEntity(UUID entityUuid) {
- List<String> propertyPaths = Arrays.asList(new String[]{});
+ List<String> propertyPaths = Arrays.asList(new String[]{});
return null; // CdmStore.getNameService().load(entityUuid, propertyPaths);
}
MessagingUtils.notImplementedMessage(getClass());
return null;
}
-
+
/* (non-Javadoc)
* @see eu.etaxonomy.taxeditor.bulkeditor.input.AbstractBulkEditorInput#getTypeText(java.lang.Object)
*/
if(entity instanceof NameRelationship){
return ((NameRelationship) entity).getType().getTitleCache();
}
-
+
return super.getTypeText(entity);
}
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.editor.CdmEntitySessionInput#merge()
+ */
+ @Override
+ public void merge() {
+
+ }
+
}
package eu.etaxonomy.taxeditor.bulkeditor.input;
-import java.util.Arrays;
import java.util.List;
-import java.util.UUID;
import eu.etaxonomy.cdm.api.service.IOccurrenceService;
import eu.etaxonomy.cdm.api.service.config.IIdentifiableEntityServiceConfigurator;
import eu.etaxonomy.cdm.api.service.exception.ReferencedObjectUndeletableException;
import eu.etaxonomy.cdm.hibernate.HibernateProxyHelper;
import eu.etaxonomy.cdm.model.occurrence.SpecimenOrObservationBase;
+import eu.etaxonomy.cdm.strategy.cache.common.IIdentifiableEntityCacheStrategy;
import eu.etaxonomy.taxeditor.annotatedlineeditor.IEntityCreator;
import eu.etaxonomy.taxeditor.bulkeditor.IBulkEditorSortProvider;
import eu.etaxonomy.taxeditor.bulkeditor.input.entitycreator.OccurrenceCreator;
/* (non-Javadoc)
* @see eu.etaxonomy.taxeditor.bulkeditor.input.AbstractBulkEditorInput#loadEntity(java.util.UUID)
*/
- /** {@inheritDoc}
+ /** {@inheritDoc}
@Override
protected SpecimenOrObservationBase loadEntity(UUID entityUuid) {
List<String> propertyPaths = Arrays.asList(new String[]{});
/* (non-Javadoc)
* @see eu.etaxonomy.taxeditor.annotatedlineeditor.IEntityPersistenceService#delete(java.lang.Object)
*/
- /** {@inheritDoc}
+ /** {@inheritDoc}
* @throws ReferencedObjectUndeletableException */
@Override
public boolean delete(SpecimenOrObservationBase entity) throws ReferencedObjectUndeletableException {
*/
/** {@inheritDoc} */
@Override
- public boolean save(SpecimenOrObservationBase entity) {
- return CdmStore.getService(IOccurrenceService.class).save(entity) != null;
+ public SpecimenOrObservationBase<IIdentifiableEntityCacheStrategy> save(SpecimenOrObservationBase entity) {
+ if(CdmStore.getCurrentSessionManager().isRemoting()) {
+ return CdmStore.getService(IOccurrenceService.class).merge(entity) ;
+ } else {
+ CdmStore.getService(IOccurrenceService.class).save(entity);
+ return entity;
+ }
}
return sortProviders;
}
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.editor.CdmEntitySessionInput#merge()
+ */
+ @Override
+ public void merge() {
+
+ }
}
// $Id$
/**
* Copyright (C) 2007 EDIT
-* European Distributed Institute of Taxonomy
+* European Distributed Institute of Taxonomy
* http://www.e-taxonomy.eu
-*
+*
* The contents of this file are subject to the Mozilla Public License Version 1.1
* See LICENSE.TXT at the top of this package for the full license terms.
*/
public class ReferenceEditorInput extends AbstractBulkEditorInput<Reference> {
/**
- *
+ *
*/
private static final long serialVersionUID = 3806243517765126749L;
/** Constant <code>ID="bulkeditor.input.reference"</code> */
public static final String ID = "bulkeditor.input.reference";
-
+
private static ReferenceEditorInput instance;
/**
public static String getID() {
return ID;
}
-
+
/* (non-Javadoc)
* @see org.eclipse.ui.IEditorInput#getName()
*/
*
* @return a {@link java.lang.String} object.
*/
- public String getName() {
+ @Override
+ public String getName() {
return BulkEditorInputType.REFERENCE.label;
}
*
* @return a {@link java.lang.String} object.
*/
- public String getToolTipText() {
+ @Override
+ public String getToolTipText() {
return getName();
}
public boolean isMergingEnabled() {
return true;
}
-
+
/* (non-Javadoc)
* @see eu.etaxonomy.taxeditor.bulkeditor.input.BulkEditorInput#isMarkerTypeEditingEnabled(eu.etaxonomy.cdm.model.common.MarkerType)
*/
return super.isMarkerTypeEditingEnabled(markerType);
}
-
+
/** {@inheritDoc} */
@Override
public List listEntities(IIdentifiableEntityServiceConfigurator configurator) {
return CdmStore.getSearchManager().findReferences(configurator);
}
-
+
// Entity persistence
-
+
/** {@inheritDoc} */
@Override
public Reference loadEntity(UUID entityUuid) {
- List<String> propertyPaths = Arrays.asList(new String[]{"*", "inReference.*", "authorTeam.*"});
+ List<String> propertyPaths = Arrays.asList(new String[]{"*", "inReference.*", "authorTeam.*"});
return CdmStore.getService(IReferenceService.class).load(entityUuid, propertyPaths);
}
- /** {@inheritDoc}
+ /** {@inheritDoc}
* @throws ReferencedObjectUndeletableException */
- public boolean delete(Reference entity) throws ReferencedObjectUndeletableException {
+ @Override
+ public boolean delete(Reference entity) throws ReferencedObjectUndeletableException {
return CdmStore.getService(IReferenceService.class).delete(entity) != null;
}
/** {@inheritDoc} */
- public boolean save(Reference entity) {
- return CdmStore.getService(IReferenceService.class).saveOrUpdate(entity) != null;
+ @Override
+ public Reference save(Reference entity) {
+ if(CdmStore.getCurrentSessionManager().isRemoting()) {
+ return CdmStore.getService(IReferenceService.class).merge(entity);
+ } else {
+ CdmStore.getService(IReferenceService.class).saveOrUpdate(entity);
+ return entity;
+ }
}
/* (non-Javadoc)
protected IEntityCreator<Reference> createEntityCreator() {
return new ReferenceCreator();
}
-
+
/* (non-Javadoc)
* @see eu.etaxonomy.taxeditor.bulkeditor.input.AbstractBulkEditorInput#getSortProviders()
*/
@Override
public List<IBulkEditorSortProvider<Reference>> getSortProviders() {
List<IBulkEditorSortProvider<Reference>> sortProviders = super.getSortProviders();
-
+
sortProviders.add(0, new IdentifiableEntitySortProvider<Reference>());
sortProviders.add(1, new ReferenceSortProvider());
-
+
return sortProviders;
}
-
+
/* (non-Javadoc)
* @see eu.etaxonomy.taxeditor.bulkeditor.input.AbstractBulkEditorInput#getTypeText(java.lang.Object)
*/
return super.getTypeText(entity);
}
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.editor.CdmEntitySessionInput#merge()
+ */
+ @Override
+ public void merge() {
+
+ }
+
}
import java.util.List;\r
import java.util.UUID;\r
\r
-import eu.etaxonomy.cdm.api.service.INameService;\r
import eu.etaxonomy.cdm.api.service.ITaxonService;\r
import eu.etaxonomy.cdm.api.service.config.FindTaxaAndNamesConfiguratorImpl;\r
import eu.etaxonomy.cdm.api.service.config.IFindTaxaAndNamesConfigurator;\r
import eu.etaxonomy.cdm.api.service.config.IIdentifiableEntityServiceConfigurator;\r
import eu.etaxonomy.cdm.api.service.exception.ReferencedObjectUndeletableException;\r
import eu.etaxonomy.cdm.hibernate.HibernateProxyHelper;\r
-import eu.etaxonomy.cdm.model.name.TaxonNameBase;\r
import eu.etaxonomy.cdm.model.taxon.Synonym;\r
import eu.etaxonomy.cdm.model.taxon.Taxon;\r
import eu.etaxonomy.cdm.model.taxon.TaxonBase;\r
import eu.etaxonomy.cdm.persistence.query.MatchMode;\r
import eu.etaxonomy.taxeditor.annotatedlineeditor.IEntityCreator;\r
-import eu.etaxonomy.taxeditor.bulkeditor.input.entitycreator.NameCreator;\r
import eu.etaxonomy.taxeditor.bulkeditor.input.entitycreator.TaxonCreator;\r
import eu.etaxonomy.taxeditor.store.CdmStore;\r
\r
private static TaxonEditorInput instance;\r
/** Constant <code>ID="bulkeditor.input.taxon"</code> */\r
public static final String ID = "bulkeditor.input.taxon";\r
- \r
- \r
- \r
+\r
+\r
+\r
/**\r
* <p>Getter for the field <code>instance</code>.</p>\r
*\r
if (instance == null) {\r
instance = new TaxonEditorInput();\r
}\r
- \r
+\r
return instance;\r
}\r
- \r
- \r
+\r
+\r
@Override\r
public String getName() {\r
return BulkEditorInputType.TAXON.label;\r
return getName();\r
}\r
\r
- \r
+\r
/**\r
* <p>getID</p>\r
*\r
public static Object getID() {\r
return ID;\r
}\r
- \r
+\r
/* (non-Javadoc)\r
* @see eu.etaxonomy.taxeditor.bulkeditor.input.BulkEditorInput#isMergingEnabled()\r
*/\r
return false;\r
}\r
@Override\r
- public boolean save(TaxonBase entity) {\r
- return CdmStore.getService(ITaxonService.class).saveOrUpdate(entity) != null;\r
+ public TaxonBase save(TaxonBase entity) {\r
+ if(CdmStore.getCurrentSessionManager().isRemoting()) {\r
+ return CdmStore.getService(ITaxonService.class).merge(entity);\r
+ } else {\r
+ CdmStore.getService(ITaxonService.class).saveOrUpdate(entity);\r
+ return entity;\r
+ }\r
}\r
\r
- \r
+\r
\r
/** {@inheritDoc} */\r
@Override\r
List<TaxonBase> taxa = CdmStore.getSearchManager().findTaxa(configurator);\r
List<TaxonBase> taxaCopy = new ArrayList<TaxonBase>();\r
for (TaxonBase taxon:taxa){\r
- \r
+\r
if (taxon instanceof Taxon){\r
taxaCopy.add(HibernateProxyHelper.deproxy(taxon, Taxon.class));\r
}else{\r
\r
@Override\r
protected TaxonBase loadEntity(UUID entityUuid) {\r
- List<String> propertyPaths = Arrays.asList(new String[]{}); \r
+ List<String> propertyPaths = Arrays.asList(new String[]{});\r
return CdmStore.getService(ITaxonService.class).load(entityUuid, propertyPaths);\r
}\r
\r
- \r
\r
- /** {@inheritDoc} \r
+\r
+ /** {@inheritDoc}\r
* @throws ReferencedObjectUndeletableException */\r
- public boolean delete(TaxonBase entity) {\r
+ @Override\r
+ public boolean delete(TaxonBase entity) {\r
return CdmStore.getService(ITaxonService.class).delete(entity) != null;\r
}\r
@Override\r
return new TaxonCreator();\r
}\r
\r
+\r
+ /* (non-Javadoc)\r
+ * @see eu.etaxonomy.taxeditor.editor.CdmEntitySessionInput#merge()\r
+ */\r
+ @Override\r
+ public void merge() {\r
+\r
+ }\r
+\r
}\r
// $Id$
/**
* Copyright (C) 2007 EDIT
-* European Distributed Institute of Taxonomy
+* European Distributed Institute of Taxonomy
* http://www.e-taxonomy.eu
-*
+*
* The contents of this file are subject to the Mozilla Public License Version 1.1
* See LICENSE.TXT at the top of this package for the full license terms.
*/
package eu.etaxonomy.taxeditor.bulkeditor.input;
-import java.util.Arrays;
import java.util.List;
-import java.util.UUID;
import eu.etaxonomy.cdm.api.service.IUserService;
import eu.etaxonomy.cdm.api.service.config.IIdentifiableEntityServiceConfigurator;
public class UserEditorInput extends AbstractBulkEditorInput<User> {
public static final String ID = "bulkeditor.input.user";
-
+
private static UserEditorInput instance;
-
+
/**
* @return the instance
*/
}
return instance;
}
-
+
/* (non-Javadoc)
* @see org.eclipse.ui.IEditorInput#getName()
*/
* @see eu.etaxonomy.taxeditor.annotatedlineeditor.IEntityPersistenceService#save(java.lang.Object)
*/
@Override
- public boolean save(User entity) {
- return CdmStore.getService(IUserService.class).saveOrUpdate(entity) != null;
+ public User save(User entity) {
+ if(CdmStore.getCurrentSessionManager().isRemoting()) {
+ return CdmStore.getService(IUserService.class).merge(entity);
+ } else {
+ CdmStore.getService(IUserService.class).saveOrUpdate(entity);
+ return entity;
+ }
+
}
/* (non-Javadoc)
return CdmStore.getSearchManager().findUsers(configurator);
}
-
+
/* (non-Javadoc)
* @see eu.etaxonomy.taxeditor.bulkeditor.input.AbstractBulkEditorInput#loadEntity(java.util.UUID)
-
+
@Override
protected User loadEntity(UUID entityUuid) {
- List<String> propertyPaths = Arrays.asList(new String[]{});
+ List<String> propertyPaths = Arrays.asList(new String[]{});
return CdmStore.getService(IUserService.class).load(entityUuid, propertyPaths);
}
*/
protected IEntityCreator<User> createEntityCreator() {
return new UserCreator();
}
-
+
/* (non-Javadoc)
* @see eu.etaxonomy.taxeditor.bulkeditor.input.AbstractBulkEditorInput#getText(eu.etaxonomy.cdm.model.common.ICdmBase)
*/
return String.format("%s, %s", entity.getUsername(), entity.getPerson());
}
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.editor.CdmEntitySessionInput#merge()
+ */
+ @Override
+ public void merge() {
+
+ }
+
}
// $Id$
/**
* Copyright (C) 2007 EDIT
-* European Distributed Institute of Taxonomy
+* European Distributed Institute of Taxonomy
* http://www.e-taxonomy.eu
-*
+*
* The contents of this file are subject to the Mozilla Public License Version 1.1
* See LICENSE.TXT at the top of this package for the full license terms.
*/
public User createEntity(Object key, String text) {
try{
User user = User.NewInstance(text, text);
- CdmStore.getService(IUserService.class).createUser(user);
+ if(CdmStore.getCurrentSessionManager().isRemoting()) {
+ user = CdmStore.getService(IUserService.class).merge(user);
+ } else {
+ CdmStore.getService(IUserService.class).createUser(user);
+ }
return user;
} catch (AccessDeniedException e){
MessagingUtils.messageDialog("Access denied", getClass(), e.getMessage(), e);
* @created 08.07.2009
* @version 1.0
*/
-public class ReferencingObjectsView extends AbstractCdmViewPart{
+public class ReferencingObjectsView extends AbstractCdmViewPart {
private static final Logger logger = Logger
.getLogger(ReferencingObjectsView.class);
}
-
}
-<?xml version="1.0" encoding="UTF-8"?>\r
-<classpath>\r
- <classpathentry exported="true" kind="lib" path="lib/cdmlib-commons-3.8.0-SNAPSHOT.jar"/>\r
- <classpathentry exported="true" kind="lib" path="lib/cdmlib-ext-3.8.0-SNAPSHOT.jar"/>\r
- <classpathentry exported="true" kind="lib" path="lib/cdmlib-io-3.8.0-SNAPSHOT.jar"/>\r
- <classpathentry exported="true" kind="lib" path="lib/cdmlib-model-3.8.0-SNAPSHOT.jar"/>\r
- <classpathentry exported="true" kind="lib" path="lib/cdmlib-persistence-3.8.0-SNAPSHOT.jar"/>\r
- <classpathentry exported="true" kind="lib" path="lib/cdmlib-print-3.8.0-SNAPSHOT.jar"/>\r
- <classpathentry exported="true" kind="lib" path="lib/cdmlib-remote-3.8.0-SNAPSHOT.jar"/>\r
- <classpathentry exported="true" kind="lib" path="lib/cdmlib-services-3.8.0-SNAPSHOT.jar" sourcepath="lib/cdmlib-services-3.8.0-SNAPSHOT-sources.jar"/>\r
- <classpathentry kind="con" path="org.eclipse.jdt.launching.JRE_CONTAINER/org.eclipse.jdt.internal.debug.ui.launcher.StandardVMType/JavaSE-1.6"/>\r
- <classpathentry kind="con" path="org.eclipse.pde.core.requiredPlugins"/>\r
- <classpathentry kind="src" path="src/main/java"/>\r
- <classpathentry kind="src" path="src/main/resources"/>\r
- <classpathentry exported="true" kind="lib" path="lib/activation-1.1.1.jar"/>\r
- <classpathentry exported="true" kind="lib" path="lib/antlr-2.7.7.jar"/>\r
- <classpathentry exported="true" kind="lib" path="lib/aopalliance-1.0.jar"/>\r
- <classpathentry exported="true" kind="lib" path="lib/aspectjrt-1.7.1.jar"/>\r
- <classpathentry exported="true" kind="lib" path="lib/aspectjweaver-1.7.1.jar"/>\r
- <classpathentry exported="true" kind="lib" path="lib/avro-1.6.3.jar"/>\r
- <classpathentry exported="true" kind="lib" path="lib/batik-anim-1.7.jar"/>\r
- <classpathentry exported="true" kind="lib" path="lib/batik-awt-util-1.7.jar"/>\r
- <classpathentry exported="true" kind="lib" path="lib/batik-bridge-1.7.jar"/>\r
- <classpathentry exported="true" kind="lib" path="lib/batik-css-1.7.jar"/>\r
- <classpathentry exported="true" kind="lib" path="lib/batik-dom-1.7.jar"/>\r
- <classpathentry exported="true" kind="lib" path="lib/batik-ext-1.7.jar"/>\r
- <classpathentry exported="true" kind="lib" path="lib/batik-extension-1.7.jar"/>\r
- <classpathentry exported="true" kind="lib" path="lib/batik-gvt-1.7.jar"/>\r
- <classpathentry exported="true" kind="lib" path="lib/batik-js-1.7.jar"/>\r
- <classpathentry exported="true" kind="lib" path="lib/batik-parser-1.7.jar"/>\r
- <classpathentry exported="true" kind="lib" path="lib/batik-script-1.7.jar"/>\r
- <classpathentry exported="true" kind="lib" path="lib/batik-svg-dom-1.7.jar"/>\r
- <classpathentry exported="true" kind="lib" path="lib/batik-svggen-1.7.jar"/>\r
- <classpathentry exported="true" kind="lib" path="lib/batik-transcoder-1.7.jar"/>\r
- <classpathentry exported="true" kind="lib" path="lib/batik-util-1.7.jar"/>\r
- <classpathentry exported="true" kind="lib" path="lib/batik-xml-1.7.jar"/>\r
- <classpathentry exported="true" kind="lib" path="lib/c3p0-0.9.2.jar"/>\r
- <classpathentry exported="true" kind="lib" path="lib/cglib-nodep-2.2.2.jar"/>\r
- <classpathentry exported="true" kind="lib" path="lib/com.springsource.org.aopalliance-1.0.0.jar"/>\r
- <classpathentry exported="true" kind="lib" path="lib/com.springsource.org.apache.commons.logging-1.1.1.jar"/>\r
- <classpathentry exported="true" kind="lib" path="lib/commons-beanutils-1.8.3.jar"/>\r
- <classpathentry exported="true" kind="lib" path="lib/commons-codec-20041127.091804.jar"/>\r
- <classpathentry exported="true" kind="lib" path="lib/commons-collections-3.2.1.jar"/>\r
- <classpathentry exported="true" kind="lib" path="lib/commons-dbcp-1.4.jar"/>\r
- <classpathentry exported="true" kind="lib" path="lib/commons-io-2.4.jar"/>\r
- <classpathentry exported="true" kind="lib" path="lib/commons-lang-2.6.jar"/>\r
- <classpathentry exported="true" kind="lib" path="lib/commons-logging-1.1.2.jar"/>\r
- <classpathentry exported="true" kind="lib" path="lib/commons-pool-1.5.4.jar"/>\r
- <classpathentry exported="true" kind="lib" path="lib/concurrent-1.3.4.jar"/>\r
- <classpathentry exported="true" kind="lib" path="lib/dbunit-2.4.9.jar"/>\r
- <classpathentry exported="true" kind="lib" path="lib/dom4j-1.6.1.jar"/>\r
- <classpathentry exported="true" kind="lib" path="lib/doxia-core-1.3.jar"/>\r
- <classpathentry exported="true" kind="lib" path="lib/doxia-logging-api-1.3.jar"/>\r
- <classpathentry exported="true" kind="lib" path="lib/doxia-module-apt-1.3.jar"/>\r
- <classpathentry exported="true" kind="lib" path="lib/doxia-module-xhtml-1.3.jar"/>\r
- <classpathentry exported="true" kind="lib" path="lib/doxia-sink-api-1.3.jar"/>\r
- <classpathentry exported="true" kind="lib" path="lib/dozer-5.3.0.jar"/>\r
- <classpathentry exported="true" kind="lib" path="lib/easymock-3.1.jar"/>\r
- <classpathentry exported="true" kind="lib" path="lib/easymockclassextension-2.3.jar"/>\r
- <classpathentry exported="true" kind="lib" path="lib/ehcache-core-2.6.9.jar"/>\r
- <classpathentry exported="true" kind="lib" path="lib/ezmorph-1.0.6.jar"/>\r
- <classpathentry exported="true" kind="lib" path="lib/fop-1.1.jar"/>\r
- <classpathentry exported="true" kind="lib" path="lib/guava-r05.jar"/>\r
- <classpathentry exported="true" kind="lib" path="lib/h2-1.3.170.jar"/>\r
- <classpathentry exported="true" kind="lib" path="lib/hamcrest-core-1.3.jar"/>\r
- <classpathentry exported="true" kind="lib" path="lib/hibernate-c3p0-4.1.10.Final.jar"/>\r
- <classpathentry exported="true" kind="lib" path="lib/hibernate-cglib-repack-2.1_3.jar"/>\r
- <classpathentry exported="true" kind="lib" path="lib/hibernate-commons-annotations-4.0.1.Final.jar"/>\r
- <classpathentry exported="true" kind="lib" path="lib/hibernate-core-4.1.10.Final.jar"/>\r
- <classpathentry exported="true" kind="lib" path="lib/hibernate-ehcache-4.1.10.Final.jar"/>\r
- <classpathentry exported="true" kind="lib" path="lib/hibernate-entitymanager-4.1.10.Final.jar"/>\r
- <classpathentry exported="true" kind="lib" path="lib/hibernate-envers-4.1.10.Final.jar"/>\r
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+ <classpathentry kind="output" path="target/classes"/>
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-bin
\ No newline at end of file
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Bundle-ManifestVersion: 2
Bundle-Name: CDM Library Dependencies Plugin
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Import-Package: eu.etaxonomy.cdm.api.application
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- <outputDirectory>lib</outputDirectory>
- <overWriteReleases>true</overWriteReleases>
- <overWriteSnapshots>true</overWriteSnapshots>
- <excludeTransitive>true</excludeTransitive>
- <failOnMissingClassifierArtifact>false</failOnMissingClassifierArtifact>
- </configuration>
- </execution>
- </executions>
- </plugin>
- <plugin>
- <groupId>org.apache.maven.plugins</groupId>
- <artifactId>maven-antrun-plugin</artifactId>
- <version>1.7</version>
- <executions>
- <execution>
- <id>remove-existing-jars</id>
- <phase>clean</phase>
- <goals>
- <goal>run</goal>
- </goals>
- <configuration>
- <target>
- <echo>Remove all cdmlib jars</echo>
- <delete>
- <fileset dir="./lib" includes="cdmlib-*" />
- </delete>
- </target>
- </configuration>
- </execution>
- <execution>
- <id>update-snapshot-jar-names</id>
- <phase>validate</phase>
- <goals>
- <goal>run</goal>
- </goals>
- <configuration>
- <target>
- <echo>Update cdmlib jars to SNAPSHOT when build with timestamp</echo>
- <move todir="./lib">
- <fileset dir="./lib" />
- <mapper type="regexp" from="(^cdmlib\-.*\-[0-9]\.[0-9]\.[0-9]\-)[0-9.-]+(\.jar)" to="\1SNAPSHOT\2" />
- </move>
- <move todir="./lib">
- <fileset dir="./lib" />
- <mapper type="regexp" from="(^cdmlib\-.*\-[0-9]\.[0-9]\.[0-9]\-)[0-9.-]+(\-sources\.jar)" to="\1SNAPSHOT\2" />
- </move>
- </target>
- </configuration>
- </execution>
- </executions>
- </plugin>
- </plugins>
- </build>
- <dependencies>
- <dependency>
- <groupId>identificationKeyAPI</groupId>
- <artifactId>identificationKeyAPI</artifactId>
- <version>1.0-SNAPSHOT</version>
- </dependency>
- <dependency>
- <groupId>eu.etaxonomy</groupId>
- <artifactId>cdmlib-commons</artifactId>
- <version>${cdmlib.version}</version>
- </dependency>
- <dependency>
- <groupId>eu.etaxonomy</groupId>
- <artifactId>cdmlib-model</artifactId>
- <version>${cdmlib.version}</version>
- </dependency>
- <dependency>
- <groupId>eu.etaxonomy</groupId>
- <artifactId>cdmlib-persistence</artifactId>
- <version>${cdmlib.version}</version>
- </dependency>
- <dependency>
- <groupId>eu.etaxonomy</groupId>
- <artifactId>cdmlib-remote</artifactId>
- <version>${cdmlib.version}</version>
- </dependency>
- <dependency>
- <groupId>eu.etaxonomy</groupId>
- <artifactId>cdmlib-print</artifactId>
- <version>${cdmlib.version}</version>
- </dependency>
- <dependency>
- <groupId>eu.etaxonomy</groupId>
- <artifactId>cdmlib-services</artifactId>
- <version>${cdmlib.version}</version>
- </dependency>
- <dependency>
- <groupId>eu.etaxonomy</groupId>
- <artifactId>cdmlib-io</artifactId>
- <version>${cdmlib.version}</version>
- </dependency>
- <dependency>
- <groupId>eu.etaxonomy</groupId>
- <artifactId>cdmlib-ext</artifactId>
- <version>${cdmlib.version}</version>
- </dependency>
- <dependency>
- <groupId>org.aspectj</groupId>
- <artifactId>aspectjrt</artifactId>
- <version>1.7.1</version>
- </dependency>
- <dependency>
- <groupId>org.aspectj</groupId>
- <artifactId>aspectjweaver</artifactId>
- <version>1.7.1</version>
- </dependency>
-
- <!-- for ikey-plus
- TODO this should not be needed but the utils class contained in this jar
- seems to be loaded as bean by spring
- -->
- </dependencies>
-</project>
+<?xml version="1.0" encoding="UTF-8"?>\r
+<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"\r
+ xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/maven-v4_0_0.xsd">\r
+ <parent>\r
+ <groupId>eu.etaxonomy</groupId>\r
+ <artifactId>taxeditor-parent</artifactId>\r
+ <version>3.12.0-SNAPSHOT</version>\r
+ </parent>\r
+ <modelVersion>4.0.0</modelVersion>\r
+ <artifactId>eu.etaxonomy.taxeditor.cdmlib</artifactId>\r
+ <packaging>eclipse-plugin</packaging>\r
+ <name>CDM Library Dependencies Plugin</name>\r
+ <description>CDM Library and dependencies as a plugin</description>\r
+\r
+ <build>\r
+ <pluginManagement>\r
+ <plugins>\r
+ <plugin>\r
+ <groupId>org.apache.maven.plugins</groupId>\r
+ <artifactId>maven-surefire-plugin</artifactId>\r
+ <version>2.7</version>\r
+ </plugin>\r
+ </plugins>\r
+ </pluginManagement>\r
+ <plugins>\r
+ <plugin>\r
+ <groupId>org.apache.maven.plugins</groupId>\r
+ <artifactId>maven-dependency-plugin</artifactId>\r
+ <version>2.4</version>\r
+ <executions>\r
+ <execution>\r
+ <id>copy-dependencies</id>\r
+ <phase>validate</phase>\r
+ <goals>\r
+ <goal>copy-dependencies</goal>\r
+ </goals>\r
+ <configuration>\r
+ <excludeArtifactIds>\r
+ cdmlib-remote-webapp\r
+ </excludeArtifactIds>\r
+ <includeArtifactIds>\r
+ cdmlib-services,cdmlib-commons,cdmlib-persistence,cdmlib-ext,cdmlib-model,cdmlib-io,cdmlib-print,cdmlib-remote\r
+ </includeArtifactIds>\r
+ <outputDirectory>${basedir}/lib</outputDirectory>\r
+ <overWriteReleases>true</overWriteReleases>\r
+ <overWriteSnapshots>true</overWriteSnapshots>\r
+ <excludeTransitive>true</excludeTransitive>\r
+ </configuration>\r
+ </execution>\r
+ <execution>\r
+ <id>copy-dependency-war</id>\r
+ <phase>validate</phase>\r
+ <goals>\r
+ <goal>copy-dependencies</goal>\r
+ </goals>\r
+ <configuration>\r
+ <includeArtifactIds>\r
+ cdmlib-remote-webapp\r
+ </includeArtifactIds>\r
+ <outputDirectory>\r
+ ${basedir}/src/main/resources/etc/jetty\r
+ </outputDirectory>\r
+ <overWriteReleases>true</overWriteReleases>\r
+ <overWriteSnapshots>true</overWriteSnapshots>\r
+ <excludeTransitive>true</excludeTransitive>\r
+ </configuration>\r
+ </execution>\r
+ </executions>\r
+ </plugin>\r
+ <plugin>\r
+ <groupId>org.apache.maven.plugins</groupId>\r
+ <artifactId>maven-antrun-plugin</artifactId>\r
+ <version>1.7</version>\r
+ <executions>\r
+ <execution>\r
+ <id>update-snapshot-jar-names</id>\r
+ <phase>validate</phase>\r
+ <goals>\r
+ <goal>run</goal>\r
+ </goals>\r
+ <configuration>\r
+ <target>\r
+ <echo>Anonymizing war</echo>\r
+ <move todir="./src/main/resources/etc/jetty">\r
+ <fileset dir="./src/main/resources/etc/jetty" />\r
+ <mapper type="regexp"\r
+ from="(^cdmlib\-remote\-webapp).*(\.war)" to="\1\2" />\r
+ </move>\r
+ <echo>Update cdmlib jars to SNAPSHOT when build with\r
+ timestamp\r
+ </echo>\r
+ <move todir="./lib">\r
+ <fileset dir="./lib" />\r
+ <mapper type="regexp"\r
+ from="(^cdmlib\-.*\-\d+\.\d+\.\d+\-)[\d.-]+(\.jar)"\r
+ to="\1SNAPSHOT\2" />\r
+ </move>\r
+ <move todir="./lib">\r
+ <fileset dir="./lib" />\r
+ <mapper type="regexp"\r
+ from="(^cdmlib\-.*\-\d+\.\d+\.\d+\-)[\d.-]+(\-sources\.jar)"\r
+ to="\1SNAPSHOT\2" />\r
+ </move>\r
+ </target>\r
+ </configuration>\r
+ </execution>\r
+ <execution>\r
+ <id>remove-existing-jars</id>\r
+ <phase>clean</phase>\r
+ <goals>\r
+ <goal>run</goal>\r
+ </goals>\r
+ <configuration>\r
+ <target>\r
+ <echo>Remove all cdmlib jars</echo>\r
+ <delete>\r
+ <fileset dir="./lib" includes="cdmlib-*" />\r
+ </delete>\r
+ </target>\r
+ </configuration>\r
+ </execution>\r
+ </executions>\r
+ </plugin>\r
+ </plugins>\r
+ </build>\r
+ <profiles>\r
+ <profile>\r
+ <id>copyAllJars</id>\r
+ <build>\r
+ <plugins>\r
+ <plugin>\r
+ <groupId>org.apache.maven.plugins</groupId>\r
+ <artifactId>maven-dependency-plugin</artifactId>\r
+ <version>2.4</version>\r
+ <executions>\r
+ <execution>\r
+ <id>copy-all-dependencies</id>\r
+ <phase>validate</phase>\r
+ <goals>\r
+ <goal>copy-dependencies</goal>\r
+ </goals>\r
+ <configuration>\r
+ <excludeArtifactIds>\r
+ cdmlib-remote-webapp\r
+ </excludeArtifactIds>\r
+ <outputDirectory>${basedir}/lib</outputDirectory>\r
+ <overWriteReleases>true</overWriteReleases>\r
+ <overWriteSnapshots>true</overWriteSnapshots>\r
+ <excludeTransitive>true</excludeTransitive>\r
+ </configuration>\r
+ </execution>\r
+ </executions>\r
+ </plugin>\r
+ </plugins>\r
+ </build>\r
+ </profile>\r
+ </profiles>\r
+ <repositories>\r
+ <repository>\r
+ <id>SpringSource Enterprise Bundle Repository - External Bundle\r
+ Milestones\r
+ </id>\r
+ <url>http://repository.springsource.com/maven/bundles/milestone\r
+ </url>\r
+ </repository>\r
+ <repository>\r
+ <id>SpringSource Enterprise Bundle Repository - SpringSource\r
+ Bundle\r
+ Releases\r
+ </id>\r
+ <url>http://repository.springsource.com/maven/bundles/release\r
+ </url>\r
+ </repository>\r
+ <repository>\r
+ <id>SpringSource Enterprise Bundle Repository - External Bundle\r
+ Releases\r
+ </id>\r
+ <url>http://repository.springsource.com/maven/bundles/external\r
+ </url>\r
+ </repository>\r
+ </repositories>\r
+ <dependencies>\r
+ <dependency>\r
+ <groupId>eu.etaxonomy</groupId>\r
+ <artifactId>cdmlib-remote-webapp</artifactId>\r
+ <version>${cdmlib.version}</version>\r
+ <type>war</type>\r
+ </dependency>\r
+ <dependency>\r
+ <groupId>eu.etaxonomy</groupId>\r
+ <artifactId>cdmlib-commons</artifactId>\r
+ <version>${cdmlib.version}</version>\r
+ </dependency>\r
+ <dependency>\r
+ <groupId>eu.etaxonomy</groupId>\r
+ <artifactId>cdmlib-model</artifactId>\r
+ <version>${cdmlib.version}</version>\r
+ </dependency>\r
+ <dependency>\r
+ <groupId>eu.etaxonomy</groupId>\r
+ <artifactId>cdmlib-persistence</artifactId>\r
+ <version>${cdmlib.version}</version>\r
+ </dependency>\r
+ <dependency>\r
+ <groupId>eu.etaxonomy</groupId>\r
+ <artifactId>cdmlib-remote</artifactId>\r
+ <version>${cdmlib.version}</version>\r
+ </dependency>\r
+ <dependency>\r
+ <groupId>eu.etaxonomy</groupId>\r
+ <artifactId>cdmlib-print</artifactId>\r
+ <version>${cdmlib.version}</version>\r
+ </dependency>\r
+ <dependency>\r
+ <groupId>eu.etaxonomy</groupId>\r
+ <artifactId>cdmlib-services</artifactId>\r
+ <version>${cdmlib.version}</version>\r
+ </dependency>\r
+ <dependency>\r
+ <groupId>eu.etaxonomy</groupId>\r
+ <artifactId>cdmlib-io</artifactId>\r
+ <version>${cdmlib.version}</version>\r
+ </dependency>\r
+ <dependency>\r
+ <groupId>eu.etaxonomy</groupId>\r
+ <artifactId>cdmlib-ext</artifactId>\r
+ <version>${cdmlib.version}</version>\r
+ </dependency>\r
+\r
+ <!-- <dependency> -->\r
+ <!-- <groupId>org.eclipse.jetty</groupId> -->\r
+ <!-- <artifactId>jetty-server</artifactId> -->\r
+ <!-- <version>9.1.3.v20140225</version> -->\r
+ <!-- </dependency> -->\r
+ <!-- <dependency> -->\r
+ <!-- <groupId>org.eclipse.jetty</groupId> -->\r
+ <!-- <artifactId>jetty-util</artifactId> -->\r
+ <!-- <version>9.1.3.v20140225</version> -->\r
+ <!-- </dependency> -->\r
+ <!-- <dependency> -->\r
+ <!-- <groupId>org.eclipse.jetty</groupId> -->\r
+ <!-- <artifactId>jetty-xml</artifactId> -->\r
+ <!-- <version>9.1.3.v20140225</version> -->\r
+ <!-- </dependency> -->\r
+ <!-- <dependency> -->\r
+ <!-- <groupId>org.eclipse.jetty</groupId> -->\r
+ <!-- <artifactId>jetty-servlet</artifactId> -->\r
+ <!-- <version>9.1.3.v20140225</version> -->\r
+ <!-- </dependency> -->\r
+ <!-- <dependency> -->\r
+ <!-- <groupId>org.eclipse.jetty</groupId> -->\r
+ <!-- <artifactId>jetty-webapp</artifactId> -->\r
+ <!-- <version>9.1.3.v20140225</version> -->\r
+ <!-- </dependency> -->\r
+ <!-- <dependency> -->\r
+ <!-- <groupId>org.eclipse.jetty</groupId> -->\r
+ <!-- <artifactId>jetty-security</artifactId> -->\r
+ <!-- <version>9.1.3.v20140225</version> -->\r
+ <!-- </dependency> -->\r
+ <!-- <dependency> -->\r
+ <!-- <groupId>org.eclipse.jetty</groupId> -->\r
+ <!-- <artifactId>jetty-http</artifactId> -->\r
+ <!-- <version>${jetty.version}</version> -->\r
+ <!-- </dependency> -->\r
+ <!-- <dependency> -->\r
+ <!-- <groupId>org.eclipse.jetty</groupId> -->\r
+ <!-- <artifactId>jetty-io</artifactId> -->\r
+ <!-- <version>${jetty.version}</version> -->\r
+ <!-- </dependency> -->\r
+ <!-- <dependency> -->\r
+ <!-- <groupId>javax.servlet</groupId> -->\r
+ <!-- <artifactId>javax.servlet-api</artifactId> -->\r
+ <!-- <version>3.1.0</version> -->\r
+ <!-- </dependency> -->\r
+\r
+ <!-- <dependency> -->\r
+ <!-- <groupId>javax.servlet</groupId> -->\r
+ <!-- <artifactId>jsp-api</artifactId> -->\r
+ <!-- <version>2.0</version> -->\r
+ <!-- </dependency> -->\r
+\r
+ <dependency>\r
+ <groupId>net.sf.ehcache</groupId>\r
+ <artifactId>ehcache-core</artifactId>\r
+ <version>2.4.3</version>\r
+ </dependency>\r
+ <dependency>\r
+ <groupId>org.hibernate</groupId>\r
+ <artifactId>hibernate-core</artifactId>\r
+ <version>4.1.10.Final</version>\r
+ </dependency>\r
+ <dependency>\r
+ <groupId>org.hibernate.common</groupId>\r
+ <artifactId>hibernate-commons-annotations</artifactId>\r
+ <version>4.0.1.Final</version>\r
+ </dependency>\r
+ <dependency>\r
+ <groupId>org.hibernate</groupId>\r
+ <artifactId>hibernate-search-engine</artifactId>\r
+ <version>4.2.0.Final</version>\r
+ </dependency>\r
+ <dependency>\r
+ <groupId>org.hibernate.javax.persistence</groupId>\r
+ <artifactId>hibernate-jpa-2.0-api</artifactId>\r
+ <version>1.0.1.Final</version>\r
+ </dependency>\r
+ <dependency>\r
+ <groupId>org.hibernate</groupId>\r
+ <artifactId>hibernate-envers</artifactId>\r
+ <version>4.1.10.Final</version>\r
+ </dependency>\r
+ <dependency>\r
+ <groupId>org.hibernate</groupId>\r
+ <artifactId>hibernate-entitymanager</artifactId>\r
+ <version>4.1.10.Final</version>\r
+ </dependency>\r
+ <dependency>\r
+ <groupId>dom4j</groupId>\r
+ <artifactId>dom4j</artifactId>\r
+ <version>1.6</version>\r
+ </dependency>\r
+ <dependency>\r
+ <groupId>org.jadira.usertype</groupId>\r
+ <artifactId>usertype.jodatime</artifactId>\r
+ <version>2.0.1</version>\r
+ </dependency>\r
+ <dependency>\r
+ <groupId>org.jadira.usertype</groupId>\r
+ <artifactId>usertype.spi</artifactId>\r
+ <version>2.0.1</version>\r
+ </dependency>\r
+\r
+ <dependency>\r
+ <groupId>junit</groupId>\r
+ <artifactId>junit</artifactId>\r
+ <version>4.11</version>\r
+ <scope>test</scope>\r
+ </dependency>\r
+ <dependency>\r
+ <groupId>log4j</groupId>\r
+ <artifactId>log4j</artifactId>\r
+ <version>1.2.17</version>\r
+ </dependency>\r
+ <dependency>\r
+ <groupId>org.jdom</groupId>\r
+ <artifactId>jdom</artifactId>\r
+ <version>1.1.3</version>\r
+ </dependency>\r
+ <dependency>\r
+ <groupId>org.springframework</groupId>\r
+ <artifactId>org.springframework.context</artifactId>\r
+ <version>3.2.2.RELEASE</version>\r
+ </dependency>\r
+ <dependency>\r
+ <groupId>org.springframework</groupId>\r
+ <artifactId>org.springframework.context.support</artifactId>\r
+ <version>3.2.2.RELEASE</version>\r
+ </dependency>\r
+ <dependency>\r
+ <groupId>org.springframework</groupId>\r
+ <artifactId>org.springframework.aspects</artifactId>\r
+ <version>3.2.2.RELEASE</version>\r
+ </dependency>\r
+ <dependency>\r
+ <groupId>org.springframework</groupId>\r
+ <artifactId>org.springframework.test</artifactId>\r
+ <version>3.2.2.RELEASE</version>\r
+ </dependency>\r
+ <dependency>\r
+ <groupId>org.springframework</groupId>\r
+ <artifactId>org.springframework.beans</artifactId>\r
+ <version>3.2.2.RELEASE</version>\r
+ </dependency>\r
+ <dependency>\r
+ <groupId>org.springframework</groupId>\r
+ <artifactId>org.springframework.transaction</artifactId>\r
+ <version>3.2.2.RELEASE</version>\r
+ </dependency>\r
+ <dependency>\r
+ <groupId>org.springframework</groupId>\r
+ <artifactId>org.springframework.web</artifactId>\r
+ <version>3.2.2.RELEASE</version>\r
+ </dependency>\r
+ <dependency>\r
+ <groupId>org.springframework</groupId>\r
+ <artifactId>org.springframework.core</artifactId>\r
+ <version>3.2.2.RELEASE</version>\r
+ </dependency>\r
+ <dependency>\r
+ <groupId>org.springframework</groupId>\r
+ <artifactId>org.springframework.aop</artifactId>\r
+ <version>3.2.2.RELEASE</version>\r
+ </dependency>\r
+ <dependency>\r
+ <groupId>org.springframework</groupId>\r
+ <artifactId>org.springframework.expression</artifactId>\r
+ <version>3.2.2.RELEASE</version>\r
+ </dependency>\r
+ <dependency>\r
+ <groupId>org.springframework</groupId>\r
+ <artifactId>org.springframework.orm</artifactId>\r
+ <version>3.2.2.RELEASE</version>\r
+ </dependency>\r
+ <dependency>\r
+ <groupId>org.springframework</groupId>\r
+ <artifactId>org.springframework.jdbc</artifactId>\r
+ <version>3.2.2.RELEASE</version>\r
+ </dependency>\r
+ <dependency>\r
+ <groupId>org.springframework.security</groupId>\r
+ <artifactId>spring-security-core</artifactId>\r
+ <version>3.1.3.RELEASE</version>\r
+ </dependency>\r
+ <dependency>\r
+ <groupId>org.springframework.security</groupId>\r
+ <artifactId>spring-security-config</artifactId>\r
+ <version>3.1.3.RELEASE</version>\r
+ </dependency>\r
+ <dependency>\r
+ <groupId>org.springframework.security</groupId>\r
+ <artifactId>spring-security-remoting</artifactId>\r
+ <version>3.1.3.RELEASE</version>\r
+ </dependency>\r
+ <dependency>\r
+ <groupId>org.jboss.logging</groupId>\r
+ <artifactId>jboss-logging</artifactId>\r
+ <version>3.1.3.GA</version>\r
+ </dependency>\r
+ <dependency>\r
+ <groupId>org.hamcrest</groupId>\r
+ <artifactId>hamcrest-core</artifactId>\r
+ <version>1.3</version>\r
+ </dependency>\r
+ <dependency>\r
+ <groupId>com.mchange</groupId>\r
+ <artifactId>c3p0</artifactId>\r
+ <version>0.9.2</version>\r
+ </dependency>\r
+ <dependency>\r
+ <groupId>org.jboss.spec.javax.transaction</groupId>\r
+ <artifactId>jboss-transaction-api_1.1_spec</artifactId>\r
+ <version>1.0.0.Final</version>\r
+ </dependency>\r
+ <dependency>\r
+ <groupId>org.aspectj</groupId>\r
+ <artifactId>aspectjrt</artifactId>\r
+ <version>1.7.1</version>\r
+ </dependency>\r
+ <dependency>\r
+ <groupId>commons-logging</groupId>\r
+ <artifactId>commons-logging</artifactId>\r
+ <version>1.1.1</version>\r
+ </dependency>\r
+ <dependency>\r
+ <groupId>commons-lang</groupId>\r
+ <artifactId>commons-lang</artifactId>\r
+ <version>2.6</version>\r
+ </dependency>\r
+ <dependency>\r
+ <groupId>aopalliance</groupId>\r
+ <artifactId>aopalliance</artifactId>\r
+ <version>1.0</version>\r
+ </dependency>\r
+ <dependency>\r
+ <groupId>joda-time</groupId>\r
+ <artifactId>joda-time</artifactId>\r
+ <version>2.1</version>\r
+ </dependency>\r
+ <dependency>\r
+ <groupId>com.ibm.lsid</groupId>\r
+ <artifactId>lsid-client</artifactId>\r
+ <version>1.1.2</version>\r
+ </dependency>\r
+ <dependency>\r
+ <groupId>com.ibm.lsid</groupId>\r
+ <artifactId>lsid-server</artifactId>\r
+ <version>1.1.2</version>\r
+ </dependency>\r
+ <dependency>\r
+ <groupId>org.apache.lucene</groupId>\r
+ <artifactId>lucene-core</artifactId>\r
+ <version>3.6.2</version>\r
+ </dependency>\r
+ <dependency>\r
+ <groupId>org.slf4j</groupId>\r
+ <artifactId>slf4j-api</artifactId>\r
+ <version>1.7.2</version>\r
+ </dependency>\r
+ <dependency>\r
+ <groupId>org.javassist</groupId>\r
+ <artifactId>javassist</artifactId>\r
+ <version>3.17.1-GA</version>\r
+ </dependency>\r
+ <dependency>\r
+ <groupId>au.com.bytecode</groupId>\r
+ <artifactId>opencsv</artifactId>\r
+ <version>2.4</version>\r
+ </dependency>\r
+\r
+ <!-- For Unit Tests Start -->\r
+\r
+ <dependency>\r
+ <groupId>org.unitils</groupId>\r
+ <artifactId>unitils-core</artifactId>\r
+ <version>3.4.2</version>\r
+ </dependency>\r
+ <dependency>\r
+ <groupId>org.unitils</groupId>\r
+ <artifactId>unitils-spring</artifactId>\r
+ <version>3.4.2</version>\r
+ </dependency>\r
+ <dependency>\r
+ <groupId>org.unitils</groupId>\r
+ <artifactId>unitils-database</artifactId>\r
+ <version>3.4.2</version>\r
+ </dependency>\r
+ <dependency>\r
+ <groupId>commons-dbcp</groupId>\r
+ <artifactId>commons-dbcp</artifactId>\r
+ <version>1.4</version>\r
+ </dependency>\r
+ <dependency>\r
+ <groupId>commons-pool</groupId>\r
+ <artifactId>commons-pool</artifactId>\r
+ <version>1.5.4</version>\r
+ </dependency>\r
+ <dependency>\r
+ <groupId>org.unitils</groupId>\r
+ <artifactId>unitils-dbmaintainer</artifactId>\r
+ <version>3.4.2</version>\r
+ </dependency>\r
+ <dependency>\r
+ <groupId>com.h2database</groupId>\r
+ <artifactId>h2</artifactId>\r
+ <version>1.4.181</version>\r
+ </dependency>\r
+ <dependency>\r
+ <groupId>org.unitils</groupId>\r
+ <artifactId>unitils-dbunit</artifactId>\r
+ <version>3.4.2</version>\r
+ </dependency>\r
+ <dependency>\r
+ <groupId>org.dbunit</groupId>\r
+ <artifactId>dbunit</artifactId>\r
+ <version>2.4.9</version>\r
+ </dependency>\r
+ <!-- For Unit Tests End -->\r
+\r
+ <!-- For Hibernate Mapping Start -->\r
+ <dependency>\r
+ <groupId>wsdl4j</groupId>\r
+ <artifactId>wsdl4j</artifactId>\r
+ <version>1.6.3</version>\r
+ </dependency>\r
+ <dependency>\r
+ <groupId>javax.validation</groupId>\r
+ <artifactId>validation-api</artifactId>\r
+ <version>1.1.0.Final</version>\r
+ </dependency>\r
+ <!-- For Hibernate Mapping End -->\r
+\r
+ </dependencies>\r
+</project>\r
+
--- /dev/null
+// $Id$
+/**
+* Copyright (C) 2015 EDIT
+* European Distributed Institute of Taxonomy
+* http://www.e-taxonomy.eu
+*
+* The contents of this file are subject to the Mozilla Public License Version 1.1
+* See LICENSE.TXT at the top of this package for the full license terms.
+*/
+package eu.etaxonomy.cdm.api.application;
+
+/**
+ * @author cmathew
+ * @date 18 Jun 2015
+ *
+ */
+public class CdmApplicationException extends Exception {
+
+ public CdmApplicationException(Exception ex) {
+ super(ex);
+ }
+
+}
/**\r
-* Copyright (C) 2014 EDIT\r
-* European Distributed Institute of Taxonomy \r
-* http://www.e-taxonomy.eu\r
-* \r
-* The contents of this file are subject to the Mozilla Public License Version 1.1\r
-* See LICENSE.TXT at the top of this package for the full license terms.\r
-*/\r
+ * Copyright (C) 2014 EDIT\r
+ * European Distributed Institute of Taxonomy\r
+ * http://www.e-taxonomy.eu\r
+ *\r
+ * The contents of this file are subject to the Mozilla Public License Version 1.1\r
+ * See LICENSE.TXT at the top of this package for the full license terms.\r
+ */\r
\r
package eu.etaxonomy.cdm.api.application;\r
\r
-import javax.sql.DataSource;\r
-\r
-import org.hibernate.SessionFactory;\r
+import java.util.ArrayList;\r
+import java.util.Arrays;\r
+import java.util.HashMap;\r
+import java.util.List;\r
+import java.util.Map;\r
\r
import org.apache.log4j.Logger;\r
-import org.springframework.beans.factory.annotation.Autowired;\r
+import org.springframework.beans.BeansException;\r
+import org.springframework.context.ApplicationContext;\r
+import org.springframework.context.ApplicationContextAware;\r
+import org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean;\r
+import org.springframework.security.access.AccessDecisionVoter;\r
+import org.springframework.security.authentication.AuthenticationProvider;\r
+import org.springframework.security.authentication.ProviderManager;\r
+import org.springframework.security.authentication.UsernamePasswordAuthenticationToken;\r
+import org.springframework.security.authentication.dao.DaoAuthenticationProvider;\r
+import org.springframework.security.authentication.dao.ReflectionSaltSource;\r
+import org.springframework.security.authentication.encoding.Md5PasswordEncoder;\r
+import org.springframework.security.core.Authentication;\r
+import org.springframework.security.core.context.SecurityContext;\r
+import org.springframework.security.core.context.SecurityContextHolder;\r
import org.springframework.stereotype.Component;\r
import org.springframework.transaction.PlatformTransactionManager;\r
import org.springframework.transaction.TransactionStatus;\r
\r
import eu.etaxonomy.cdm.api.conversation.ConversationHolder;\r
import eu.etaxonomy.cdm.api.conversation.ConversationHolderMock;\r
+import eu.etaxonomy.cdm.api.service.IAgentService;\r
+import eu.etaxonomy.cdm.api.service.IAnnotationService;\r
+import eu.etaxonomy.cdm.api.service.IClassificationService;\r
+import eu.etaxonomy.cdm.api.service.ICollectionService;\r
+import eu.etaxonomy.cdm.api.service.ICommonService;\r
import eu.etaxonomy.cdm.api.service.IDatabaseService;\r
+import eu.etaxonomy.cdm.api.service.IDescriptionService;\r
+import eu.etaxonomy.cdm.api.service.IEntityConstraintViolationService;\r
+import eu.etaxonomy.cdm.api.service.IEntityValidationService;\r
+import eu.etaxonomy.cdm.api.service.IFeatureNodeService;\r
+import eu.etaxonomy.cdm.api.service.IFeatureTreeService;\r
+import eu.etaxonomy.cdm.api.service.IGrantedAuthorityService;\r
+import eu.etaxonomy.cdm.api.service.IGroupService;\r
+import eu.etaxonomy.cdm.api.service.IIdentificationKeyService;\r
+import eu.etaxonomy.cdm.api.service.ILocationService;\r
+import eu.etaxonomy.cdm.api.service.IMediaService;\r
+import eu.etaxonomy.cdm.api.service.INameService;\r
+import eu.etaxonomy.cdm.api.service.IOccurrenceService;\r
+import eu.etaxonomy.cdm.api.service.IPolytomousKeyNodeService;\r
+import eu.etaxonomy.cdm.api.service.IPolytomousKeyService;\r
+import eu.etaxonomy.cdm.api.service.IReferenceService;\r
+import eu.etaxonomy.cdm.api.service.IService;\r
+import eu.etaxonomy.cdm.api.service.ITaxonNodeService;\r
+import eu.etaxonomy.cdm.api.service.ITaxonService;\r
+import eu.etaxonomy.cdm.api.service.ITermService;\r
+import eu.etaxonomy.cdm.api.service.ITestService;\r
+import eu.etaxonomy.cdm.api.service.IUserService;\r
+import eu.etaxonomy.cdm.api.service.IVocabularyService;\r
+import eu.etaxonomy.cdm.api.service.IWorkingSetService;\r
+import eu.etaxonomy.cdm.api.service.molecular.IAmplificationService;\r
+import eu.etaxonomy.cdm.api.service.molecular.IPrimerService;\r
+import eu.etaxonomy.cdm.api.service.molecular.ISequenceService;\r
import eu.etaxonomy.cdm.ext.geo.IEditGeoService;\r
+import eu.etaxonomy.cdm.io.service.IIOService;\r
+import eu.etaxonomy.cdm.model.common.CdmBase;\r
+import eu.etaxonomy.cdm.persistence.hibernate.permission.CdmPermissionEvaluator;\r
+import eu.etaxonomy.cdm.persistence.hibernate.permission.ICdmPermissionEvaluator;\r
+import eu.etaxonomy.cdm.persistence.hibernate.permission.UnanimousBasedUnrevokable;\r
+import eu.etaxonomy.cdm.persistence.hibernate.permission.voter.DescriptionBaseVoter;\r
+import eu.etaxonomy.cdm.persistence.hibernate.permission.voter.DescriptionElementVoter;\r
+import eu.etaxonomy.cdm.persistence.hibernate.permission.voter.GrantAlwaysVoter;\r
+import eu.etaxonomy.cdm.persistence.hibernate.permission.voter.TaxonBaseVoter;\r
+import eu.etaxonomy.cdm.persistence.hibernate.permission.voter.TaxonNodeVoter;\r
+import eu.etaxonomy.taxeditor.remoting.source.ICdmRemoteSource;\r
+import eu.etaxonomy.taxeditor.service.CachedCommonServiceImpl;\r
+import eu.etaxonomy.taxeditor.service.CdmServiceRequestExecutor;\r
+import eu.etaxonomy.taxeditor.service.ICachedCommonService;\r
+import eu.etaxonomy.taxeditor.service.TermServiceRequestExecutor;\r
+import eu.etaxonomy.taxeditor.session.CdmEntitySessionManager;\r
+import eu.etaxonomy.taxeditor.session.ICdmEntitySessionManager;\r
\r
\r
/**\r
*\r
*/\r
@Component\r
-public class CdmApplicationRemoteConfiguration extends CdmApplicationDefaultConfiguration {\r
- \r
- @SuppressWarnings("unused")\r
- private static final Logger logger = Logger.getLogger(CdmApplicationRemoteConfiguration.class);\r
-\r
- @Autowired\r
- IEditGeoService editGeoService;\r
- \r
- public CdmApplicationRemoteConfiguration() {\r
- }\r
- \r
+public class CdmApplicationRemoteConfiguration implements ICdmApplicationConfiguration, ApplicationContextAware {\r
+\r
+ @SuppressWarnings("unused")\r
+ private static final Logger logger = Logger.getLogger(CdmApplicationRemoteConfiguration.class);\r
+\r
+ protected ApplicationContext applicationContext;\r
+\r
+ private ICdmRemoteSource remoteSource;\r
+\r
+ private Map serviceMap = new HashMap<Class<IService>, IService>();\r
+\r
+ private ICdmEntitySessionManager cdmEntitySessionManager;\r
+\r
+ private CdmPermissionEvaluator cdmPermissionEvaluator;\r
+\r
+ private ProviderManager authenticationManager;\r
+\r
+ private ICachedCommonService cachedCommonService;\r
+\r
+ public CdmApplicationRemoteConfiguration() {}\r
+\r
+ public CdmApplicationRemoteConfiguration(ICdmRemoteSource remoteSource) {\r
+ this.remoteSource = remoteSource;\r
+ }\r
+\r
+ public void setRemoteSource(ICdmRemoteSource remoteSource) {\r
+ this.remoteSource = remoteSource;\r
+ }\r
+\r
+ private Object getService(Class<?> clazz, String serviceSuffix, CdmServiceRequestExecutor executor) {\r
+ if(serviceMap.containsKey(clazz)) {\r
+ return serviceMap.get(clazz);\r
+ }\r
+ String baseUrl;\r
+ if(remoteSource.getContextPath() == null || remoteSource.getContextPath().equals("")) {\r
+ baseUrl = "http://" + remoteSource.getServer() + ":" + String.valueOf(remoteSource.getPort());\r
+ } else {\r
+ baseUrl = "http://" + remoteSource.getServer() + ":" + String.valueOf(remoteSource.getPort()) + "/" + remoteSource.getContextPath();\r
+ }\r
+ HttpInvokerProxyFactoryBean proxy = new HttpInvokerProxyFactoryBean();\r
+ proxy.setServiceInterface(clazz);\r
+ proxy.setServiceUrl(baseUrl + serviceSuffix);\r
+ if(executor != null) {\r
+ executor.setReadTimeout(0);\r
+ proxy.setHttpInvokerRequestExecutor(executor);\r
+ }\r
+ proxy.afterPropertiesSet();\r
+ Object service = proxy.getObject();\r
+ serviceMap.put(clazz, service);\r
+ return service;\r
+ }\r
+\r
+ // ****************************** APPLICATION CONTEXT *************************************************/\r
+\r
+ @Override\r
+ public void setApplicationContext(ApplicationContext applicationContext) throws BeansException{\r
+ this.applicationContext = applicationContext;\r
+ }\r
+\r
/* (non-Javadoc)\r
* @see eu.etaxonomy.cdm.api.application.CdmApplicationDefaultConfiguration#getTransactionManager()\r
*/\r
@Override\r
public PlatformTransactionManager getTransactionManager() throws UnsupportedOperationException {\r
- throw new UnsupportedOperationException("getTransactionManager is not implemented for CdmApplicationRemoteConfiguration");\r
- }\r
+ throw new UnsupportedOperationException("getTransactionManager is not implemented for CdmApplicationRemoteConfiguration");\r
+ }\r
\r
\r
- /* (non-Javadoc)\r
- * @see eu.etaxonomy.cdm.api.application.ICdmApplicationConfiguration#startTransaction()\r
+\r
+ /**\r
+ * @return\r
*/\r
+ public IEditGeoService getEditGeoService() {\r
+ return (IEditGeoService) getService(IEditGeoService.class, "/remoting/editgeo.service", new CdmServiceRequestExecutor());\r
+ }\r
+\r
+ /**\r
+ * @return\r
+ */\r
+ public ICachedCommonService getCachedCommonService(){\r
+ if(cachedCommonService == null) {\r
+ cachedCommonService = new CachedCommonServiceImpl();\r
+ }\r
+ return cachedCommonService;\r
+ }\r
+\r
+\r
+ public ICdmEntitySessionManager getCdmEntitySessionManager() {\r
+ if(cdmEntitySessionManager == null) {\r
+ cdmEntitySessionManager = new CdmEntitySessionManager();\r
+ }\r
+ return cdmEntitySessionManager;\r
+ }\r
+\r
+\r
+\r
+\r
+\r
+\r
+ // ****************************** GETTER *************************************************/\r
+\r
@Override\r
- public TransactionStatus startTransaction() throws UnsupportedOperationException {\r
- throw new UnsupportedOperationException("startTransaction is not implemented for CdmApplicationRemoteConfiguration");\r
- }\r
+ public final Object getBean(String name){\r
+ throw new UnsupportedOperationException("getBean is not implemented for CdmApplicationRemoteConfiguration");\r
+ }\r
\r
+ @Override\r
+ public IAgentService getAgentService(){\r
+ return (IAgentService) getService(IAgentService.class, "/remoting/agent.service", new CdmServiceRequestExecutor());\r
+ }\r
+\r
+ @Override\r
+ public IAnnotationService getAnnotationService(){\r
+ return (IAnnotationService) getService(IAnnotationService.class, "/remoting/annotation.service", new CdmServiceRequestExecutor());\r
+ }\r
+\r
+ @Override\r
+ public IDatabaseService getDatabaseService(){\r
+ return (IDatabaseService) getService(IDatabaseService.class, "/remoting/database.service", new CdmServiceRequestExecutor());\r
+ }\r
+\r
+ @Override\r
+ public INameService getNameService(){\r
+ return (INameService) getService(INameService.class, "/remoting/name.service", new CdmServiceRequestExecutor());\r
+ }\r
+\r
+ @Override\r
+ public IReferenceService getReferenceService(){\r
+ return (IReferenceService) getService(IReferenceService.class, "/remoting/reference.service", new CdmServiceRequestExecutor());\r
+ }\r
+\r
+ @Override\r
+ public ITaxonService getTaxonService(){\r
+ return (ITaxonService) getService(ITaxonService.class, "/remoting/taxon.service", new CdmServiceRequestExecutor());\r
+ }\r
+\r
+ @Override\r
+ public IClassificationService getClassificationService(){\r
+ return (IClassificationService) getService(IClassificationService.class, "/remoting/classification.service", new CdmServiceRequestExecutor());\r
+ }\r
+\r
+ @Override\r
+ public ITaxonNodeService getTaxonNodeService(){\r
+ return (ITaxonNodeService) getService(ITaxonNodeService.class, "/remoting/taxonnode.service", new CdmServiceRequestExecutor());\r
+ }\r
+\r
+ @Override\r
+ public IDescriptionService getDescriptionService(){\r
+ return (IDescriptionService) getService(IDescriptionService.class, "/remoting/description.service", new CdmServiceRequestExecutor());\r
+ }\r
+\r
+ @Override\r
+ public IOccurrenceService getOccurrenceService(){\r
+ return (IOccurrenceService) getService(IOccurrenceService.class, "/remoting/occurrence.service", new CdmServiceRequestExecutor());\r
+ }\r
+\r
+ @Override\r
+ public IPrimerService getPrimerService(){\r
+ return (IPrimerService) getService(IPrimerService.class, "/remoting/primer.service", new CdmServiceRequestExecutor());\r
+ }\r
+\r
+ @Override\r
+ public IAmplificationService getAmplificationService(){\r
+ return (IAmplificationService) getService(IAmplificationService.class, "/remoting/amplification.service", new CdmServiceRequestExecutor());\r
+ }\r
+\r
+ @Override\r
+ public ISequenceService getSequenceService(){\r
+ return (ISequenceService) getService(ISequenceService.class, "/remoting/sequence.service", new CdmServiceRequestExecutor());\r
+ }\r
+\r
+ @Override\r
+ public IMediaService getMediaService(){\r
+ return (IMediaService) getService(IMediaService.class, "/remoting/media.service", new CdmServiceRequestExecutor());\r
+ }\r
+\r
+ @Override\r
+ public ITermService getTermService(){\r
+ return (ITermService) getService(ITermService.class, "/remoting/term.service", new TermServiceRequestExecutor());\r
+ }\r
+\r
+ @Override\r
+ public ICommonService getCommonService(){\r
+ return (ICommonService) getService(ICommonService.class, "/remoting/common.service", new CdmServiceRequestExecutor());\r
+ }\r
+\r
+ @Override\r
+ public ILocationService getLocationService(){\r
+ return (ILocationService) getService(ILocationService.class, "/remoting/location.service", new CdmServiceRequestExecutor());\r
+ }\r
+\r
+ @Override\r
+ public IUserService getUserService(){\r
+ return (IUserService) getService(IUserService.class, "/remoting-public/user.service", new CdmServiceRequestExecutor());\r
+ }\r
+\r
+ @Override\r
+ public IGrantedAuthorityService getGrantedAuthorityService(){\r
+ return (IGrantedAuthorityService) getService(IGrantedAuthorityService.class, "/remoting/grantedauthority.service", new CdmServiceRequestExecutor());\r
+ }\r
+\r
+ @Override\r
+ public IService<CdmBase> getMainService(){\r
+ return null;\r
+ }\r
+\r
+\r
+ @Override\r
+ public ProviderManager getAuthenticationManager(){\r
+ if(authenticationManager != null) {\r
+ return authenticationManager;\r
+ }\r
+ Md5PasswordEncoder passwordEncoder = new Md5PasswordEncoder();\r
+ ReflectionSaltSource saltSource = new ReflectionSaltSource();\r
+ saltSource.setUserPropertyToUse("getUsername");\r
+\r
+ DaoAuthenticationProvider daoAuthenticationProvider = new DaoAuthenticationProvider();\r
+ daoAuthenticationProvider.setUserDetailsService(getUserService());\r
+ daoAuthenticationProvider.setSaltSource(saltSource);\r
+ daoAuthenticationProvider.setPasswordEncoder(passwordEncoder);\r
+\r
+ authenticationManager = new ProviderManager(Arrays.asList((AuthenticationProvider)daoAuthenticationProvider));\r
+ return authenticationManager;\r
+ }\r
+\r
+\r
+ @Override\r
+ public ConversationHolder NewConversation() {\r
+ return new ConversationHolderMock();\r
+ }\r
+\r
+ @Override\r
+ public ICollectionService getCollectionService(){\r
+ return (ICollectionService) getService(ICollectionService.class, "/remoting/collection.service", new CdmServiceRequestExecutor());\r
+ }\r
+\r
+ @Override\r
+ public IFeatureTreeService getFeatureTreeService(){\r
+ return (IFeatureTreeService) getService(IFeatureTreeService.class, "/remoting/featuretree.service", new CdmServiceRequestExecutor());\r
+ }\r
+\r
+ @Override\r
+ public IFeatureNodeService getFeatureNodeService(){\r
+ return (IFeatureNodeService) getService(IFeatureNodeService.class, "/remoting/featurenode.service", new CdmServiceRequestExecutor());\r
+ }\r
+\r
+ @Override\r
+ public IVocabularyService getVocabularyService(){\r
+ return (IVocabularyService) getService(IVocabularyService.class, "/remoting/vocabulary.service", new CdmServiceRequestExecutor());\r
+ }\r
+\r
+ @Override\r
+ public IIdentificationKeyService getIdentificationKeyService(){\r
+ return (IIdentificationKeyService) getService(IIdentificationKeyService.class, "/remoting/identificationkey.service", new CdmServiceRequestExecutor());\r
+ }\r
+\r
+ @Override\r
+ public IPolytomousKeyService getPolytomousKeyService(){\r
+ return (IPolytomousKeyService) getService(IPolytomousKeyService.class, "/remoting/polytomouskey.service", new CdmServiceRequestExecutor());\r
+ }\r
+\r
+\r
+ @Override\r
+ public IPolytomousKeyNodeService getPolytomousKeyNodeService(){\r
+ return (IPolytomousKeyNodeService) getService(IPolytomousKeyNodeService.class, "/remoting/polytomouskeynode.service", new CdmServiceRequestExecutor());\r
+ }\r
+\r
+ @Override\r
+ public IWorkingSetService getWorkingSetService(){\r
+ return (IWorkingSetService) getService(IWorkingSetService.class, "/remoting/workingset.service", new CdmServiceRequestExecutor());\r
+ }\r
+\r
+ @Override\r
+ public IGroupService getGroupService(){\r
+ return (IGroupService) getService(IGroupService.class, "/remoting/group.service", new CdmServiceRequestExecutor());\r
+ }\r
+\r
+\r
+ @Override\r
+ public IEntityValidationService getEntityValidationService(){\r
+ return (IEntityValidationService) getService(IEntityValidationService.class, "/remoting/entityvalidation.service", new CdmServiceRequestExecutor());\r
+ }\r
+\r
+\r
+ @Override\r
+ public IEntityConstraintViolationService getEntityConstraintViolationService(){\r
+ return (IEntityConstraintViolationService) getService(IEntityConstraintViolationService.class, "/remoting/entityconstraintviolation.service", new CdmServiceRequestExecutor());\r
+ }\r
+\r
+ @Override\r
+ public ICdmPermissionEvaluator getPermissionEvaluator(){\r
+\r
+ if(cdmPermissionEvaluator != null) {\r
+ return cdmPermissionEvaluator;\r
+ }\r
+ List<AccessDecisionVoter> decisionVoters = new ArrayList<AccessDecisionVoter>();\r
+ decisionVoters.add(new GrantAlwaysVoter());\r
+ decisionVoters.add(new TaxonNodeVoter());\r
+ decisionVoters.add(new TaxonBaseVoter());\r
+ decisionVoters.add(new DescriptionBaseVoter());\r
+ decisionVoters.add(new DescriptionElementVoter());\r
+ UnanimousBasedUnrevokable accessDecisionManager = new UnanimousBasedUnrevokable(decisionVoters);\r
+\r
+ cdmPermissionEvaluator = new CdmPermissionEvaluator();\r
+ cdmPermissionEvaluator.setAccessDecisionManager(accessDecisionManager);\r
+\r
+ return cdmPermissionEvaluator;\r
+ }\r
+\r
+\r
+ @Override\r
+ public TransactionStatus startTransaction() throws UnsupportedOperationException {\r
+ throw new UnsupportedOperationException("startTransaction is not implemented for CdmApplicationRemoteConfiguration");\r
+ }\r
\r
- /* (non-Javadoc)\r
- * @see eu.etaxonomy.cdm.api.application.ICdmApplicationConfiguration#startTransaction()\r
- */\r
@Override\r
public TransactionStatus startTransaction(Boolean readOnly) throws UnsupportedOperationException {\r
- throw new UnsupportedOperationException("startTransaction is not implemented for CdmApplicationRemoteConfiguration");\r
- }\r
+ throw new UnsupportedOperationException("startTransaction is not implemented for CdmApplicationRemoteConfiguration");\r
+ }\r
\r
\r
- /* (non-Javadoc)\r
- * @see eu.etaxonomy.cdm.api.application.CdmApplicationDefaultConfiguration#commitTransaction(org.springframework.transaction.TransactionStatus)\r
- */\r
@Override\r
public void commitTransaction(TransactionStatus txStatus) throws UnsupportedOperationException {\r
- throw new UnsupportedOperationException("commitTransaction is not implemented for CdmApplicationRemoteConfiguration");\r
- }\r
- \r
- /* (non-Javadoc)\r
- * @see eu.etaxonomy.cdm.api.application.CdmApplicationDefaultConfiguration#NewConversation()\r
- */\r
- @Override\r
- public ConversationHolder NewConversation() { \r
- return new ConversationHolderMock();\r
- }\r
- \r
- /**\r
- * @return\r
- */\r
- public IEditGeoService getEditGeoService() {\r
- return this.editGeoService;\r
- }\r
- \r
- /* (non-Javadoc)\r
- * @see eu.etaxonomy.cdm.api.application.CdmApplicationDefaultConfiguration#setDataSource(javax.sql.DataSource)\r
- */\r
- @Override\r
- public void setDataSource(DataSource dataSource) { \r
- }\r
- \r
- /* (non-Javadoc)\r
- * @see eu.etaxonomy.cdm.api.application.CdmApplicationDefaultConfiguration#setTransactionManager(org.springframework.transaction.PlatformTransactionManager)\r
- */\r
- @Override\r
- public void setTransactionManager(PlatformTransactionManager transactionManager) { \r
- }\r
- \r
- /* (non-Javadoc)\r
- * @see eu.etaxonomy.cdm.api.application.CdmApplicationDefaultConfiguration#setSessionFactory(org.hibernate.SessionFactory)\r
- */\r
- @Override\r
- public void setSessionFactory(SessionFactory sessionFactory) { \r
+ throw new UnsupportedOperationException("commitTransaction is not implemented for CdmApplicationRemoteConfiguration");\r
+ }\r
+\r
+ @Override\r
+ public void authenticate(String username, String password){\r
+ UsernamePasswordAuthenticationToken tokenForUser = new UsernamePasswordAuthenticationToken(username, password);\r
+ Authentication authentication = this.getAuthenticationManager().authenticate(tokenForUser);\r
+ SecurityContext context = SecurityContextHolder.getContext();\r
+ context.setAuthentication(authentication);\r
+ }\r
+\r
+ public IIOService getIOService() {\r
+ return (IIOService) getService(IIOService.class, "/remoting/io.service", new CdmServiceRequestExecutor());\r
+ }\r
+\r
+ public ITestService getTestService() {\r
+ return (ITestService) getService(ITestService.class, "/remoting/test.service", new CdmServiceRequestExecutor());\r
}\r
}\r
/**
-* Copyright (C) 2014 EDIT
-* European Distributed Institute of Taxonomy
-* http://www.e-taxonomy.eu
-*
-* The contents of this file are subject to the Mozilla Public License Version 1.1
-* See LICENSE.TXT at the top of this package for the full license terms.
-*/
+ * Copyright (C) 2014 EDIT
+ * European Distributed Institute of Taxonomy
+ * http://www.e-taxonomy.eu
+ *
+ * The contents of this file are subject to the Mozilla Public License Version 1.1
+ * See LICENSE.TXT at the top of this package for the full license terms.
+ */
package eu.etaxonomy.cdm.api.application;
import java.util.List;
-import java.util.Properties;
import org.apache.log4j.Logger;
import org.hibernate.collection.internal.AbstractPersistentCollection;
import org.hibernate.proxy.AbstractLazyInitializer;
-import org.springframework.beans.MutablePropertyValues;
-import org.springframework.beans.factory.config.BeanDefinition;
-import org.springframework.beans.factory.xml.XmlBeanDefinitionReader;
import org.springframework.context.ApplicationListener;
-import org.springframework.context.support.PropertySourcesPlaceholderConfigurer;
import org.springframework.core.io.ClassPathResource;
import org.springframework.core.io.Resource;
+import eu.etaxonomy.cdm.api.service.ITestService;
import eu.etaxonomy.cdm.common.monitor.IProgressMonitor;
import eu.etaxonomy.cdm.common.monitor.NullProgressMonitor;
-import eu.etaxonomy.cdm.common.monitor.SubProgressMonitor;
-import eu.etaxonomy.cdm.remote.ICdmRemoteSource;
+import eu.etaxonomy.cdm.io.service.IIOService;
+import eu.etaxonomy.taxeditor.remoting.cache.CdmRemoteCacheManager;
+import eu.etaxonomy.taxeditor.remoting.source.ICdmRemoteSource;
+import eu.etaxonomy.taxeditor.service.ICachedCommonService;
+import eu.etaxonomy.taxeditor.session.ICdmEntitySessionManager;
/**
* CDM Application Controller class for remoting clients
- *
+ *
* FIXME:Remoting extending {@link CdmApplicationController} is a temporary workaround.
* The {@link CdmApplicationController} should be split into a CdmApplicationControllerBase
* class with {@link CdmApplicationController} and this class as subclasses
*
*/
public class CdmApplicationRemoteController extends CdmApplicationController {
-
+
private static final Logger logger = Logger.getLogger(CdmApplicationRemoteController.class);
- public static final Resource DEFAULT_REMOTE_APPLICATION_CONTEXT_RESOURCE =
- new ClassPathResource("/eu/etaxonomy/cdm/remotingApplicationContext.xml");
+
+ public static final Resource DEFAULT_REMOTE_APPLICATION_CONTEXT_RESOURCE =
+ new ClassPathResource("/eu/etaxonomy/cdm/remotingApplicationContext.xml");
private final Resource applicationContextResource;
private final IProgressMonitor progressMonitor;
-
+ private ICdmRemoteSource remoteSource;
+
+
/**
* Creates new instance of CdmApplicationRemoteController
- *
+ *
* @param applicationContextResource
* @param remoteSource
* @param omitTermLoading
* @param listeners
* @return
*/
- public static CdmApplicationRemoteController NewInstance(Resource applicationContextResource,
- ICdmRemoteSource remoteSource,
- boolean omitTermLoading,
- IProgressMonitor progressMonitor,
- List<ApplicationListener> listeners) {
- return new CdmApplicationRemoteController(applicationContextResource,
- remoteSource,
- omitTermLoading,
- progressMonitor,
- listeners);
-
- }
+// public static CdmApplicationRemoteController NewInstance(Resource applicationContextResource,
+// ICdmRemoteSource remoteSource,
+// IProgressMonitor progressMonitor,
+// List<ApplicationListener> listeners) {
+// return new CdmApplicationRemoteController(applicationContextResource,
+// remoteSource,
+// false,
+// progressMonitor,
+// listeners);
+//
+// }
/**
* Creates new instance of CdmApplicationRemoteController
- *
+ *
* @param applicationContextResource
* @param remoteSource
* @param omitTermLoading
* @param listeners
* @return
*/
- public static CdmApplicationRemoteController NewInstance(ICdmRemoteSource remoteSource,
- boolean omitTermLoading,
- IProgressMonitor progressMonitor,
- List<ApplicationListener> listeners) {
-
- return new CdmApplicationRemoteController(DEFAULT_REMOTE_APPLICATION_CONTEXT_RESOURCE,
- remoteSource,
- omitTermLoading,
- progressMonitor,
- listeners);
-
+ public static CdmApplicationRemoteController NewInstance(ICdmRemoteSource remoteSource,
+ IProgressMonitor progressMonitor,
+ List<ApplicationListener> listeners) {
+
+ return new CdmApplicationRemoteController(DEFAULT_REMOTE_APPLICATION_CONTEXT_RESOURCE,
+ remoteSource,
+ false,
+ progressMonitor,
+ listeners);
+
+ }
+
+ public static CdmApplicationRemoteController NewInstance(ICdmRemoteSource remoteSource,
+ boolean validateXml,
+ IProgressMonitor progressMonitor,
+ List<ApplicationListener> listeners) {
+
+ return new CdmApplicationRemoteController(DEFAULT_REMOTE_APPLICATION_CONTEXT_RESOURCE,
+ remoteSource,
+ validateXml,
+ progressMonitor,
+ listeners);
+
}
-
- /**
- * Constructs CdmApplicationRemoteController
- *
- * @param applicationContextResource
- * @param remoteSource
- * @param omitTermLoading
- * @param progressMonitor
- * @param listeners
- */
- private CdmApplicationRemoteController(Resource applicationContextResource,
- ICdmRemoteSource remoteSource,
- boolean omitTermLoading,
- IProgressMonitor progressMonitor,
-
List<ApplicationListener> listeners){
- logger.info("Start CdmApplicationRemoteController with remote source: " + remoteSource.getName());
- this.applicationContextResource =
- applicationContextResource != null ? applicationContextResource : DEFAULT_REMOTE_APPLICATION_CONTEXT_RESOURCE;
+
+ /**
+ * Constructs CdmApplicationRemoteController
+ *
+ * @param applicationContextResource
+ * @param remoteSource
+ * @param omitTermLoading
+ * @param progressMonitor
+ * @param listeners
+ */
+ private CdmApplicationRemoteController(Resource applicationContextResource,
+ ICdmRemoteSource remoteSource,
+ boolean validateXml,
+ IProgressMonitor progressMonitor,
+ List<ApplicationListener> listeners){
+ logger.info("Start CdmApplicationRemoteController with remote source: " + remoteSource.getName());
+ this.applicationContextResource =
+ applicationContextResource != null ? applicationContextResource : DEFAULT_REMOTE_APPLICATION_CONTEXT_RESOURCE;
this.progressMonitor = progressMonitor != null ? progressMonitor : new NullProgressMonitor();
+ this.remoteSource = remoteSource;
+ setNewRemoteSource(remoteSource, validateXml, listeners);
+
+ }
+
+
- setNewRemoteSource(remoteSource, omitTermLoading, listeners);
-
- }
-
-
-
/**
* Creates and starts a new spring application context
- *
+ *
* @param remoteSource object for connecting to an http-invoker server
* @param omitTermLoading
* @param listeners
* @return
*/
- protected boolean setNewRemoteSource(ICdmRemoteSource remoteSource,
- boolean omitTermLoading,
-
List<ApplicationListener> listeners){
+ public boolean setNewRemoteSource(ICdmRemoteSource remoteSource,
+ boolean validateXml,
+ List<ApplicationListener> listeners){
logger.info("Connecting to '" + remoteSource.getName() + "'");
- MonitoredGenericApplicationContext applicationContext = new MonitoredGenericApplicationContext();
- int refreshTasks = 45;
- int nTasks = 5 + refreshTasks;
+ int nTasks = 2;
progressMonitor.beginTask("Connecting to '" + remoteSource.getName() + "'", nTasks);
- progressMonitor.subTask("Registering remote source.");
- PropertySourcesPlaceholderConfigurer pspc = new PropertySourcesPlaceholderConfigurer();
- Properties properties = new Properties();
- properties.setProperty("remoteServer", remoteSource.getServer());
- properties.setProperty("remotePort", String.valueOf(remoteSource.getPort()));
- properties.setProperty("remoteContext", remoteSource.getContextPath());
- pspc.setProperties(properties);
- applicationContext.addBeanFactoryPostProcessor(pspc);
- progressMonitor.worked(1);
-
- XmlBeanDefinitionReader xmlReader = new XmlBeanDefinitionReader(applicationContext);
- //xmlReader.setValidationMode(XmlBeanDefinitionReader.VALIDATION_NONE);
- progressMonitor.subTask("Registering resources.");
- xmlReader.loadBeanDefinitions(applicationContextResource);
+ progressMonitor.subTask("Initialising CDM Model Cache ...");
+ CdmRemoteCacheManager.getInstance();
progressMonitor.worked(1);
-
- //omitTerms
- if (omitTermLoading == true){
- String initializerName = "persistentTermInitializer";
- BeanDefinition beanDef = applicationContext.getBeanDefinition(initializerName);
- MutablePropertyValues values = beanDef.getPropertyValues();
- values.addPropertyValue("omit", omitTermLoading);
- }
-
- if (listeners != null){
- for(ApplicationListener listener : listeners){
- applicationContext.addApplicationListener(listener);
- }
- }
-
-
- applicationContext.refresh(new SubProgressMonitor(progressMonitor, refreshTasks));
- applicationContext.start();
-
- progressMonitor.subTask("Cleaning up.");
- setApplicationContext(applicationContext);
+ progressMonitor.subTask("Starting application context ...");
+ init();
progressMonitor.worked(1);
-
progressMonitor.done();
return true;
}
-
+
+
+
/* (non-Javadoc)
* @see eu.etaxonomy.cdm.api.application.CdmApplicationController#init()
*/
@Override
- protected void init(){
- configuration = (ICdmApplicationConfiguration)applicationContext.getBean("cdmApplicationRemoteConfiguration");
- AbstractLazyInitializer.setConfiguration(this);
- AbstractPersistentCollection.setConfiguration(this);
+ protected void init(){
+ configuration = new CdmApplicationRemoteConfiguration(remoteSource);
+ ((CdmApplicationRemoteConfiguration)configuration).setApplicationContext(applicationContext);
+ AbstractLazyInitializer.setConfiguration((CdmApplicationRemoteConfiguration)configuration);
+ AbstractPersistentCollection.setConfiguration((CdmApplicationRemoteConfiguration)configuration);
+ }
+ public ICdmEntitySessionManager getCdmEntitySessionManager() {
+ return ((CdmApplicationRemoteConfiguration)configuration).getCdmEntitySessionManager();
}
+ public IIOService getIOService(){
+ return ((CdmApplicationRemoteConfiguration)configuration).getIOService();
+ }
+
+ public ITestService getTestService(){
+ return ((CdmApplicationRemoteConfiguration)configuration).getTestService();
+ }
+
+ public ICachedCommonService getCachedCommonService(){
+ return ((CdmApplicationRemoteConfiguration)configuration).getCachedCommonService();
+ }
}
--- /dev/null
+// $Id$
+/**
+* Copyright (C) 2015 EDIT
+* European Distributed Institute of Taxonomy
+* http://www.e-taxonomy.eu
+*
+* The contents of this file are subject to the Mozilla Public License Version 1.1
+* See LICENSE.TXT at the top of this package for the full license terms.
+*/
+package eu.etaxonomy.cdm.api.application;
+
+import java.lang.reflect.InvocationTargetException;
+import java.lang.reflect.Method;
+import java.lang.reflect.Type;
+
+import org.springframework.security.core.context.SecurityContext;
+
+import eu.etaxonomy.cdm.api.cache.CdmServiceCacher;
+import eu.etaxonomy.cdm.api.service.ICommonService;
+import eu.etaxonomy.cdm.api.service.IService;
+import eu.etaxonomy.cdm.api.service.ITestService;
+import eu.etaxonomy.cdm.io.service.IIOService;
+import eu.etaxonomy.taxeditor.service.ICachedCommonService;
+
+/**
+ * @author cmathew
+ * @date 17 Jun 2015
+ *
+ */
+public class CdmApplicationState {
+
+ private static CdmApplicationState cdmApplicationState;
+
+ private ICdmApplicationConfiguration appConfig;
+
+ private ICdmDataChangeService dataChangeService;
+
+ private SecurityContext securityContext;
+
+ private static CdmServiceCacher cdmServiceCacher;
+
+
+ public static CdmApplicationState getInstance() {
+ if(cdmApplicationState == null) {
+ cdmApplicationState = new CdmApplicationState();
+ }
+
+ return cdmApplicationState;
+ }
+
+ public void setAppConfig(ICdmApplicationConfiguration appConfig) {
+ this.appConfig = appConfig;
+ }
+
+ public ICdmApplicationConfiguration getAppConfig() {
+ return appConfig;
+ }
+
+ public static void setCurrentAppConfig(ICdmApplicationConfiguration appConfig) {
+ getInstance().setAppConfig(appConfig);
+ }
+
+ public static ICdmApplicationConfiguration getCurrentAppConfig() {
+ return getInstance().getAppConfig();
+ }
+
+ /**
+ * @return the dataChangeService
+ */
+ public ICdmDataChangeService getDataChangeService() {
+ return dataChangeService;
+ }
+
+ /**
+ * @param dataChangeService the dataChangeService to set
+ */
+ public void setDataChangeService(ICdmDataChangeService dataChangeService) {
+ this.dataChangeService = dataChangeService;
+ }
+
+ public static ICdmDataChangeService getCurrentDataChangeService() {
+ return getInstance().getDataChangeService();
+ }
+
+ public static void setCurrentDataChangeService(ICdmDataChangeService dataChangeService) {
+ getInstance().setDataChangeService(dataChangeService);
+ }
+
+
+
+ /**
+ * @return the securityContext
+ */
+ public SecurityContext getSecurityContext() {
+ return securityContext;
+ }
+
+ /**
+ * @param securityContext the securityContext to set
+ */
+ public void setSecurityContext(SecurityContext securityContext) {
+ this.securityContext = securityContext;
+ }
+
+ /**
+ * @return the securityContext
+ */
+ public static SecurityContext getCurrentSecurityContext() {
+ return getInstance().getSecurityContext();
+ }
+
+ /**
+ * @param securityContext the securityContext to set
+ */
+ public static void setCurrentSecurityContext(SecurityContext securityContext) {
+ getInstance().setSecurityContext(securityContext);
+ }
+
+ public static void dispose() {
+ getInstance().setCurrentDataChangeService(null);
+ getInstance().setAppConfig(null);
+ getInstance().setSecurityContext(null);
+ cdmApplicationState = null;
+ cdmServiceCacher = null;
+ }
+
+
+ /**
+ * Generic method that will scan the getters of {@link ICdmApplicationConfiguration} for the given service
+ * interface. If a matching getter is found the according service implementation is returned by
+ * invoking the getter otherwise the method returns <code>null</code>.
+ *
+ * @param <T>
+ * @param serviceClass
+ * @return the configured implementation of <code>serviceClass</code> or <code>null</code>
+ * @throws CdmApplicationException
+ */
+ public static <T extends IService> T getService(Class<T> serviceClass) throws CdmApplicationException {
+ ICdmApplicationConfiguration configuration = getCurrentAppConfig();
+
+ Method[] methods = ICdmApplicationConfiguration.class.getDeclaredMethods();
+
+ T service = null;
+
+ for (Method method : methods) {
+ Type type = method.getGenericReturnType();
+
+ if (type.equals(serviceClass)) {
+ try {
+ service = (T) method.invoke(configuration, null);
+ break;
+ } catch (IllegalArgumentException iae) {
+ throw new CdmApplicationException(iae);
+ } catch (IllegalAccessException iae) {
+ throw new CdmApplicationException(iae);
+ } catch (InvocationTargetException ite) {
+ throw new CdmApplicationException(ite);
+ }
+ }
+ }
+
+ return service;
+ }
+
+
+ /**
+ * @see #getService(Class)
+ * As ICommonService is not extending IService we need a specific request here
+ */
+ public static ICommonService getCommonService() {
+ ICdmApplicationConfiguration configuration = getCurrentAppConfig();
+
+ return configuration.getCommonService();
+
+ }
+
+ public static IIOService getIOService() {
+ ICdmApplicationConfiguration configuration = getCurrentAppConfig();
+
+ return ((CdmApplicationRemoteController)configuration).getIOService();
+
+ }
+
+
+ public static ITestService getTestService() {
+ ICdmApplicationConfiguration configuration = getCurrentAppConfig();
+
+ return ((CdmApplicationRemoteController)configuration).getTestService();
+
+ }
+
+ public static ICachedCommonService getCachedCommonService() {
+ ICdmApplicationConfiguration configuration = getCurrentAppConfig();
+
+ return ((CdmApplicationRemoteController)configuration).getCachedCommonService();
+
+ }
+
+ public static CdmServiceCacher getCdmServiceCacher() {
+ return cdmServiceCacher;
+ }
+
+ public static void setCdmServiceCacher(CdmServiceCacher cacher) {
+ cdmServiceCacher = cacher;
+ }
+
+
+}
--- /dev/null
+// $Id$
+/**
+* Copyright (C) 2015 EDIT
+* European Distributed Institute of Taxonomy
+* http://www.e-taxonomy.eu
+*
+* The contents of this file are subject to the Mozilla Public License Version 1.1
+* See LICENSE.TXT at the top of this package for the full license terms.
+*/
+package eu.etaxonomy.cdm.api.application;
+
+import java.util.HashSet;
+import java.util.Set;
+
+import eu.etaxonomy.cdm.model.common.CdmBase;
+
+/**
+ * @author cmathew
+ * @date 7 Apr 2015
+ *
+ */
+public class CdmChangeEvent {
+
+ public enum Action {
+ Create,
+ Update,
+ Delete
+ }
+
+ private final Action action;
+ private final Set<CdmBase> changedObjects;
+ private final Class sourceType;
+ private Class entityType;
+ private Object source;
+
+ public CdmChangeEvent(Action action, Set<CdmBase> changedObjects, Class sourceType) {
+ this.action = action;
+ this.changedObjects = changedObjects;
+ this.sourceType = sourceType;
+ }
+
+ public CdmChangeEvent(Action action, CdmBase changedObject, Class sourceType) {
+ this.action = action;
+ changedObjects = new HashSet<CdmBase>();
+ changedObjects.add(changedObject);
+ this.sourceType = sourceType;
+ }
+
+ public CdmChangeEvent(Action action, Set<CdmBase> changedObjects, Class sourceType, Class entityType) {
+ this(action, changedObjects, sourceType);
+ this.entityType = entityType;
+ }
+
+ public CdmChangeEvent(Action action, Set<CdmBase> changedObjects, Object source) {
+ this(action, changedObjects, source.getClass());
+ this.source = source;
+ }
+
+ /**
+ * @return the action
+ */
+ public Action getAction() {
+ return action;
+ }
+
+ /**
+ * @return the changedObjects
+ */
+ public Set<? extends CdmBase> getChangedObjects() {
+ return changedObjects;
+ }
+
+ /**
+ * @return the sourceType
+ */
+ public Class getSourceType() {
+ return sourceType;
+ }
+
+
+ /**
+ * @return the source
+ */
+ public Object getSource() {
+ return source;
+ }
+
+ public Class getEntityType() {
+ return entityType;
+ }
+
+ public boolean hasChanges() {
+ return changedObjects != null && !changedObjects.isEmpty();
+ }
+
+}
--- /dev/null
+// $Id$
+/**
+ * Copyright (C) 2015 EDIT
+ * European Distributed Institute of Taxonomy
+ * http://www.e-taxonomy.eu
+ *
+ * The contents of this file are subject to the Mozilla Public License Version 1.1
+ * See LICENSE.TXT at the top of this package for the full license terms.
+ */
+package eu.etaxonomy.cdm.api.application;
+
+import java.util.ArrayList;
+import java.util.HashSet;
+import java.util.List;
+import java.util.Set;
+
+/**
+ * @author cmathew
+ * @date 18 Jun 2015
+ *
+ */
+public class CdmDataChangeService implements ICdmDataChangeService {
+
+ protected final Set<ICdmChangeListener> listeners;
+
+ private final List<CdmChangeEvent> currentEvents;
+
+ public CdmDataChangeService() {
+ listeners = new HashSet<ICdmChangeListener>();
+ currentEvents = new ArrayList<CdmChangeEvent>();
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.store.ICdmDataChangeService#register(eu.etaxonomy.cdm.api.application.ICdmChangeListener)
+ */
+ @Override
+ public void register(ICdmChangeListener listener) {
+ listeners.add(listener);
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.cdm.api.application.ICdmDataChangeService#unregister(eu.etaxonomy.cdm.api.application.ICdmChangeListener)
+ */
+ @Override
+ public void unregister(ICdmChangeListener listener) {
+ listeners.remove(listener);
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.store.ICdmDataChangeService#addEvent(eu.etaxonomy.cdm.api.application.CdmChangeEvent)
+ */
+ @Override
+ public void addEvent(CdmChangeEvent event) {
+ currentEvents.add(event);
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.store.ICdmDataChangeService#fireCurrentChangeEvents(boolean)
+ */
+ @Override
+ public void fireCurrentChangeEvents(boolean async) {
+ try {
+ for(CdmChangeEvent event : currentEvents) {
+ fireChangeEvent(event,async);
+ }
+ } finally {
+ currentEvents.clear();
+ }
+ }
+
+
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.store.ICdmDataChangeService#fireChangeEvent(eu.etaxonomy.cdm.api.application.CdmChangeEvent, boolean)
+ */
+ @Override
+ public void fireChangeEvent(final CdmChangeEvent event, boolean async) {
+
+ for(final ICdmChangeListener listener : listeners) {
+ listener.onChange(event);
+ }
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.store.ICdmDataChangeService#clear()
+ */
+ @Override
+ public void clear() {
+ listeners.clear();
+ currentEvents.clear();
+ }
+
+
+}
--- /dev/null
+// $Id$
+/**
+* Copyright (C) 2015 EDIT
+* European Distributed Institute of Taxonomy
+* http://www.e-taxonomy.eu
+*
+* The contents of this file are subject to the Mozilla Public License Version 1.1
+* See LICENSE.TXT at the top of this package for the full license terms.
+*/
+package eu.etaxonomy.cdm.api.application;
+
+/**
+ * @author cmathew
+ * @date 7 Apr 2015
+ *
+ */
+public interface ICdmChangeListener {
+
+ public void onChange(CdmChangeEvent event);
+
+}
--- /dev/null
+// $Id$
+/**
+ * Copyright (C) 2015 EDIT
+ * European Distributed Institute of Taxonomy
+ * http://www.e-taxonomy.eu
+ *
+ * The contents of this file are subject to the Mozilla Public License Version 1.1
+ * See LICENSE.TXT at the top of this package for the full license terms.
+ */
+package eu.etaxonomy.cdm.api.application;
+
+
+/**
+ * @author cmathew
+ * @date 18 Jun 2015
+ *
+ */
+public interface ICdmDataChangeService {
+
+ public abstract void register(ICdmChangeListener listener);
+
+ public abstract void unregister(ICdmChangeListener listener);
+
+ public abstract void addEvent(CdmChangeEvent event);
+
+ public abstract void fireCurrentChangeEvents(boolean async);
+
+ public abstract void fireChangeEvent(CdmChangeEvent event, boolean async);
+
+ public abstract void clear();
+
+}
\ No newline at end of file
import java.util.UUID;
-import org.springframework.beans.factory.annotation.Autowired;
+import net.sf.ehcache.config.CacheConfiguration;
+import net.sf.ehcache.config.SizeOfPolicyConfiguration;
+
import org.springframework.stereotype.Component;
-import eu.etaxonomy.cdm.api.service.ITermService;
+import eu.etaxonomy.cdm.api.application.CdmApplicationState;
import eu.etaxonomy.cdm.model.common.CdmBase;
+import eu.etaxonomy.cdm.model.common.DefinedTermBase;
+import eu.etaxonomy.taxeditor.remoting.cache.CacheLoader;
+import eu.etaxonomy.taxeditor.remoting.cache.CdmEntityCacheKey;
+import eu.etaxonomy.taxeditor.remoting.cache.CdmTransientEntityCacher;
+import eu.etaxonomy.taxeditor.service.TermServiceRequestExecutor;
+import eu.etaxonomy.taxeditor.session.CdmEntitySession;
+import eu.etaxonomy.taxeditor.session.ICdmEntitySession;
+import eu.etaxonomy.taxeditor.session.ICdmEntitySessionManager;
+import eu.etaxonomy.taxeditor.session.ICdmEntitySessionManagerObserver;
/**
* Class which uses CDM services to cache cdm entities
* @param <T>
*/
@Component
-public class CdmServiceCacher<T extends CdmBase> extends CdmCacher {
+public class CdmServiceCacher extends CdmCacher implements ICdmEntitySessionManagerObserver {
- @Autowired
- ITermService termService;
- @Override
- protected T findByUuid(UUID uuid) {
- return (T)termService.findWithoutFlush(uuid);
- }
- /* (non-Javadoc)
- * @see eu.etaxonomy.cdm.api.cache.CdmCacher#setup()
- */
+ private ICdmEntitySessionManager cdmEntitySessionManager;
+
+ private CdmTransientEntityCacher cdmTransientEntityCacher;
+
+ private CacheLoader cacheLoader;
+
@Override
protected void setup() {
- // TODO Auto-generated method stub
+ DefinedTermBase.setCacher(this);
+ CdmTransientEntityCacher.setDefaultCacher(this);
+ TermServiceRequestExecutor.setDefaultCacher(this);
+ cacheLoader = new CacheLoader(this);
+ }
+
+
+ @Override
+ protected CacheConfiguration getDefaultCacheConfiguration() {
+ // For a better understanding on how to size caches, refer to
+ // http://ehcache.org/documentation/configuration/cache-size
+
+ SizeOfPolicyConfiguration sizeOfConfig = new SizeOfPolicyConfiguration();
+ sizeOfConfig.setMaxDepth(100);
+ sizeOfConfig.setMaxDepthExceededBehavior("abort");
+
+ return new CacheConfiguration(DEFAULT_CACHE_NAME, 0)
+ .eternal(true)
+ .statistics(true)
+ .sizeOfPolicy(sizeOfConfig)
+ .overflowToOffHeap(false);
+
+ }
+
+ @Override
+ protected CdmBase findByUuid(UUID uuid) {
+ CdmBase term = CdmApplicationState.getCurrentAppConfig().getTermService().findWithoutFlush(uuid);
+ return load(term);
}
/* (non-Javadoc)
* @see eu.etaxonomy.cdm.model.ICdmCacher#isCachable(eu.etaxonomy.cdm.model.common.CdmBase)
*/
@Override
- public boolean isCachable(CdmBase arg0) {
- // TODO Auto-generated method stub
+ public boolean isCachable(CdmBase cdmEntity) {
+ if(cdmEntity != null && cdmEntity instanceof DefinedTermBase) {
+ return true;
+ }
return false;
}
+
+ public void setCdmEntitySessionManager(ICdmEntitySessionManager cdmEntitySessionManager) {
+ this.cdmEntitySessionManager = cdmEntitySessionManager;
+ if(cdmEntitySessionManager != null) {
+ cdmEntitySessionManager.addSessionObserver(this);
+ }
+ }
+
+
+ public CdmTransientEntityCacher getCurrentCacher() {
+ ICdmEntitySession cdmEntitySession = cdmEntitySessionManager.getActiveSession();
+ if(cdmEntitySession != null && cdmEntitySession instanceof CdmEntitySession) {
+ return ((CdmEntitySession) cdmEntitySession).getCacher();
+ }
+ return null;
+ }
+
+ @Override
+ public CdmBase getFromCache(CdmBase cdmBase) {
+ CdmBase cachedCdmEntity = null;
+ // first we check in the active session cache if the
+ // entity has been loaded there
+ // FIXME:Remoting do we really need the cdmTransientEntityCacher
+ // here. Is it not guarenteed that all every entity which 'isCachable'
+ // by this cacher is cached only in this cacher ?
+ if(!isCachable(cdmBase) && cdmTransientEntityCacher != null) {
+ CdmEntityCacheKey key = CdmTransientEntityCacher.generateKey(cdmBase);
+ cachedCdmEntity = cdmTransientEntityCacher.getFromCache(key);
+
+ }
+ if(cachedCdmEntity == null) {
+ cachedCdmEntity = super.getFromCache(cdmBase);
+ }
+ return cachedCdmEntity;
+ }
+
+
/* (non-Javadoc)
* @see eu.etaxonomy.cdm.api.cache.CdmCacher#load(eu.etaxonomy.cdm.model.common.CdmBase)
*/
@Override
- public CdmBase load(CdmBase arg0) {
- // TODO Auto-generated method stub
- return null;
+ public CdmBase load(CdmBase cdmEntity) {
+ CdmBase cachedCdmEntity = getFromCache(cdmEntity.getUuid());
+
+ if(isCachable(cdmEntity) && cachedCdmEntity == null) {
+ cachedCdmEntity = cacheLoader.load(cdmEntity, false, true);
+ }
+ return cachedCdmEntity;
}
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySessionManagerObserver#changed()
+ */
+ @Override
+ public void changed() {
+ ICdmEntitySession cdmEntitySession = cdmEntitySessionManager.getActiveSession();
+ if(cdmEntitySession != null && cdmEntitySession instanceof CdmEntitySession) {
+ this.cdmTransientEntityCacher = ((CdmEntitySession) cdmEntitySession).getCacher();
+ } else {
+ this.cdmTransientEntityCacher = null;
+ }
+ }
}
--- /dev/null
+package eu.etaxonomy.taxeditor.remoting;
+
+public class CdmEagerLoadingException extends RuntimeException {
+
+ public CdmEagerLoadingException(Throwable t) {
+ super(t);
+ }
+
+ public CdmEagerLoadingException(String message) {
+ super(message);
+ }
+
+}
--- /dev/null
+package eu.etaxonomy.taxeditor.remoting;
+
+public class CdmRemotingException extends RuntimeException {
+
+ /**
+ *
+ */
+ private static final long serialVersionUID = -560332689478356360L;
+
+ public CdmRemotingException(String message) {
+ super(message);
+ }
+
+ public CdmRemotingException(Exception exception) {
+ super(exception);
+ }
+
+}
--- /dev/null
+// $Id$
+/**
+ * Copyright (C) 2015 EDIT
+ * European Distributed Institute of Taxonomy
+ * http://www.e-taxonomy.eu
+ *
+ * The contents of this file are subject to the Mozilla Public License Version 1.1
+ * See LICENSE.TXT at the top of this package for the full license terms.
+ */
+package eu.etaxonomy.taxeditor.remoting.cache;
+
+import java.lang.reflect.Field;
+import java.util.ArrayList;
+import java.util.Collection;
+import java.util.Iterator;
+import java.util.List;
+import java.util.Map;
+
+import net.sf.ehcache.Cache;
+import net.sf.ehcache.Element;
+
+import org.apache.log4j.Logger;
+import org.springframework.util.ReflectionUtils;
+
+import eu.etaxonomy.cdm.api.service.pager.Pager;
+import eu.etaxonomy.cdm.model.ICdmCacher;
+import eu.etaxonomy.cdm.model.common.CdmBase;
+
+/**
+ * @author cmathew
+ * @date 19 Feb 2015
+ *
+ */
+public class CacheLoader {
+ private static final Logger logger = Logger.getLogger(CacheLoader.class);
+
+ private static boolean isRecursiveEnabled = true;
+
+ protected final ICdmCacher cdmCacher;
+
+ private final Cache cdmlibModelCache;
+
+
+
+ public CacheLoader(ICdmCacher cdmCacher) {
+ this.cdmCacher = cdmCacher;
+ this.cdmlibModelCache = CdmRemoteCacheManager.getInstance().getCdmModelGetMethodsCache();
+
+ }
+
+
+ public CdmModelFieldPropertyFromClass getFromCdmlibModelCache(String className) {
+ Element e = cdmlibModelCache.get(className);
+ if (e == null) {
+ return null;
+ } else {
+ return (CdmModelFieldPropertyFromClass) e.getObjectValue();
+ }
+ }
+
+ @SuppressWarnings("unchecked")
+ public <T extends Object> T load(T obj, boolean recursive, boolean update) {
+ if(obj == null) {
+ return null;
+ }
+ if(obj instanceof CdmBase) {
+ return (T) load((CdmBase)obj, recursive, update);
+ } else if (obj instanceof Map) {
+ return (T) load((Map<T,T>)obj, recursive, update);
+ } else if (obj instanceof Collection) {
+ return (T) load((Collection<T>)obj, recursive, update);
+ } else if(obj instanceof Pager) {
+ load(((Pager)obj).getRecords(), recursive, update);
+ return obj;
+ }
+
+ return obj;
+ }
+
+ @SuppressWarnings("unchecked")
+ private <T extends Object> T loadRecursive(T obj, List<Object> alreadyVisitedEntities, boolean update) {
+ if(obj == null) {
+ return null;
+ }
+ if(obj instanceof CdmBase) {
+ return (T) loadRecursive((CdmBase)obj, alreadyVisitedEntities, update);
+ } else if (obj instanceof Map) {
+ return (T) load((Map<T,T>)obj, alreadyVisitedEntities, update);
+ } else if (obj instanceof Collection) {
+ return (T) load((Collection<T>)obj, alreadyVisitedEntities, update);
+ }
+
+
+ logger.info("No caching yet for type " + obj.getClass().getName());
+
+ return obj;
+ }
+
+ public <T extends Object> Map<T,T> load(Map<T,T> map, boolean recursive, boolean update){
+
+
+ if(isRecursiveEnabled && recursive) {
+ logger.info("---- starting recursive load for cdm entity map");
+ List<Object> alreadyVisitedEntities = new ArrayList<Object>();
+ Map<T,T> cachedMap = load(map, alreadyVisitedEntities, update);
+ alreadyVisitedEntities.clear();
+ logger.info("---- ending recursive load for cdm entity map \n");
+ return cachedMap;
+ } else {
+ return load(map, null, update);
+ }
+ }
+
+
+ private <T extends Object> Map<T,T> load(Map<T,T> map, List<Object> alreadyVisitedEntities, boolean update){
+ //map = (Map<T,T>)deproxy(map);
+
+ if(map == null || map.isEmpty()) {
+ return map;
+ }
+
+ int originalMapSize = map.size();
+ Object[] result = new Object[ map.size() * 2 ];
+ Iterator<Map.Entry<T,T>> iter = map.entrySet().iterator();
+ int i=0;
+ // to avoid ConcurrentModificationException
+ alreadyVisitedEntities.add(map);
+ while ( iter.hasNext() ) {
+ Map.Entry<T,T> e = iter.next();
+ result[i++] = e.getKey();
+ result[i++] = e.getValue();
+ }
+
+ for(i=0; i<result.length;i++) {
+ if(alreadyVisitedEntities == null) {
+ result[i] = load(result[i], false, update);
+ } else {
+ result[i] = loadRecursive(result[i], alreadyVisitedEntities, update);
+ }
+ }
+ map.clear();
+ for(i = 0; i < originalMapSize; i+=2 ) {
+ map.put(
+ (T)result[i],
+ (T)result[i+1]
+ );
+ }
+ return map;
+ }
+
+ public <T extends Object> Collection<T> load(Collection<T> collection, boolean recursive, boolean update){
+
+ Collection<T> loadedCollection;
+ if(isRecursiveEnabled && recursive) {
+ logger.info("---- starting recursive load for cdm entity collection");
+ List<Object> alreadyVisitedEntities = new ArrayList<Object>();
+ Collection<T> cachedCollection = load(collection, alreadyVisitedEntities, update);
+ alreadyVisitedEntities.clear();
+ logger.info("---- ending recursive load for cdm entity collection \n");
+ loadedCollection = cachedCollection;
+ } else {
+ loadedCollection = load(collection, null, update);
+ }
+ return loadedCollection;
+ }
+
+ @SuppressWarnings("unchecked")
+ private <T extends Object> Collection<T> load(Collection<T> collection, List<Object> alreadyVisitedEntities, boolean update) {
+
+
+
+ if(collection == null || collection.isEmpty()) {
+ return collection;
+ }
+ int length = collection.size();
+ Object[] result = new Object[length];
+ Iterator<T> collectionItr = collection.iterator();
+ int count = 0;
+ // to avoid ConcurrentModificationException
+ alreadyVisitedEntities.add(collection);
+ while(collectionItr.hasNext()) {
+ Object obj = collectionItr.next();
+ if(alreadyVisitedEntities == null) {
+ result[count] = load(obj, false, update);
+ } else {
+ result[count] = loadRecursive(obj, alreadyVisitedEntities, update);
+ }
+
+ count++;
+ }
+
+ collection.clear();
+
+ for ( int i = 0; i < length; i++ ) {
+ collection.add((T)result[i]);
+ }
+
+ return collection;
+ }
+
+
+ /**
+ * Puts the (Key,Value) pair of ({@link java.util.UUID}, {@link eu.etaxonomy.cdm.model.common.CdmBase}),
+ * in the cache corresponding to the given cache id
+ *
+ * @param cacheId
+ * @param uuid
+ * @param cdmEntity
+ */
+ public CdmBase load(CdmBase cdmEntity, boolean recursive, boolean update) {
+ if(cdmEntity == null) {
+ return null;
+ }
+
+ // start by looking up the cdm entity in the cache
+ CdmBase cachedCdmEntity = cdmCacher.getFromCache(cdmEntity);
+
+ if(cachedCdmEntity != null) {
+ // if cdm entity was found in cache then
+ logger.info(" - object of type " + cdmEntity.getClass().getName() + " with id " + cdmEntity.getId() + " already exists");
+ // .. return if the cached and input objects are identical, else (this is a newly loaded object so) continue
+ if(cachedCdmEntity == cdmEntity) {
+ return cachedCdmEntity;
+ }
+ }
+
+ CdmBase loadedCdmBase;
+ if(isRecursiveEnabled && recursive) {
+ logger.info("---- starting recursive load for cdm entity " + cdmEntity.getClass().getName() + " with id " + cdmEntity.getId());
+ List<Object> alreadyVisitedEntities = new ArrayList<Object>();
+ CdmBase cb = loadRecursive(cdmEntity, alreadyVisitedEntities, update);
+ alreadyVisitedEntities.clear();
+ logger.info("---- ending recursive load for cdm entity " + cdmEntity.getClass().getName() + " with id " + cdmEntity.getId() + "\n");
+ loadedCdmBase = cb;
+ } else {
+ loadedCdmBase = load(cdmEntity);
+ }
+ return loadedCdmBase;
+
+ }
+
+
+ protected CdmBase load(CdmBase cdmEntity) {
+ logger.info("loading object of type " + cdmEntity.getClass().getName() + " with id " + cdmEntity.getId());
+ cdmCacher.put((CdmBase)ProxyUtils.deproxy(cdmEntity));
+ return cdmCacher.getFromCache(cdmEntity);
+ }
+
+
+ private CdmBase loadRecursive(CdmBase cdmEntity, List<Object> alreadyVisitedEntities, boolean update) {
+
+ CdmBase cachedCdmEntity = load(cdmEntity);
+
+
+ // we want to recursive through the cdmEntity (and not the cachedCdmEntity)
+ // since there could be new or deleted objects in the cdmEntity sub-graph
+
+ // start by getting the fields from the cdm entity
+ String className = cdmEntity.getClass().getName();
+ CdmModelFieldPropertyFromClass cmgmfc = getFromCdmlibModelCache(className);
+ if(cmgmfc != null) {
+ alreadyVisitedEntities.add(cdmEntity);
+ List<String> fields = cmgmfc.getFields();
+ for(String field : fields) {
+ // retrieve the actual object corresponding to the field.
+ // this object will be either a CdmBase or a Collection / Map
+ // with CdmBase as the generic type
+
+ CdmBase cdmEntityInSubGraph = getCdmBaseTypeFieldValue(cdmEntity, cachedCdmEntity, field, alreadyVisitedEntities, update);
+ if(cdmEntityInSubGraph != null) {
+ //checkForIdenticalCdmEntity(alreadyVisitedEntities, cdmEntityInSubGraph);
+ if(!checkForIdenticalCdmEntity(alreadyVisitedEntities, cdmEntityInSubGraph)) {
+ logger.info("recursive loading object of type " + cdmEntityInSubGraph.getClass().getName() + " with id " + cdmEntityInSubGraph.getId());
+ loadRecursive(cdmEntityInSubGraph, alreadyVisitedEntities, update);
+ } else {
+ logger.info("object of type " + cdmEntityInSubGraph.getClass().getName() + " with id " + cdmEntityInSubGraph.getId() + " already visited");
+ }
+ }
+ }
+ } else {
+ throw new CdmClientCacheException("CdmEntity with class " + cdmEntity.getClass().getName() + " is not found in the cdmlib model cache. " +
+ "The cache may be corrupted or not in sync with the latest model version" );
+ }
+
+ return cachedCdmEntity;
+ }
+
+
+ private CdmBase getCdmBaseTypeFieldValue(CdmBase cdmEntity,
+ CdmBase cachedCdmEntity,
+ String fieldName,
+ List<Object> alreadyVisitedEntities,
+ boolean update) {
+
+ // this method attempts to make sure that for any two objects found in
+ // the object graph, if they are equal then they should also be the same,
+ // which is crucial for the merge to work
+ if(cachedCdmEntity == null) {
+ throw new CdmClientCacheException("When trying to set field value, the cached cdm entity cannot be null");
+ }
+
+ Class<?> clazz = cdmEntity.getClass();
+ try {
+ // this call will search in the provided class as well as
+ // the super classes until it finds the field
+ Field field = ReflectionUtils.findField(clazz, fieldName);
+
+ if(field == null) {
+ throw new CdmClientCacheException("Field '" + fieldName
+ + "' not found when searching in class '" + clazz.getName() + "' and its supercalsses");
+ }
+ field.setAccessible(true);
+ Object o = field.get(cdmEntity);
+ // resetting the value in cdm entity to the deproxied object
+ o = ProxyUtils.deproxy(o);
+ field.set(cdmEntity, o);
+ Object cachedo = field.get(cachedCdmEntity);
+ CdmBase cdmEntityInSubGraph = null;
+
+ if(update || ProxyUtils.isProxy(cachedo)) {
+ // if we are in update mode we have to make the field of the cached entity
+ // up-to-date by setting it to the value of the cdm entity being loaded
+ //
+ // if the cdm entity is a proxy then we always update to make sure that
+ // newly created entities are always up-to-date
+ //
+ // NOTE : the field is overridden in the case of the exception
+ // found below
+ field.set(cachedCdmEntity, o);
+
+ }
+
+ if(o != null && !ProxyUtils.isProxy(o)) {
+ if(CdmBase.class.isAssignableFrom(o.getClass())) {
+ logger.info("found initialised cdm entity '" + fieldName + "' in object of type " + clazz.getName() + " with id " + cdmEntity.getId());
+
+ cdmEntityInSubGraph = (CdmBase)o;
+ CdmBase cachedCdmEntityInSubGraph = cdmCacher.getFromCache(cdmEntityInSubGraph);
+
+ if(cachedCdmEntityInSubGraph != null) {
+ if(cachedCdmEntityInSubGraph != cdmEntityInSubGraph) {
+ // exception : is the case where
+ // the field has been already initialised, cached and
+ // is not the same as the one in the cache, in which case we set the value
+ // of the field to the one found in the cache
+ logger.info("setting cached + real value to '" + fieldName + "' in object of type " + clazz.getName() + " with id " + cdmEntity.getId());
+ field.set(cachedCdmEntity, cachedCdmEntityInSubGraph);
+ field.set(cdmEntity, cachedCdmEntityInSubGraph);
+ } else {
+ // since the field value object in cdmEntity
+ // is the same as the field value object in cachedCdmEntity
+ // we are sure that the its subgraph is also correctly loaded,
+ // so we can exit the recursion
+ return null;
+ }
+ }
+ } else if(o instanceof Map && !checkForIdenticalCdmEntity(alreadyVisitedEntities, o)) {
+ loadRecursive((Map)o, alreadyVisitedEntities, update);
+ } else if(o instanceof Collection && !checkForIdenticalCdmEntity(alreadyVisitedEntities, o)) {
+ loadRecursive((Collection)o, alreadyVisitedEntities, update);
+ }
+ }
+ // we return the original cdm entity in the sub graph because we
+ // want to continue to recurse on the input cdm entity graph
+ // and not the one in the cache
+ return cdmEntityInSubGraph;
+ } catch (SecurityException e) {
+ throw new CdmClientCacheException(e);
+ } catch (IllegalArgumentException e) {
+ throw new CdmClientCacheException(e);
+ } catch (IllegalAccessException e) {
+ throw new CdmClientCacheException(e);
+ }
+ }
+
+ private boolean checkForIdenticalCdmEntity(List<Object> objList, Object objToCompare) {
+ if(objToCompare != null) {
+ for(Object obj : objList) {
+ if(obj == objToCompare) {
+ return true;
+ }
+ }
+ }
+ return false;
+ }
+
+
+ public static boolean isRecursiveEnabled() {
+ return isRecursiveEnabled;
+ }
+
+ public static void setRecursiveEnabled(boolean ire) {
+ isRecursiveEnabled = ire;
+ }
+}
--- /dev/null
+package eu.etaxonomy.taxeditor.remoting.cache;
+
+public class CdmClientCacheException extends RuntimeException {
+
+ public CdmClientCacheException(String message) {
+ super(message);
+ }
+
+ public CdmClientCacheException(Exception e) {
+ super(e);
+ }
+}
--- /dev/null
+package eu.etaxonomy.taxeditor.remoting.cache;
+
+import eu.etaxonomy.cdm.model.common.CdmBase;
+
+public class CdmEntityCacheKey {
+
+ private Class<? extends CdmBase> persistenceClass;
+ private int persistenceId;
+
+ public CdmEntityCacheKey(CdmBase cdmBase) {
+ this.persistenceClass = cdmBase.getClass();
+ this.persistenceId = cdmBase.getId();
+ }
+
+ public CdmEntityCacheKey(Class<? extends CdmBase> clazz, int id) {
+ this.persistenceClass = clazz;
+ this.persistenceId = id;
+ }
+
+
+
+ public Class<? extends CdmBase> getPersistenceClass() {
+ return persistenceClass;
+ }
+
+ public int getPersistenceId() {
+ return persistenceId;
+ }
+ @Override
+ public boolean equals(Object obj) {
+ if(obj == null || !(obj instanceof CdmEntityCacheKey)) {
+ return false;
+ }
+
+ if(this == obj) {
+ return true;
+ }
+ CdmEntityCacheKey that = (CdmEntityCacheKey) obj;
+ if(this.persistenceClass.equals(that.persistenceClass) && this.persistenceId == that.persistenceId) {
+ return true;
+ }
+
+ return false;
+ }
+
+ @Override
+ public int hashCode() {
+ return (this.persistenceClass.getName() + String.valueOf(this.persistenceId)).hashCode();
+ }
+
+ @Override
+ public String toString() {
+ return this.persistenceClass.getName() + String.valueOf(this.persistenceId);
+ }
+
+}
--- /dev/null
+package eu.etaxonomy.taxeditor.remoting.cache;
+
+import java.io.FileInputStream;
+import java.io.FileOutputStream;
+import java.io.IOException;
+import java.io.ObjectInputStream;
+import java.io.ObjectOutputStream;
+import java.lang.reflect.Field;
+import java.net.URISyntaxException;
+import java.net.URL;
+import java.util.HashMap;
+import java.util.Iterator;
+import java.util.Map;
+
+import net.sf.ehcache.Cache;
+import net.sf.ehcache.Element;
+
+import org.eclipse.core.runtime.FileLocator;
+import org.eclipse.core.runtime.Platform;
+import org.hibernate.cfg.Configuration;
+import org.hibernate.mapping.PersistentClass;
+import org.hibernate.mapping.Property;
+import org.hibernate.property.Getter;
+import org.osgi.framework.Bundle;
+
+
+public class CdmModelCacher {
+
+
+
+
+ public static String HB_CONFIG_FILE_PATH= "/eu/etaxonomy/cdm/mappings/hibernate.cfg.xml";
+
+ public static final String CDM_MAP_SER_FILE_PATH = "resources/cdm.map.ser";
+
+
+
+
+ public void cacheGetterFields(Cache cache) throws IOException, ClassNotFoundException, URISyntaxException {
+ Map<String, CdmModelFieldPropertyFromClass> modelClassMap = loadModelClassMap();
+
+ cache.removeAll();
+
+ for(Map.Entry<String, CdmModelFieldPropertyFromClass> entry : modelClassMap.entrySet()) {
+ cache.put(new Element(entry.getKey(), entry.getValue()));
+ }
+ }
+
+ public Map<String, CdmModelFieldPropertyFromClass> loadModelClassMap() throws URISyntaxException, IOException, ClassNotFoundException {
+
+ Bundle bundle = Platform.getBundle("eu.etaxonomy.taxeditor.cdmlib");
+
+ URL modelMapFileBundleURL = bundle.getEntry(CDM_MAP_SER_FILE_PATH);
+ URL modelMapFileURL = FileLocator.resolve(modelMapFileBundleURL);
+ String modelMapFilePath = modelMapFileURL.getFile();
+
+ FileInputStream fin = new FileInputStream(modelMapFilePath);
+ ObjectInputStream ois = new ObjectInputStream(fin);
+ Map<String, CdmModelFieldPropertyFromClass> modelClassMap = (Map<String, CdmModelFieldPropertyFromClass>) ois.readObject();
+ ois.close();
+ return modelClassMap;
+ }
+
+
+ public Map<String, CdmModelFieldPropertyFromClass> generateModelClassMap() {
+
+ Configuration configuration = buildConfiguration(HB_CONFIG_FILE_PATH);
+ Iterator<PersistentClass> classMappingIterator = configuration.getClassMappings();
+
+ Map<String, CdmModelFieldPropertyFromClass> modelClassMap = new HashMap<String, CdmModelFieldPropertyFromClass>();
+
+ while(classMappingIterator.hasNext()) {
+ PersistentClass persistentClass = classMappingIterator.next();
+ Class mappedClass = persistentClass.getMappedClass();
+ String mappedClassName = mappedClass.getName();
+
+ CdmModelFieldPropertyFromClass cmgmfc = new CdmModelFieldPropertyFromClass(mappedClassName);
+ System.out.println("Adding class : " + mappedClassName + " to cache");
+ addGetters(persistentClass, cmgmfc);
+ modelClassMap.put(mappedClassName, cmgmfc);
+ }
+ return modelClassMap;
+ }
+
+
+ public static Configuration buildConfiguration(String hibernateConfigFilePath) {
+ Configuration configuration = new Configuration().configure(hibernateConfigFilePath);
+ configuration.buildMappings();
+ return configuration;
+ }
+
+ private void addGetters(PersistentClass persistentClass, CdmModelFieldPropertyFromClass cmgmfc) {
+ if (persistentClass != null) {
+ Iterator propertyIt = persistentClass.getPropertyIterator();
+
+ while(propertyIt.hasNext())
+ {
+ Property property = (Property)propertyIt.next();
+ Getter getter = property.getGetter(persistentClass.getMappedClass());
+ if(getter != null && getter.getMember() != null) {
+ Field field = (Field)getter.getMember();
+
+ //logger.info(" - contains field '" + field.getName() + "' of type '" + field.getType().getName() + "'");
+ cmgmfc.addGetMethods(field.getName());
+ }
+ }
+ addGetters(persistentClass.getSuperclass(), cmgmfc);
+ }
+ }
+
+
+
+ public static void main(String argv[]) {
+
+ // To re-create the serialised cdm map run,
+ // mvn exec:java -Dexec.mainClass="eu.etaxonomy.taxeditor.remoting.cache.CdmModelCacher"
+ // in the eu.etaxonomy.taxeditor.cdmlib project root dir
+ String CDM_MAP_SER_DIR = "resources/";
+
+ CdmModelCacher cdmModelCacher = new CdmModelCacher();
+ Map<String, CdmModelFieldPropertyFromClass> modelClassMap = cdmModelCacher.generateModelClassMap();
+ try{
+
+ FileOutputStream fout = new FileOutputStream(CDM_MAP_SER_DIR + "cdm.map.ser");
+ ObjectOutputStream oos = new ObjectOutputStream(fout);
+ oos.writeObject(modelClassMap);
+ oos.close();
+ System.out.println("CDM Map serialized");
+
+ }catch(Exception ex){
+ ex.printStackTrace();
+ }
+
+ }
+
+
+}
--- /dev/null
+package eu.etaxonomy.taxeditor.remoting.cache;
+
+import java.io.Serializable;
+import java.util.ArrayList;
+import java.util.List;
+
+public class CdmModelFieldPropertyFromClass implements Serializable {
+
+ private static final long serialVersionUID = 5726395976531887526L;
+ private String className;
+ private String parentClassName;
+
+ private List<String> fields = new ArrayList<String>();
+
+
+ public CdmModelFieldPropertyFromClass(String className) {
+ this.setClassName(className);
+ }
+
+ public String getParentClassName() {
+ return parentClassName;
+ }
+
+ public void setParentClassName(String parentClassName) {
+ this.parentClassName = parentClassName;
+ }
+
+ public List<String> getFields() {
+ return fields;
+ }
+
+ public void setFields(List<String> fields) {
+ this.fields = fields;
+ }
+
+ public void addGetMethods(String getMethod) {
+ this.fields.add(getMethod);
+ }
+
+ public String getClassName() {
+ return className;
+ }
+
+ public void setClassName(String className) {
+ this.className = className;
+ }
+
+
+
+
+}
--- /dev/null
+package eu.etaxonomy.taxeditor.remoting.cache;
+
+import java.io.IOException;
+import java.net.URISyntaxException;
+
+import net.sf.ehcache.Cache;
+import net.sf.ehcache.CacheException;
+import net.sf.ehcache.CacheManager;
+import net.sf.ehcache.config.CacheConfiguration;
+import net.sf.ehcache.config.SizeOfPolicyConfiguration;
+
+import org.apache.log4j.Logger;
+
+
+public class CdmRemoteCacheManager {
+
+ private static final Logger logger = Logger.getLogger(CdmRemoteCacheManager.class);
+
+
+ private Cache cdmlibModelCache;
+
+ private static CdmRemoteCacheManager cdmRemoteCacheManager = null;
+
+ public static final String CDM_MODEL_CACHE_NAME = "cdmModelGetMethodsCache";
+
+ private static Thread initThread;
+
+ private static boolean cacheInitialised = false;
+
+ public enum CdmCacheManagerType {
+ CDMLIB_MODEL,
+ DEFAULT
+ }
+
+ public static CdmRemoteCacheManager getInstance(){
+
+ if(cdmRemoteCacheManager == null) {
+ cdmRemoteCacheManager = new CdmRemoteCacheManager();
+ }
+ return cdmRemoteCacheManager;
+ }
+ private CdmRemoteCacheManager() {
+
+
+ try {
+ // NOTE:Programmatically creating the cache manager may solve the problem of
+ // recreating data written to disk on startup
+ // see https://stackoverflow.com/questions/1729605/ehcache-persist-to-disk-issues
+ //String cacheFilePath = CDMLIB_CACHE_MANAGER_CONFIG_RESOURCE.getFile().getAbsolutePath();
+ //InputStream in = this.getClass().getClassLoader().getResourceAsStream("cdmlib-ehcache.xml");
+
+ SizeOfPolicyConfiguration sizeOfConfig = new SizeOfPolicyConfiguration();
+ sizeOfConfig.setMaxDepth(1000);
+ sizeOfConfig.setMaxDepthExceededBehavior("abort");
+
+ CacheConfiguration modelcc = new CacheConfiguration(CDM_MODEL_CACHE_NAME, 0)
+ .eternal(true)
+ .statistics(true)
+ .sizeOfPolicy(sizeOfConfig)
+ .overflowToOffHeap(false);
+
+ cdmlibModelCache = new Cache(modelcc);
+
+ CacheManager.create().addCache(cdmlibModelCache);
+ CdmModelCacher cmdmc = new CdmModelCacher();
+ cmdmc.cacheGetterFields(cdmlibModelCache);
+
+ } catch (CacheException e) {
+ throw new CdmClientCacheException(e);
+ } catch (ClassNotFoundException e) {
+ throw new CdmClientCacheException(e);
+ } catch (IOException e) {
+ throw new CdmClientCacheException(e);
+ } catch (URISyntaxException e) {
+ throw new CdmClientCacheException(e);
+ }
+
+ }
+
+
+ public Cache getCdmModelGetMethodsCache(){
+ return cdmlibModelCache;
+ }
+
+ public static void removeEntityCaches() {
+ CacheManager cm = CacheManager.create();
+ String[] cacheNames = CacheManager.create().getCacheNames();
+ for(String cacheName : cacheNames) {
+ if(!cacheName.equals(CDM_MODEL_CACHE_NAME)) {
+ cm.removeCache(cacheName);
+ }
+ }
+ }
+}
--- /dev/null
+// $Id$
+/**
+ * Copyright (C) 2014 EDIT
+ * European Distributed Institute of Taxonomy
+ * http://www.e-taxonomy.eu
+ *
+ * The contents of this file are subject to the Mozilla Public License Version 1.1
+ * See LICENSE.TXT at the top of this package for the full license terms.
+ */
+package eu.etaxonomy.taxeditor.remoting.cache;
+
+import java.util.ArrayList;
+import java.util.Collection;
+import java.util.HashSet;
+import java.util.List;
+import java.util.Map;
+import java.util.Set;
+
+import net.sf.ehcache.Cache;
+import net.sf.ehcache.CacheManager;
+import net.sf.ehcache.Element;
+import net.sf.ehcache.Status;
+import net.sf.ehcache.config.CacheConfiguration;
+import net.sf.ehcache.config.SizeOfPolicyConfiguration;
+import net.sf.ehcache.statistics.LiveCacheStatistics;
+
+import org.apache.log4j.Logger;
+
+import eu.etaxonomy.cdm.api.application.CdmApplicationState;
+import eu.etaxonomy.cdm.api.cache.CdmServiceCacher;
+import eu.etaxonomy.cdm.api.service.UpdateResult;
+import eu.etaxonomy.cdm.api.service.dto.CdmEntityIdentifier;
+import eu.etaxonomy.cdm.model.ICdmCacher;
+import eu.etaxonomy.cdm.model.common.CdmBase;
+import eu.etaxonomy.taxeditor.session.ICdmEntitySessionManager;
+
+/**
+ *
+ * This cache guarantees that
+ * - all objects put will be ancestors of CdmBase
+ * - all CdmBase objects in the cache will be already de-proxied
+ * - after any CdmBase object is put in the cache,
+ * all non-null / non-proxy CdmBase objects in the sub-graph
+ * will also be present in the cache.
+ *
+ * @author cmathew
+ * @date 14 Oct 2014
+ *
+ */
+
+public class CdmTransientEntityCacher implements ICdmCacher {
+
+ private static final Logger logger = Logger.getLogger(CdmTransientEntityCacher.class);
+
+
+ private final ICdmEntitySessionManager cdmEntitySessionManager;
+
+ private static CdmServiceCacher cdmServiceCacher;
+
+ private final String cacheId;
+
+ private final Cache cache;
+
+ private final CacheLoader cacheLoader;
+
+
+
+ public CdmTransientEntityCacher(String cacheId, ICdmEntitySessionManager cdmEntitySessionManager) {
+ this.cacheId = cacheId;
+
+ cache = new Cache(getEntityCacheConfiguration(cacheId));
+
+ CacheManager.create().addCache(cache);
+
+ this.cdmEntitySessionManager = cdmEntitySessionManager;
+
+ cacheLoader = new CacheLoader(this);
+ }
+
+ public CdmTransientEntityCacher(Object sessionOwner, ICdmEntitySessionManager cdmEntitySessionManager) {
+ this(generateCacheId(sessionOwner), cdmEntitySessionManager);
+ }
+
+ public static String generateCacheId(Object sessionOwner) {
+ return sessionOwner.getClass().getName() + String.valueOf(sessionOwner.hashCode());
+ }
+
+ /**
+ * Returns the default cache configuration.
+ *
+ * @return
+ */
+ private CacheConfiguration getEntityCacheConfiguration(String cacheId) {
+ SizeOfPolicyConfiguration sizeOfConfig = new SizeOfPolicyConfiguration();
+ sizeOfConfig.setMaxDepth(10000);
+ sizeOfConfig.setMaxDepthExceededBehavior("abort");
+
+ return new CacheConfiguration(cacheId, 0)
+ .eternal(true)
+ .statistics(true)
+ .sizeOfPolicy(sizeOfConfig)
+ .overflowToOffHeap(false);
+
+ }
+
+ public static void setDefaultCacher(CdmServiceCacher css) {
+ cdmServiceCacher = css;
+ }
+
+ public LiveCacheStatistics getCacheStatistics() {
+ if(cache.getStatus() == Status.STATUS_ALIVE) {
+ return cache.getLiveCacheStatistics();
+ }
+ return null;
+
+ }
+
+ /**
+ * Returns the cache corresponding to the cache id
+ *
+ * @param cacheId
+ * @return
+ */
+ private Cache getCache() {
+ return CacheManager.create().getCache(cacheId);
+ }
+
+ public <T extends Object> T load(T obj, boolean update) {
+ return cacheLoader.load(obj, true, update);
+ }
+
+ public <T extends Object> Map<T,T> load(Map<T,T> map, boolean update){
+ return cacheLoader.load(map, true, update);
+ }
+
+ public <T extends Object> Collection<T> load(Collection<T> collection, boolean update){
+ return cacheLoader.load(collection, true, update);
+ }
+
+ public CdmBase load(CdmBase cdmEntity, boolean update) {
+ return cacheLoader.load(cdmEntity, true, update);
+ }
+
+
+ private CdmBase load(CdmEntityIdentifier cei, boolean update) {
+ return CdmApplicationState.getCommonService().findWithUpdate(cei.getCdmClass(), cei.getId());
+ }
+
+
+ public UpdateResult load(UpdateResult result, boolean update) {
+ // probably a good time to broadcast to other sessions
+
+ Set<CdmBase> updatedObjects = result.getUpdatedObjects();
+ Set<CdmBase> reloadedObjects = new HashSet<CdmBase>();
+ Set<CdmEntityIdentifier> updatedCdmIds = result.getUpdatedCdmIds();
+ boolean updatedCdmIdsIsEmpty = updatedCdmIds.isEmpty();
+
+ // if the cdm identifier set contains identifiers of objects already
+ // present in the updated objects set reomve them
+ for(CdmBase updatedObject : updatedObjects) {
+ if(updatedObject != null && exists(new CdmEntityCacheKey(updatedObject.getClass(), updatedObject.getId()))) {
+ CdmEntityIdentifier cdmEntityIdentifier = new CdmEntityIdentifier(updatedObject.getId(), updatedObject.getClass());
+ if(!updatedCdmIdsIsEmpty && updatedCdmIds.contains(cdmEntityIdentifier)) {
+ updatedCdmIds.remove(cdmEntityIdentifier);
+ }
+ reloadedObjects.add(cacheLoader.load(updatedObject, true, update));
+ }
+ }
+
+ // remote load cdm identifiers of objects which already exist
+ // in the cache
+
+ for(CdmEntityIdentifier cei : updatedCdmIds) {
+ if(exists(new CdmEntityCacheKey(cei.getCdmClass(), cei.getId()))) {
+ reloadedObjects.add(load(cei, update));
+ }
+
+ }
+ updatedObjects.clear();
+ result.addUpdatedObjects(reloadedObjects);
+ return result;
+ }
+
+ public CdmModelFieldPropertyFromClass getFromCdmlibModelCache(String className) {
+ return cacheLoader.getFromCdmlibModelCache(className);
+ }
+
+
+
+
+ @Override
+ public void put(CdmBase cdmEntity) {
+
+ CdmBase cachedCdmEntity = cdmServiceCacher.load(cdmEntity);
+ if(cachedCdmEntity != null) {
+ logger.info("Cdm Entity with id : " + cdmEntity.getId() + " already exists in permanent cache. Ignoring put.");
+ return;
+ }
+ CdmEntityCacheKey id = new CdmEntityCacheKey(cdmEntity);
+
+ cachedCdmEntity = getFromCache(id);
+ if(cachedCdmEntity == null) {
+ getCache().put(new Element(id, cdmEntity));
+ cdmEntity.initListener();
+ logger.info(" - object of type " + cdmEntity.getClass().getName() + " with id " + cdmEntity.getId() + " put in cache");
+ return;
+ }
+ logger.info(" - object of type " + cdmEntity.getClass().getName() + " with id " + cdmEntity.getId() + " already exists");
+ }
+
+
+ private Element getCacheElement(CdmEntityCacheKey key) {
+ return getCache().get(key);
+ }
+
+
+ public CdmBase getFromCache(CdmEntityCacheKey id) {
+ Element e = getCacheElement(id);
+
+ if (e == null) {
+ return null;
+ } else {
+ return (CdmBase) e.getObjectValue();
+ }
+ }
+
+ public CdmBase getFromCache(Class<? extends CdmBase> clazz, int id) {
+ CdmEntityCacheKey cacheId = generateKey(clazz,id);
+ return getFromCache(cacheId);
+ }
+
+ @Override
+ public CdmBase getFromCache(CdmBase cdmBase) {
+
+ CdmEntityCacheKey cacheId = generateKey((CdmBase)ProxyUtils.deproxy(cdmBase));
+ // first try this cache
+ CdmBase cachedCdmEntity = getFromCache(cacheId);
+
+ if(cachedCdmEntity == null) {
+ // ... then try the permanent cache
+ cachedCdmEntity = cdmServiceCacher.getFromCache(cdmBase.getUuid());
+ }
+
+ return cachedCdmEntity;
+ }
+
+ public CdmBase getFromCache(CdmBase cdmBase, Class<? extends CdmBase> clazz) {
+
+ cdmBase = CdmBase.deproxy(cdmBase, clazz);
+ return getFromCache(cdmBase);
+ }
+
+ public List<CdmBase> getAllEntities() {
+ List<CdmBase> entities = new ArrayList<CdmBase>();
+ Map<String, CdmBase> elementsMap = getCache().getAllWithLoader(getCache().getKeys(), null);
+ for (Map.Entry<String, CdmBase> entry : elementsMap.entrySet()) {
+ entities.add(entry.getValue());
+ }
+ return entities;
+ }
+
+ public boolean exists(CdmEntityCacheKey key) {
+ return (getCacheElement(key) != null);
+ }
+
+ public boolean existsAndIsNotNull(CdmEntityCacheKey id) {
+ return getFromCache(id) != null;
+ }
+
+ public void clear() {
+ cache.removeAll();
+ }
+
+ public void dispose() {
+ CacheManager.create().removeCache(cache.getName());
+ cache.dispose();
+
+ }
+
+
+ public static CdmEntityCacheKey generateKey(Class<? extends CdmBase> clazz, int id) {
+ return new CdmEntityCacheKey(clazz, id);
+ }
+
+
+ public static CdmEntityCacheKey generateKey(CdmBase cdmBase) {
+ Class<? extends CdmBase> entityClass = cdmBase.getClass();
+ int id = cdmBase.getId();
+ return new CdmEntityCacheKey(entityClass, id);
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.cdm.model.ICdmCacher#load(eu.etaxonomy.cdm.model.common.CdmBase)
+ */
+ @Override
+ public CdmBase load(CdmBase cdmEntity) {
+ return load(cdmEntity, true);
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.cdm.model.ICdmCacher#isCachable(eu.etaxonomy.cdm.model.common.CdmBase)
+ */
+ @Override
+ public boolean isCachable(CdmBase cdmEntity) {
+ return true;
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.cdm.model.ICdmCacher#exists(eu.etaxonomy.cdm.model.common.CdmBase)
+ */
+ @Override
+ public boolean exists(CdmBase cdmBase) {
+ return exists(generateKey(cdmBase));
+ }
+
+
+
+}
--- /dev/null
+// $Id$
+/**
+ * Copyright (C) 2015 EDIT
+ * European Distributed Institute of Taxonomy
+ * http://www.e-taxonomy.eu
+ *
+ * The contents of this file are subject to the Mozilla Public License Version 1.1
+ * See LICENSE.TXT at the top of this package for the full license terms.
+ */
+package eu.etaxonomy.taxeditor.remoting.cache;
+
+import java.lang.reflect.Field;
+import java.util.ArrayList;
+import java.util.Collection;
+import java.util.HashMap;
+import java.util.Iterator;
+import java.util.List;
+import java.util.Map;
+
+import net.sf.ehcache.Cache;
+import net.sf.ehcache.CacheManager;
+import net.sf.ehcache.Element;
+
+import org.apache.log4j.Logger;
+import org.hibernate.collection.spi.PersistentCollection;
+import org.hibernate.proxy.HibernateProxy;
+import org.hibernate.proxy.LazyInitializer;
+import org.springframework.util.ReflectionUtils;
+
+import eu.etaxonomy.cdm.api.cache.CdmCacher;
+import eu.etaxonomy.cdm.model.common.CdmBase;
+
+/**
+ * @author cmathew
+ * @date 9 Feb 2015
+ *
+ */
+public class EntityCacherDebugResult {
+
+ private static final Logger logger = Logger.getLogger(EntityCacherDebugResult.class);
+
+ private Map<CdmEntityInfo, CdmEntityInfo> duplicateCdmEntityMap;
+
+ private List<CdmEntityInfo> notInCacheList;
+
+ private CdmTransientEntityCacher cacher;
+
+ private List<CdmEntityInfo> rootElements;
+
+ StringBuilder debugOutput = new StringBuilder();
+
+ public EntityCacherDebugResult() {
+ }
+
+
+ public <T extends CdmBase> EntityCacherDebugResult(CdmTransientEntityCacher cacher, Collection<T> rootEntities) {
+ this.cacher = cacher;
+ init();
+
+ if(rootEntities != null && !rootEntities.isEmpty()) {
+ for(CdmBase rootEntity : rootEntities) {
+ debug(rootEntity, true);
+ String out = toString(duplicateCdmEntityMap, notInCacheList, rootEntity);
+ System.out.println(out);
+ debugOutput.append(out);
+ clear();
+ }
+
+ }
+ }
+
+ private void init() {
+ duplicateCdmEntityMap = new HashMap<CdmEntityInfo, CdmEntityInfo>();
+ notInCacheList = new ArrayList<CdmEntityInfo>();
+ rootElements = new ArrayList<CdmEntityInfo>();
+ }
+
+ private void clear() {
+ duplicateCdmEntityMap.clear();
+ notInCacheList.clear();
+ }
+
+ public void addDuplicateEntity(CdmEntityInfo cei, CdmEntityInfo cachedCei) {
+ duplicateCdmEntityMap.put(cei, cachedCei);
+ }
+
+ public void addEntityNotInCache(CdmEntityInfo cei) {
+ notInCacheList.add(cei);
+ }
+
+ public List<CdmEntityInfo> getRootElements() {
+ return rootElements;
+ }
+
+ private void print(Map<CdmEntityInfo, CdmEntityInfo> duplicateCdmEntityMap,
+ List<CdmEntityInfo> notInCacheList,
+ CdmBase rootEntity) {
+ System.out.println(toString(duplicateCdmEntityMap, notInCacheList, rootEntity));
+ }
+
+
+ @Override
+ public String toString() {
+ return debugOutput.toString();
+ }
+
+ private String toString(Map<CdmEntityInfo, CdmEntityInfo> duplicateCdmEntityMap,
+ List<CdmEntityInfo> notInCacheList,
+ CdmBase rootEntity) {
+
+
+ StringBuilder sb = new StringBuilder();
+ sb.append(System.getProperty("line.separator"));
+ sb.append("<<< Root Entity " + rootEntity.getUserFriendlyTypeName() + " with id " + rootEntity.getId() + " >>>");
+ sb.append(System.getProperty("line.separator"));
+ if(duplicateCdmEntityMap.isEmpty()) {
+ sb.append("No Duplicate CDM Entities.");
+ } else {
+ sb.append("Duplicate CDM Entities,");
+
+ for (Map.Entry<CdmEntityInfo, CdmEntityInfo> entry : duplicateCdmEntityMap.entrySet())
+ {
+ sb.append(System.getProperty("line.separator"));
+ CdmEntityInfo cei = entry.getKey();
+ CdmBase cb = (CdmBase) cei.getObject();
+
+ sb.append(" - " + cei.getField().getName() + ":" + cb.getUserFriendlyTypeName() + "/" + cb.getId());
+ if(cei.getParent() != null) {
+ Object cbParent = cei.getParent().getObject();
+ sb.append(" in entity " + cbParent.getClass().getCanonicalName());
+ if(cbParent instanceof CdmBase) {
+
+ sb.append(" with id : " + ((CdmBase)cbParent).getId());
+ }
+ }
+ sb.append(System.getProperty("line.separator"));
+ sb.append(" -- entity belongs to cache(s) : " + getCachesContainingEntity(cb));
+ sb.append(System.getProperty("line.separator"));
+
+
+ CdmEntityInfo dupCei = entry.getValue();
+ CdmBase dupCb = (CdmBase) dupCei.getObject();
+
+ String dupCeiFieldName = "";
+ if(dupCei.getField() != null) {
+ dupCeiFieldName = dupCei.getField().getName();
+ }
+ sb.append(" - " + dupCeiFieldName + ":" + dupCb.getUserFriendlyTypeName() + "/" + dupCb.getId());
+ if(dupCei.getParent() != null) {
+ Object dupCbParent = dupCei.getParent().getObject();
+ sb.append(" in entity " + dupCbParent.getClass().getCanonicalName());
+ if(dupCbParent instanceof CdmBase) {
+ sb.append(" with id : " + ((CdmBase)dupCbParent).getId());
+ }
+ }
+ sb.append(System.getProperty("line.separator"));
+ sb.append(" -- entity belongs to cache(s) : " + getCachesContainingEntity(dupCb));
+ sb.append(System.getProperty("line.separator"));
+ sb.append("-----------");
+ }
+ }
+
+ sb.append(System.getProperty("line.separator"));
+ sb.append(System.getProperty("line.separator"));
+
+ if(notInCacheList.isEmpty()) {
+ sb.append("No Entities found which are not in Cache.");
+ } else {
+ sb.append("Not In Cache Entities,");
+
+ for(CdmEntityInfo cei : notInCacheList) {
+ CdmBase cb = (CdmBase) cei.getObject();
+ Object cbParent = cei.getParent().getObject();
+
+ sb.append(System.getProperty("line.separator"));
+
+ String fieldName = "";
+ if(cei.getField() != null) {
+ fieldName = cei.getField().getName();
+ }
+ sb.append(" - " + fieldName + ":" + cb.getUserFriendlyTypeName() + "/" + cb.getId());
+
+ if(cbParent instanceof CdmBase) {
+ sb.append(" of entity " + ((CdmBase)cbParent).getUserFriendlyTypeName());
+ } else {
+ sb.append(" of entity " + cbParent.getClass().getName());
+ }
+ }
+ }
+ sb.append(System.getProperty("line.separator"));
+ return sb.toString();
+ }
+
+ private String getCachesContainingEntity(CdmBase cdmEntity) {
+ Cache defaultCache = CacheManager.create().getCache(CdmCacher.DEFAULT_CACHE_NAME);
+ String caches = "";
+ Element dce = defaultCache.get(cdmEntity.getUuid());
+ if(dce != null && dce.getObjectValue() == cdmEntity) {
+ caches = "{DC}";
+ }
+
+ Object cte = cacher.getFromCache(CdmTransientEntityCacher.generateKey(cdmEntity));
+ if(cte != null && cte == cdmEntity) {
+ caches += "{TC}";
+ }
+ return caches;
+ }
+
+
+ private void debug(CdmBase cdmEntity, boolean recursive) {
+ if(cdmEntity == null) {
+ return;
+ }
+ logger.info("---- starting recursive debug for cdm entity " + cdmEntity.getClass().getName() + " with id " + cdmEntity.getId());
+ List<CdmEntityInfo> alreadyVisitedEntities = new ArrayList<CdmEntityInfo>();
+ CdmEntityInfo cei = new CdmEntityInfo(ProxyUtils.deproxy(cdmEntity));
+ debugRecursive(cdmEntity, alreadyVisitedEntities, cei);
+ rootElements.add(cei);
+ alreadyVisitedEntities.clear();
+ logger.info("---- ending recursive debug for cdm entity " + cdmEntity.getClass().getName() + " with id " + cdmEntity.getId() + "\n");
+ }
+
+ private <T extends Object> void debugRecursive(T obj,
+ List<CdmEntityInfo> alreadyVisitedEntities,
+ CdmEntityInfo cei) {
+ if(obj == null) {
+ return;
+ }
+ if(obj instanceof CdmBase) {
+ debugRecursive((CdmBase)obj, alreadyVisitedEntities, cei);
+ } else if (obj instanceof Map) {
+ debug((Map<T,T>)obj, alreadyVisitedEntities, cei);
+ } else if (obj instanceof Collection) {
+ debug((Collection<T>)obj, alreadyVisitedEntities, cei);
+ }
+
+ logger.info("No caching yet for type " + obj.getClass().getName());
+
+
+ }
+
+ private <T extends Object> void debug(Map<T,T> map,
+ List<CdmEntityInfo> alreadyVisitedEntities,
+ CdmEntityInfo cei) {
+ if(map == null || map.isEmpty()) {
+ return;
+ }
+
+ int originalMapSize = map.size();
+
+ Iterator<Map.Entry<T,T>> iter = map.entrySet().iterator();
+ int i=0;
+ while ( iter.hasNext() ) {
+ Map.Entry<T,T> e = iter.next();
+ CdmEntityInfo childCei = new CdmEntityInfo(e);
+ cei.addChild(childCei);
+
+ CdmEntityInfo keyCei = new CdmEntityInfo(ProxyUtils.deproxy(e.getKey()));
+ childCei.addChild(keyCei);
+ CdmEntityInfo valueCei = new CdmEntityInfo(ProxyUtils.deproxy(e.getValue()));
+ childCei.addChild(valueCei);
+
+ debugRecursive(e.getKey(), alreadyVisitedEntities, keyCei);
+ debugRecursive(e.getValue(), alreadyVisitedEntities, valueCei);
+ }
+ }
+
+ private <T extends Object> void debug(Collection<T> collection,
+ List<CdmEntityInfo> alreadyVisitedEntities,
+ CdmEntityInfo cei) {
+ int length = collection.size();
+ Object[] result = new Object[length];
+ Iterator<T> collectionItr = collection.iterator();
+
+ while(collectionItr.hasNext()) {
+ Object obj = collectionItr.next();
+ CdmEntityInfo childCei = new CdmEntityInfo(ProxyUtils.deproxy(obj));
+ cei.addChild(childCei);
+ debugRecursive(obj, alreadyVisitedEntities, childCei);
+
+ }
+
+ }
+
+ private void debugRecursive(CdmBase cdmEntity,
+ List<CdmEntityInfo> alreadyVisitedEntities,
+ CdmEntityInfo cei) {
+
+ CdmBase cachedCdmEntityInSubGraph = null;
+
+ if(cei.getObject() instanceof CdmBase) {
+ CdmBase cb = (CdmBase)cei.getObject();
+ cachedCdmEntityInSubGraph = cacher.getFromCache(cb);
+ if(cachedCdmEntityInSubGraph != cb) {
+ // found a cdm entity which is not in cache - need to record this
+ //logger.info(" - found entity not in cache " + fieldName + "' in object of type " + clazz.getName() + " with id " + cdmEntity.getId());
+ addEntityNotInCache(cei);
+ }
+ }
+
+
+ // we want to recursive through the cdmEntity (and not the cachedCdmEntity)
+ // since there could be new or deleted objects in the cdmEntity sub-graph
+
+ // start by getting the fields from the cdm entity
+ String className = cdmEntity.getClass().getName();
+ CdmModelFieldPropertyFromClass cmgmfc = cacher.getFromCdmlibModelCache(className);
+ if(cmgmfc != null) {
+ alreadyVisitedEntities.add(cei);
+ List<String> fields = cmgmfc.getFields();
+ for(String field : fields) {
+ // retrieve the actual object corresponding to the field.
+ // this object will be either a CdmBase or a Collection / Map
+ // with CdmBase as the generic type
+ String f = field;
+ CdmEntityInfo childCei = getDebugCdmBaseTypeFieldValue(cdmEntity, field, alreadyVisitedEntities, cei);
+ if(!childCei.isProxy()) {
+ Object object = childCei.getObject();
+ if(object != null && object instanceof CdmBase) {
+ CdmBase cdmEntityInSubGraph = (CdmBase)object;
+ if(!containsIdenticalCdmEntity(alreadyVisitedEntities, cdmEntityInSubGraph)) {
+ logger.info("recursive debugging object of type " + cdmEntityInSubGraph.getClass().getName() + " with id " + cdmEntityInSubGraph.getId());
+ debugRecursive(cdmEntityInSubGraph, alreadyVisitedEntities, childCei);
+ } else {
+ logger.info("object of type " + cdmEntityInSubGraph.getClass().getName() + " with id " + cdmEntityInSubGraph.getId() + " already visited");
+ }
+ }
+ }
+ }
+ } else {
+ throw new CdmClientCacheException("CdmEntity with class " + cdmEntity.getClass().getName() + " is not found in the cdmlib model cache. " +
+ "The cache may be corrupted or not in sync with the latest model version" );
+ }
+
+ }
+
+
+ private CdmEntityInfo getDebugCdmBaseTypeFieldValue(CdmBase cdmEntity,
+ String fieldName,
+ List<CdmEntityInfo> alreadyVisitedEntities,
+ CdmEntityInfo cei) {
+
+ CdmEntityInfo childCei = null;
+ Class<?> clazz = cdmEntity.getClass();
+ try {
+ // this call will search in the provided class as well as
+ // the super classes until it finds the field
+ Field field = ReflectionUtils.findField(clazz, fieldName);
+
+ if(field == null) {
+ throw new CdmClientCacheException("Field '" + fieldName
+ + "' not found when searching in class '" + clazz.getName() + "' and its supercalsses");
+ }
+ field.setAccessible(true);
+ Object o = field.get(cdmEntity);
+ o = ProxyUtils.deproxy(o);
+ CdmBase cdmEntityInSubGraph = null;
+
+ boolean isHibernateProxy = false;
+ boolean isPersistentCollection = false;
+
+ childCei = new CdmEntityInfo(o);
+ cei.addChild(childCei);
+ childCei.setField(field);
+
+ if(o != null) {
+ boolean isProxy = ProxyUtils.isProxy(o);
+
+ childCei.setProxy(isProxy);
+ if(!isProxy) {
+ childCei.setObject(o);
+ if(CdmBase.class.isAssignableFrom(o.getClass())) {
+ logger.info("found initialised cdm entity '" + fieldName + "' in object of type " + clazz.getName() + " with id " + cdmEntity.getId());
+ cdmEntityInSubGraph = (CdmBase)o;
+
+ //logger.info(" - found duplicate entity at " + fieldName + "' in object of type " + clazz.getName() + " with id " + cdmEntity.getId());
+ CdmEntityInfo dupCei = getDuplicate(alreadyVisitedEntities, cdmEntityInSubGraph);
+ if(dupCei != null) {
+ addDuplicateEntity(childCei, dupCei);
+ }
+
+ } else if(o instanceof Map) {
+ debugRecursive((Map)o, alreadyVisitedEntities, childCei);
+ } else if(o instanceof Collection) {
+ debugRecursive((Collection)o, alreadyVisitedEntities, childCei);
+ }
+
+ }
+ }
+ // we return the original cdm entity in the sub graph because we
+ // want to continue to recurse on the input cdm entity graph
+ // and not the one in the cache
+
+ return childCei;
+ } catch (SecurityException e) {
+ throw new CdmClientCacheException(e);
+ } catch (IllegalArgumentException e) {
+ throw new CdmClientCacheException(e);
+ } catch (IllegalAccessException e) {
+ throw new CdmClientCacheException(e);
+ }
+ }
+
+
+ private CdmEntityInfo getDuplicate(List<CdmEntityInfo> alreadyVisitedEntities, Object objectToCompare) {
+ if(objectToCompare != null ) {
+ for(CdmEntityInfo cei: alreadyVisitedEntities) {
+ if(objectToCompare.equals(cei.getObject()) && objectToCompare != cei.getObject()) {
+ return cei;
+ }
+ }
+ }
+ return null;
+ }
+
+ private boolean containsIdenticalCdmEntity(List<CdmEntityInfo> ceiSet, Object objectToCompare) {
+ boolean foundIdentical = false;
+ if(objectToCompare != null) {
+ for(CdmEntityInfo cei : ceiSet) {
+ if(cei.getObject() == objectToCompare) {
+ foundIdentical = true;
+ } else if(objectToCompare.equals(cei.getObject())) {
+ return false;
+ }
+ }
+ }
+ return foundIdentical;
+ }
+
+ public class CdmEntityInfo {
+
+ private Object object;
+ private CdmEntityInfo parent;
+ private List<CdmEntityInfo> children;
+ private Field field;
+ private String label;
+ private boolean isProxy;
+
+ public CdmEntityInfo(Object object) {
+ this.object = object;
+ isProxy = false;
+ children = new ArrayList<CdmEntityInfo>();
+ }
+
+ public CdmEntityInfo getParent() {
+ return parent;
+ }
+
+ public void setParent(CdmEntityInfo parent) {
+ this.parent = parent;
+ }
+
+ public List<CdmEntityInfo> getChildren() {
+ return children;
+ }
+
+ public void setChildren(List<CdmEntityInfo> children) {
+ this.children = children;
+ }
+
+ public void addChild(CdmEntityInfo cei) {
+ this.children.add(cei);
+ cei.setParent(this);
+ }
+
+ public Field getField() {
+ return field;
+ }
+
+ public void setField(Field field) {
+ this.field = field;
+ }
+
+
+ public String getLabel() {
+ String label;
+ String fieldName = "";
+ if(field != null) {
+ fieldName = field.getName();
+ }
+
+ if(object != null) {
+ String className = object.getClass().getName();
+ if(object instanceof HibernateProxy) {
+ LazyInitializer hli = ((HibernateProxy)object).getHibernateLazyInitializer();
+ if(hli.isUninitialized()) {
+ className = "HibernateProxy";
+ } else {
+ className = "InitialisedHibernateProxy";
+ }
+ label = "[" + className + "] " + fieldName;
+ } else if(object instanceof PersistentCollection) {
+ PersistentCollection pc = ((PersistentCollection)object);
+ if(!pc.wasInitialized()) {
+ className = "PersistentCollection";
+ } else {
+ className = "InitialisedPersistentCollection";
+ }
+ label = "[" + className + "] " + fieldName;
+ } else if(object instanceof Collection) {
+ label = "[" + className + "] " + fieldName + " : " + String.valueOf(((Collection)object).size());
+ } else if(object instanceof Map) {
+ label = "[" + className + "] " + fieldName + " : " + String.valueOf(((Map)object).size());
+ } else if(object instanceof CdmBase) {
+ label = getCachesContainingEntity((CdmBase)object) + "[" + className + ",id" + ((CdmBase)object).getId() + "] " + fieldName + " : " + object.toString();
+ } else {
+ label = "[" + className + "] " + fieldName + " : " + object.toString();
+ }
+ } else {
+ label = "[NULL] " + fieldName;
+ }
+ return label;
+ }
+
+ public void setLabel(String label) {
+ this.label = label;
+ }
+
+ public Object getObject() {
+ return object;
+ }
+
+ public void setObject(Object object) {
+ this.object = object;
+ }
+
+ public boolean isProxy() {
+ return isProxy;
+ }
+
+ public void setProxy(boolean isProxy) {
+ this.isProxy = isProxy;
+ }
+
+
+
+ }
+
+}
--- /dev/null
+// $Id$
+/**
+* Copyright (C) 2015 EDIT
+* European Distributed Institute of Taxonomy
+* http://www.e-taxonomy.eu
+*
+* The contents of this file are subject to the Mozilla Public License Version 1.1
+* See LICENSE.TXT at the top of this package for the full license terms.
+*/
+package eu.etaxonomy.taxeditor.remoting.cache;
+
+import java.lang.reflect.Field;
+import java.util.ArrayList;
+import java.util.HashMap;
+import java.util.HashSet;
+import java.util.List;
+import java.util.Map;
+import java.util.Set;
+import java.util.TreeMap;
+import java.util.TreeSet;
+import java.util.UUID;
+
+import org.hibernate.collection.internal.PersistentBag;
+import org.hibernate.collection.internal.PersistentList;
+import org.hibernate.collection.internal.PersistentMap;
+import org.hibernate.collection.internal.PersistentSet;
+import org.hibernate.collection.internal.PersistentSortedMap;
+import org.hibernate.collection.internal.PersistentSortedSet;
+import org.hibernate.collection.spi.PersistentCollection;
+import org.hibernate.proxy.HibernateProxy;
+import org.hibernate.proxy.LazyInitializer;
+import org.springframework.util.ReflectionUtils;
+
+import eu.etaxonomy.cdm.api.application.CdmApplicationState;
+import eu.etaxonomy.cdm.model.common.CdmBase;
+import eu.etaxonomy.cdm.model.common.PersistentMultiLanguageText;
+import eu.etaxonomy.taxeditor.remoting.CdmRemotingException;
+
+/**
+ * @author cmathew
+ * @date 17 Feb 2015
+ *
+ */
+public class ProxyUtils {
+
+
+
+ public static enum CollectionType {
+ SET,
+ LIST,
+ MAP;
+
+ @Override
+ public String toString() {
+ return this.name().toLowerCase();
+ }
+ }
+
+ public static Object getCollectionType(Object obj) {
+ if(obj != null) {
+ if(obj instanceof List) {
+ return CollectionType.LIST;
+ }
+ if(obj instanceof Set) {
+ return CollectionType.SET;
+ }
+ if(obj instanceof Map) {
+ return CollectionType.MAP;
+ }
+ throw new CdmRemotingException("Cannot get Collection Type for " + obj.getClass().getName());
+ }
+ return null;
+ }
+
+ public static Object getObject(PersistentCollection pc) {
+ if(pc != null) {
+ if(pc instanceof PersistentSet) {
+ return new HashSet((Set)pc);
+ }
+ if(pc instanceof PersistentSortedSet) {
+ return new TreeSet((Set)pc);
+ }
+ if(pc instanceof PersistentList || pc instanceof PersistentBag) {
+ return new ArrayList((List)pc);
+ }
+ if(pc instanceof PersistentMap || pc instanceof PersistentMultiLanguageText) {
+ return new HashMap((Map)pc);
+ }
+ if(pc instanceof PersistentSortedMap) {
+ return new TreeMap((Map)pc);
+ }
+ throw new CdmRemotingException("Cannot get Collection field for type " + pc.getClass().getName());
+ }
+ return null;
+ }
+
+ public static CollectionField getCollectionField(PersistentCollection pc) {
+ if(pc != null) {
+ if(pc instanceof PersistentSet) {
+ return new CollectionField(new HashSet((Set)pc), CollectionType.SET);
+ }
+ if(pc instanceof PersistentSortedSet) {
+ return new CollectionField(new TreeSet((Set)pc), CollectionType.SET);
+ }
+ if(pc instanceof PersistentList) {
+ return new CollectionField(new ArrayList((List)pc), CollectionType.LIST);
+ }
+ if(pc instanceof PersistentMap || pc instanceof PersistentMultiLanguageText) {
+ return new CollectionField(new HashMap((Map)pc), CollectionType.MAP);
+ }
+ if(pc instanceof PersistentSortedMap) {
+ return new CollectionField(new TreeMap((Map)pc), CollectionType.MAP);
+ }
+ throw new CdmRemotingException("Cannot get Collection field for type " + pc.getClass().getName());
+ }
+ return null;
+ }
+
+ public static class CollectionField {
+ private final Object col;
+ private final CollectionType type;
+ public CollectionField(Object col, CollectionType type) {
+ this.col = col;
+ this.type = type;
+ }
+
+ public Object getCollection() {
+ return this.col;
+ }
+
+ public CollectionType getType() {
+ return this.type;
+ }
+ }
+
+
+ public static Object deproxy(Object o) {
+ if(o != null && o instanceof HibernateProxy) {
+ LazyInitializer hli = ((HibernateProxy)o).getHibernateLazyInitializer();
+ if(!hli.isUninitialized()) {
+ return hli.getImplementation();
+
+ }
+ }
+
+ if(o != null && o instanceof PersistentCollection) {
+ PersistentCollection pc = ((PersistentCollection)o);
+ if(pc.wasInitialized()) {
+ return ProxyUtils.getObject(pc);
+
+ }
+ }
+ return o;
+ }
+
+ public static boolean isProxy(Object o) {
+ if(o != null && o instanceof HibernateProxy) {
+ LazyInitializer hli = ((HibernateProxy)o).getHibernateLazyInitializer();
+ if(hli.isUninitialized()) {
+ return true;
+ }
+ }
+
+ if(o != null && o instanceof PersistentCollection) {
+ PersistentCollection pc = ((PersistentCollection)o);
+ if(!pc.wasInitialized()) {
+ return true;
+ }
+ }
+
+ return false;
+ }
+
+ public static Object remoteLoadPersistentCollectionIfProxy(Object o, UUID ownerUuid, String fieldName) throws ClassNotFoundException {
+ if(o != null && o instanceof HibernateProxy) {
+ LazyInitializer hli = ((HibernateProxy)o).getHibernateLazyInitializer();
+ if(hli.isUninitialized()) {
+ return CdmApplicationState.getCachedCommonService().find((Class<CdmBase>)Class.forName(hli.getEntityName()),
+ ((Integer)hli.getIdentifier()).intValue());
+ }
+ }
+
+ if(o != null && o instanceof PersistentCollection) {
+ PersistentCollection pc = ((PersistentCollection)o);
+ if(!pc.wasInitialized()) {
+ return CdmApplicationState.getCachedCommonService().initializeCollection(ownerUuid, fieldName);
+ }
+ }
+
+ return o;
+ }
+
+
+
+
+ public static void setRoleValueInOwner(Object owner, String role, Object value) {
+ if(role == null || role.isEmpty()) {
+ throw new CdmRemotingException("Role cannot be null or an empty string");
+ }
+
+ String fieldName = role.substring(role.lastIndexOf(".") + 1);
+
+ Field field = ReflectionUtils.findField(owner.getClass(), fieldName);
+
+ if(field == null) {
+ throw new CdmRemotingException("Field '" + fieldName
+ + "' not found when searching in class '" + owner.getClass() + "' and its supercalsses");
+ }
+
+ field.setAccessible(true);
+
+ try {
+ field.set(owner, value);
+ } catch (IllegalArgumentException e) {
+ throw new CdmRemotingException(e);
+ } catch (IllegalAccessException e) {
+ throw new CdmRemotingException(e);
+ }
+ }
+
+}
--- /dev/null
+// $Id$
+/**
+* Copyright (C) 2014 EDIT
+* European Distributed Institute of Taxonomy
+* http://www.e-taxonomy.eu
+*
+* The contents of this file are subject to the Mozilla Public License Version 1.1
+* See LICENSE.TXT at the top of this package for the full license terms.
+*/
+package eu.etaxonomy.taxeditor.remoting.server;
+
+/**
+ * @author cmathew
+ * @date 23 Sep 2014
+ *
+ */
+public class CDMServerException extends Exception {
+
+ public CDMServerException(String message) {
+ super(message);
+ }
+
+ public CDMServerException(Exception e) {
+ super(e);
+ }
+
+ public CDMServerException(String message,Exception e) {
+ super(message,e);
+ }
+
+}
/**
* Copyright (C) 2014 EDIT
-* European Distributed Institute of Taxonomy
+* European Distributed Institute of Taxonomy
* http://www.e-taxonomy.eu
-*
+*
* The contents of this file are subject to the Mozilla Public License Version 1.1
* See LICENSE.TXT at the top of this package for the full license terms.
*/
-package eu.etaxonomy.cdm.remote;
+package eu.etaxonomy.taxeditor.remoting.source;
import static eu.etaxonomy.cdm.common.XmlHelp.getBeansRoot;
import static eu.etaxonomy.cdm.common.XmlHelp.insertXmlBean;
import eu.etaxonomy.cdm.common.XmlHelp;
import eu.etaxonomy.cdm.config.CdmPersistentSourceUtils;
import eu.etaxonomy.cdm.config.CdmPersistentXMLSource;
-import eu.etaxonomy.cdm.config.CdmSourceException;
-import eu.etaxonomy.cdm.config.ICdmPersistentSource;
import eu.etaxonomy.cdm.config.CdmPersistentXMLSource.CdmSourceProperties;
-import eu.etaxonomy.cdm.database.CdmDataSource;
-import eu.etaxonomy.cdm.database.CdmPersistentDataSource;
-import eu.etaxonomy.cdm.database.DataSourceNotFoundException;
-import eu.etaxonomy.cdm.database.DatabaseTypeEnum;
-import eu.etaxonomy.cdm.database.ICdmDataSource;
-import eu.etaxonomy.cdm.database.types.IDatabaseType;
+import eu.etaxonomy.cdm.config.ICdmPersistentSource;
import eu.etaxonomy.cdm.model.name.NomenclaturalCode;
/**
*/
public class CdmPersistentRemoteSource extends CdmRemoteSourceBase implements ICdmPersistentSource{
private static final Logger logger = Logger.getLogger(CdmPersistentRemoteSource.class);
-
+
public static final String REMOTESOURCE_BEAN_POSTFIX = "RemoteSource";
private String beanName;
private Properties cdmSourceProperties;
private List<Attribute> cdmSourceAttributes;
-
+
/**
* Creates a new instance of CdmPersistentRemoteSource
- *
+ *
* @param name
* @param server
* @param port
* @param contextPath
* @param nomenclaturalCode
* @return
- * @throws CdmRemoteSourceException
+ * @throws CdmRemoteSourceException
*/
public static CdmPersistentRemoteSource NewInstance(String remoteSource) throws CdmRemoteSourceException {
if(exists(remoteSource)) {
} else {
throw new CdmRemoteSourceException("Remote source '" + remoteSource + "' does not exist in sources setting file");
}
-
+
}
-
+
/**S
* Creates a new CdmPersistentRemoteSource
- *
+ *
* @param name
* @param server
* @param port
* @param contextPath
* @param nomenclaturalCode
- * @throws CdmRemoteSourceException
+ * @throws CdmRemoteSourceException
*/
- private CdmPersistentRemoteSource(String remoteSource) throws CdmRemoteSourceException {
-
+ private CdmPersistentRemoteSource(String remoteSource) throws CdmRemoteSourceException {
+
CdmPersistentXMLSource cdmPersistentXMLSource = CdmPersistentXMLSource.NewInstance(remoteSource, REMOTESOURCE_BEAN_POSTFIX);
if(cdmPersistentXMLSource.getElement() != null) {
beanName = cdmPersistentXMLSource.getBeanName();
- // properties from the persistent xml file
+ // properties from the persistent xml file
cdmSourceProperties = cdmPersistentXMLSource.getCdmSourceProperties();
cdmSourceAttributes = cdmPersistentXMLSource.getCdmSourceAttributes();
checkProperties(cdmSourceProperties);
} else {
throw new CdmRemoteSourceException("Remote source '" + remoteSource + "' does not exist in settings file");
- }
+ }
initDatabaseConnection();
}
-
+
private static void checkProperties(Properties cdmSourceProperties) throws CdmRemoteSourceException {
if(!cdmSourceProperties.containsKey(CdmSourceProperties.SERVER.toString())) {
- throw new CdmRemoteSourceException("Could not initialise remote source. Required property '" + CdmSourceProperties.SERVER.toString() + "' is missing");
+ throw new CdmRemoteSourceException("Could not initialise remote source. Required property '" + CdmSourceProperties.SERVER.toString() + "' is missing");
}
String port = (String)cdmSourceProperties.get(CdmSourceProperties.PORT.toString());
if(port == null || port.isEmpty()) {
- throw new CdmRemoteSourceException("Could not initialise remote source. Required property '" + CdmSourceProperties.SERVER.toString() + "' is missing");
- }
+ throw new CdmRemoteSourceException("Could not initialise remote source. Required property '" + CdmSourceProperties.SERVER.toString() + "' is missing");
+ }
if(!cdmSourceProperties.containsKey(CdmSourceProperties.CONTEXTPATH.toString())) {
- throw new CdmRemoteSourceException("Could not initialise remote source. Required property '" + CdmSourceProperties.SERVER.toString() + "' is missing");
- }
+ throw new CdmRemoteSourceException("Could not initialise remote source. Required property '" + CdmSourceProperties.SERVER.toString() + "' is missing");
+ }
// default NomenclaturalCode is always ICNAFP
- if(!cdmSourceProperties.containsKey(CdmSourceProperties.NOMENCLATURAL_CODE.toString())) {
+ if(!cdmSourceProperties.containsKey(CdmSourceProperties.NOMENCLATURAL_CODE.toString())) {
cdmSourceProperties.put(CdmSourceProperties.NOMENCLATURAL_CODE.toString(), NomenclaturalCode.ICNAFP.name());
- }
+ }
}
/* (non-Javadoc)
public String getBeanName() {
return beanName;
}
-
+
@Override
public String getServer() {
return cdmSourceProperties.getProperty(CdmSourceProperties.SERVER.toString());
}
-
+
@Override
public int getPort() {
String port = CdmUtils.Nz(cdmSourceProperties.getProperty(CdmSourceProperties.PORT.toString()));
return Integer.valueOf(port);
}
}
-
+
@Override
public String getContextPath() {
return cdmSourceProperties.getProperty(CdmSourceProperties.CONTEXTPATH.toString());
}
-
+
@Override
public NomenclaturalCode getNomenclaturalCode() {
return NomenclaturalCode.fromString(cdmSourceProperties.getProperty(CdmSourceProperties.NOMENCLATURAL_CODE.toString()));
}
-
+
public static CdmPersistentRemoteSource save(String strRemoteSourceName, ICdmRemoteSource remoteSource) throws CdmRemoteSourceException {
Properties cdmSourceProperties = new Properties();
cdmSourceProperties.put(CdmSourceProperties.SERVER.toString(), remoteSource.getServer());
checkProperties(cdmSourceProperties);
return save(strRemoteSourceName, cdmSourceProperties);
}
-
+
private static CdmPersistentRemoteSource save(String strRemoteSourceName,Properties cdmSourceProperties) throws CdmRemoteSourceException {
//root
}
//save
- saveToXml(root.getDocument(),
- CdmPersistentSourceUtils.getResourceDirectory(),
- CdmPersistentXMLSource.CDMSOURCE_FILE_NAME,
+ saveToXml(root.getDocument(),
+ CdmPersistentSourceUtils.getResourceDirectory(),
+ CdmPersistentXMLSource.CDMSOURCE_FILE_NAME,
XmlHelp.prettyFormat );
return NewInstance(strRemoteSourceName) ;
}
-
+
/**
* @param strDataSourceName
* @param dataSource
- * @param code
+ * @param code
* @return
* the updated dataSource, null if not succesful
*/
CdmPersistentSourceUtils.delete(CdmPersistentSourceUtils.getBeanName(strRemoteSourceName,REMOTESOURCE_BEAN_POSTFIX));
return save(strRemoteSourceName, remoteSource);
}
-
+
/**
* Tests existing of the datsource in the according config file.
* @return true if a datasource with the given name exists in the according datasource config file.
Element bean = CdmPersistentSourceUtils.getCdmSourceBeanXml(strRemoteSourceName, REMOTESOURCE_BEAN_POSTFIX);
return (bean != null);
}
-
+
/**
* Returns a list of all datasources stored in the datasource config file
* @return all existing data sources
- * @throws CdmRemoteSourceException
+ * @throws CdmRemoteSourceException
*/
@SuppressWarnings("unchecked")
static public List<CdmPersistentRemoteSource> getAllRemoteSources() throws CdmRemoteSourceException{
List<CdmPersistentRemoteSource> remoteSources = new ArrayList<CdmPersistentRemoteSource>();
-
+
Element root = getBeansRoot(CdmPersistentSourceUtils.getCdmSourceInputStream());
if (root == null){
return null;
}else{
List<Element> lsChildren = root.getChildren("bean", root.getNamespace());
-
+
for (Element elBean : lsChildren){
String strId = elBean.getAttributeValue("id");
if (strId != null && strId.endsWith(REMOTESOURCE_BEAN_POSTFIX)){
}
return remoteSources;
}
-
+
@Override
public String toString(){
if (getName() != null){
* The contents of this file are subject to the Mozilla Public License Version 1.1
* See LICENSE.TXT at the top of this package for the full license terms.
*/
-package eu.etaxonomy.cdm.remote;
+package eu.etaxonomy.taxeditor.remoting.source;
import eu.etaxonomy.cdm.model.name.NomenclaturalCode;
/**
* Copyright (C) 2014 EDIT
-* European Distributed Institute of Taxonomy
+* European Distributed Institute of Taxonomy
* http://www.e-taxonomy.eu
-*
+*
* The contents of this file are subject to the Mozilla Public License Version 1.1
* See LICENSE.TXT at the top of this package for the full license terms.
*/
-package eu.etaxonomy.cdm.remote;
+package eu.etaxonomy.taxeditor.remoting.source;
import java.util.Map;
import org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean;
-import eu.etaxonomy.cdm.api.service.IDatabaseService;
+import eu.etaxonomy.cdm.api.service.IUserService;
import eu.etaxonomy.cdm.config.CdmSource;
import eu.etaxonomy.cdm.config.CdmSourceException;
-import eu.etaxonomy.cdm.database.DatabaseTypeEnum;
import eu.etaxonomy.cdm.model.metadata.CdmMetaData.MetaDataPropertyName;
import eu.etaxonomy.cdm.model.name.NomenclaturalCode;
/**
- * Base class representing a CDM remote source.
+ * Base class representing a CDM remote source.
* This class handles all the configuration relating to the remoting aspect of
* a CDM source.
*
protected static final NomenclaturalCode DEFAULT_NOMENCLATURAL_CODE = NomenclaturalCode.ICNAFP;
private String contextPath;
private String baseUrl;
-
- private IDatabaseService databaseService;
-
+
+ private IUserService userService;
+
/**
* Constructs a CdmRemoteSourceBase object with default values.
- *
+ *
*/
protected CdmRemoteSourceBase() {
setName(DEFAULT_NAME);
setContextPath(DEFAULT_CONTEXT_PATH);
setNomenclaturalCode(DEFAULT_NOMENCLATURAL_CODE);
}
-
+
/**
* Constructs a CdmRemoteSourceBase
- *
+ *
* @param name
* @param server
* @param port
* @param contextPath
* @param nomenclaturalCode
*/
- protected CdmRemoteSourceBase(String name, String server, int port, String contextPath, NomenclaturalCode nomenclaturalCode) {
+ public CdmRemoteSourceBase(String name, String server, int port, String contextPath, NomenclaturalCode nomenclaturalCode) {
setName(name);
setServer(server);
setPort(port);
setContextPath(contextPath);
- setNomenclaturalCode(nomenclaturalCode);
+ setNomenclaturalCode(nomenclaturalCode);
initDatabaseConnection();
}
-
+
protected void initDatabaseConnection() {
if(getContextPath() == null || getContextPath().equals("")) {
setBaseUrl("http://" + getServer() + ":" + String.valueOf(getPort()));
} else {
setBaseUrl("http://" + getServer() + ":" + String.valueOf(getPort()) + "/" + getContextPath());
- }
+ }
// the database service needs to be initialised (before the spring
- // application context initialsation) since it is required to
+ // application context initialsation) since it is required to
// to make queries related to the source database
HttpInvokerProxyFactoryBean proxy = new HttpInvokerProxyFactoryBean();
- proxy.setServiceInterface(IDatabaseService.class);
- proxy.setServiceUrl(baseUrl + "/remoting/database.service");
+ proxy.setServiceInterface(IUserService.class);
+ // FIXME:Remoting need to fix this hardcoded url and make it configurable somehow
+ proxy.setServiceUrl(baseUrl + "/remoting-public/user.service");
proxy.afterPropertiesSet();
- databaseService = (IDatabaseService) proxy.getObject();
+ userService = (IUserService) proxy.getObject();
}
-
+
/* (non-Javadoc)
* @see eu.etaxonomy.cdm.remote.ICdmRemoteSource#getBaseUrl()
*/
}
/**
- * Sets the base url for the http-invoker services as listed in
+ * Sets the base url for the http-invoker services as listed in
* httpInvokerServicesClients.xml.
- * e.g. for 'http://127.0.0.1:8080/col/remoting/common.service', the
+ * e.g. for 'http://127.0.0.1:8080/col/remoting/common.service', the
* base url would be 'http://127.0.0.1:8080/col'
- *
+ *
* @param baseUrl
*/
public void setBaseUrl(String baseUrl) {
/**
* Sets the context path.
- * e.g. for 'http://127.0.0.1:8080/col/remoting/common.service', the
+ * e.g. for 'http://127.0.0.1:8080/col/remoting/common.service', the
* context path would be 'col'
- *
+ *
* @param contextPath
*/
public void setContextPath(String contextPath) {
*/
@Override
public String getDbSchemaVersion() throws CdmSourceException {
- return databaseService.getDbSchemaVersion();
+ return userService.getDbSchemaVersion();
}
*/
@Override
public boolean isDbEmpty() throws CdmSourceException {
- return databaseService.isDbEmpty();
+ return userService.isDbEmpty();
}
*/
@Override
public boolean checkConnection() throws CdmSourceException {
- // assuming that database service works implies
+ // assuming that database service works implies
// the connection is up
- // if no exception is thrown then we assume that the
+ // if no exception is thrown then we assume that the
// connection is up
// FIXME:Remoting is this really correct?
- databaseService.getDbSchemaVersion();
+ userService.getDbSchemaVersion();
return true;
}
*/
@Override
public String getConnectionMessage() {
- return "Conncting to Remote CDM Server " + getName();
+ return "Connecting to Remote CDM Instance " + getName() + ":" + getPort() + "/" + getContextPath();
}
-
+
@Override
public Map<MetaDataPropertyName, String> getMetaDataMap() throws CdmSourceException {
- return databaseService.getCdmMetadataMap();
+ return userService.getCdmMetadataMap();
}
/**
*
*/
-package eu.etaxonomy.cdm.remote;
+package eu.etaxonomy.taxeditor.remoting.source;
/**
*
--- /dev/null
+// $Id$
+/**
+ * Copyright (C) 2015 EDIT
+ * European Distributed Institute of Taxonomy
+ * http://www.e-taxonomy.eu
+ *
+ * The contents of this file are subject to the Mozilla Public License Version 1.1
+ * See LICENSE.TXT at the top of this package for the full license terms.
+ */
+package eu.etaxonomy.taxeditor.remoting.source;
+
+import java.io.IOException;
+import java.net.Socket;
+import java.util.ArrayList;
+import java.util.Collections;
+import java.util.Comparator;
+import java.util.List;
+
+import org.apache.http.HttpEntity;
+import org.apache.http.HttpResponse;
+import org.apache.http.client.ClientProtocolException;
+import org.apache.http.client.HttpClient;
+import org.apache.http.client.ResponseHandler;
+import org.apache.http.client.methods.HttpGet;
+import org.apache.http.impl.client.DefaultHttpClient;
+import org.apache.http.util.EntityUtils;
+import org.apache.log4j.Logger;
+import org.json.JSONArray;
+import org.json.JSONException;
+import org.json.JSONObject;
+
+import eu.etaxonomy.cdm.config.CdmSourceException;
+import eu.etaxonomy.cdm.database.CdmPersistentDataSource;
+import eu.etaxonomy.cdm.database.ICdmDataSource;
+import eu.etaxonomy.taxeditor.remoting.server.CDMServerException;
+
+/**
+ * @author cmathew
+ * @date 20 Jan 2015
+ *
+ */
+public class CdmServerInfo {
+ public static final Logger logger = Logger.getLogger(CdmServerInfo.class);
+
+ private final static String CDMSERVER_PREFIX = "cdmserver";
+ private final static String NAME_PRODUCTION = "edit-production";
+ private final static String SERVER_PRODUCTION = "dev.e-taxonomy.eu";
+
+ private final static String NAME_INTEGRATION = "edit-integration";
+ private final static String SERVER_INTEGRATION = "int.e-taxonomy.eu";
+
+ private final static String NAME_DEMO_1 = "edit-WS I";
+ private final static String SERVER_DEMO_1 = "160.45.63.230";
+
+ private final static String NAME_DEMO_2 = "edit-WS II";
+ private final static String SERVER_DEMO_2 = "160.45.63.231";
+
+ private final static String NAME_TEST = "edit-test";
+ private final static String SERVER_TEST = "test.e-taxonomy.eu";
+
+ public final static String SERVER_LOCALHOST = "localhost";
+ private final static String NAME_LOCALHOST = "localhost";
+ public final static String NAME_LOCALHOST_MGD = "localhost mgd.";
+
+ private final static String NAME_LOCALHOST_DEV = "localhost-dev";
+ private final static String NAME_INSTANCE_LOCALHOST_DEV = "local-dev";
+ private final static String SERVER_LOCALHOST_DEV = "localhost";
+ private final static int PORT_LOCALHOST_DEV = 8080;
+ private final static String BASEPATH_LOCALHOST_DEV = "";
+
+ private final String name;
+ private final String server;
+ private final int port;
+ private final List<CdmInstanceInfo> instances;
+
+ private static List<CdmServerInfo> cdmServerInfoList;
+
+ public CdmServerInfo(String name, String server, int port) {
+ this.name = name;
+ this.server = server;
+ this.port = port;
+ instances = new ArrayList<CdmInstanceInfo>();
+ }
+
+
+ public CdmInstanceInfo addInstance(String name, String basePath) {
+ CdmInstanceInfo cii = new CdmInstanceInfo(name, basePath);
+ instances.add(cii);
+ return cii;
+
+ }
+
+ public boolean isLocalhost() {
+ return name.startsWith(SERVER_LOCALHOST);
+ }
+
+ public boolean isLocalhostMgd() {
+ return NAME_LOCALHOST_MGD.equals(name);
+ }
+
+ public void refreshInstances() throws CDMServerException {
+ instances.clear();
+ if(isLocalhostMgd()) {
+ addInstancesFromDataSourcesConfig();
+ } else {
+ addInstancesViaHttp();
+ }
+ Collections.sort(instances, new Comparator<CdmInstanceInfo>() {
+ @Override
+ public int compare(CdmInstanceInfo cii1, CdmInstanceInfo cii2)
+ {
+ return cii1.getName().toString().compareTo(cii2.getName().toString());
+ }
+ });
+ }
+
+ public void addInstancesViaHttp() throws CDMServerException {
+ String url = "http://" + server + ":" + String.valueOf(port) + "/" + CDMSERVER_PREFIX + "/instances.jsp";
+
+ HttpClient client = new DefaultHttpClient();
+ HttpGet httpGet = new HttpGet(url);
+
+ logger.info("Executing request " + httpGet.getRequestLine());
+
+ // Create a custom response handler
+ ResponseHandler<String> responseHandler = new ResponseHandler<String>() {
+
+ @Override
+ public String handleResponse(
+ final HttpResponse response) throws ClientProtocolException, IOException {
+ int status = response.getStatusLine().getStatusCode();
+ if (status >= 200 && status < 300) {
+ HttpEntity entity = response.getEntity();
+ return entity != null ? EntityUtils.toString(entity) : null;
+ } else {
+ throw new ClientProtocolException("Unexpected response status: " + status);
+ }
+ }
+
+ };
+ String responseBody = null;
+ try {
+ responseBody = client.execute(httpGet, responseHandler);
+ } catch (ClientProtocolException e) {
+ throw new CDMServerException(e);
+ } catch (IOException e) {
+ throw new CDMServerException(e);
+ }
+
+
+ if(responseBody != null) {
+ try {
+ JSONArray array = new JSONArray(responseBody);
+ for(int i=0;i<array.length();i++) {
+ JSONObject instance = (JSONObject)array.get(i);
+ if(instance != null) {
+ JSONObject conf = (JSONObject)instance.get("configuration");
+ if(conf != null) {
+ String instanceName = conf.getString("instanceName");
+ // we need to remove the first (char) forward slash from
+ // the base path
+ String basePath = conf.getString("basePath").substring(1);
+ addInstance(instanceName, basePath);
+ logger.info("Added instance with name : " + instanceName + ", basePath : " + basePath);
+ }
+ }
+ }
+ } catch (JSONException e) {
+ throw new CDMServerException(e);
+ }
+ }
+ }
+
+ public void addInstancesFromDataSourcesConfig() {
+
+ for(ICdmDataSource dataSource : CdmPersistentDataSource.getAllDataSources()){
+ logger.warn("Adding local instance " + dataSource.getName());
+ addInstance(dataSource.getName(), dataSource.getName());
+ }
+
+ }
+
+ public String toString(String instanceName, int port) {
+ return server + ":" + String.valueOf(port) + "/" + instanceName;
+ }
+
+ public CdmInstanceInfo getInstanceFromName(String instanceName) {
+ if(instanceName == null) {
+ return null;
+ }
+
+ for(CdmInstanceInfo instance : instances) {
+ if(instance.getName() != null && instance.getName().equals(instanceName)) {
+ return instance;
+ }
+ }
+ return null;
+ }
+
+ public CdmRemoteSource getCdmRemoteSource(CdmInstanceInfo instance, int port) {
+ if(instance != null) {
+ return CdmRemoteSource.NewInstance(name,
+ server,
+ port,
+ instance.getBasePath(),
+ null);
+ }
+ return null;
+ }
+
+ public boolean pingServer(){
+ try {
+ Socket s = new Socket(server, port);
+ logger.info("[CDM-Server] Available @ " + server + ":" + port );
+ return true;
+ } catch (IOException ioe) {
+
+ }
+ return false;
+ }
+
+ public boolean pingInstance(CdmInstanceInfo instance, int port) throws CDMServerException {
+
+ ICdmRemoteSource crs = getCdmRemoteSource(instance, port);
+ try {
+ if(crs != null && crs.checkConnection()) {
+ logger.info("[CDM-Server] Running @ " + server + ":" + port + " for instance " + instance);
+ return true;
+ }
+ } catch (CdmSourceException e) {
+ throw new CDMServerException(e);
+ }
+
+ return false;
+ }
+
+ public static List<CdmServerInfo> getCdmServers() {
+ if(cdmServerInfoList == null) {
+ cdmServerInfoList = new ArrayList<CdmServerInfo>();
+ //cdmServerInfoList.add(new CdmServerInfo(NAME_PRODUCTION, SERVER_PRODUCTION, 80));
+ //cdmServerInfoList.add(new CdmServerInfo(NAME_INTEGRATION, SERVER_INTEGRATION, 80));
+ cdmServerInfoList.add(new CdmServerInfo(NAME_DEMO_1, SERVER_DEMO_1, 80));
+ cdmServerInfoList.add(new CdmServerInfo(NAME_DEMO_2, SERVER_DEMO_2, 80));
+ cdmServerInfoList.add(new CdmServerInfo(NAME_TEST, SERVER_TEST, 80));
+ cdmServerInfoList.add(new CdmServerInfo(NAME_LOCALHOST, SERVER_LOCALHOST, 8080));
+ cdmServerInfoList.add(new CdmServerInfo(NAME_LOCALHOST_MGD, SERVER_LOCALHOST,8080));
+ }
+ return cdmServerInfoList;
+ }
+
+ public String getName() {
+ return name;
+ }
+
+ public String getServer() {
+ return server;
+ }
+
+
+ public int getPort() {
+ return port;
+ }
+
+
+ public List<CdmInstanceInfo> getInstances() throws CDMServerException {
+ if(instances.isEmpty()) {
+ refreshInstances();
+ }
+ return instances;
+ }
+
+ public static CdmRemoteSource getDevServerRemoteSource() {
+ String value = System.getProperty("cdm.server.dev.port");
+ boolean available = false;
+ CdmInstanceInfo devInstance = null;
+ if(value != null && !value.isEmpty()) {
+ int devPort = Integer.valueOf(value);
+ CdmServerInfo devCii = new CdmServerInfo(NAME_LOCALHOST_DEV, SERVER_LOCALHOST_DEV, devPort);
+ try {
+ devInstance = devCii.addInstance(NAME_INSTANCE_LOCALHOST_DEV, BASEPATH_LOCALHOST_DEV);
+ available = devCii.pingInstance(devInstance, devPort);
+ if(available) {
+ return devCii.getCdmRemoteSource(devInstance, devPort);
+ }
+ } catch (Exception e) {
+
+ }
+ }
+ return null;
+ }
+
+ public class CdmInstanceInfo {
+ private final String name;
+
+ /**
+ * The full path of the instance including the the prefix (if any).
+ * E.g. for an EDIT instance this would be something like "cdmserver/remoting"
+ * For a managed local server this would simply be "remoting"
+ */
+ private final String basePath;
+
+
+ public CdmInstanceInfo(String name, String basePath) {
+ this.name = name;
+ this.basePath = basePath;
+ }
+
+
+ public String getName() {
+ return name;
+ }
+
+ public String getBasePath() {
+ return basePath;
+ }
+ }
+}
* The contents of this file are subject to the Mozilla Public License Version 1.1
* See LICENSE.TXT at the top of this package for the full license terms.
*/
-package eu.etaxonomy.cdm.remote;
+package eu.etaxonomy.taxeditor.remoting.source;
import eu.etaxonomy.cdm.config.ICdmSource;
--- /dev/null
+// $Id$
+/**
+* Copyright (C) 2014 EDIT
+* European Distributed Institute of Taxonomy
+* http://www.e-taxonomy.eu
+*
+* The contents of this file are subject to the Mozilla Public License Version 1.1
+* See LICENSE.TXT at the top of this package for the full license terms.
+*/
+package eu.etaxonomy.taxeditor.service;
+
+import java.util.List;
+import java.util.UUID;
+
+import org.springframework.stereotype.Component;
+
+import eu.etaxonomy.cdm.api.application.CdmApplicationRemoteController;
+import eu.etaxonomy.cdm.api.application.CdmApplicationState;
+import eu.etaxonomy.cdm.model.common.CdmBase;
+import eu.etaxonomy.taxeditor.session.ICdmEntitySession;
+
+/**
+ * @author cmathew
+ * @date 14 Oct 2014
+ *
+ */
+@Component
+public class CachedCommonServiceImpl implements ICachedCommonService {
+
+
+ private static boolean cacheEnabled = true;
+
+ public static boolean isCacheEnabled() {
+ return cacheEnabled;
+ }
+
+ public static void setCacheEnabled(boolean cacheEnabled) {
+ CachedCommonServiceImpl.cacheEnabled = cacheEnabled;
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.remoting.service.ICachedCommonService#find(java.lang.Class, int)
+ */
+ @Override
+ public CdmBase find(Class<? extends CdmBase> clazz, int id) {
+ CdmBase cdmEntity = CdmApplicationState.getCurrentAppConfig().getCommonService().find(clazz, id, getPropertyPaths(clazz));
+ if(cdmEntity == null) {
+ throw new NullPointerException("CDM Entity of type " + clazz.getName() + " with id " + id + " is null.");
+ }
+ return cdmEntity;
+
+ }
+
+
+ private List<String> getPropertyPaths(Object obj) {
+ List<String> propertyPaths = null;
+ ICdmEntitySession cdmEntitySession =
+ ((CdmApplicationRemoteController)CdmApplicationState.getCurrentAppConfig()).getCdmEntitySessionManager().getActiveSession();
+ if(cdmEntitySession != null) {
+ propertyPaths = cdmEntitySession.getPropertyPaths(obj);
+ }
+ return propertyPaths;
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.service.ICachedCommonService#initializeCollection(java.util.UUID, java.lang.String)
+ */
+ @Override
+ public Object initializeCollection(UUID ownerUuid, String fieldName) {
+ return CdmApplicationState.getCurrentAppConfig().getCommonService().initializeCollection(ownerUuid, fieldName, getPropertyPaths(fieldName));
+ }
+
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.remoting.service.ICachedCommonService#isEmpty(org.hibernate.collection.spi.PersistentCollection)
+ */
+ @Override
+ public boolean isEmpty(UUID ownerUuid, String fieldName) {
+ return CdmApplicationState.getCurrentAppConfig().getCommonService().isEmpty(ownerUuid, fieldName);
+
+ }
+
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.remoting.service.ICachedCommonService#size(org.hibernate.collection.spi.PersistentCollection)
+ */
+ @Override
+ public int size(UUID ownerUuid, String fieldName) {
+ return CdmApplicationState.getCurrentAppConfig().getCommonService().size(ownerUuid, fieldName);
+ }
+
+
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.remoting.service.ICachedCommonService#contains(org.hibernate.collection.spi.PersistentCollection, java.lang.Object)
+ */
+ @Override
+ public boolean contains(UUID ownerUuid, String fieldName, Object element) {
+ return CdmApplicationState.getCurrentAppConfig().getCommonService().contains(ownerUuid, fieldName, element);
+ }
+
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.remoting.service.ICachedCommonService#containsKey(org.hibernate.collection.spi.PersistentCollection, java.lang.Object)
+ */
+ @Override
+ public boolean containsKey(UUID ownerUuid, String fieldName, Object key) {
+ return CdmApplicationState.getCurrentAppConfig().getCommonService().containsKey(ownerUuid, fieldName, key);
+ }
+
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.remoting.service.ICachedCommonService#containsValue(org.hibernate.collection.spi.PersistentCollection, java.lang.Object)
+ */
+ @Override
+ public boolean containsValue(UUID ownerUuid, String fieldName, Object element) {
+ return CdmApplicationState.getCurrentAppConfig().getCommonService().containsValue(ownerUuid, fieldName, element);
+ }
+
+
+
+
+
+
+}
--- /dev/null
+// $Id$
+/**
+ * Copyright (C) 2015 EDIT
+ * European Distributed Institute of Taxonomy
+ * http://www.e-taxonomy.eu
+ *
+ * The contents of this file are subject to the Mozilla Public License Version 1.1
+ * See LICENSE.TXT at the top of this package for the full license terms.
+ */
+package eu.etaxonomy.taxeditor.service;
+
+import java.io.IOException;
+
+import org.apache.commons.codec.binary.Base64;
+import org.apache.commons.httpclient.methods.PostMethod;
+import org.springframework.remoting.httpinvoker.CommonsHttpInvokerRequestExecutor;
+import org.springframework.remoting.httpinvoker.HttpInvokerClientConfiguration;
+import org.springframework.security.core.Authentication;
+import org.springframework.security.core.context.SecurityContext;
+
+import eu.etaxonomy.cdm.api.application.CdmApplicationState;
+
+/**
+ * @author cmathew
+ * @date 27 Jan 2015
+ *
+ */
+public class CdmAuthenticatedHttpInvokerRequestExecutor extends CommonsHttpInvokerRequestExecutor {
+
+ @Override
+ protected PostMethod createPostMethod(HttpInvokerClientConfiguration config) throws IOException {
+ PostMethod postMethod = super.createPostMethod(config);
+
+ SecurityContext securityContext = CdmApplicationState.getCurrentSecurityContext();
+ if(securityContext != null) {
+ Authentication auth = securityContext.getAuthentication();
+ if ((auth != null) && (auth.getName() != null) &&
+ (auth.getCredentials() != null)) {
+ String base64 = auth.getName() + ":" + auth.getCredentials().toString();
+ postMethod.setRequestHeader("Authorization", "Basic " +
+ new String(Base64.encodeBase64(base64.getBytes())));
+ }
+ }
+ return postMethod;
+ }
+}
\ No newline at end of file
--- /dev/null
+package eu.etaxonomy.taxeditor.service;
+
+public class CdmServiceInterceptorException extends RuntimeException {
+
+ public CdmServiceInterceptorException(String message) {
+ super(message);
+ }
+
+ public CdmServiceInterceptorException(Exception ex) {
+ super(ex);
+ }
+
+}
--- /dev/null
+package eu.etaxonomy.taxeditor.service;
+
+import java.io.IOException;
+import java.io.OutputStream;
+
+import org.apache.log4j.Logger;
+import org.springframework.remoting.httpinvoker.HttpInvokerClientConfiguration;
+import org.springframework.remoting.support.RemoteInvocation;
+import org.springframework.remoting.support.RemoteInvocationResult;
+import org.springframework.stereotype.Component;
+
+import eu.etaxonomy.cdm.api.application.CdmApplicationRemoteController;
+import eu.etaxonomy.cdm.api.application.CdmApplicationState;
+import eu.etaxonomy.cdm.api.service.UpdateResult;
+import eu.etaxonomy.taxeditor.session.ICdmEntitySessionManager;
+
+@Component
+public class CdmServiceRequestExecutor extends CdmAuthenticatedHttpInvokerRequestExecutor {
+
+ private static final Logger logger = Logger.getLogger(CdmServiceRequestExecutor.class);
+
+ private ICdmEntitySessionManager cdmEntitySessionManager ;
+
+ private RemoteInvocation currentRemoteInvocation;
+
+
+
+ @Override
+ protected void writeRemoteInvocation(RemoteInvocation invocation, OutputStream os) throws IOException {
+ if(cdmEntitySessionManager == null) {
+ cdmEntitySessionManager =
+ ((CdmApplicationRemoteController)CdmApplicationState.getCurrentAppConfig()).getCdmEntitySessionManager();
+ }
+ currentRemoteInvocation = invocation;
+ super.writeRemoteInvocation(invocation, os);
+ }
+
+ @Override
+ protected RemoteInvocationResult doExecuteRequest(HttpInvokerClientConfiguration config,
+ java.io.ByteArrayOutputStream baos)
+ throws java.io.IOException,
+ java.lang.ClassNotFoundException {
+ RemoteInvocationResult rir = fromCache(currentRemoteInvocation);
+
+ // if rir is not null at this point we assume that the
+ // the object has already been loaded in the cache and
+ // does not need to be reloaded
+
+ if(rir == null) {
+ logger.info("Remote invoking : " + currentRemoteInvocation.getMethodName() + "@" + config.getServiceUrl());
+ rir = super.doExecuteRequest(config, baos);
+ if(rir.getValue() != null && !rir.hasException()) {
+ if("merge".equals(currentRemoteInvocation.getMethodName()) ||
+ "save".equals(currentRemoteInvocation.getMethodName()) ||
+ "findWithUpdate".equals(currentRemoteInvocation.getMethodName())) {
+ rir = new RemoteInvocationResult(cdmEntitySessionManager.load(rir.getValue(), true));
+ } else if(rir.getValue() instanceof UpdateResult){
+ UpdateResult result = (UpdateResult)rir.getValue();
+ if(result.isOk()){
+ cdmEntitySessionManager.load(result, true);
+ }
+ } else {
+ rir = new RemoteInvocationResult(cdmEntitySessionManager.load(rir.getValue(), false));
+ }
+ }
+ cache(currentRemoteInvocation, rir);
+ }
+ currentRemoteInvocation = null;
+
+ return rir;
+ }
+
+ public void cache(RemoteInvocation ri, RemoteInvocationResult rir) {
+
+ }
+
+ public RemoteInvocationResult fromCache(RemoteInvocation ri) {
+ return null;
+ }
+}
--- /dev/null
+// $Id$
+/**
+ * Copyright (C) 2014 EDIT
+ * European Distributed Institute of Taxonomy
+ * http://www.e-taxonomy.eu
+ *
+ * The contents of this file are subject to the Mozilla Public License Version 1.1
+ * See LICENSE.TXT at the top of this package for the full license terms.
+ */
+package eu.etaxonomy.taxeditor.service;
+
+import java.util.UUID;
+
+import eu.etaxonomy.cdm.model.common.CdmBase;
+
+/**
+ * @author cmathew
+ * @date 14 Oct 2014
+ *
+ */
+public interface ICachedCommonService {
+
+ public CdmBase find(Class<? extends CdmBase> clazz, int id);
+
+
+ /**
+ * Initializes a collection or map.
+ *
+ * @param ownerUuid uuid of owner cdm entity
+ * @param fieldName field name of collection or map
+ * @return initialised collection or map
+ */
+ public Object initializeCollection(UUID ownerUuid, String fieldName);
+
+ /**
+ * Checks if a collection or map is empty.
+ *
+ * @param ownerUuid uuid of owner cdm entity
+ * @param fieldName field name of collection or map
+ * @return true if the collection of map is empty, else false
+ */
+ public boolean isEmpty(UUID ownerUuid, String fieldName);
+
+ /**
+ * Returns the size of requested collection or map.
+ *
+ * @param ownerUuid uuid of owner cdm entity
+ * @param fieldName field name of collection or map
+ * @return the size of the persistent collection
+ */
+ public int size(UUID ownerUuid, String fieldName);
+
+ /**
+ * Checks whether an object is contained within a persistent collection.
+ *
+ * @param ownerUuid uuid of owner cdm entity
+ * @param fieldName field name of collection or map
+ * @param element the element to check for
+ * @return true if the element exists in the collection, false o/w
+ */
+ public boolean contains(UUID ownerUuid, String fieldName, Object element);
+
+ /**
+ * Checks whether an index object exists within a persistent collection
+ * (usually a map)
+ *
+ * @param ownerUuid uuid of owner cdm entity
+ * @param fieldName field name of map
+ * @param key the index object to look for.
+ * @return true if the index object exists in the collection, false o/w
+ */
+ public boolean containsKey(UUID ownerUuid, String fieldName, Object key);
+
+ /**
+ * checks whether an value object exists within a persistent collection
+ * (usually a map)
+ *
+ * @param ownerUuid uuid of owner cdm entity
+ * @param fieldName field name of map
+ * @param key the value object to look for.
+ * @return true if the value object exists in the collection, false o/w
+ */
+ public boolean containsValue(UUID ownerUuid, String fieldName, Object element);
+
+
+
+
+}
\ No newline at end of file
--- /dev/null
+package eu.etaxonomy.taxeditor.service;
+
+import java.util.HashMap;
+import java.util.HashSet;
+import java.util.List;
+import java.util.Map;
+import java.util.Set;
+
+import org.apache.log4j.Logger;
+import org.springframework.remoting.support.RemoteInvocation;
+import org.springframework.remoting.support.RemoteInvocationResult;
+
+import eu.etaxonomy.cdm.api.cache.CdmServiceCacher;
+import eu.etaxonomy.cdm.model.common.DefinedTermBase;
+import eu.etaxonomy.cdm.model.common.TermType;
+
+
+public class TermServiceRequestExecutor extends CdmServiceRequestExecutor {
+ private static final Logger logger = Logger.getLogger(TermServiceRequestExecutor.class);
+
+ private static Map<TermType, RemoteInvocationResult> termTypeMap = new
+ HashMap<TermType, RemoteInvocationResult>();
+
+ private static CdmServiceCacher cdmServiceCacher;
+
+ public static void setDefaultCacher(CdmServiceCacher css) {
+ cdmServiceCacher = css;
+ }
+
+ @Override
+ public void cache(RemoteInvocation ri, RemoteInvocationResult rir) {
+ if(cdmServiceCacher != null) {
+ if(ri.getMethodName().equals("listByTermType")) {
+ if(ri.getArguments()[1] == null) {
+ Set<DefinedTermBase> terms = new HashSet<DefinedTermBase>();
+ if(rir.getValue() != null) {
+ terms.addAll((List<DefinedTermBase>)rir.getValue());
+
+ for(DefinedTermBase<?> term : terms) {
+ cdmServiceCacher.load(term);
+ }
+ termTypeMap.put((TermType)ri.getArguments()[0], rir);
+ }
+
+ }
+ }
+ } else {
+ logger.info("Default CdmServiceCacher is null. Cannot cache terms");
+ }
+ }
+
+
+ @Override
+ public RemoteInvocationResult fromCache(RemoteInvocation ri) {
+ return termTypeMap.get(ri.getArguments()[0]);
+ }
+
+
+
+}
--- /dev/null
+package eu.etaxonomy.taxeditor.session;
+
+public class CdmClientSessionException extends RuntimeException {
+
+ public CdmClientSessionException(String message) {
+ super(message);
+ }
+}
--- /dev/null
+// $Id$
+/**
+ * Copyright (C) 2014 EDIT
+ * European Distributed Institute of Taxonomy
+ * http://www.e-taxonomy.eu
+ *
+ * The contents of this file are subject to the Mozilla Public License Version 1.1
+ * See LICENSE.TXT at the top of this package for the full license terms.
+ */
+package eu.etaxonomy.taxeditor.session;
+
+import java.util.ArrayList;
+import java.util.Arrays;
+import java.util.Collection;
+import java.util.List;
+import java.util.Map;
+import java.util.UUID;
+
+import net.sf.ehcache.statistics.LiveCacheStatistics;
+
+import org.apache.log4j.Logger;
+
+import eu.etaxonomy.cdm.api.service.IService;
+import eu.etaxonomy.cdm.api.service.UpdateResult;
+import eu.etaxonomy.cdm.model.common.CdmBase;
+import eu.etaxonomy.taxeditor.remoting.cache.CdmTransientEntityCacher;
+import eu.etaxonomy.taxeditor.remoting.cache.EntityCacherDebugResult;
+
+
+/**
+ *
+ * NOTE : It would be nice to have this class performing merge / delete operations
+ * using services, but this is only possible if we can 'intelligently'
+ * get from a model class to the correspoding service class
+ * @author cmathew
+ * @date 20 Oct 2014
+ *
+ */
+
+public class CdmEntitySession implements ICdmEntitySession {
+
+ private static final Logger logger = Logger.getLogger(CdmEntitySession.class);
+
+ private final CdmEntitySessionManager cdmEntitySessionManager;
+
+ private final ICdmEntitySessionEnabled sessionOwner;
+
+ private CdmTransientEntityCacher cdmTransientEntityCacher;
+
+ private List<ICdmEntitySessionEnabled> changeObservers;
+
+
+ public CdmEntitySession(ICdmEntitySessionEnabled sessionOwner, CdmEntitySessionManager cdmEntitySessionManager) {
+ this.sessionOwner = sessionOwner;
+ this.cdmEntitySessionManager = cdmEntitySessionManager;
+ init(sessionOwner, cdmEntitySessionManager);
+ }
+
+ private void init(ICdmEntitySessionEnabled sessionOwner, CdmEntitySessionManager cdmEntitySessionManager) {
+ this.cdmTransientEntityCacher = new CdmTransientEntityCacher(sessionOwner, cdmEntitySessionManager);
+ this.changeObservers = new ArrayList<ICdmEntitySessionEnabled>();
+ cdmEntitySessionManager.addToOwnerSessionMap(sessionOwner, this);
+ }
+
+
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySession#load(java.lang.Object, boolean)
+ */
+ @Override
+ public <O extends Object> O load(O obj, boolean update) {
+ return cdmTransientEntityCacher.load(obj, update);
+ }
+
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySession#load(eu.etaxonomy.cdm.model.common.CdmBase, boolean)
+ */
+ @Override
+ public <T extends CdmBase> T load(T cdmBase, boolean update) {
+ return (T)cdmTransientEntityCacher.load(cdmBase, update);
+ }
+
+
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySession#load(eu.etaxonomy.cdm.api.service.UpdateResult, boolean)
+ */
+ @Override
+ public UpdateResult load(UpdateResult updateResult, boolean update) {
+ return cdmTransientEntityCacher.load(updateResult, update);
+ }
+
+ @Override
+ public <T extends CdmBase> void update() {
+ Collection<T> rootEntities = getRootEntities();
+ if(rootEntities != null) {
+ for(T rootEntity : rootEntities) {
+ load(rootEntity, true);
+ }
+ }
+ }
+
+// @Override
+// public <T extends ICdmBase> void update(T cdmBase, Set<CdmBase> affectedObjects) {
+// addEvent(cdmBase, affectedObjects, EventType.UPDATE);
+// }
+//
+// @Override
+// public <T extends ICdmBase> void update(T cdmBase, CdmBase affectedObject) {
+// Set<CdmBase> set = new HashSet<CdmBase>();
+// set.add(affectedObject);
+// addEvent(cdmBase, set, EventType.UPDATE);
+// }
+//
+//
+// @Override
+// public <T extends ICdmBase> void delete(T cdmBase, Set<CdmBase> affectedObjects) {
+// addEvent(cdmBase, affectedObjects, EventType.DELETE);
+// }
+//
+// @Override
+// public <T extends ICdmBase> void delete(Set<T> cdmBases, Set<CdmBase> affectedObjects) {
+// addEvent(cdmBases, affectedObjects, EventType.DELETE);
+// }
+
+
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySession#debug(eu.etaxonomy.cdm.model.common.CdmBase)
+ */
+ @Override
+ public <T extends CdmBase> EntityCacherDebugResult debug(T cdmBase) {
+ return debug(Arrays.asList(cdmBase));
+ }
+
+
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySession#debug(java.util.List)
+ */
+ @Override
+ public <T extends CdmBase> EntityCacherDebugResult debug(Collection<T> cdmBases) {
+ EntityCacherDebugResult entityCacherDebugResult =
+ new EntityCacherDebugResult(cdmTransientEntityCacher, cdmBases);
+ return entityCacherDebugResult;
+ }
+
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySession#debug()
+ */
+ @Override
+ public <T extends CdmBase> EntityCacherDebugResult debug() {
+ return debug(getRootEntities());
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySession#load(java.util.Collection)
+ */
+ @Override
+ public <T extends CdmBase> Collection<T> load(Collection<T> cdmBaseList, boolean update) {
+ return cdmTransientEntityCacher.load(cdmBaseList, update);
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySession#setEntitiesAsLatest()
+ */
+ @Override
+ public void setEntitiesAsLatest() {
+ //FIXME:Remoting need to think more about whether we really need this
+ // List<CdmBase> entities = cdmTransientEntityCacher.getAllEntities();
+ // for(CdmBase entity : entities) {
+ // cdmEntitySessionManager.setEntityAsLatest(entity);
+ // }
+ }
+
+
+ @Override
+ public void bind() {
+ logger.info("Binding session with owner " + sessionOwner.toString());
+ if(!cdmEntitySessionManager.contains(sessionOwner)) {
+ init(sessionOwner, cdmEntitySessionManager);
+ }
+ cdmEntitySessionManager.bind(sessionOwner);
+
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySession#dispose()
+ */
+ @Override
+ public void dispose() {
+
+ cdmTransientEntityCacher.dispose();
+ changeObservers.clear();
+ cdmEntitySessionManager.remove(sessionOwner);
+
+ }
+
+
+// /* (non-Javadoc)
+// * @see eu.etaxonomy.taxeditor.session.ICdmEntitySession#commit()
+// */
+// @Override
+// public void addEvent(ICdmBase cdmBase, Set<CdmBase> affectedObjects, EventType eventType) {
+// affectedObjects = (Set<CdmBase>) load(affectedObjects, true);
+// CdmDataChangeEvent cdce = CdmDataChangeEvent.NewInstance((CdmBase)cdmBase, affectedObjects, eventType);
+// CdmPostDataChangeObservableListener.getDefault().notifyObservers(cdce);
+// }
+
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySession#load(java.util.UUID, java.lang.Class)
+ */
+ @Override
+ public <T extends CdmBase> T remoteLoad(IService<T> service, UUID uuid) {
+ T cdmBase = service.load(uuid);
+ return load(cdmBase, false);
+ }
+
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySession#load(eu.etaxonomy.cdm.api.service.IService, java.util.UUID, java.util.List)
+ */
+ @Override
+ public <T extends CdmBase> T remoteLoad(IService<T> service, UUID uuid, List<String> propertyPaths) {
+ T cdmBase = service.load(uuid, propertyPaths);
+ return load(cdmBase, false);
+ }
+
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySession#save(eu.etaxonomy.cdm.api.service.IService, eu.etaxonomy.cdm.model.common.CdmBase)
+ */
+ @Override
+ public <T extends CdmBase> UUID remoteSave(IService<T> service, T cdmBase) {
+ UUID uuid = service.save(cdmBase).getUuid();
+ load(cdmBase,false);
+ return uuid;
+ }
+
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySession#update(eu.etaxonomy.cdm.api.service.IService, eu.etaxonomy.cdm.model.common.CdmBase)
+ */
+ @Override
+ public <T extends CdmBase> T remoteUpdate(IService<T> service, T cdmBase) {
+ T mergedCdmBase = service.merge(cdmBase);
+ return mergedCdmBase;
+ }
+
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySession#isActive()
+ */
+ @Override
+ public boolean isActive() {
+ return cdmEntitySessionManager.getActiveSession() == this;
+ }
+
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySession#getOwner()
+ */
+ @Override
+ public ICdmEntitySessionEnabled getOwner() {
+ return sessionOwner;
+ }
+
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySession#getNoOfObjectsInCache()
+ */
+ @Override
+ public LiveCacheStatistics getCacheStatistics() {
+ return cdmTransientEntityCacher.getCacheStatistics();
+ }
+
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySession#getRootEntities()
+ */
+ @Override
+ public <T extends CdmBase> Collection<T> getRootEntities() {
+ return sessionOwner.getRootEntities();
+ }
+
+ public CdmTransientEntityCacher getCacher() {
+ return cdmTransientEntityCacher;
+ }
+
+ @Override
+ public List<String> getPropertyPaths(Object obj) {
+ Map<Object, List<String>> propertyPathsMap = sessionOwner.getPropertyPathsMap();
+ if(propertyPathsMap == null || propertyPathsMap.isEmpty()) {
+ return null;
+ }
+ return propertyPathsMap.get(obj);
+ }
+
+}
--- /dev/null
+// $Id$
+/**
+ * Copyright (C) 2014 EDIT
+ * European Distributed Institute of Taxonomy
+ * http://www.e-taxonomy.eu
+ *
+ * The contents of this file are subject to the Mozilla Public License Version 1.1
+ * See LICENSE.TXT at the top of this package for the full license terms.
+ */
+package eu.etaxonomy.taxeditor.session;
+
+import java.util.ArrayList;
+import java.util.Collection;
+import java.util.HashMap;
+import java.util.HashSet;
+import java.util.List;
+import java.util.Map;
+import java.util.Set;
+
+import org.apache.log4j.Logger;
+import org.springframework.stereotype.Component;
+
+import eu.etaxonomy.cdm.api.service.UpdateResult;
+import eu.etaxonomy.cdm.model.common.CdmBase;
+
+/**
+ * @author cmathew
+ * @date 16 Oct 2014
+ *
+ */
+@Component
+public class CdmEntitySessionManager implements ICdmEntitySessionManager {
+ private static final Logger logger = Logger.getLogger(CdmEntitySessionManager.class);
+
+ private final Map<ICdmEntitySessionEnabled, ICdmEntitySession> ownerSessionMap =
+ new HashMap<ICdmEntitySessionEnabled, ICdmEntitySession>();
+
+ private final List<ICdmEntitySessionManagerObserver> sessionObservers = new ArrayList<ICdmEntitySessionManagerObserver>();
+
+ private ICdmEntitySession activeSession;
+
+ private NullSession nullSession;
+
+ @Override
+ public ICdmEntitySession getNullSession() {
+ return nullSession;
+ }
+
+ @Override
+ public ICdmEntitySession newSession(ICdmEntitySessionEnabled sessionOwner, boolean setAsActive) {
+ ICdmEntitySession session = ownerSessionMap.get(sessionOwner);
+ if(session == null) {
+ session = new CdmEntitySession(sessionOwner, this);
+ addToOwnerSessionMap(sessionOwner, session);
+ }
+
+ if(setAsActive) {
+ setActiveSession(session);
+ }
+
+ return session;
+ }
+
+ @Override
+ public ICdmEntitySession bindNullSession(ICdmEntitySessionEnabled sessionOwner) {
+
+ if(nullSession == null) {
+ nullSession = new NullSession(sessionOwner, this);
+ } else {
+ nullSession.setOwner(sessionOwner);
+ }
+
+ setActiveSession(nullSession);
+
+ return nullSession;
+ }
+
+ @Override
+ public ICdmEntitySession getActiveSession() {
+ return activeSession;
+ }
+
+ private void setActiveSession(ICdmEntitySession activeSession) {
+ this.activeSession = activeSession;
+ notifyObservers();
+ }
+
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySessionManager#getSessions()
+ */
+ @Override
+ public Collection<ICdmEntitySession> getSessions() {
+ return ownerSessionMap.values();
+ }
+
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySessionManager#bind(eu.etaxonomy.taxeditor.session.ISessionEventListener)
+ */
+ @Override
+ public void bind(ICdmEntitySessionEnabled sessionOwner) {
+ if(sessionOwner == null) {
+ setActiveSession(null);
+ return;
+ }
+ ICdmEntitySession session = ownerSessionMap.get(sessionOwner);
+ if(session == null) {
+ throw new CdmClientSessionException("Trying to bind session which does not exist");
+ }
+
+ setActiveSession(session);
+
+ }
+
+ @Override
+ public boolean contains(ICdmEntitySessionEnabled sessionOwner) {
+ return ownerSessionMap.containsKey(sessionOwner);
+ }
+
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySessionManager#load(T)
+ */
+ @Override
+ public <T extends Object> T load(T obj, boolean update) {
+ if(activeSession == null) {
+ return obj;
+ } else {
+ return activeSession.load(obj, update);
+ }
+ }
+
+
+ @Override
+ public <T extends CdmBase> void update() {
+ if(activeSession != null) {
+ activeSession.update();
+ }
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySessionManager#load(T)
+ */
+ @Override
+ public <T extends CdmBase> T load(T cdmBase, boolean update) {
+ if(activeSession == null) {
+ return cdmBase;
+ }
+ return activeSession.load(cdmBase, update);
+ }
+
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySessionManager#load(eu.etaxonomy.cdm.api.service.UpdateResult, boolean)
+ */
+ @Override
+ public UpdateResult load(UpdateResult updateResult, boolean update) {
+ if(activeSession == null) {
+ return updateResult;
+ }
+ return activeSession.load(updateResult, update);
+ }
+
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySessionManager#load(java.util.Collection)
+ */
+ @Override
+ public <T extends CdmBase> Collection<T> load(Collection<T> cdmBaseList, boolean update) {
+ if(activeSession == null) {
+ return cdmBaseList;
+ }
+ return activeSession.load(cdmBaseList, update);
+ }
+
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySessionManager#dispose(eu.etaxonomy.taxeditor.session.ISessionEventListener)
+ */
+ void remove(ICdmEntitySessionEnabled owner) {
+ ICdmEntitySession session = ownerSessionMap.get(owner);
+ if(session == null) {
+ logger.info("No Session connected to owner, nothing to do");
+ return;
+ }
+ if(session == activeSession) {
+ setActiveSession(null);
+ }
+ ownerSessionMap.remove(owner);
+
+ }
+
+ @Override
+ public void dispose(ICdmEntitySessionEnabled owner) {
+ ICdmEntitySession session = ownerSessionMap.get(owner);
+ if(session != null) {
+ session.dispose();
+ }
+ notifyObservers();
+ }
+
+ @Override
+ public void disposeAll() {
+ Set<ICdmEntitySessionEnabled> owners =
+ new HashSet<ICdmEntitySessionEnabled>(ownerSessionMap.keySet());
+ for(ICdmEntitySessionEnabled owner : owners) {
+ ICdmEntitySession session = ownerSessionMap.get(owner);
+ if(session != null) {
+ session.dispose();
+ }
+ }
+ notifyObservers();
+ }
+
+ void addToOwnerSessionMap(ICdmEntitySessionEnabled owner, ICdmEntitySession session) {
+ ownerSessionMap.put(owner, session);
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySessionManager#addSessionListener()
+ */
+ @Override
+ public void addSessionObserver(ICdmEntitySessionManagerObserver sessionObserver) {
+ sessionObservers.add(sessionObserver);
+ }
+
+ public void notifyObservers() {
+ for(ICdmEntitySessionManagerObserver sessionObserver : sessionObservers) {
+ sessionObserver.changed();
+ }
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySessionManager#isRemoting()
+ */
+ @Override
+ public boolean isRemoting() {
+ // FIXME:Remoting stupid method to check whether we are in remoting
+ return true;
+ }
+
+
+
+}
+
--- /dev/null
+package eu.etaxonomy.taxeditor.session;
+
+import java.util.Collection;
+import java.util.List;
+import java.util.UUID;
+
+import net.sf.ehcache.statistics.LiveCacheStatistics;
+import eu.etaxonomy.cdm.api.service.IService;
+import eu.etaxonomy.cdm.api.service.UpdateResult;
+import eu.etaxonomy.cdm.model.common.CdmBase;
+import eu.etaxonomy.taxeditor.remoting.cache.EntityCacherDebugResult;
+
+public interface ICdmEntitySession {
+
+ public ICdmEntitySessionEnabled getOwner();
+
+ public LiveCacheStatistics getCacheStatistics();
+
+ public <O extends Object> O load(O obj, boolean update);
+
+ public <T extends CdmBase> T load(T cdmBase, boolean update);
+
+ public UpdateResult load(UpdateResult updateResult, boolean update);
+
+ public <T extends CdmBase> EntityCacherDebugResult debug(T cdmBase);
+
+ public <T extends CdmBase> EntityCacherDebugResult debug(Collection<T> cdmBase);
+
+ public <T extends CdmBase> EntityCacherDebugResult debug();
+
+ public <T extends CdmBase> Collection<T> load(Collection<T> cdmBaseList, boolean update);
+
+ public void setEntitiesAsLatest();
+
+ public <T extends CdmBase> Collection<T> getRootEntities();
+
+ public void dispose();
+
+ public void bind();
+
+// public void addEvent(ICdmBase cdmBase, Set<CdmBase> affectedObjects, EventType eventType);
+
+ public <T extends CdmBase> T remoteLoad(IService<T> service, UUID uuid);
+
+ public <T extends CdmBase> T remoteLoad(IService<T> service, UUID uuid, List<String> propertyPaths);
+
+ public <T extends CdmBase> UUID remoteSave(IService<T> service, T cdmBase);
+
+ public <T extends CdmBase> T remoteUpdate(IService<T> service, T cdmBase);
+
+
+// /**
+// * @param cdmBase
+// * @param affectedObjects
+// */
+// public <T extends ICdmBase> void update(T cdmBase, Set<CdmBase> affectedObjects);
+//
+// /**
+// * @param cdmBase
+// * @param affectedObjects
+// */
+// public <T extends ICdmBase> void delete(T cdmBase, Set<CdmBase> affectedObjects);
+//
+// /**
+// * @param cdmBase
+// * @param affectedObjects
+// */
+// public <T extends ICdmBase> void delete(Set<T> cdmBases, Set<CdmBase> affectedObjects);
+
+
+ public boolean isActive();
+
+// /**
+// * @param cdmBase
+// * @param affectedObject
+// */
+// public <T extends ICdmBase> void update(T cdmBase, CdmBase affectedObject);
+
+ /**
+ *
+ */
+ public <T extends CdmBase> void update();
+
+
+ /**
+ * @param obj
+ * @return
+ */
+ public List<String> getPropertyPaths(Object obj);
+
+}
\ No newline at end of file
--- /dev/null
+package eu.etaxonomy.taxeditor.session;
+
+import java.util.Collection;
+import java.util.List;
+import java.util.Map;
+
+import eu.etaxonomy.cdm.model.common.CdmBase;
+
+public interface ICdmEntitySessionEnabled {
+
+ public ICdmEntitySession getCdmEntitySession();
+
+ public <T extends CdmBase> Collection<T> getRootEntities();
+
+ public Map<Object, List<String>> getPropertyPathsMap();
+
+}
--- /dev/null
+package eu.etaxonomy.taxeditor.session;
+
+import java.util.Collection;
+
+import eu.etaxonomy.cdm.api.service.UpdateResult;
+import eu.etaxonomy.cdm.model.common.CdmBase;
+
+public interface ICdmEntitySessionManager {
+
+ public abstract ICdmEntitySession newSession(ICdmEntitySessionEnabled sessionOwner, boolean setAsActive);
+
+ /**
+ * @param sessionOwner
+ * @return
+ */
+ public ICdmEntitySession bindNullSession(ICdmEntitySessionEnabled sessionOwner);
+
+
+ public abstract void bind(ICdmEntitySessionEnabled sessionOwner);
+
+
+ public abstract <T extends Object> T load(T obj, boolean update);
+
+
+ public abstract <T extends CdmBase> T load(T cdmBase, boolean update);
+
+
+ public abstract UpdateResult load(UpdateResult updateResult, boolean update);
+
+
+ public abstract <T extends CdmBase> Collection<T> load(Collection<T> cdmBaseList, boolean update);
+
+
+ /**
+ * @return
+ */
+ public ICdmEntitySession getActiveSession();
+
+ public Collection<ICdmEntitySession> getSessions();
+
+ public void addSessionObserver(ICdmEntitySessionManagerObserver sessionObserver);
+
+
+
+
+ public boolean isRemoting();
+
+ /**
+ * @param owner
+ */
+ public void dispose(ICdmEntitySessionEnabled owner);
+
+ /**
+ *
+ */
+ public void disposeAll();
+
+
+ /**
+ *
+ */
+ public <T extends CdmBase> void update();
+
+ /**
+ * @param sessionOwner
+ * @return
+ */
+ public boolean contains(ICdmEntitySessionEnabled sessionOwner);
+
+ /**
+ * @return
+ */
+ public ICdmEntitySession getNullSession();
+
+}
\ No newline at end of file
--- /dev/null
+// $Id$
+/**
+* Copyright (C) 2015 EDIT
+* European Distributed Institute of Taxonomy
+* http://www.e-taxonomy.eu
+*
+* The contents of this file are subject to the Mozilla Public License Version 1.1
+* See LICENSE.TXT at the top of this package for the full license terms.
+*/
+package eu.etaxonomy.taxeditor.session;
+
+/**
+ * @author cmathew
+ * @date 16 Feb 2015
+ *
+ */
+public interface ICdmEntitySessionManagerObserver {
+
+ public void changed();
+
+}
--- /dev/null
+// $Id$
+/**
+* Copyright (C) 2015 EDIT
+* European Distributed Institute of Taxonomy
+* http://www.e-taxonomy.eu
+*
+* The contents of this file are subject to the Mozilla Public License Version 1.1
+* See LICENSE.TXT at the top of this package for the full license terms.
+*/
+package eu.etaxonomy.taxeditor.session;
+
+import java.util.Collection;
+import java.util.List;
+import java.util.Map;
+import java.util.UUID;
+
+import net.sf.ehcache.statistics.LiveCacheStatistics;
+import eu.etaxonomy.cdm.api.service.IService;
+import eu.etaxonomy.cdm.api.service.UpdateResult;
+import eu.etaxonomy.cdm.model.common.CdmBase;
+import eu.etaxonomy.taxeditor.remoting.cache.EntityCacherDebugResult;
+
+/**
+ * @author cmathew
+ * @date 30 Jul 2015
+ *
+ */
+public class NullSession implements ICdmEntitySession {
+
+ private ICdmEntitySessionEnabled sessionOwner;
+ private final CdmEntitySessionManager cdmEntitySessionManager;
+
+ public NullSession(ICdmEntitySessionEnabled sessionOwner, CdmEntitySessionManager cdmEntitySessionManager) {
+ this.sessionOwner = sessionOwner;
+ this.cdmEntitySessionManager = cdmEntitySessionManager;
+ }
+
+ public void setOwner(ICdmEntitySessionEnabled sessionOwner) {
+ this.sessionOwner = sessionOwner;
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySession#getOwner()
+ */
+ @Override
+ public ICdmEntitySessionEnabled getOwner() {
+ return sessionOwner;
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySession#getCacheStatistics()
+ */
+ @Override
+ public LiveCacheStatistics getCacheStatistics() {
+ // TODO Auto-generated method stub
+ return null;
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySession#load(java.lang.Object, boolean)
+ */
+ @Override
+ public <O> O load(O obj, boolean update) {
+ return obj;
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySession#load(eu.etaxonomy.cdm.model.common.CdmBase, boolean)
+ */
+ @Override
+ public <T extends CdmBase> T load(T cdmBase, boolean update) {
+ return cdmBase;
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySession#load(eu.etaxonomy.cdm.api.service.UpdateResult, boolean)
+ */
+ @Override
+ public UpdateResult load(UpdateResult updateResult, boolean update) {
+ return updateResult;
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySession#debug(eu.etaxonomy.cdm.model.common.CdmBase)
+ */
+ @Override
+ public <T extends CdmBase> EntityCacherDebugResult debug(T cdmBase) {
+ return null;
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySession#debug(java.util.Collection)
+ */
+ @Override
+ public <T extends CdmBase> EntityCacherDebugResult debug(Collection<T> cdmBase) {
+ return null;
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySession#debug()
+ */
+ @Override
+ public <T extends CdmBase> EntityCacherDebugResult debug() {
+ return null;
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySession#load(java.util.Collection, boolean)
+ */
+ @Override
+ public <T extends CdmBase> Collection<T> load(Collection<T> cdmBaseList, boolean update) {
+ return cdmBaseList;
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySession#setEntitiesAsLatest()
+ */
+ @Override
+ public void setEntitiesAsLatest() {
+
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySession#getRootEntities()
+ */
+ @Override
+ public <T extends CdmBase> Collection<T> getRootEntities() {
+ return null;
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySession#dispose()
+ */
+ @Override
+ public void dispose() {
+ cdmEntitySessionManager.remove(sessionOwner);
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySession#bind()
+ */
+ @Override
+ public void bind() {
+ cdmEntitySessionManager.bindNullSession(sessionOwner);
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySession#remoteLoad(eu.etaxonomy.cdm.api.service.IService, java.util.UUID)
+ */
+ @Override
+ public <T extends CdmBase> T remoteLoad(IService<T> service, UUID uuid) {
+ T cdmBase = service.load(uuid);
+ return load(cdmBase, false);
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySession#remoteLoad(eu.etaxonomy.cdm.api.service.IService, java.util.UUID, java.util.List)
+ */
+ @Override
+ public <T extends CdmBase> T remoteLoad(IService<T> service, UUID uuid, List<String> propertyPaths) {
+ T cdmBase = service.load(uuid, propertyPaths);
+ return load(cdmBase, false);
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySession#remoteSave(eu.etaxonomy.cdm.api.service.IService, eu.etaxonomy.cdm.model.common.CdmBase)
+ */
+ @Override
+ public <T extends CdmBase> UUID remoteSave(IService<T> service, T cdmBase) {
+ UUID uuid = service.save(cdmBase).getUuid();
+ load(cdmBase,false);
+ return uuid;
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySession#remoteUpdate(eu.etaxonomy.cdm.api.service.IService, eu.etaxonomy.cdm.model.common.CdmBase)
+ */
+ @Override
+ public <T extends CdmBase> T remoteUpdate(IService<T> service, T cdmBase) {
+ T mergedCdmBase = service.merge(cdmBase);
+ return mergedCdmBase;
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySession#isActive()
+ */
+ @Override
+ public boolean isActive() {
+ return cdmEntitySessionManager.getActiveSession() == this;
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySession#update()
+ */
+ @Override
+ public <T extends CdmBase> void update() {
+
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySession#getPropertyPaths(java.lang.Object)
+ */
+ @Override
+ public List<String> getPropertyPaths(Object obj) {
+ Map<Object, List<String>> propertyPathsMap = sessionOwner.getPropertyPathsMap();
+ if(propertyPathsMap == null || propertyPathsMap.isEmpty()) {
+ return null;
+ }
+ return propertyPathsMap.get(obj);
+ }
+
+}
--- /dev/null
+// $Id$
+/**
+* Copyright (C) 2015 EDIT
+* European Distributed Institute of Taxonomy
+* http://www.e-taxonomy.eu
+*
+* The contents of this file are subject to the Mozilla Public License Version 1.1
+* See LICENSE.TXT at the top of this package for the full license terms.
+*/
+package eu.etaxonomy.taxeditor.session.mock;
+
+import java.util.Collection;
+import java.util.List;
+import java.util.UUID;
+
+import net.sf.ehcache.statistics.LiveCacheStatistics;
+import eu.etaxonomy.cdm.api.service.IService;
+import eu.etaxonomy.cdm.api.service.UpdateResult;
+import eu.etaxonomy.cdm.model.common.CdmBase;
+import eu.etaxonomy.taxeditor.remoting.cache.EntityCacherDebugResult;
+import eu.etaxonomy.taxeditor.session.ICdmEntitySession;
+import eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled;
+
+/**
+ * @author cmathew
+ * @date 29 Jan 2015
+ *
+ */
+public class MockCdmEntitySession implements ICdmEntitySession {
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySession#load(java.lang.Object)
+ */
+ @Override
+ public <O extends Object> O load(O obj, boolean update) {
+ return obj;
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySession#load(eu.etaxonomy.cdm.model.common.CdmBase)
+ */
+ @Override
+ public <T extends CdmBase> T load(T cdmBase, boolean update) {
+ return cdmBase;
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySession#load(java.util.Collection)
+ */
+ @Override
+ public <T extends CdmBase> Collection<T> load(Collection<T> cdmBaseList, boolean update) {
+ return cdmBaseList;
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySession#setEntitiesAsLatest()
+ */
+ @Override
+ public void setEntitiesAsLatest() {
+
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySession#dispose()
+ */
+ @Override
+ public void dispose() {
+
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySession#bind()
+ */
+ @Override
+ public void bind() {
+ // TODO Auto-generated method stub
+
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySession#debug(eu.etaxonomy.cdm.model.common.CdmBase)
+ */
+ @Override
+ public <T extends CdmBase> EntityCacherDebugResult debug(T cdmBase) {
+
+ return new EntityCacherDebugResult();
+ }
+
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySession#load(java.util.UUID, eu.etaxonomy.cdm.api.service.IService)
+ */
+ @Override
+ public <T extends CdmBase> T remoteLoad(IService<T> service, UUID uuid) {
+ return service.load(uuid);
+ }
+
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySession#load(eu.etaxonomy.cdm.api.service.IService, java.util.UUID, java.util.List)
+ */
+ @Override
+ public <T extends CdmBase> T remoteLoad(IService<T> service, UUID uuid, List<String> propertyPaths) {
+ return service.load(uuid, propertyPaths);
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySession#save(eu.etaxonomy.cdm.api.service.IService, eu.etaxonomy.cdm.model.common.CdmBase)
+ */
+ @Override
+ public <T extends CdmBase> UUID remoteSave(IService<T> service, T cdmBase) {
+ return service.save(cdmBase).getUuid();
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySession#update(eu.etaxonomy.cdm.api.service.IService, eu.etaxonomy.cdm.model.common.CdmBase)
+ */
+ @Override
+ public <T extends CdmBase> T remoteUpdate(IService<T> service, T cdmBase) {
+ return cdmBase;
+ }
+
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySession#getOwner()
+ */
+ @Override
+ public ICdmEntitySessionEnabled getOwner() {
+ return null;
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySession#getCacheStatistics()
+ */
+ @Override
+ public LiveCacheStatistics getCacheStatistics() {
+ return null;
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySession#isActive()
+ */
+ @Override
+ public boolean isActive() {
+ return false;
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySession#getRootEntities()
+ */
+ @Override
+ public <T extends CdmBase> List<T> getRootEntities() {
+ return null;
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySession#debug(java.util.List)
+ */
+ @Override
+ public <T extends CdmBase> EntityCacherDebugResult debug(Collection<T> cdmBase) {
+
+ return null;
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySession#debug()
+ */
+ @Override
+ public <T extends CdmBase> EntityCacherDebugResult debug() {
+
+ return null;
+ }
+
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySession#update()
+ */
+ @Override
+ public <T extends CdmBase> void update() {
+ // TODO Auto-generated method stub
+
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySession#load(eu.etaxonomy.cdm.api.service.UpdateResult, boolean)
+ */
+ @Override
+ public UpdateResult load(UpdateResult updateResult, boolean update) {
+ return updateResult;
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySession#getPropertyPath(java.lang.Class)
+ */
+ @Override
+ public List<String> getPropertyPaths(Object obj) {
+ // TODO Auto-generated method stub
+ return null;
+ }
+
+
+}
--- /dev/null
+package eu.etaxonomy.taxeditor.session.mock;
+
+import java.util.Collection;
+
+import eu.etaxonomy.cdm.api.service.UpdateResult;
+import eu.etaxonomy.cdm.model.common.CdmBase;
+import eu.etaxonomy.taxeditor.session.ICdmEntitySession;
+import eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled;
+import eu.etaxonomy.taxeditor.session.ICdmEntitySessionManager;
+import eu.etaxonomy.taxeditor.session.ICdmEntitySessionManagerObserver;
+
+
+public class MockCdmEntitySessionManager implements ICdmEntitySessionManager {
+
+
+ @Override
+ public void bind(ICdmEntitySessionEnabled sessionOwner) {
+ }
+
+ @Override
+ public <T> T load(T obj, boolean update) {
+ return obj;
+ }
+
+ @Override
+ public <T extends CdmBase> T load(T obj, boolean update) {
+ return obj;
+ }
+
+
+ @Override
+ public <T extends CdmBase> Collection<T> load(Collection<T> cdmBaseList, boolean update) {
+ return cdmBaseList;
+ }
+
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySessionManager#newSession(eu.etaxonomy.taxeditor.session.ISessionEventListener, boolean)
+ */
+ @Override
+ public ICdmEntitySession newSession(ICdmEntitySessionEnabled sessionOwner, boolean setAsActive) {
+ return new MockCdmEntitySession();
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySessionManager#getActiveSession()
+ */
+ @Override
+ public ICdmEntitySession getActiveSession() {
+ return new MockCdmEntitySession();
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySessionManager#getSessions()
+ */
+ @Override
+ public Collection<ICdmEntitySession> getSessions() {
+ return null;
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySessionManager#addSessionObserver(eu.etaxonomy.taxeditor.session.ICdmEntitySessionManagerObserver)
+ */
+ @Override
+ public void addSessionObserver(ICdmEntitySessionManagerObserver sessionObserver) {
+
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySessionManager#isRemoting()
+ */
+ @Override
+ public boolean isRemoting() {
+ return false;
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySessionManager#dispose(eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled)
+ */
+ @Override
+ public void dispose(ICdmEntitySessionEnabled owner) {
+
+
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySessionManager#disposeAll()
+ */
+ @Override
+ public void disposeAll() {
+
+
+ }
+
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySessionManager#update()
+ */
+ @Override
+ public <T extends CdmBase> void update() {
+ // TODO Auto-generated method stub
+
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySessionManager#load(eu.etaxonomy.cdm.api.service.UpdateResult, boolean)
+ */
+ @Override
+ public UpdateResult load(UpdateResult updateResult, boolean update) {
+ return updateResult;
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySessionManager#contains(eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled)
+ */
+ @Override
+ public boolean contains(ICdmEntitySessionEnabled sessionOwner) {
+ return false;
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySessionManager#bindNullSession(eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled)
+ */
+ @Override
+ public ICdmEntitySession bindNullSession(ICdmEntitySessionEnabled sessionOwner) {
+ return new MockCdmEntitySession();
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySessionManager#getNullSession()
+ */
+ @Override
+ public ICdmEntitySession getNullSession() {
+ return new MockCdmEntitySession();
+ }
+
+
+
+}
package org.hibernate.collection.internal;
import java.io.Serializable;
+import java.lang.reflect.Field;
import java.util.ArrayList;
import java.util.Collection;
import java.util.Collections;
-import java.util.HashMap;
import java.util.HashSet;
import java.util.Iterator;
import java.util.List;
import java.util.ListIterator;
-import java.util.Map;
-import java.util.Set;
-import java.util.TreeMap;
-import java.util.TreeSet;
import javax.naming.NamingException;
import org.hibernate.type.Type;
import org.jboss.logging.Logger;
-import eu.etaxonomy.cdm.api.application.CdmApplicationRemoteController;
-import eu.etaxonomy.cdm.api.application.ICdmApplicationConfiguration;
-import eu.etaxonomy.cdm.api.service.ICommonService;
-import eu.etaxonomy.cdm.model.common.PersistentMultiLanguageText;
+import eu.etaxonomy.cdm.api.application.CdmApplicationRemoteConfiguration;
+import eu.etaxonomy.cdm.model.common.CdmBase;
+import eu.etaxonomy.taxeditor.remoting.CdmEagerLoadingException;
+import eu.etaxonomy.taxeditor.remoting.cache.ProxyUtils;
+import eu.etaxonomy.taxeditor.service.ICachedCommonService;
/**
* Base class implementing {@link org.hibernate.collection.spi.PersistentCollection}
* @throws LazyInitializationException if we cannot initialize
*/
protected final void initialize(final boolean writing) {
- // In remoting we are sure that session is null
- // both when using property paths and switching off conversations
- if(session == null && remoting) {
- remoteInitialize();
- }
-
- if ( initialized ) {
- return;
- }
-
-
- withTemporarySessionIfNeeded(
- new LazyInitializationWork<Object>() {
- @Override
- public Object doWork() {
- session.initializeCollection( AbstractPersistentCollection.this, writing );
- return null;
- }
- }
- );
+ if ( initialized ) {
+ return;
+ }
+
+ // In remoting we are sure that session is null
+ // both when using property paths and switching off conversations
+ if(session == null && remoting) {
+ remoteInitialize();
+ } else {
+ withTemporarySessionIfNeeded(
+ new LazyInitializationWork<Object>() {
+ @Override
+ public Object doWork() {
+ session.initializeCollection( AbstractPersistentCollection.this, writing );
+ return null;
+ }
+ }
+ );
+ }
}
private void throwLazyInitializationExceptionIfNotConnected() {
// readElementExistence(final Object element)
// readElementByIndex(final Object index)
- private static ICdmApplicationConfiguration configuration;
+ private static CdmApplicationRemoteConfiguration configuration;
private static boolean remoting = false;
- public static void setConfiguration(ICdmApplicationConfiguration conf) {
+ public static void setConfiguration(CdmApplicationRemoteConfiguration conf) {
+ remoting = true;
configuration = conf;
-
- if(conf instanceof CdmApplicationRemoteController) {
- remoting = true;
- } else {
- remoting = false;
- }
}
try {
String role = getRole();
String fieldName = role.substring(role.lastIndexOf(".") + 1);
- log.info("--> Remote Lazy Initializing " + getRole() + " , key : " + getKey() + " , field : " + fieldName);
+ log.info("--> Remote Lazy Initializing Collection " + getRole() + " , owner : " + getOwner().getClass() + "/" + getKey() + " , field : " + fieldName);
Object owner = getOwner();
-
+ CdmBase cdmBase;
+ if(owner instanceof CdmBase) {
+ cdmBase = (CdmBase)owner;
+ } else {
+ throw new HibernateException("Owner of persistent collection is not a cdm entity");
+ }
if(configuration == null) {
throw new HibernateException("CdmApplicationRemoteConfiguration not initialized (null)");
}
- ICommonService commonService = configuration.getCommonService();
- if(commonService == null) {
+ ICachedCommonService cachedCommonService = configuration.getCachedCommonService();
+ if(cachedCommonService == null) {
throw new HibernateException("commonService not initialized (null)");
}
-// PersistentCollection col = commonService.initializeCollection(this);
-// afterInitialize();
-//
-// Class<?> clazz = getClass();
-// if (clazz != null) {
-// CollectionField cf = getCollectionField(col);
-// Field field = clazz.getDeclaredField(cf.getFieldName());
-// field.setAccessible(true);
-// field.set(this, cf.getCollection());
-// }
- } catch (Exception ex) {
- log.warn(ex.getMessage());
- }
- log.warn("This code is invalid");
- }
- }
-
-
- private CollectionField getCollectionField(PersistentCollection pc) {
- if(pc != null) {
- if(pc instanceof PersistentSet) {
- return new CollectionField(new HashSet((Set)pc), "set");
- }
- if(pc instanceof PersistentSortedSet) {
- return new CollectionField(new TreeSet((Set)pc), "set");
- }
- if(pc instanceof PersistentList) {
- return new CollectionField(new ArrayList((List)pc), "list");
- }
- if(pc instanceof PersistentMap || pc instanceof PersistentMultiLanguageText) {
- return new CollectionField(new HashMap((Map)pc), "map");
- }
- if(pc instanceof PersistentSortedMap) {
- return new CollectionField(new TreeMap((Map)pc), "map");
- }
- }
- return null;
- }
+ //Object obj = ProxyUtils.deproxy(cachedCommonService.initializeCollection(this));
+ Object obj = ProxyUtils.deproxy(cachedCommonService.initializeCollection(cdmBase.getUuid(), fieldName));
+ if(ProxyUtils.isProxy(obj)) {
+ throw new HibernateException("Persistent Collection initialized but is still a proxy");
+ }
+ afterInitialize();
+
+ Class<?> clazz = getClass();
+ if (clazz != null) {
+ //CollectionField cf = cachedCommonService.getCollectionField(col);
+ //cachedCommonService.updatePersistentCollection(cf);
+ Object collectionType = ProxyUtils.getCollectionType(obj);
+ Field field = clazz.getDeclaredField(collectionType.toString());
+ field.setAccessible(true);
+ field.set(this, obj);
+ ProxyUtils.setRoleValueInOwner(owner, role, obj);
- private String getCollectionFieldName(PersistentCollection pc) {
- if(pc != null) {
- if(pc instanceof PersistentSet || pc instanceof PersistentSortedSet) {
- return "set";
- }
- if(pc instanceof PersistentList) {
- return "list";
- }
- if(pc instanceof PersistentMap || pc instanceof PersistentMultiLanguageText) {
- return "map";
+ }
+ } catch (Exception ex) {
+ throw new CdmEagerLoadingException(ex);
}
}
- return null;
- }
-
- private class CollectionField {
- private final Object col;
- private final String fieldName;
- public CollectionField(Object col, String fieldName) {
- this.col = col;
- this.fieldName = fieldName;
- }
-
- public Object getCollection() {
- return this.col;
- }
-
- public String getFieldName() {
- return this.fieldName;
- }
- }
-
- public static boolean isInitialized(List list) {
- return ((AbstractPersistentCollection)list).initialized;
}
- public static boolean isInitialized(Map map) {
- return ((AbstractPersistentCollection)map).initialized;
- }
-
- public static boolean isInitialized(Set set) {
- return ((AbstractPersistentCollection)set).initialized;
- }
}
package org.hibernate.proxy;
import java.io.Serializable;
-import java.util.Set;
import javax.naming.NamingException;
import org.hibernate.Session;
import org.hibernate.SessionException;
import org.hibernate.TransientObjectException;
-import org.hibernate.collection.internal.AbstractPersistentCollection;
import org.hibernate.engine.spi.EntityKey;
import org.hibernate.engine.spi.SessionFactoryImplementor;
import org.hibernate.engine.spi.SessionImplementor;
import org.hibernate.internal.SessionFactoryRegistry;
import org.hibernate.persister.entity.EntityPersister;
import org.jboss.logging.Logger;
-import org.springframework.beans.factory.annotation.Autowire;
-import org.springframework.beans.factory.annotation.Configurable;
-import org.springframework.stereotype.Component;
-import eu.etaxonomy.cdm.api.application.CdmApplicationRemoteController;
-import eu.etaxonomy.cdm.api.application.ICdmApplicationConfiguration;
-import eu.etaxonomy.cdm.api.service.ICommonService;
+import eu.etaxonomy.cdm.api.application.CdmApplicationRemoteConfiguration;
import eu.etaxonomy.cdm.model.common.CdmBase;
+import eu.etaxonomy.taxeditor.remoting.cache.ProxyUtils;
+import eu.etaxonomy.taxeditor.service.ICachedCommonService;
/**
* Convenience base class for lazy initialization handlers. Centralizes the basic plumbing of doing lazy
*
* @author Gavin King
*/
-@Component
-@Configurable(dependencyCheck = true,autowire = Autowire.BY_TYPE)
public abstract class AbstractLazyInitializer implements LazyInitializer {
private static final Logger log = Logger.getLogger( AbstractLazyInitializer.class );
SessionFactoryImplementor sf = (SessionFactoryImplementor)
SessionFactoryRegistry.INSTANCE.getSessionFactory( sessionFactoryUuid );
SessionImplementor session = (SessionImplementor) sf.openSession();
-
+
// TODO: On the next major release, add an
// 'isJTA' or 'getTransactionFactory' method to Session.
boolean isJTA = session.getTransactionCoordinator()
.getTransactionContext().getTransactionEnvironment()
.getTransactionFactory()
.compatibleWithJtaSynchronization();
-
+
if ( !isJTA ) {
// Explicitly handle the transactions only if we're not in
// a JTA environment. A lazy loading temporary session can
public void setUnwrap(boolean unwrap) {
this.unwrap = unwrap;
}
-
+
/** Below is section of code which makes remote service calls */
-
- private static ICdmApplicationConfiguration configuration;
+
+ private static CdmApplicationRemoteConfiguration configuration;
private static boolean remoting = false;
-
- public static void setConfiguration(ICdmApplicationConfiguration conf) {
- configuration = conf;
-
- if(conf instanceof CdmApplicationRemoteController) {
- remoting = true;
- } else {
- remoting = false;
- }
+
+ public static void setConfiguration(CdmApplicationRemoteConfiguration conf) {
+ remoting = true;
+ configuration = conf;
}
-
-
- private void remoteInitialize() {
-
- if(!initialized) {
+
+
+ private void remoteInitialize() {
+
+ if(!initialized) {
int classid = ((Integer)getIdentifier()).intValue();
- log.debug("--> Remote Lazy Initializing" + getEntityName() + " with id " + classid);
+ log.info("--> Remote Lazy Initializing Object " + getEntityName() + " with id " + classid);
Class clazz;
try {
- clazz = (Class<? extends CdmBase>) Class.forName(getEntityName());
+ clazz = Class.forName(getEntityName());
} catch (ClassNotFoundException e) {
throw new HibernateException("Class for " + getEntityName() + " not found", e);
}
if(configuration == null) {
throw new HibernateException("CdmApplicationRemoteConfiguration not initialized (null)");
}
- ICommonService commonService = configuration.getCommonService();
- if(commonService == null) {
+ ICachedCommonService cachedCommonService = configuration.getCachedCommonService();
+ if(cachedCommonService == null) {
throw new HibernateException("commonService not initialized (null)");
}
-
- CdmBase cdmBase = CdmBase.deproxy(commonService.find(clazz,classid),clazz);
+
+ CdmBase cdmBase = cachedCommonService.find(clazz,classid);
+ if(ProxyUtils.isProxy(cdmBase)) {
+ throw new HibernateException("CdmBase Object initialized but is still a proxy");
+ }
setImplementation(cdmBase);
-
+
}
}
-
+
public static boolean isInitialized(AbstractLazyInitializer obj) {
return obj.initialized;
}
--- /dev/null
+cdmlib-remote-webapp.war
<?xml version="1.0" encoding="UTF-8"?>\r
<beans xmlns="http://www.springframework.org/schema/beans"\r
- xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"\r
- xmlns:context="http://www.springframework.org/schema/context"\r
- xmlns:tx="http://www.springframework.org/schema/tx"\r
- xsi:schemaLocation="http://www.springframework.org/schema/beans http://www.springframework.org/schema/beans/spring-beans-2.5.xsd\r
- http://www.springframework.org/schema/tx http://www.springframework.org/schema/tx/spring-tx-2.5.xsd\r
- http://www.springframework.org/schema/context http://www.springframework.org/schema/context/spring-context-2.5.xsd">\r
-\r
- \r
- <bean id="agentService"\r
- class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
- <property name="serviceUrl">\r
- <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/agent.service</value>\r
- </property>\r
- <property name="serviceInterface">\r
- <value>eu.etaxonomy.cdm.api.service.IAgentService</value>\r
- </property>\r
- <property name="httpInvokerRequestExecutor">\r
- <bean class="org.springframework.security.remoting.httpinvoker.AuthenticationSimpleHttpInvokerRequestExecutor" />\r
- </property>\r
- </bean>\r
-\r
- <bean id="annotationService"\r
- class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
- <property name="serviceUrl">\r
- <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/annotation.service</value>\r
- </property>\r
- <property name="serviceInterface">\r
- <value>eu.etaxonomy.cdm.api.service.IAnnotationService</value>\r
- </property>\r
- <property name="httpInvokerRequestExecutor">\r
- <bean class="org.springframework.security.remoting.httpinvoker.AuthenticationSimpleHttpInvokerRequestExecutor" />\r
- </property>\r
- </bean>\r
-\r
- <bean id="auditeventService"\r
- class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
- <property name="serviceUrl">\r
- <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/auditevent.service</value>\r
- </property>\r
- <property name="serviceInterface">\r
- <value>eu.etaxonomy.cdm.api.service.IAuditEventService</value>\r
- </property>\r
- <property name="httpInvokerRequestExecutor">\r
- <bean class="org.springframework.security.remoting.httpinvoker.AuthenticationSimpleHttpInvokerRequestExecutor" />\r
- </property>\r
- </bean>\r
-\r
- <bean id="classificationService"\r
- class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
- <property name="serviceUrl">\r
- <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/classification.service</value>\r
- </property>\r
- <property name="serviceInterface">\r
- <value>eu.etaxonomy.cdm.api.service.IClassificationService</value>\r
- </property>\r
- <property name="httpInvokerRequestExecutor">\r
- <bean class="org.springframework.security.remoting.httpinvoker.AuthenticationSimpleHttpInvokerRequestExecutor" />\r
- </property>\r
- </bean>\r
-\r
- <bean id="collectionService"\r
- class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
- <property name="serviceUrl">\r
- <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/collection.service</value>\r
- </property>\r
- <property name="serviceInterface">\r
- <value>eu.etaxonomy.cdm.api.service.ICollectionService</value>\r
- </property>\r
- <property name="httpInvokerRequestExecutor">\r
- <bean class="org.springframework.security.remoting.httpinvoker.AuthenticationSimpleHttpInvokerRequestExecutor" />\r
- </property>\r
- </bean>\r
-\r
- <bean id="commonService"\r
- class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
- <property name="serviceUrl">\r
- <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/common.service</value>\r
- </property>\r
- <property name="serviceInterface">\r
- <value>eu.etaxonomy.cdm.api.service.ICommonService</value>\r
- </property>\r
- <property name="httpInvokerRequestExecutor">\r
- <bean class="org.springframework.security.remoting.httpinvoker.AuthenticationSimpleHttpInvokerRequestExecutor" />\r
- </property>\r
- </bean>\r
-\r
- <bean id="descriptionService"\r
- class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
- <property name="serviceUrl">\r
- <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/description.service</value>\r
- </property>\r
- <property name="serviceInterface">\r
- <value>eu.etaxonomy.cdm.api.service.IDescriptionService</value>\r
- </property>\r
- <property name="httpInvokerRequestExecutor">\r
- <bean class="org.springframework.security.remoting.httpinvoker.AuthenticationSimpleHttpInvokerRequestExecutor" />\r
- </property>\r
- </bean>\r
- \r
- <bean id="editGeoService"\r
- class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
- <property name="serviceUrl">\r
- <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/editgeo.service</value>\r
- </property>\r
- <property name="serviceInterface">\r
- <value>eu.etaxonomy.cdm.ext.geo.IEditGeoService</value>\r
- </property>\r
- <property name="httpInvokerRequestExecutor">\r
- <bean class="org.springframework.security.remoting.httpinvoker.AuthenticationSimpleHttpInvokerRequestExecutor" />\r
- </property>\r
- </bean>\r
-\r
- <bean id="featureNodeService"\r
- class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
- <property name="serviceUrl">\r
- <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/featurenode.service</value>\r
- </property>\r
- <property name="serviceInterface">\r
- <value>eu.etaxonomy.cdm.api.service.IFeatureNodeService</value>\r
- </property>\r
- <property name="httpInvokerRequestExecutor">\r
- <bean class="org.springframework.security.remoting.httpinvoker.AuthenticationSimpleHttpInvokerRequestExecutor" />\r
- </property>\r
- </bean>\r
-\r
- <bean id="featureTreeService"\r
- class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
- <property name="serviceUrl">\r
- <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/featuretree.service</value>\r
- </property>\r
- <property name="serviceInterface">\r
- <value>eu.etaxonomy.cdm.api.service.IFeatureTreeService</value>\r
- </property>\r
- <property name="httpInvokerRequestExecutor">\r
- <bean class="org.springframework.security.remoting.httpinvoker.AuthenticationSimpleHttpInvokerRequestExecutor" />\r
- </property>\r
- </bean>\r
-\r
- <bean id="groupService"\r
- class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
- <property name="serviceUrl">\r
- <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/group.service</value>\r
- </property>\r
- <property name="serviceInterface">\r
- <value>eu.etaxonomy.cdm.api.service.IGroupService</value>\r
- </property>\r
- <property name="httpInvokerRequestExecutor">\r
- <bean class="org.springframework.security.remoting.httpinvoker.AuthenticationSimpleHttpInvokerRequestExecutor" />\r
- </property>\r
- </bean>\r
-\r
- <bean id="identificationKeyService"\r
- class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
- <property name="serviceUrl">\r
- <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/identificationkey.service</value>\r
- </property>\r
- <property name="serviceInterface">\r
- <value>eu.etaxonomy.cdm.api.service.IIdentificationKeyService</value>\r
- </property>\r
- <property name="httpInvokerRequestExecutor">\r
- <bean class="org.springframework.security.remoting.httpinvoker.AuthenticationSimpleHttpInvokerRequestExecutor" />\r
- </property>\r
- </bean>\r
-\r
- <bean id="locationService"\r
- class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
- <property name="serviceUrl">\r
- <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/location.service</value>\r
- </property>\r
- <property name="serviceInterface">\r
- <value>eu.etaxonomy.cdm.api.service.ILocationService</value>\r
- </property>\r
- <property name="httpInvokerRequestExecutor">\r
- <bean class="org.springframework.security.remoting.httpinvoker.AuthenticationSimpleHttpInvokerRequestExecutor" />\r
- </property>\r
- </bean>\r
-\r
- <bean id="markerService"\r
- class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
- <property name="serviceUrl">\r
- <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/marker.service</value>\r
- </property>\r
- <property name="serviceInterface">\r
- <value>eu.etaxonomy.cdm.api.service.IMarkerService</value>\r
- </property>\r
- <property name="httpInvokerRequestExecutor">\r
- <bean class="org.springframework.security.remoting.httpinvoker.AuthenticationSimpleHttpInvokerRequestExecutor" />\r
- </property>\r
- </bean>\r
-\r
- <bean id="mediaService"\r
- class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
- <property name="serviceUrl">\r
- <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/media.service</value>\r
- </property>\r
- <property name="serviceInterface">\r
- <value>eu.etaxonomy.cdm.api.service.IMediaService</value>\r
- </property>\r
- <property name="httpInvokerRequestExecutor">\r
- <bean class="org.springframework.security.remoting.httpinvoker.AuthenticationSimpleHttpInvokerRequestExecutor" />\r
- </property>\r
- </bean>\r
-\r
- <bean id="nameService"\r
- class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
- <property name="serviceUrl">\r
- <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/name.service</value>\r
- </property>\r
- <property name="serviceInterface">\r
- <value>eu.etaxonomy.cdm.api.service.INameService</value>\r
- </property>\r
- <property name="httpInvokerRequestExecutor">\r
- <bean class="org.springframework.security.remoting.httpinvoker.AuthenticationSimpleHttpInvokerRequestExecutor" />\r
- </property>\r
- </bean>\r
-\r
- <bean id="occurrenceService"\r
- class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
- <property name="serviceUrl">\r
- <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/occurrence.service</value>\r
- </property>\r
- <property name="serviceInterface">\r
- <value>eu.etaxonomy.cdm.api.service.IOccurrenceService</value>\r
- </property>\r
- <property name="httpInvokerRequestExecutor">\r
- <bean class="org.springframework.security.remoting.httpinvoker.AuthenticationSimpleHttpInvokerRequestExecutor" />\r
- </property>\r
- </bean>\r
-\r
- <bean id="polytomousKeyNodeService"\r
- class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
- <property name="serviceUrl">\r
- <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/polytomouskeynode.service</value>\r
- </property>\r
- <property name="serviceInterface">\r
- <value>eu.etaxonomy.cdm.api.service.IPolytomousKeyNodeService</value>\r
- </property>\r
- <property name="httpInvokerRequestExecutor">\r
- <bean class="org.springframework.security.remoting.httpinvoker.AuthenticationSimpleHttpInvokerRequestExecutor" />\r
- </property>\r
- </bean>\r
-\r
- <bean id="polytomousKeyService"\r
- class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
- <property name="serviceUrl">\r
- <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/polytomouskey.service</value>\r
- </property>\r
- <property name="serviceInterface">\r
- <value>eu.etaxonomy.cdm.api.service.IPolytomousKeyService</value>\r
- </property>\r
- <property name="httpInvokerRequestExecutor">\r
- <bean class="org.springframework.security.remoting.httpinvoker.AuthenticationSimpleHttpInvokerRequestExecutor" />\r
- </property>\r
- </bean>\r
-\r
- <bean id="referenceService"\r
- class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
- <property name="serviceUrl">\r
- <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/reference.service</value>\r
- </property>\r
- <property name="serviceInterface">\r
- <value>eu.etaxonomy.cdm.api.service.IReferenceService</value>\r
- </property>\r
- <property name="httpInvokerRequestExecutor">\r
- <bean class="org.springframework.security.remoting.httpinvoker.AuthenticationSimpleHttpInvokerRequestExecutor" />\r
- </property>\r
- </bean>\r
- \r
-<!-- \r
- <bean id="serviceService"\r
- class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
- <property name="serviceUrl">\r
- <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/service.service</value>\r
- </property>\r
- <property name="serviceInterface">\r
- <value>eu.etaxonomy.cdm.api.service.IService</value>\r
- </property>\r
- </bean>\r
- -->\r
- \r
- <bean id="taxonNodeService"\r
- class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
- <property name="serviceUrl">\r
- <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/taxonnode.service</value>\r
- </property>\r
- <property name="serviceInterface">\r
- <value>eu.etaxonomy.cdm.api.service.ITaxonNodeService</value>\r
- </property>\r
- <property name="httpInvokerRequestExecutor">\r
- <bean class="org.springframework.security.remoting.httpinvoker.AuthenticationSimpleHttpInvokerRequestExecutor" />\r
- </property>\r
- </bean>\r
-\r
- <bean id="taxonService"\r
- class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
- <property name="serviceUrl">\r
- <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/taxon.service</value>\r
- </property>\r
- <property name="serviceInterface">\r
- <value>eu.etaxonomy.cdm.api.service.ITaxonService</value>\r
- </property>\r
- <property name="httpInvokerRequestExecutor">\r
- <bean class="org.springframework.security.remoting.httpinvoker.AuthenticationSimpleHttpInvokerRequestExecutor" />\r
- </property>\r
- </bean>\r
-\r
- <bean id="termService"\r
- class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
- <property name="serviceUrl">\r
- <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/term.service</value>\r
- </property>\r
- <property name="serviceInterface">\r
- <value>eu.etaxonomy.cdm.api.service.ITermService</value>\r
- </property>\r
- <property name="httpInvokerRequestExecutor">\r
- <bean class="org.springframework.security.remoting.httpinvoker.AuthenticationSimpleHttpInvokerRequestExecutor" />\r
- </property>\r
- </bean>\r
-\r
- <bean id="userService"\r
- class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
- <property name="serviceUrl">\r
- <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/user.service</value>\r
- </property>\r
- <property name="serviceInterface">\r
- <value>eu.etaxonomy.cdm.api.service.IUserService</value>\r
- </property>\r
- <property name="httpInvokerRequestExecutor">\r
- <bean class="org.springframework.security.remoting.httpinvoker.AuthenticationSimpleHttpInvokerRequestExecutor" />\r
- </property>\r
- </bean>\r
-\r
- <bean id="vocabularyService"\r
- class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
- <property name="serviceUrl">\r
- <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/vocabulary.service</value>\r
- </property>\r
- <property name="serviceInterface">\r
- <value>eu.etaxonomy.cdm.api.service.IVocabularyService</value>\r
- </property>\r
- <property name="httpInvokerRequestExecutor">\r
- <bean class="org.springframework.security.remoting.httpinvoker.AuthenticationSimpleHttpInvokerRequestExecutor" />\r
- </property>\r
- </bean>\r
-\r
- <bean id="workingSetService"\r
- class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
- <property name="serviceUrl">\r
- <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/workingset.service</value>\r
- </property>\r
- <property name="serviceInterface">\r
- <value>eu.etaxonomy.cdm.api.service.IWorkingSetService</value>\r
- </property>\r
- <property name="httpInvokerRequestExecutor">\r
- <bean class="org.springframework.security.remoting.httpinvoker.AuthenticationSimpleHttpInvokerRequestExecutor" />\r
- </property>\r
- </bean>\r
- \r
- <bean id="grantedAuthorityService"\r
- class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
- <property name="serviceUrl">\r
- <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/grantedauthority.service</value>\r
- </property>\r
- <property name="serviceInterface">\r
- <value>eu.etaxonomy.cdm.api.service.IGrantedAuthorityService</value>\r
- </property>\r
- <property name="httpInvokerRequestExecutor">\r
- <bean class="org.springframework.security.remoting.httpinvoker.AuthenticationSimpleHttpInvokerRequestExecutor" />\r
- </property>\r
- </bean>\r
- \r
- <bean id="databaseService"\r
- class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
- <property name="serviceUrl">\r
- <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/database.service</value>\r
- </property>\r
- <property name="serviceInterface">\r
- <value>eu.etaxonomy.cdm.api.service.IDatabaseService</value>\r
- </property>\r
- <property name="httpInvokerRequestExecutor">\r
- <bean class="org.springframework.security.remoting.httpinvoker.AuthenticationSimpleHttpInvokerRequestExecutor" />\r
- </property>\r
- </bean>\r
- \r
- <bean id="lsidAuthorityService"\r
- class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
- <property name="serviceUrl">\r
- <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/lsidauthoruty.service</value>\r
- </property>\r
- <property name="serviceInterface">\r
- <value>eu.etaxonomy.cdm.api.service.lsid.LSIDAuthorityService</value>\r
- </property>\r
- <property name="httpInvokerRequestExecutor">\r
- <bean class="org.springframework.security.remoting.httpinvoker.AuthenticationSimpleHttpInvokerRequestExecutor" />\r
- </property>\r
- </bean>\r
- \r
- <bean id="lsidMetadataService"\r
- class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
- <property name="serviceUrl">\r
- <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/lsidmetadata.service</value>\r
- </property>\r
- <property name="serviceInterface">\r
- <value>eu.etaxonomy.cdm.api.service.lsid.LSIDMetadataService</value>\r
- </property>\r
- <property name="httpInvokerRequestExecutor">\r
- <bean class="org.springframework.security.remoting.httpinvoker.AuthenticationSimpleHttpInvokerRequestExecutor" />\r
- </property>\r
- </bean>\r
- \r
- <bean id="lsiDataService"\r
- class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
- <property name="serviceUrl">\r
- <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/lsiddata.service</value>\r
- </property>\r
- <property name="serviceInterface">\r
- <value>eu.etaxonomy.cdm.api.service.lsid.LSIDDataService</value>\r
- </property>\r
- <property name="httpInvokerRequestExecutor">\r
- <bean class="org.springframework.security.remoting.httpinvoker.AuthenticationSimpleHttpInvokerRequestExecutor" />\r
- </property>\r
- </bean>\r
-\r
- <bean id="providerManager"\r
- class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
- <property name="serviceUrl">\r
- <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/authenticationManager.service</value>\r
- </property>\r
- <property name="serviceInterface">\r
- <value>org.springframework.security.authentication.AuthenticationManager</value>\r
- </property>\r
- <property name="httpInvokerRequestExecutor">\r
- <bean class="org.springframework.security.remoting.httpinvoker.AuthenticationSimpleHttpInvokerRequestExecutor" />\r
- </property>\r
- </bean>\r
- \r
- <bean id="primerService"\r
- class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
- <property name="serviceUrl">\r
- <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/primer.service</value>\r
- </property>\r
- <property name="serviceInterface">\r
- <value>eu.etaxonomy.cdm.api.service.molecular.IPrimerService</value>\r
- </property>\r
- <property name="httpInvokerRequestExecutor">\r
- <bean class="org.springframework.security.remoting.httpinvoker.AuthenticationSimpleHttpInvokerRequestExecutor" />\r
- </property>\r
- </bean>\r
- \r
- <bean id="amplificationService"\r
- class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
- <property name="serviceUrl">\r
- <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/amplification.service</value>\r
- </property>\r
- <property name="serviceInterface">\r
- <value>eu.etaxonomy.cdm.api.service.molecular.IAmplificationService</value>\r
- </property>\r
- <property name="httpInvokerRequestExecutor">\r
- <bean class="org.springframework.security.remoting.httpinvoker.AuthenticationSimpleHttpInvokerRequestExecutor" />\r
- </property>\r
- </bean>\r
- \r
- <bean id="sequenceService"\r
- class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
- <property name="serviceUrl">\r
- <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/sequence.service</value>\r
- </property>\r
- <property name="serviceInterface">\r
- <value>eu.etaxonomy.cdm.api.service.molecular.ISequenceService</value>\r
- </property>\r
- <property name="httpInvokerRequestExecutor">\r
- <bean class="org.springframework.security.remoting.httpinvoker.AuthenticationSimpleHttpInvokerRequestExecutor" />\r
- </property>\r
- </bean>\r
+ xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xmlns:context="http://www.springframework.org/schema/context"\r
+ xmlns:tx="http://www.springframework.org/schema/tx"\r
+ xsi:schemaLocation="http://www.springframework.org/schema/beans http://www.springframework.org/schema/beans/spring-beans-3.1.xsd\r
+ http://www.springframework.org/schema/tx http://www.springframework.org/schema/tx/spring-tx-3.1.xsd\r
+ http://www.springframework.org/schema/context http://www.springframework.org/schema/context/spring-context-3.1.xsd">\r
+\r
+\r
+ <bean id="agentService" lazy-init="true"\r
+ class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
+ <property name="serviceUrl">\r
+ <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/agent.service\r
+ </value>\r
+ </property>\r
+ <property name="serviceInterface">\r
+ <value>eu.etaxonomy.cdm.api.service.IAgentService</value>\r
+ </property>\r
+ <property name="httpInvokerRequestExecutor">\r
+ <bean class="eu.etaxonomy.taxeditor.service.CdmServiceRequestExecutor">\r
+ <property name="readTimeout" value="0" />\r
+ </bean>\r
+ </property>\r
+ </bean>\r
+\r
+ <bean id="annotationService" lazy-init="true"\r
+ class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
+ <property name="serviceUrl">\r
+ <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/annotation.service\r
+ </value>\r
+ </property>\r
+ <property name="serviceInterface">\r
+ <value>eu.etaxonomy.cdm.api.service.IAnnotationService</value>\r
+ </property>\r
+ <property name="httpInvokerRequestExecutor">\r
+ <bean class="eu.etaxonomy.taxeditor.service.CdmServiceRequestExecutor">\r
+ <property name="readTimeout" value="0" />\r
+ </bean>\r
+ </property>\r
+ </bean>\r
+\r
+ <bean id="auditeventService" lazy-init="true"\r
+ class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
+ <property name="serviceUrl">\r
+ <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/auditevent.service\r
+ </value>\r
+ </property>\r
+ <property name="serviceInterface">\r
+ <value>eu.etaxonomy.cdm.api.service.IAuditEventService</value>\r
+ </property>\r
+ <property name="httpInvokerRequestExecutor">\r
+ <bean class="eu.etaxonomy.taxeditor.service.CdmServiceRequestExecutor">\r
+ <property name="readTimeout" value="0" />\r
+ </bean>\r
+ </property>\r
+ </bean>\r
+\r
+ <bean id="classificationService" lazy-init="true"\r
+ class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
+ <property name="serviceUrl">\r
+ <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/classification.service\r
+ </value>\r
+ </property>\r
+ <property name="serviceInterface">\r
+ <value>eu.etaxonomy.cdm.api.service.IClassificationService</value>\r
+ </property>\r
+ <property name="httpInvokerRequestExecutor">\r
+ <bean class="eu.etaxonomy.taxeditor.service.CdmServiceRequestExecutor">\r
+ <property name="readTimeout" value="0" />\r
+ </bean>\r
+ </property>\r
+ </bean>\r
+\r
+ <bean id="collectionService" lazy-init="true"\r
+ class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
+ <property name="serviceUrl">\r
+ <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/collection.service\r
+ </value>\r
+ </property>\r
+ <property name="serviceInterface">\r
+ <value>eu.etaxonomy.cdm.api.service.ICollectionService</value>\r
+ </property>\r
+ <property name="httpInvokerRequestExecutor">\r
+ <bean class="eu.etaxonomy.taxeditor.service.CdmServiceRequestExecutor">\r
+ <property name="readTimeout" value="0" />\r
+ </bean>\r
+ </property>\r
+ </bean>\r
+\r
+ <bean id="commonService" lazy-init="true"\r
+ class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
+ <property name="serviceUrl">\r
+ <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/common.service\r
+ </value>\r
+ </property>\r
+ <property name="serviceInterface">\r
+ <value>eu.etaxonomy.cdm.api.service.ICommonService</value>\r
+ </property>\r
+ <property name="httpInvokerRequestExecutor">\r
+ <bean class="eu.etaxonomy.taxeditor.service.CdmServiceRequestExecutor">\r
+ <property name="readTimeout" value="0" />\r
+ </bean>\r
+ </property>\r
+ </bean>\r
+\r
+ <bean id="descriptionService" lazy-init="true"\r
+ class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
+ <property name="serviceUrl">\r
+ <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/description.service\r
+ </value>\r
+ </property>\r
+ <property name="serviceInterface">\r
+ <value>eu.etaxonomy.cdm.api.service.IDescriptionService</value>\r
+ </property>\r
+ <property name="httpInvokerRequestExecutor">\r
+ <bean class="eu.etaxonomy.taxeditor.service.CdmServiceRequestExecutor">\r
+ <property name="readTimeout" value="0" />\r
+ </bean>\r
+ </property>\r
+ </bean>\r
+\r
+ <bean id="editGeoService" lazy-init="true"\r
+ class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
+ <property name="serviceUrl">\r
+ <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/editgeo.service\r
+ </value>\r
+ </property>\r
+ <property name="serviceInterface">\r
+ <value>eu.etaxonomy.cdm.ext.geo.IEditGeoService</value>\r
+ </property>\r
+ <property name="httpInvokerRequestExecutor">\r
+ <bean class="eu.etaxonomy.taxeditor.service.CdmServiceRequestExecutor">\r
+ <property name="readTimeout" value="0" />\r
+ </bean>\r
+ </property>\r
+ </bean>\r
+\r
+ <bean id="featureNodeService" lazy-init="true"\r
+ class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
+ <property name="serviceUrl">\r
+ <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/featurenode.service\r
+ </value>\r
+ </property>\r
+ <property name="serviceInterface">\r
+ <value>eu.etaxonomy.cdm.api.service.IFeatureNodeService</value>\r
+ </property>\r
+ <property name="httpInvokerRequestExecutor">\r
+ <bean class="eu.etaxonomy.taxeditor.service.CdmServiceRequestExecutor">\r
+ <property name="readTimeout" value="0" />\r
+ </bean>\r
+ </property>\r
+ </bean>\r
+\r
+ <bean id="featureTreeService" lazy-init="true"\r
+ class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
+ <property name="serviceUrl">\r
+ <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/featuretree.service\r
+ </value>\r
+ </property>\r
+ <property name="serviceInterface">\r
+ <value>eu.etaxonomy.cdm.api.service.IFeatureTreeService</value>\r
+ </property>\r
+ <property name="httpInvokerRequestExecutor">\r
+ <bean class="eu.etaxonomy.taxeditor.service.CdmServiceRequestExecutor">\r
+ <property name="readTimeout" value="0" />\r
+ </bean>\r
+ </property>\r
+ </bean>\r
+\r
+ <bean id="groupService" lazy-init="true"\r
+ class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
+ <property name="serviceUrl">\r
+ <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/group.service\r
+ </value>\r
+ </property>\r
+ <property name="serviceInterface">\r
+ <value>eu.etaxonomy.cdm.api.service.IGroupService</value>\r
+ </property>\r
+ <property name="httpInvokerRequestExecutor">\r
+ <bean class="eu.etaxonomy.taxeditor.service.CdmServiceRequestExecutor">\r
+ <property name="readTimeout" value="0" />\r
+ </bean>\r
+ </property>\r
+ </bean>\r
+\r
+ <bean id="identificationKeyService" lazy-init="true"\r
+ class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
+ <property name="serviceUrl">\r
+ <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/identificationkey.service\r
+ </value>\r
+ </property>\r
+ <property name="serviceInterface">\r
+ <value>eu.etaxonomy.cdm.api.service.IIdentificationKeyService\r
+ </value>\r
+ </property>\r
+ <property name="httpInvokerRequestExecutor">\r
+ <bean class="eu.etaxonomy.taxeditor.service.CdmServiceRequestExecutor">\r
+ <property name="readTimeout" value="0" />\r
+ </bean>\r
+ </property>\r
+ </bean>\r
+\r
+ <bean id="locationService" lazy-init="true"\r
+ class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
+ <property name="serviceUrl">\r
+ <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/location.service\r
+ </value>\r
+ </property>\r
+ <property name="serviceInterface">\r
+ <value>eu.etaxonomy.cdm.api.service.ILocationService</value>\r
+ </property>\r
+ <property name="httpInvokerRequestExecutor">\r
+ <bean class="eu.etaxonomy.taxeditor.service.CdmServiceRequestExecutor">\r
+ <property name="readTimeout" value="0" />\r
+ </bean>\r
+ </property>\r
+ </bean>\r
+\r
+ <bean id="markerService" lazy-init="true"\r
+ class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
+ <property name="serviceUrl">\r
+ <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/marker.service\r
+ </value>\r
+ </property>\r
+ <property name="serviceInterface">\r
+ <value>eu.etaxonomy.cdm.api.service.IMarkerService</value>\r
+ </property>\r
+ <property name="httpInvokerRequestExecutor">\r
+ <bean class="eu.etaxonomy.taxeditor.service.CdmServiceRequestExecutor">\r
+ <property name="readTimeout" value="0" />\r
+ </bean>\r
+ </property>\r
+ </bean>\r
+\r
+ <bean id="mediaService" lazy-init="true"\r
+ class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
+ <property name="serviceUrl">\r
+ <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/media.service\r
+ </value>\r
+ </property>\r
+ <property name="serviceInterface">\r
+ <value>eu.etaxonomy.cdm.api.service.IMediaService</value>\r
+ </property>\r
+ <property name="httpInvokerRequestExecutor">\r
+ <bean class="eu.etaxonomy.taxeditor.service.CdmServiceRequestExecutor">\r
+ <property name="readTimeout" value="0" />\r
+ </bean>\r
+ </property>\r
+ </bean>\r
+\r
+ <bean id="nameService" lazy-init="true"\r
+ class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
+ <property name="serviceUrl">\r
+ <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/name.service\r
+ </value>\r
+ </property>\r
+ <property name="serviceInterface">\r
+ <value>eu.etaxonomy.cdm.api.service.INameService</value>\r
+ </property>\r
+ <property name="httpInvokerRequestExecutor">\r
+ <bean class="eu.etaxonomy.taxeditor.service.CdmServiceRequestExecutor">\r
+ <property name="readTimeout" value="0" />\r
+ </bean>\r
+ </property>\r
+ </bean>\r
+\r
+ <bean id="occurrenceService" lazy-init="true"\r
+ class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
+ <property name="serviceUrl">\r
+ <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/occurrence.service\r
+ </value>\r
+ </property>\r
+ <property name="serviceInterface">\r
+ <value>eu.etaxonomy.cdm.api.service.IOccurrenceService</value>\r
+ </property>\r
+ <property name="httpInvokerRequestExecutor">\r
+ <bean class="eu.etaxonomy.taxeditor.service.CdmServiceRequestExecutor">\r
+ <property name="readTimeout" value="0" />\r
+ </bean>\r
+ </property>\r
+ </bean>\r
+\r
+ <bean id="polytomousKeyNodeService" lazy-init="true"\r
+ class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
+ <property name="serviceUrl">\r
+ <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/polytomouskeynode.service\r
+ </value>\r
+ </property>\r
+ <property name="serviceInterface">\r
+ <value>eu.etaxonomy.cdm.api.service.IPolytomousKeyNodeService\r
+ </value>\r
+ </property>\r
+ <property name="httpInvokerRequestExecutor">\r
+ <bean class="eu.etaxonomy.taxeditor.service.CdmServiceRequestExecutor">\r
+ <property name="readTimeout" value="0" />\r
+ </bean>\r
+ </property>\r
+ </bean>\r
+\r
+ <bean id="polytomousKeyService" lazy-init="true"\r
+ class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
+ <property name="serviceUrl">\r
+ <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/polytomouskey.service\r
+ </value>\r
+ </property>\r
+ <property name="serviceInterface">\r
+ <value>eu.etaxonomy.cdm.api.service.IPolytomousKeyService</value>\r
+ </property>\r
+ <property name="httpInvokerRequestExecutor">\r
+ <bean class="eu.etaxonomy.taxeditor.service.CdmServiceRequestExecutor">\r
+ <property name="readTimeout" value="0" />\r
+ </bean>\r
+ </property>\r
+ </bean>\r
+\r
+ <bean id="referenceService" lazy-init="true"\r
+ class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
+ <property name="serviceUrl">\r
+ <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/reference.service\r
+ </value>\r
+ </property>\r
+ <property name="serviceInterface">\r
+ <value>eu.etaxonomy.cdm.api.service.IReferenceService</value>\r
+ </property>\r
+ <property name="httpInvokerRequestExecutor">\r
+ <bean class="eu.etaxonomy.taxeditor.service.CdmServiceRequestExecutor">\r
+ <property name="readTimeout" value="0" />\r
+ </bean>\r
+ </property>\r
+ </bean>\r
+\r
+ <bean id="taxonNodeService" lazy-init="true"\r
+ class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
+ <property name="serviceUrl">\r
+ <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/taxonnode.service\r
+ </value>\r
+ </property>\r
+ <property name="serviceInterface">\r
+ <value>eu.etaxonomy.cdm.api.service.ITaxonNodeService</value>\r
+ </property>\r
+ <property name="httpInvokerRequestExecutor">\r
+ <bean class="eu.etaxonomy.taxeditor.service.CdmServiceRequestExecutor">\r
+ <property name="readTimeout" value="0" />\r
+ </bean>\r
+ </property>\r
+ </bean>\r
+\r
+ <bean id="taxonService" lazy-init="true"\r
+ class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
+ <property name="serviceUrl">\r
+ <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/taxon.service\r
+ </value>\r
+ </property>\r
+ <property name="serviceInterface">\r
+ <value>eu.etaxonomy.cdm.api.service.ITaxonService</value>\r
+ </property>\r
+ <property name="httpInvokerRequestExecutor">\r
+ <bean class="eu.etaxonomy.taxeditor.service.CdmServiceRequestExecutor">\r
+ <property name="readTimeout" value="0" />\r
+ </bean>\r
+ </property>\r
+ </bean>\r
+\r
+ <bean id="termService" lazy-init="true"\r
+ class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
+ <property name="serviceUrl">\r
+ <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/term.service\r
+ </value>\r
+ </property>\r
+ <property name="serviceInterface">\r
+ <value>eu.etaxonomy.cdm.api.service.ITermService</value>\r
+ </property>\r
+ <property name="httpInvokerRequestExecutor">\r
+ <bean class="eu.etaxonomy.taxeditor.service.TermServiceRequestExecutor">\r
+ <property name="readTimeout" value="0" />\r
+ </bean>\r
+ </property>\r
+ </bean>\r
+\r
+ <bean id="userService" lazy-init="true"\r
+ class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
+ <property name="serviceUrl">\r
+ <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting-public/user.service\r
+ </value>\r
+ </property>\r
+ <property name="serviceInterface">\r
+ <value>eu.etaxonomy.cdm.api.service.IUserService</value>\r
+ </property>\r
+ <property name="httpInvokerRequestExecutor">\r
+ <bean\r
+ class="eu.etaxonomy.taxeditor.service.CdmServiceRequestExecutor">\r
+ <property name="readTimeout" value="0" />\r
+ </bean>\r
+ </property>\r
+ </bean>\r
+\r
+ <bean id="vocabularyService" lazy-init="true"\r
+ class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
+ <property name="serviceUrl">\r
+ <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/vocabulary.service\r
+ </value>\r
+ </property>\r
+ <property name="serviceInterface">\r
+ <value>eu.etaxonomy.cdm.api.service.IVocabularyService</value>\r
+ </property>\r
+ <property name="httpInvokerRequestExecutor">\r
+ <bean class="eu.etaxonomy.taxeditor.service.CdmServiceRequestExecutor">\r
+ <property name="readTimeout" value="0" />\r
+ </bean>\r
+ </property>\r
+ </bean>\r
+\r
+ <bean id="workingSetService" lazy-init="true"\r
+ class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
+ <property name="serviceUrl">\r
+ <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/workingset.service\r
+ </value>\r
+ </property>\r
+ <property name="serviceInterface">\r
+ <value>eu.etaxonomy.cdm.api.service.IWorkingSetService</value>\r
+ </property>\r
+ <property name="httpInvokerRequestExecutor">\r
+ <bean class="eu.etaxonomy.taxeditor.service.CdmServiceRequestExecutor">\r
+ <property name="readTimeout" value="0" />\r
+ </bean>\r
+ </property>\r
+ </bean>\r
+\r
+ <bean id="grantedAuthorityService" lazy-init="true"\r
+ class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
+ <property name="serviceUrl">\r
+ <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/grantedauthority.service\r
+ </value>\r
+ </property>\r
+ <property name="serviceInterface">\r
+ <value>eu.etaxonomy.cdm.api.service.IGrantedAuthorityService\r
+ </value>\r
+ </property>\r
+ <property name="httpInvokerRequestExecutor">\r
+ <bean class="eu.etaxonomy.taxeditor.service.CdmServiceRequestExecutor">\r
+ <property name="readTimeout" value="0" />\r
+ </bean>\r
+ </property>\r
+ </bean>\r
+\r
+ <bean id="databaseService" lazy-init="true"\r
+ class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
+ <property name="serviceUrl">\r
+ <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/database.service\r
+ </value>\r
+ </property>\r
+ <property name="serviceInterface">\r
+ <value>eu.etaxonomy.cdm.api.service.IDatabaseService</value>\r
+ </property>\r
+ <property name="httpInvokerRequestExecutor">\r
+ <bean class="eu.etaxonomy.taxeditor.service.CdmServiceRequestExecutor">\r
+ <property name="readTimeout" value="0" />\r
+ </bean>\r
+ </property>\r
+ </bean>\r
+\r
+ <bean id="lsidAuthorityService" lazy-init="true"\r
+ class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
+ <property name="serviceUrl">\r
+ <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/lsidauthoruty.service\r
+ </value>\r
+ </property>\r
+ <property name="serviceInterface">\r
+ <value>eu.etaxonomy.cdm.api.service.lsid.LSIDAuthorityService\r
+ </value>\r
+ </property>\r
+ <property name="httpInvokerRequestExecutor">\r
+ <bean class="eu.etaxonomy.taxeditor.service.CdmServiceRequestExecutor">\r
+ <property name="readTimeout" value="0" />\r
+ </bean>\r
+ </property>\r
+ </bean>\r
+\r
+ <bean id="lsidMetadataService" lazy-init="true"\r
+ class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
+ <property name="serviceUrl">\r
+ <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/lsidmetadata.service\r
+ </value>\r
+ </property>\r
+ <property name="serviceInterface">\r
+ <value>eu.etaxonomy.cdm.api.service.lsid.LSIDMetadataService\r
+ </value>\r
+ </property>\r
+ <property name="httpInvokerRequestExecutor">\r
+ <bean class="eu.etaxonomy.taxeditor.service.CdmServiceRequestExecutor">\r
+ <property name="readTimeout" value="0" />\r
+ </bean>\r
+ </property>\r
+ </bean>\r
+\r
+ <bean id="lsiDataService" lazy-init="true"\r
+ class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
+ <property name="serviceUrl">\r
+ <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/lsiddata.service\r
+ </value>\r
+ </property>\r
+ <property name="serviceInterface">\r
+ <value>eu.etaxonomy.cdm.api.service.lsid.LSIDDataService</value>\r
+ </property>\r
+ <property name="httpInvokerRequestExecutor">\r
+ <bean class="eu.etaxonomy.taxeditor.service.CdmServiceRequestExecutor">\r
+ <property name="readTimeout" value="0" />\r
+ </bean>\r
+ </property>\r
+ </bean>\r
+\r
+\r
+\r
+ <bean id="primerService" lazy-init="true"\r
+ class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
+ <property name="serviceUrl">\r
+ <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/primer.service\r
+ </value>\r
+ </property>\r
+ <property name="serviceInterface">\r
+ <value>eu.etaxonomy.cdm.api.service.molecular.IPrimerService\r
+ </value>\r
+ </property>\r
+ <property name="httpInvokerRequestExecutor">\r
+ <bean class="eu.etaxonomy.taxeditor.service.CdmServiceRequestExecutor">\r
+ <property name="readTimeout" value="0" />\r
+ </bean>\r
+ </property>\r
+ </bean>\r
+\r
+ <bean id="amplificationService" lazy-init="true"\r
+ class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
+ <property name="serviceUrl">\r
+ <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/amplification.service\r
+ </value>\r
+ </property>\r
+ <property name="serviceInterface">\r
+ <value>eu.etaxonomy.cdm.api.service.molecular.IAmplificationService\r
+ </value>\r
+ </property>\r
+ <property name="httpInvokerRequestExecutor">\r
+ <bean class="eu.etaxonomy.taxeditor.service.CdmServiceRequestExecutor">\r
+ <property name="readTimeout" value="0" />\r
+ </bean>\r
+ </property>\r
+ </bean>\r
+\r
+ <bean id="sequenceService" lazy-init="true"\r
+ class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
+ <property name="serviceUrl">\r
+ <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/sequence.service\r
+ </value>\r
+ </property>\r
+ <property name="serviceInterface">\r
+ <value>eu.etaxonomy.cdm.api.service.molecular.ISequenceService\r
+ </value>\r
+ </property>\r
+ <property name="httpInvokerRequestExecutor">\r
+ <bean class="eu.etaxonomy.taxeditor.service.CdmServiceRequestExecutor">\r
+ <property name="readTimeout" value="0" />\r
+ </bean>\r
+ </property>\r
+ </bean>\r
+\r
+ <bean id="entityValidationService" lazy-init="true"\r
+ class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
+ <property name="serviceUrl">\r
+ <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/entityvalidation.service\r
+ </value>\r
+ </property>\r
+ <property name="serviceInterface">\r
+ <value>eu.etaxonomy.cdm.api.service.IEntityValidationService\r
+ </value>\r
+ </property>\r
+ <property name="httpInvokerRequestExecutor">\r
+ <bean class="eu.etaxonomy.taxeditor.service.CdmServiceRequestExecutor">\r
+ <property name="readTimeout" value="0" />\r
+ </bean>\r
+ </property>\r
+ </bean>\r
+\r
+ <bean id="entityConstraintViolationService" lazy-init="true"\r
+ class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
+ <property name="serviceUrl">\r
+ <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/entityconstraintviolation.service\r
+ </value>\r
+ </property>\r
+ <property name="serviceInterface">\r
+ <value>eu.etaxonomy.cdm.api.service.IEntityConstraintViolationService\r
+ </value>\r
+ </property>\r
+ <property name="httpInvokerRequestExecutor">\r
+ <bean class="eu.etaxonomy.taxeditor.service.CdmServiceRequestExecutor">\r
+ <property name="readTimeout" value="0" />\r
+ </bean>\r
+ </property>\r
+ </bean>\r
+ \r
+ <bean id="ioService" lazy-init="true"\r
+ class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
+ <property name="serviceUrl">\r
+ <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/io.service\r
+ </value>\r
+ </property>\r
+ <property name="serviceInterface">\r
+ <value>eu.etaxonomy.cdm.io.service.IIOService\r
+ </value>\r
+ </property>\r
+ <property name="httpInvokerRequestExecutor">\r
+ <bean class="eu.etaxonomy.taxeditor.service.CdmAuthenticatedHttpInvokerRequestExecutor">\r
+ <property name="readTimeout" value="0" />\r
+ </bean>\r
+ </property>\r
+ </bean>\r
+\r
+ <bean id="testService" lazy-init="true"\r
+ class="org.springframework.remoting.httpinvoker.HttpInvokerProxyFactoryBean">\r
+ <property name="serviceUrl">\r
+ <value>http://${remoteServer}:${remotePort}/${remoteContext}/remoting/test.service\r
+ </value>\r
+ </property>\r
+ <property name="serviceInterface">\r
+ <value>eu.etaxonomy.cdm.api.service.ITestService\r
+ </value>\r
+ </property>\r
+ <property name="httpInvokerRequestExecutor">\r
+ <bean class="eu.etaxonomy.taxeditor.service.CdmServiceRequestExecutor">\r
+ <property name="readTimeout" value="0" />\r
+ </bean>\r
+ </property>\r
+\r
+ </bean>\r
\r
\r
\r
<?xml version="1.0" encoding="UTF-8"?>
<beans xmlns="http://www.springframework.org/schema/beans"
- xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
- xmlns:context="http://www.springframework.org/schema/context"
- xmlns:tx="http://www.springframework.org/schema/tx"
- xsi:schemaLocation="http://www.springframework.org/schema/beans http://www.springframework.org/schema/beans/spring-beans-3.2.xsd
+ xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xmlns:context="http://www.springframework.org/schema/context"
+ xmlns:tx="http://www.springframework.org/schema/tx"
+ xsi:schemaLocation="http://www.springframework.org/schema/beans http://www.springframework.org/schema/beans/spring-beans-3.2.xsd
http://www.springframework.org/schema/tx http://www.springframework.org/schema/tx/spring-tx-3.2.xsd
http://www.springframework.org/schema/context http://www.springframework.org/schema/context/spring-context-3.2.xsd">
-
-
- <!-- Default application context and term initializer -->
- <import resource="classpath:/eu/etaxonomy/cdm/defaultApplicationContext.xml"/>
+
+
+ <!-- Default application context and term initializer -->
+ <import resource="classpath:/eu/etaxonomy/cdm/defaultApplicationContext.xml" />
<bean id="persistentTermInitializer" class="eu.etaxonomy.cdm.database.PersistentTermInitializer">
<property name="omit" value="false" />
</bean>
-
- <import resource="classpath:/eu/etaxonomy/cdm/remote.xml"/>
- <import resource="classpath:eu/etaxonomy/cdm/remote/json/jsonConfigurations.xml"/>
-
- <context:component-scan base-package="eu/etaxonomy/cdm/ext"/>
-
+
+ <context:component-scan base-package="eu/etaxonomy/taxeditor/session" />
+ <import resource="classpath:/eu/etaxonomy/cdm/remote.xml" />
+ <import resource="classpath:eu/etaxonomy/cdm/remote/json/jsonConfigurations.xml" />
+
+ <context:component-scan base-package="eu/etaxonomy/cdm/ext" />
+
<context:component-scan base-package="eu/etaxonomy/cdm/remote">
- <context:exclude-filter type="regex" expression="eu\.etaxonomy\.cdm\.remote\.config\.DataSourceConfigurer" />
- <context:exclude-filter type="regex" expression="eu\.etaxonomy\.cdm\.remote\.config\.LoggingConfigurer" />
- <context:exclude-filter type="regex" expression="eu\.etaxonomy\.cdm\.remote\.view\.PatternViewResolver" />
- <context:exclude-filter type="regex" expression="eu\.etaxonomy\.cdm\.remote\.vaadin\..*" />
- <context:exclude-filter type="regex" expression="eu\.etaxonomy\.cdm\.remote\.controller\..*Portal.*" />
+ <context:exclude-filter type="regex"
+ expression="eu\.etaxonomy\.cdm\.remote\.config\.DataSourceConfigurer" />
+ <context:exclude-filter type="regex"
+ expression="eu\.etaxonomy\.cdm\.remote\.config\.LoggingConfigurer" />
+ <context:exclude-filter type="regex"
+ expression="eu\.etaxonomy\.cdm\.remote\.view\.PatternViewResolver" />
+ <context:exclude-filter type="regex"
+ expression="eu\.etaxonomy\.cdm\.remote\.vaadin\..*" />
+ <context:exclude-filter type="regex"
+ expression="eu\.etaxonomy\.cdm\.remote\.controller\..*Portal.*" />
</context:component-scan>
-
+
+ <context:component-scan base-package="eu/etaxonomy/taxeditor/remoting/session/mock" />
</beans>
--- /dev/null
+<?xml version="1.0" encoding="UTF-8"?>\r
+<!DOCTYPE hibernate-configuration PUBLIC\r
+ "-//Hibernate/Hibernate Configuration DTD 3.0//EN"\r
+ "http://www.hibernate.org/dtd/hibernate-configuration-3.0.dtd">\r
+\r
+<hibernate-configuration>\r
+ <session-factory>\r
+\r
+ <property name="connection.release_mode">after_transaction</property>\r
+\r
+ <!-- Connection Pooling -->\r
+<!-- <property name="hibernate.connection.provider_class">org.hibernate.service.jdbc.connections.internal.C3P0ConnectionProvider</property> -->\r
+ <property name="hibernate.connection.provider_class">org.hibernate.service.jdbc.connections.internal.DatasourceConnectionProviderImpl</property>\r
+ <!--\r
+ Configuring the C3P0ConnectionProvider\r
+ ========================================\r
+ see http://www.mchange.com/projects/c3p0/index.html#hibernate-specific\r
+ and also org.springframework.orm.hibernate3.AbstractSessionFactoryBean.setDataSource(DataSource dataSource)\r
+\r
+ IMPORTANT:\r
+ Because of the constraint (1) the org.hibernate.connection.C3P0ConnectionProvider are not be used\r
+ for the Cdm Library because it requires the dataSource bean in some cases.\r
+\r
+ (1)\r
+ Do NOT specify the dataSource in the sessionFactory for example in the\r
+ org.springframework.orm.hibernate3.LocalSessionFactoryBean\r
+ !!!==> If *dataSource* is set, this will override corresponding settings in Hibernate properties.!!!\r
+ If this is set, the Hibernate settings should not define a connection provider to\r
+ avoid meaningless double configuration.\r
+ (2)\r
+ Hibernate uses the hibernate.c3p0.max_size property to determine if c3p0\r
+ is beeing used. Therefore the max_size property MUST be set. - maybe not need in hibernate 3.4 +\r
+\r
+ (3) If you are using Hibernate's C3P0ConnectionProvider you must set the following properties\r
+ in your hibernate configuration, using hibernate-specific configuration keys.\r
+ All other properties must be defined as usual in a c3p0.properties file.\r
+ This is confusing, and will hopefully be simplified some time in the future, but for now...\r
+ \r
+ DOCUMENTATION UPDATE (2015-05-22):\r
+ Hibernate's C3P0ConnectionProvider renames 7 c3p0 configuration properties, which, \r
+ if set in your hibernate configuration, will override any configuration you may have set \r
+ in a c3p0.properties file.\r
+ TODO: are points (2) and (3) still valid? I don't think so! (AK)\r
+\r
+ hibernate.c3p0.acquire_increment\r
+ hibernate.c3p0.idle_test_period\r
+ hibernate.c3p0.timeout\r
+ hibernate.c3p0.max_size\r
+ hibernate.c3p0.max_statements\r
+ hibernate.c3p0.min_size\r
+ hibernate.c3p0.validate\r
+ -->\r
+ <mapping package="eu.etaxonomy.cdm.model.common"/>\r
+ <!-- Annotation Package -->\r
+ <mapping class="eu.etaxonomy.cdm.model.agent.Address"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.agent.AgentBase"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.agent.Contact"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.agent.Institution"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.agent.InstitutionalMembership"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.agent.Person"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.agent.Team"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.agent.TeamOrPersonBase"/>\r
+ <!-- Common Package -->\r
+ <mapping class="eu.etaxonomy.cdm.model.common.Annotation"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.common.AnnotationType"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.common.Credit"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.common.DefinedTerm"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.common.DefinedTermBase"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.common.Extension"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.common.ExtensionType"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.common.IdentifiableSource"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.common.Identifier"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.common.IntextReference"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.common.GrantedAuthorityImpl"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.common.Group"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.common.Language"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.common.LanguageString"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.common.LSID"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.common.LSIDAuthority"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.common.Marker"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.common.MarkerType"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.common.OrderedTerm"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.common.OrderedTermBase"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.common.OrderedTermVocabulary"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.common.OriginalSourceBase"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.common.RelationshipTermBase"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.common.Representation"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.common.TermVocabulary"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.common.User"/>\r
+ <!-- Description Package -->\r
+ <mapping class="eu.etaxonomy.cdm.model.description.CategoricalData"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.description.CommonTaxonName"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.description.DescriptionBase"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.description.DescriptionElementBase"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.description.DescriptionElementSource"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.description.Distribution"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.description.Feature"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.description.FeatureNode"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.description.FeatureTree"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.description.KeyStatement"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.description.MediaKey"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.description.IndividualsAssociation"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.description.MeasurementUnit"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.description.MultiAccessKey"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.description.PolytomousKey"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.description.PolytomousKeyNode"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.description.PresenceAbsenceTerm"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.description.QuantitativeData"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.description.SpecimenDescription"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.description.State"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.description.StateData"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.description.StatisticalMeasure"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.description.StatisticalMeasurementValue"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.description.TaxonDescription"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.description.TaxonInteraction"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.description.TaxonNameDescription"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.description.TextData"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.description.TextFormat"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.description.WorkingSet"/>\r
+ <!-- Location Package -->\r
+ <mapping class="eu.etaxonomy.cdm.model.location.NamedArea"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.location.NamedAreaLevel"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.location.NamedAreaType"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.location.ReferenceSystem"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.location.Point"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.location.Country"/>\r
+ <!-- Media Package -->\r
+ <mapping class="eu.etaxonomy.cdm.model.media.AudioFile"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.media.ImageFile"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.media.Media"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.media.MediaRepresentation"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.media.MediaRepresentationPart"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.media.MovieFile"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.media.Rights"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.media.RightsType"/>\r
+ <!-- Meta Data Package -->\r
+ <mapping class="eu.etaxonomy.cdm.model.metadata.CdmMetaData"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.metadata.CdmPreference"/>\r
+ <!-- Molecular Package -->\r
+ <mapping class="eu.etaxonomy.cdm.model.molecular.PhylogeneticTree"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.molecular.DnaQuality"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.molecular.DnaSample"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.molecular.Amplification"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.molecular.AmplificationResult"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.molecular.Primer"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.molecular.Sequence"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.molecular.SequenceString"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.molecular.SingleRead"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.molecular.SingleReadAlignment"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.molecular.Cloning"/>\r
+ <!-- Name Package -->\r
+ <mapping class="eu.etaxonomy.cdm.model.name.BacterialName"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.name.BotanicalName"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.name.CultivarPlantName"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.name.HomotypicalGroup"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.name.HybridRelationship"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.name.HybridRelationshipType"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.name.NameRelationship"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.name.NameRelationshipType"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.name.NameTypeDesignation"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.name.NameTypeDesignationStatus"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.name.NomenclaturalCode"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.name.NomenclaturalStatus"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.name.NomenclaturalStatusType"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.name.NonViralName"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.name.Rank"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.name.SpecimenTypeDesignation"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.name.SpecimenTypeDesignationStatus"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.name.TaxonNameBase"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.name.TypeDesignationBase"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.name.ViralName"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.name.ZoologicalName"/>\r
+ <!-- Occurrence Package -->\r
+ <mapping class="eu.etaxonomy.cdm.model.occurrence.Collection"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.occurrence.DerivationEvent"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.occurrence.DerivationEventType"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.occurrence.DerivedUnit"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.occurrence.MaterialOrMethodEvent"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.occurrence.MediaSpecimen"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.occurrence.DeterminationEvent"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.occurrence.FieldUnit"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.occurrence.GatheringEvent"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.occurrence.PreservationMethod"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.occurrence.SpecimenOrObservationBase"/>\r
+ <!-- Reference Package -->\r
+ <mapping class="eu.etaxonomy.cdm.model.reference.Reference"/>\r
+\r
+ <!-- Taxon Package -->\r
+ <mapping class="eu.etaxonomy.cdm.model.taxon.Synonym"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.taxon.SynonymRelationship"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.taxon.SynonymRelationshipType"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.taxon.Taxon"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.taxon.TaxonBase"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.taxon.TaxonNode"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.taxon.TaxonNodeAgentRelation"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.taxon.Classification"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.taxon.TaxonRelationship"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.taxon.TaxonRelationshipType"/>\r
+ \r
+ <!-- Validation Package -->\r
+ <mapping class="eu.etaxonomy.cdm.model.validation.EntityValidation"/>\r
+ <mapping class="eu.etaxonomy.cdm.model.validation.EntityConstraintViolation"/>\r
+ \r
+ <!-- View Package -->\r
+ <mapping class="eu.etaxonomy.cdm.model.view.AuditEvent"/>\r
+ \r
+ <!-- for filling caches -->\r
+ <!-- since hibernate 4 listeners are not handled via hibernate.cfg.xml anymore -->\r
+ <!-- http://stackoverflow.com/questions/8616146/eventlisteners-using-hibernate-4-0-with-spring-3-1-0-release\r
+ https://community.jboss.org/wiki/HibernateCoreMigrationGuide40 -->\r
+\r
+ </session-factory>\r
+</hibernate-configuration>
\ No newline at end of file
<?xml version="1.0" encoding="UTF-8"?>\r
<beans xmlns="http://www.springframework.org/schema/beans"\r
- xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"\r
- xmlns:context="http://www.springframework.org/schema/context"\r
- xmlns:tx="http://www.springframework.org/schema/tx"\r
- xsi:schemaLocation="http://www.springframework.org/schema/beans http://www.springframework.org/schema/beans/spring-beans-3.2.xsd
- http://www.springframework.org/schema/tx http://www.springframework.org/schema/tx/spring-tx-3.2.xsd
- http://www.springframework.org/schema/context http://www.springframework.org/schema/context/spring-context-3.2.xsd">\r
- \r
- \r
- <!-- <bean id="remoteTermInitializer" class="eu.etaxonomy.cdm.remote.service.RemoteTermInitializer"/>-->\r
- \r
- <context:annotation-config/>\r
+ xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xmlns:context="http://www.springframework.org/schema/context"\r
+ xmlns:tx="http://www.springframework.org/schema/tx"\r
+ xsi:schemaLocation="http://www.springframework.org/schema/beans http://www.springframework.org/schema/beans/spring-beans-3.1.xsd
+ http://www.springframework.org/schema/tx http://www.springframework.org/schema/tx/spring-tx-3.1.xsd
+ http://www.springframework.org/schema/context http://www.springframework.org/schema/context/spring-context-3.1.xsd">\r
+\r
+ <import resource="classpath:/eu/etaxonomy/cdm/httpInvokerServiceClients.xml" />\r
+\r
+ <bean id="cdmEntitySessionManager" \r
+ class="eu.etaxonomy.taxeditor.session.CdmEntitySessionManager" />\r
+\r
+ <bean id="cdmApplicationRemoteConfiguration" \r
+ class="eu.etaxonomy.cdm.api.application.CdmApplicationRemoteConfiguration" />\r
+\r
+ \r
+ <bean id="cdmServiceRequestExecutor" \r
+ class="eu.etaxonomy.taxeditor.service.CdmServiceRequestExecutor" />\r
+ \r
+ <bean id="cachedCommonService" \r
+ class="eu.etaxonomy.taxeditor.service.CachedCommonServiceImpl" />\r
+ \r
+ \r
+ <bean id="defaultExport"\r
+ class="eu.etaxonomy.cdm.io.common.CdmApplicationAwareDefaultExport" />\r
\r
- <import resource="classpath:/eu/etaxonomy/cdm/httpInvokerServiceClients.xml"/>\r
+ <bean id="jaxbExport"\r
+ class="eu.etaxonomy.cdm.io.jaxb.JaxbExport" />\r
\r
- <bean id="cdmApplicationRemoteConfiguration" class="eu.etaxonomy.cdm.api.application.CdmApplicationRemoteConfiguration"/> \r
+ <bean id="accessDecisionManager" \r
+ class="eu.etaxonomy.cdm.persistence.hibernate.permission.UnanimousBasedUnrevokable" >\r
\r
- <import resource="classpath:/eu/etaxonomy/cdm/remoting_services_security.xml"/> \r
- \r
- <bean id="cdmTermCacher" class="eu.etaxonomy.cdm.api.cache.CdmTermCacher"/>\r
- \r
- \r
- <!-- EditGeoService was moved to ext. Therefore it will not be found by the default component scan.
- We added it here because the Editor needs it. However, this is only a temporary solution.
- In the future we want to pass in an application context with the editor. -->\r
-\r
-\r
- <!-- <bean id="conversationHolder" class="eu.etaxonomy.cdm.api.conversation.ConversationHolder" scope="prototype"/> -->\r
-\r
- <!-- TODO move to io -->\r
-<!-- \r
- <context:component-scan base-package="eu/etaxonomy/cdm/io">\r
- <context:exclude-filter type="regex" expression="eu\.etaxonomy\.cdm\.io\.berlinModel.*" />\r
- </context:component-scan>\r
- -->\r
- <!-- enable the configuration of transactional behavior based on annotations -->\r
- <!-- <tx:annotation-driven transaction-manager="transactionManager"/> -->\r
+ <property name="decisionVoters">\r
+ <list>\r
+ <bean\r
+ class="eu.etaxonomy.cdm.persistence.hibernate.permission.voter.GrantAlwaysVoter" />\r
+ <bean\r
+ class="eu.etaxonomy.cdm.persistence.hibernate.permission.voter.TaxonNodeVoter" />\r
+ <bean\r
+ class="eu.etaxonomy.cdm.persistence.hibernate.permission.voter.TaxonBaseVoter" />\r
+ <bean\r
+ class="eu.etaxonomy.cdm.persistence.hibernate.permission.voter.DescriptionBaseVoter" />\r
+ <bean\r
+ class="eu.etaxonomy.cdm.persistence.hibernate.permission.voter.DescriptionElementVoter" />\r
+ </list>\r
+ </property>\r
+ </bean>\r
+\r
+ <!-- CdmPermissionEvaluator.hasPermissions() evaluates the CdmPermissions \r
+ like TAXONNODE.UPDATE{20c8f083-5870-4cbd-bf56-c5b2b98ab6a7} -->\r
+ <bean id="cdmPermissionEvaluator" \r
+ class="eu.etaxonomy.cdm.persistence.hibernate.permission.CdmPermissionEvaluator">\r
+ <property name="accessDecisionManager" ref="accessDecisionManager" />\r
+ </bean>\r
+\r
+ <bean id="authenticationManager"\r
+ class="org.springframework.security.authentication.ProviderManager">\r
+ <property name="providers">\r
+ <list>\r
+ <ref local="daoAuthenticationProvider" />\r
+ </list>\r
+ </property>\r
+ </bean>\r
+\r
+ <bean id="daoAuthenticationProvider" \r
+ class="org.springframework.security.authentication.dao.DaoAuthenticationProvider">\r
+ <property name="userDetailsService" ref="userService" />\r
+ <property name="saltSource" ref="saltSource" />\r
+ <property name="passwordEncoder" ref="passwordEncoder" />\r
+ </bean>\r
+\r
+ <bean id="passwordEncoder" \r
+ class="org.springframework.security.authentication.encoding.Md5PasswordEncoder" />\r
+\r
+ <bean id="saltSource" \r
+ class="org.springframework.security.authentication.dao.ReflectionSaltSource">\r
+ <property name="userPropertyToUse" value="getUsername" />\r
+ </bean>\r
\r
</beans>\r
+++ /dev/null
-<?xml version="1.0" encoding="UTF-8"?>\r
-<beans xmlns="http://www.springframework.org/schema/beans"\r
- xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xmlns:context="http://www.springframework.org/schema/context"\r
- xmlns:tx="http://www.springframework.org/schema/tx" xmlns:aop="http://www.springframework.org/schema/aop"\r
- xsi:schemaLocation="http://www.springframework.org/schema/beans\r
- http://www.springframework.org/schema/beans/spring-beans-3.2.xsd\r
- http://www.springframework.org/schema/context http://www.springframework.org/schema/context/spring-context-3.2.xsd\r
- http://www.springframework.org/schema/tx http://www.springframework.org/schema/tx/spring-tx-3.2.xsd\r
- http://www.springframework.org/schema/aop http://www.springframework.org/schema/aop/spring-aop-3.2.xsd\r
- ">\r
-\r
-\r
- <!--\r
- ============================== SECURITY ==============================\r
- -->\r
- <bean id="accessDecisionManager" class="eu.etaxonomy.cdm.persistence.hibernate.permission.UnanimousBasedUnrevokable">\r
- <property name="decisionVoters">\r
- <list>\r
- <bean class="eu.etaxonomy.cdm.persistence.hibernate.permission.voter.GrantAlwaysVoter" />\r
- <bean class="eu.etaxonomy.cdm.persistence.hibernate.permission.voter.TaxonNodeVoter" />\r
- <bean class="eu.etaxonomy.cdm.persistence.hibernate.permission.voter.TaxonBaseVoter" />\r
- <bean class="eu.etaxonomy.cdm.persistence.hibernate.permission.voter.DescriptionBaseVoter" />\r
- <bean class="eu.etaxonomy.cdm.persistence.hibernate.permission.voter.DescriptionElementVoter" />\r
- </list>\r
- </property>\r
- </bean>\r
-\r
- <!--\r
- CdmPermissionEvaluator.hasPermissions() evaluates the CdmPermissions like TAXONNODE.UPDATE{20c8f083-5870-4cbd-bf56-c5b2b98ab6a7}\r
- -->\r
- <bean id="cdmPermissionEvaluator" class="eu.etaxonomy.cdm.persistence.hibernate.permission.CdmPermissionEvaluator">\r
- <property name="accessDecisionManager" ref="accessDecisionManager" />\r
- </bean>\r
-\r
- <!-- The CdmSecurityHibernateInterceptor checks onSave() and on flushDirty() if the currently authenticated principal or token has\r
- sufficient permissions on the entity to be persisted -->\r
- <bean id="securityHibernateInterceptor" class="eu.etaxonomy.cdm.persistence.hibernate.CdmSecurityHibernateInterceptor">\r
- <property name="permissionEvaluator" ref="cdmPermissionEvaluator" />\r
- </bean>\r
-\r
-</beans>\r
+++ /dev/null
-<?xml version="1.0" encoding="UTF-8"?>\r
-<beans xmlns="http://www.springframework.org/schema/beans"\r
- xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"\r
- xmlns:context="http://www.springframework.org/schema/context"\r
- xmlns:security="http://www.springframework.org/schema/security"\r
- xsi:schemaLocation="http://www.springframework.org/schema/beans http://www.springframework.org/schema/beans/spring-beans-3.2.xsd\r
- http://www.springframework.org/schema/tx http://www.springframework.org/schema/tx/spring-tx-3.2.xsd\r
- http://www.springframework.org/schema/context http://www.springframework.org/schema/context/spring-context-3.2.xsd\r
- http://www.springframework.org/schema/security http://www.springframework.org/schema/security/spring-security-3.1.xsd"\r
- >\r
-\r
- <import resource="classpath:/eu/etaxonomy/cdm/remoting_persistence_security.xml"/>\r
- <!--\r
- ======================================================================\r
- security specific configuration\r
- ======================================================================\r
- -->\r
- <security:global-method-security pre-post-annotations="enabled" run-as-manager-ref="runAsManager" >\r
- <security:expression-handler ref="expressionHandler" />\r
- </security:global-method-security>\r
-\r
- <!--\r
- To use "hasPermission()" in the Spring EL method annotations like @PreAuthorize we explicitly configure the permissionEvaluator\r
- the cdmPermissionEvaluator is already defined in the persistence security context\r
- -->\r
- <bean id="expressionHandler" class="org.springframework.security.access.expression.method.DefaultMethodSecurityExpressionHandler">\r
- <property name="permissionEvaluator" ref="cdmPermissionEvaluator" />\r
- </bean>\r
-\r
- <bean id="authenticationManager" class="org.springframework.security.authentication.ProviderManager">\r
- <property name="providers">\r
- <list>\r
- <ref local="daoAuthenticationProvider"/>\r
- </list>\r
- </property>\r
- </bean>\r
-\r
- <bean id="daoAuthenticationProvider" class="org.springframework.security.authentication.dao.DaoAuthenticationProvider">\r
- <property name="userDetailsService" ref="userService"/>\r
- <property name="saltSource" ref="saltSource"/>\r
- <property name="passwordEncoder" ref="passwordEncoder"/>\r
- </bean>\r
-\r
- <bean id="passwordEncoder" class="org.springframework.security.authentication.encoding.Md5PasswordEncoder"/>\r
-\r
- <bean id="saltSource" class="org.springframework.security.authentication.dao.ReflectionSaltSource">\r
- <property name="userPropertyToUse" value="getUsername"/>\r
- </bean>\r
-\r
- <!--\r
- Run-As Authentication Replacement for system operations\r
- as e.g. performed by the eu.etaxonomy.cdm.api.application.FirstDataInserter\r
-\r
- the key must match FirstDataInserter.RUN_AS_KEY\r
- -->\r
- <bean id="runAsManager"\r
- class="org.springframework.security.access.intercept.RunAsManagerImpl">\r
- <property name="key" value="TtlCx3pgKC4l"/>\r
- </bean>\r
-\r
-\r
-</beans>\r
--- /dev/null
+<?xml version="1.0" encoding="UTF-8"?>
+<!DOCTYPE log4j:configuration SYSTEM "log4j.dtd">
+<log4j:configuration xmlns:log4j="http://jakarta.apache.org/log4j/"
+ debug="false">
+ <appender name="CONSOLE" class="org.apache.log4j.ConsoleAppender">
+ <param name="Target" value="System.out" />
+ <layout class="org.apache.log4j.PatternLayout">
+ <param name="ConversionPattern" value="%d %p [%c] - %m%n" />
+ </layout>
+ <filter class="org.apache.log4j.filter.ExpressionFilter">
+ <param name="expression"
+ value="msg like '.*has a maxElementsInMemory of 0. This might lead to performance degradation or OutOfMemoryError at Terracotta client.*'" />
+ <param name="acceptOnMatch" value="false" />
+ </filter>
+ <filter class="org.apache.log4j.filter.ExpressionFilter">
+ <param name="expression"
+ value="msg like '.*object references was reached while attempting to calculate the size of the object graph.*'" />
+ <param name="acceptOnMatch" value="false" />
+ </filter>
+ </appender>
+ <root>
+ <priority value="WARN" />
+ <appender-ref ref="CONSOLE" />
+ </root>
+<!-- <logger name="org.hibernate.proxy.AbstractLazyInitializer"> -->
+<!-- <level value="info" /> -->
+<!-- </logger> -->
+<!-- <logger -->
+<!-- name="org.hibernate.collection.internal.AbstractPersistentCollection"> -->
+<!-- <level value="info" /> -->
+<!-- </logger> -->
+<!-- <logger -->
+<!-- name="eu.etaxonomy.taxeditor.service.CdmServiceRequestExecutor"> -->
+<!-- <level value="info" /> -->
+<!-- </logger> -->
+</log4j:configuration>
\ No newline at end of file
+++ /dev/null
-<?xml version="1.0" encoding="UTF-8"?>
-<beans xmlns="http://www.springframework.org/schema/beans"
- xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
- xmlns:context="http://www.springframework.org/schema/context"
- xsi:schemaLocation="http://www.springframework.org/schema/beans
- http://www.springframework.org/schema/beans/spring-beans-2.5.xsd
- http://www.springframework.org/schema/context
- http://www.springframework.org/schema/context/spring-context-2.5.xsd">
-
- <bean id="defaultRemoteSource">
- <property name="server" value="127.0.0.1"/>
- <property name="port" value="8080"/>
- <property name="contextPath" value=""/>
- </bean>
-
- <bean id="incompleteRemoteSource">
- <property name="server" value="127.0.0.1"/>
- <property name="contextPath" value=""/>
- </bean>
-
-</beans>
\ No newline at end of file
Bundle-ManifestVersion: 2
Bundle-Name: Editor Bundle
Bundle-SymbolicName: eu.etaxonomy.taxeditor.editor;singleton:=true
-Bundle-Version: 3.8.0.qualifier
+Bundle-Version: 3.12.0.qualifier
Bundle-Activator: eu.etaxonomy.taxeditor.editor.internal.TaxeditorEditorPlugin
Bundle-Vendor: %Bundle-Vendor.0
Bundle-Localization: OSGI-INF/l10n/plugin
eu.etaxonomy.taxeditor.editor.key.polytomous,
eu.etaxonomy.taxeditor.editor.name,
eu.etaxonomy.taxeditor.editor.name.handler,
+ eu.etaxonomy.taxeditor.editor.name.operation,
eu.etaxonomy.taxeditor.editor.view.concept,
eu.etaxonomy.taxeditor.editor.view.dataimport,
eu.etaxonomy.taxeditor.editor.view.descriptive,
CreateDerivateContextMenu_ADD=Hinzufügen...
-CreateDerivateContextMenu_DNA_SAMPLE=DNA Sample
+CreateDerivateContextMenu_DNA_SAMPLE=DNA Probe
CreateDerivateContextMenu_MEDIA=Media...
-CreateDerivateContextMenu_MEDIA_EXISTING=Media Specimen mit vorhandender Mediadatei
-CreateDerivateContextMenu_MEDIA_SPECIMEN=Media Specimen
+CreateDerivateContextMenu_MEDIA_EXISTING=Medienbeleg mit vorhandender Mediendatei
+CreateDerivateContextMenu_MEDIA_SPECIMEN=Medienbeleg
CreateDerivateContextMenu_NO_CHILD_DERIVATE=Keine Kind-Derivate
CreateDerivateContextMenu_SEQUENCE=Konsensussequenz
CreateDerivateContextMenu_SINGLE_READ=Single Read
plugin.xml,\
icons/,\
p2.inf,\
- OSGI-INF/l10n/plugin.properties,\
- OSGI-INF/l10n/plugin_de.properties
+ OSGI-INF/
commandId="eu.etaxonomy.taxeditor.editor.command.new.name"
label="%command.label.46"
style="push">
+ <visibleWhen
+ checkEnabled="true">
+ <reference
+ definitionId="isCdmStoreConnected">
+ </reference>
+ </visibleWhen>
</command>
<command
commandId="eu.etaxonomy.taxeditor.editor.command.new.reference"
label="%command.label.47"
style="push">
+ <visibleWhen
+ checkEnabled="true">
+ <reference
+ definitionId="isCdmStoreConnected">
+ </reference>
+ </visibleWhen>
</command>
<command
commandId="eu.etaxonomy.taxeditor.editor.command.new.team"
label="%command.label.1"
style="push">
+ <visibleWhen
+ checkEnabled="true">
+ <reference
+ definitionId="isCdmStoreConnected">
+ </reference>
+ </visibleWhen>
</command>
<command
commandId="eu.etaxonomy.taxeditor.editor.command.new.person"
label="%command.label.2"
style="push">
+ <visibleWhen
+ checkEnabled="true">
+ <reference
+ definitionId="isCdmStoreConnected">
+ </reference>
+ </visibleWhen>
</command>
<separator
name="eu.etaxonomy.navigation.menu.new.separator2"
commandId="eu.etaxonomy.taxeditor.editor.command.new.specimen"
label="%command.label.3"
style="push">
+ <visibleWhen
+ checkEnabled="true">
+ <reference
+ definitionId="isCdmStoreConnected">
+ </reference>
+ </visibleWhen>
</command>
<separator
name="eu.etaxonomy.navigation.menu.new.separator3"
class="eu.etaxonomy.taxeditor.editor.view.descriptive.handler.ToggleShowOnlyIndividualAssociationsHandler"
commandId="eu.etaxonomy.taxeditor.editor.handler.showOnlyIndividualAssociations">
</handler>
+ <handler
+ class="eu.etaxonomy.taxeditor.editor.key.polytomous.handler.RemotingCreateChildPolytomousKeyNodeHandler"
+ commandId="eu.etaxonomy.taxeditor.key.polytomous.command.new.child">
+ <activeWhen>
+ <reference
+ definitionId="isRemoting">
+ </reference>
+ </activeWhen>
+ </handler>
+ <handler
+ class="eu.etaxonomy.taxeditor.editor.key.polytomous.handler.RemotingCreateSiblingPolytomousKeyNodeHandler"
+ commandId="eu.etaxonomy.taxeditor.key.polytomous.command.new.sibling">
+ <activeWhen>
+ <reference
+ definitionId="isRemoting">
+ </reference>
+ </activeWhen>
+ </handler>
</extension>
<extension
name="%extension.name"
id="eu.etaxonomy.taxeditor.editor.view.descriptive.command.moveDescriptionElements"
name="%command.name.12">
</command>
+ <command
+ defaultHandler="eu.etaxonomy.taxeditor.editor.handler.OpenDerivateViewHandler"
+ id="eu.etaxonomy.taxeditor.editor.openSpecimenEditor"
+ name="Open Specimen Editor">
+ <commandParameter
+ id="eu.etaxonomy.taxeditor.specimenUuidParameter"
+ name="Specimen UUID parameter"
+ optional="true"
+ typeId="eu.etaxonomy.taxeditor.specimenUuidParameterType">
+ </commandParameter>
+ </command>
</extension>
+ <extension
+ point="org.eclipse.ui.commands">
+ <commandParameterType
+ converter="eu.etaxonomy.taxeditor.handler.UuidParameterConverter"
+ id="eu.etaxonomy.taxeditor.specimenUuidParameterType"
+ type="java.util.UUID">
+ </commandParameterType>
+ </extension>
<extension
point="org.eclipse.core.expressions.definitions">
<definition
</test>
</with>
</definition>
+ <definition
+ id="isRemoting">
+ <test
+ property="eu.etaxonomy.taxeditor.preference.CdmStorePropertyTester.isRemoting">
+ </test>
+ </definition>
<definition
id="isSequence">
<with
</description>
</wizard>
</extension>
- <extension
+ <extension
point="eu.etaxonomy.taxeditor.store.cdmViewer">
<cdmViewer
class="eu.etaxonomy.taxeditor.editor.EditorCdmViewer">
-<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/maven-v4_0_0.xsd">
+<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
+ xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/maven-v4_0_0.xsd">
<parent>
<groupId>eu.etaxonomy</groupId>
<artifactId>taxeditor-parent</artifactId>
- <version>3.8.0-SNAPSHOT</version>
+ <version>3.12.0-SNAPSHOT</version>
</parent>
<modelVersion>4.0.0</modelVersion>
<packaging>eclipse-plugin</packaging>
<name>Editor Bundle</name>
- <description />
+ <description></description>
<url>http://dev.e-taxonomy.eu/trac/wiki/TaxonomicEditorEditorBundle</url>
</project>
import org.eclipse.ui.IEditorInput;
import org.eclipse.ui.IEditorPart;
import org.eclipse.ui.IEditorReference;
+import org.eclipse.ui.IWorkbenchPage;
import org.eclipse.ui.PartInitException;
import org.eclipse.ui.handlers.HandlerUtil;
import eu.etaxonomy.cdm.api.service.ITaxonService;
+import eu.etaxonomy.cdm.model.common.ITreeNode;
import eu.etaxonomy.cdm.model.occurrence.DerivedUnit;
import eu.etaxonomy.cdm.model.occurrence.FieldUnit;
import eu.etaxonomy.cdm.model.occurrence.SpecimenOrObservationBase;
import eu.etaxonomy.cdm.model.taxon.TaxonBase;
+import eu.etaxonomy.cdm.model.taxon.TaxonNode;
import eu.etaxonomy.taxeditor.editor.group.authority.CdmAuthorityEditor;
import eu.etaxonomy.taxeditor.editor.group.authority.CdmAuthorityEditorInput;
import eu.etaxonomy.taxeditor.editor.internal.TaxeditorEditorPlugin;
open(input);
}
+// public static void openPolytomousKeyEditor(UUID polytomousKeyUuid, String name)
+// throws Exception {
+// PolytomousKeyEditorInput input = new PolytomousKeyEditorInput(polytomousKeyUuid, name);
+// open(input);
+// }
+
public static void openCdmAuthorities(UUID groupUuid)
throws Exception {
CdmAuthorityEditorInput input = CdmAuthorityEditorInput.NewInstance(groupUuid);
}
}
- /**
- * Iterates recursively over all originals having the given specimen as a derivate.
- * If a {@link FieldUnit} is found it is returned
- * @param specimen the start element for which the originals are iterated recursively
- * @return the FieldUnit if found, <code>null</code> otherwise
- */
- public static FieldUnit getFieldUnit(SpecimenOrObservationBase<?> specimen){
- SpecimenOrObservationBase<?> topMostDerivate = getTopMostDerivate(specimen);
- if(topMostDerivate instanceof FieldUnit) {
- return (FieldUnit) topMostDerivate;
- }
- return null;
- }
-
/**
* If the current selection is a single {@link TreeNode} it will be returned.
* @param selection the selection to check
openTaxonBase(((TaxonBase<?>) object).getUuid());
}
}
+
+ public static boolean closeObsoleteEditor(TaxonNode taxonNode, IWorkbenchPage activePage){
+ boolean result = true;
+ for (IEditorReference ref : activePage.getEditorReferences()) {
+ try {
+ String treeIndex = ((ITreeNode)taxonNode).treeIndex();
+
+
+ IEditorInput input = ref.getEditorInput();
+ if (input instanceof TaxonEditorInput) {
+ TaxonNode node = ((TaxonEditorInput) input).getTaxonNode();
+ //if node is a child of taxonNode then close the editor
+ if( ((ITreeNode) node).treeIndex().startsWith(treeIndex)){
+ //if (taxonNode.equals(node)) {
+ result &= activePage.closeEditor(ref.getEditor(false), true);
+
+ }
+ }
+ } catch (PartInitException e) {
+ continue;
+ }
+ }
+ return result;
+ }
}
* @version 1.0
*/
public class MultiPageTaxonEditor extends FormEditor implements
- IPartContentHasFactualData, IConversationEnabled, IPostOperationEnabled,
- IDirtyMarkable, IPartContentHasDetails, ISecuredEditor, IPartContentHasMedia {
-
- /** Constant <code>ID="eu.etaxonomy.taxeditor.editor.taxon"{trunked}</code> */
- public static final String ID = "eu.etaxonomy.taxeditor.editor.taxon";
-
- private boolean dirty;
-
- private ConversationHolder conversation;
- private IDataChangeBehavior dataChangeBehavior;
- private IUndoContext undoContext;
-
- private TaxonEditorInput input;
-
- /**
- * <p>
- * Constructor for MultiPageTaxonEditor.
- * </p>
- */
- public MultiPageTaxonEditor() {
- super();
- undoContext = new UndoContext();
- }
-
- /** {@inheritDoc} */
- @Override
- public void dispose() {
- conversation.unregisterForDataStoreChanges(this);
- conversation.close();
- super.dispose();
- }
-
- /** {@inheritDoc} */
- @Override
- protected void addPages() {
- input = (TaxonEditorInput) getEditorInput();
- conversation = input.getConversationHolder();
- conversation.registerForDataStoreChanges(this);
-
- try {
- addPage(Page.NAME.getIndex(), new TaxonNameEditor(this),
- getEditorInput());
- // setPageText(Page.NAME.getIndex(), Page.NAME.getTitle());
-
- // TODO lazy create
- // addPage(Page.DESCRIPTIVE.getIndex(), new
- // TaxonDescriptionTreeEditor(this), getEditorInput());
- // setPageText(Page.DESCRIPTIVE.getIndex(),
- // Page.DESCRIPTIVE.getTitle());
-
- // EditorUtil.showPropertySheet();
-
- } catch (PartInitException e) {
- MessagingUtils.error(getClass(), e);
- }
- }
-
- /** {@inheritDoc} */
- @Override
- public void doSave(IProgressMonitor monitor) {
- monitor.beginTask("Saving Editor", 4);
- try {
- if (!conversation.isBound()) {
- conversation.bind();
- }
- monitor.worked(1);
+IPartContentHasFactualData, IConversationEnabled, IPostOperationEnabled,
+IDirtyMarkable, IPartContentHasDetails, ISecuredEditor, IPartContentHasMedia {
+
+ /** Constant <code>ID="eu.etaxonomy.taxeditor.editor.taxon"{trunked}</code> */
+ public static final String ID = "eu.etaxonomy.taxeditor.editor.taxon";
+
+ private boolean dirty;
+
+ private ConversationHolder conversation;
+ private IDataChangeBehavior dataChangeBehavior;
+ private IUndoContext undoContext;
+
+ private TaxonEditorInput input;
+
+ /**
+ * <p>
+ * Constructor for MultiPageTaxonEditor.
+ * </p>
+ */
+ public MultiPageTaxonEditor() {
+ super();
+ undoContext = new UndoContext();
+
+ }
+
+ /** {@inheritDoc} */
+ @Override
+ public void dispose() {
+ input.dispose();
+ conversation.unregisterForDataStoreChanges(this);
+ conversation.close();
+ super.dispose();
+ }
+
+ /*
+ * (non-Javadoc)
+ *
+ * @see org.eclipse.ui.forms.editor.FormEditor#addPages()
+ */
+ /** {@inheritDoc} */
+ @Override
+ protected void addPages() {
+ input = (TaxonEditorInput) getEditorInput();
+ conversation = input.getConversationHolder();
+ conversation.registerForDataStoreChanges(this);
+
+ try {
+ addPage(Page.NAME.getIndex(), new TaxonNameEditor(this),
+ getEditorInput());
+ // setPageText(Page.NAME.getIndex(), Page.NAME.getTitle());
+
+ // TODO lazy create
+ // addPage(Page.DESCRIPTIVE.getIndex(), new
+ // TaxonDescriptionTreeEditor(this), getEditorInput());
+ // setPageText(Page.DESCRIPTIVE.getIndex(),
+ // Page.DESCRIPTIVE.getTitle());
+
+ // EditorUtil.showPropertySheet();
+
+ } catch (PartInitException e) {
+ MessagingUtils.error(getClass(), e);
+ }
+ }
+
+ /** {@inheritDoc} */
+ @Override
+ public void doSave(IProgressMonitor monitor) {
+ monitor.beginTask("Saving Editor", 4);
+ try {
+ if (!conversation.isBound()) {
+ conversation.bind();
+ }
+ monitor.worked(1);
for (IEditorPart editorPage : getPages()) {
if (editorPage instanceof TaxonNameEditor) {
monitor.worked(1);
}
- // commit the conversation and start a new transaction immediately
- conversation.commit(true);
- monitor.worked(1);
+ // commit the conversation and start a new transaction immediately
+
+ input.merge();
+ conversation.commit(true);
+ monitor.worked(1);
this.setDirty(false);
monitor.worked(1);
} finally {
monitor.done();
}
- }
-
- private void disableEditor(boolean isOnError) {
- for (IMultiPageTaxonEditorPage editorPage : getPages()) {
- if(isOnError){
- editorPage.setOnError();
- }else {
- editorPage.setDisabled();
- }
- }
- conversation.unregisterForDataStoreChanges(this);
- conversation.close();
- setDirty(false);
- }
-
- private void setDirty(boolean dirty) {
- this.dirty = dirty;
- firePropertyChange(PROP_DIRTY);
- }
-
- @Override
+ }
+
+ private void disableEditor(boolean isOnError) {
+ for (IMultiPageTaxonEditorPage editorPage : getPages()) {
+ if(isOnError){
+ editorPage.setOnError();
+ }else {
+ editorPage.setDisabled();
+ }
+ }
+
+ conversation.unregisterForDataStoreChanges(this);
+ conversation.close();
+ setDirty(false);
+ }
+
+ private void setDirty(boolean dirty) {
+ this.dirty = dirty;
+ firePropertyChange(PROP_DIRTY);
+ }
+
+ /*
+ * (non-Javadoc)
+ *
+ * @see org.eclipse.ui.part.MultiPageEditorPart#isDirty()
+ */
+ /**
+ * <p>
+ * isDirty
+ * </p>
+ *
+ * @return a boolean.
+ */
+ @Override
public boolean isDirty() {
- return dirty;
- }
-
- /** {@inheritDoc} */
- @Override
- public void editorDirtyStateChanged() {
- dirty = true;
- super.editorDirtyStateChanged();
- }
-
- /**
- * {@inheritDoc}
- *
- * Checks whether nested editors are calling
- * <code>firePropertyChange(PROP_DIRTY)</code> to signal an edit has taken
- * place before passing property change along to
- * <code>super.handlePropertyChange(int propertyId)</code>.
- */
- @Override
+ return dirty;
+ }
+
+ /*
+ * (non-Javadoc)
+ *
+ * @see org.eclipse.ui.forms.editor.FormEditor#editorDirtyStateChanged()
+ */
+ /** {@inheritDoc} */
+ @Override
+ public void editorDirtyStateChanged() {
+ dirty = true;
+ super.editorDirtyStateChanged();
+ }
+
+ /**
+ * {@inheritDoc}
+ *
+ * Checks whether nested editors are calling
+ * <code>firePropertyChange(PROP_DIRTY)</code> to signal an edit has taken
+ * place before passing property change along to
+ * <code>super.handlePropertyChange(int propertyId)</code>.
+ */
+ /*
+ * (non-Javadoc)
+ *
+ * @see org.eclipse.ui.part.MultiPageEditorPart#handlePropertyChange(int)
+ */
+ @Override
protected void handlePropertyChange(int propertyId) {
- if (propertyId == PROP_DIRTY) {
- setDirty(true);
- }
- super.handlePropertyChange(propertyId);
- }
-
- /** {@inheritDoc} */
- @Override
- public void doSaveAs() {
- }
-
- /** {@inheritDoc} */
- @Override
- public boolean isSaveAsAllowed() {
- return false;
- }
-
- /** {@inheritDoc} */
- @Override
- public void init(IEditorSite site, IEditorInput input)
- throws PartInitException {
-
- if (!(input instanceof TaxonEditorInput)) {
+ if (propertyId == PROP_DIRTY) {
+ setDirty(true);
+ }
+ super.handlePropertyChange(propertyId);
+ }
+
+ /** {@inheritDoc} */
+ @Override
+ public void doSaveAs() {
+ }
+
+ /** {@inheritDoc} */
+ @Override
+ public boolean isSaveAsAllowed() {
+ return false;
+ }
+
+ /** {@inheritDoc} */
+ @Override
+ public void init(IEditorSite site, IEditorInput input)
+ throws PartInitException {
+
+ if (!(input instanceof TaxonEditorInput)) {
throw new PartInitException(
- "Invalid Input: Must be TaxonEditorInput");
+ "Invalid Input: Must be TaxonEditorInput");
+ }
+
+ this.input = (TaxonEditorInput) input;
+
+
+ // try {
+ // // Listen for name changes,
+ // // change tab for this taxon editor accordingly
+ // getTaxon().addPropertyChangeListener("name",
+ // new PropertyChangeListener() {
+ // public void propertyChange(PropertyChangeEvent e) {
+ // setPartName();
+ // }
+ // });
+ // } catch (NullPointerException e) {
+ // EditorUtil.warn(getClass(),
+ // "Caught an NPE while initing an editor. This is most " +
+ // "likely due to the unsuccesful attempt to restore the former " +
+ // "state of the application. We ignore this because the workbench " +
+ // "will simply be reset.");
+ // }
+ setPartName();
+
+ super.init(site, input);
+ }
+
+ /**
+ * Calls <code>MultiPageEditorPart.setPartName(String partName)</code> with
+ * text appropriate to the state of the taxon: any taxon that has been saved
+ * will by necessity have a name to display; a new taxon should display
+ * "New taxon" in the editor tab.
+ */
+ protected void setPartName() {
+
+ String partName = null;
+ TaxonNameBase<?, ?> name = getTaxon().getName();
+
+ if (name != null) {
+ partName = name.getTitleCache();
+ }
+
+ if (partName == null || partName.equals("")) {
+ partName = ("New taxon");
}
- this.input = (TaxonEditorInput) input;
-
- // try {
- // // Listen for name changes,
- // // change tab for this taxon editor accordingly
- // getTaxon().addPropertyChangeListener("name",
- // new PropertyChangeListener() {
- // public void propertyChange(PropertyChangeEvent e) {
- // setPartName();
- // }
- // });
- // } catch (NullPointerException e) {
- // EditorUtil.warn(getClass(),
- // "Caught an NPE while initing an editor. This is most " +
- // "likely due to the unsuccesful attempt to restore the former " +
- // "state of the application. We ignore this because the workbench " +
- // "will simply be reset.");
- // }
- setPartName();
-
- super.init(site, input);
- }
-
- /**
- * Calls <code>MultiPageEditorPart.setPartName(String partName)</code> with
- * text appropriate to the state of the taxon: any taxon that has been saved
- * will by necessity have a name to display; a new taxon should display
- * "New taxon" in the editor tab.
- */
- protected void setPartName() {
-
- String partName = null;
- TaxonNameBase<?, ?> name = getTaxon().getName();
-
- if (name != null) {
- partName = name.getTitleCache();
- }
-
- if (partName == null || partName.equals("")) {
- partName = ("New taxon");
- }
-
- setPartName(partName);
- }
+ setPartName(partName);
+ }
/**
* {@inheritDoc}
setPartName();
}
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.model.IDirtyMarkableSelectionProvider#forceDirty()
+ */
@Override
public void forceDirty() {
changed(null);
}
- /**
- * The accepted taxon that is the input for this editor
- *
- * @return the accepted taxon
- */
- public Taxon getTaxon() {
- return input.getTaxon();
- }
+ /**
+ * The accepted taxon that is the input for this editor
+ *
+ * @return the accepted taxon
+ */
+ public Taxon getTaxon() {
+ return input.getTaxon();
+ }
- @Override
+ /*
+ * (non-Javadoc)
+ *
+ * @see
+ * eu.etaxonomy.cdm.api.conversation.IConversationEnabled#getConversationHolder
+ * ()
+ */
+ /**
+ * <p>
+ * getConversationHolder
+ * </p>
+ *
+ * @return a {@link eu.etaxonomy.cdm.api.conversation.ConversationHolder}
+ * object.
+ */
+ @Override
public ConversationHolder getConversationHolder() {
- return conversation;
- }
-
- public void setConversationHolder(ConversationHolder conversation) {
- this.conversation = conversation;
- }
-
- public IUndoContext getUndoContext() {
- return undoContext;
- }
-
- public void setUndoContext(IUndoContext undoContext) {
- this.undoContext = undoContext;
- }
-
- /** {@inheritDoc} */
- @Override
- public void setFocus() {
- // logger.warn("Setting focus to editor");
- // bind the conversation
- getConversationHolder().bind();
- // pass focus to the active editor page
- getActiveEditor().setFocus();
- }
-
- /** {@inheritDoc} */
+ return conversation;
+ }
+
+ /**
+ * <p>
+ * setConversationHolder
+ * </p>
+ *
+ * @param conversation
+ * a {@link eu.etaxonomy.cdm.api.conversation.ConversationHolder}
+ * object.
+ */
+ public void setConversationHolder(ConversationHolder conversation) {
+ this.conversation = conversation;
+ }
+
+ /**
+ * <p>
+ * Getter for the field <code>undoContext</code>.
+ * </p>
+ *
+ * @return a {@link org.eclipse.core.commands.operations.IUndoContext}
+ * object.
+ */
+ public IUndoContext getUndoContext() {
+ return undoContext;
+ }
+
+ /**
+ * <p>
+ * Setter for the field <code>undoContext</code>.
+ * </p>
+ *
+ * @param undoContext
+ * a {@link org.eclipse.core.commands.operations.IUndoContext}
+ * object.
+ */
+ public void setUndoContext(IUndoContext undoContext) {
+ this.undoContext = undoContext;
+ }
+
+ /** {@inheritDoc} */
+ @Override
+ public void setFocus() {
+ // logger.warn("Setting focus to editor");
+ // bind the conversation
+ getConversationHolder().bind();
+ input.bind();
+ // pass focus to the active editor page
+ getActiveEditor().setFocus();
+ }
+
+ /*
+ * (non-Javadoc)
+ *
+ * @see
+ * eu.etaxonomy.cdm.persistence.hibernate.ICdmPostCrudObserver#update(eu
+ * .etaxonomy.cdm.persistence.hibernate.CdmCrudEvent)
+ */
+ /** {@inheritDoc} */
@Override
public void update(CdmDataChangeMap events) {
if (dataChangeBehavior == null) {
DataChangeBridge.handleDataChange(events, dataChangeBehavior);
}
+ /*
+ * (non-Javadoc)
+ *
+ * @see
+ * eu.etaxonomy.taxeditor.store.operations.IPostOperationEnabled#postOperation
+ * ()
+ */
/** {@inheritDoc} */
@Override
public boolean postOperation(CdmBase objectAffectedByOperation) {
return false;
}
- /**
- * Returns an <code>IEditorPart</code> implementation by type
- *
- * @param page
- * the page type
- * @return a {@link eu.etaxonomy.taxeditor.editor.IMultiPageTaxonEditorPage}
- * object.
- */
- public IMultiPageTaxonEditorPage getPage(Page page) {
- for (IEditorPart editor : this.getPages()) {
- if (editor.getClass().equals(page.getClazz())) {
- return (IMultiPageTaxonEditorPage) editor;
- }
- }
- return null;
- }
-
- /**
- * Return a list of <code>AbstractTaxonEditor</code>s registered with this
- * <code>MultiPageTaxonEditor</code>.
- *
- * @return a {@link java.util.List} object.
- */
- public List<IMultiPageTaxonEditorPage> getPages() {
- ArrayList<IMultiPageTaxonEditorPage> editors = new ArrayList<IMultiPageTaxonEditorPage>();
- for (int i = 0; i < this.getPageCount(); i++) {
-
- editors.add((IMultiPageTaxonEditorPage) this.getEditor(i));
- }
- return editors;
- }
-
- /**
- * Refreshes a certain page of the MultipageTaxonEditor
- *
- * @param page
- * a {@link eu.etaxonomy.taxeditor.editor.Page} object.
- * @return a boolean.
- */
- public boolean redraw(Page page) {
- return redraw(page, true);
- }
-
- /**
- * Refreshes a certain page of the MultipageTaxonEditor and sets focus to
- * that page
- *
- * @param page
- * a {@link eu.etaxonomy.taxeditor.editor.Page} object.
- * @param focus
- * a boolean.
- * @return a boolean.
- */
- public boolean redraw(Page page, boolean focus) {
- IMultiPageTaxonEditorPage editorPage = getPage(page);
- return editorPage != null && editorPage.redraw(focus);
- }
-
- @Override
+ /**
+ * Returns an <code>IEditorPart</code> implementation by type
+ *
+ * @param page
+ * the page type
+ * @return a {@link eu.etaxonomy.taxeditor.editor.IMultiPageTaxonEditorPage}
+ * object.
+ */
+ public IMultiPageTaxonEditorPage getPage(Page page) {
+ for (IEditorPart editor : this.getPages()) {
+ if (editor.getClass().equals(page.getClazz())) {
+ return (IMultiPageTaxonEditorPage) editor;
+ }
+ }
+ return null;
+ }
+
+ /**
+ * Return a list of <code>AbstractTaxonEditor</code>s registered with this
+ * <code>MultiPageTaxonEditor</code>.
+ *
+ * @return a {@link java.util.List} object.
+ */
+ public List<IMultiPageTaxonEditorPage> getPages() {
+ ArrayList<IMultiPageTaxonEditorPage> editors = new ArrayList<IMultiPageTaxonEditorPage>();
+ for (int i = 0; i < this.getPageCount(); i++) {
+
+ editors.add((IMultiPageTaxonEditorPage) this.getEditor(i));
+ }
+ return editors;
+ }
+
+ /**
+ * Refreshes a certain page of the MultipageTaxonEditor
+ *
+ * @param page
+ * a {@link eu.etaxonomy.taxeditor.editor.Page} object.
+ * @return a boolean.
+ */
+ public boolean redraw(Page page) {
+ return redraw(page, true);
+ }
+
+ /**
+ * Refreshes a certain page of the MultipageTaxonEditor and sets focus to
+ * that page
+ *
+ * @param page
+ * a {@link eu.etaxonomy.taxeditor.editor.Page} object.
+ * @param focus
+ * a boolean.
+ * @return a boolean.
+ */
+ public boolean redraw(Page page, boolean focus) {
+ IMultiPageTaxonEditorPage editorPage = getPage(page);
+ return editorPage != null && editorPage.redraw(focus);
+ }
+
+ /**
+ * <p>
+ * onComplete
+ * </p>
+ *
+ * @return a boolean.
+ */
+ @Override
public boolean onComplete() {
- return false;
- }
+ return false;
+ }
/**
* Reloads the data for this
}
}
- @Override
- public String toString() {
- return String.format("%s[%s]", this.getClass().getSimpleName(), getEditorInput());
- }
-
- @Override
- public boolean permissionsSatisfied() {
- IEditorPart activeEditor = getActiveEditor();
- if(activeEditor != null && ISecuredEditor.class.isAssignableFrom(activeEditor.getClass())){
- return ((ISecuredEditor)activeEditor).permissionsSatisfied();
- }
- return true;
- }
-
- @Override
- public boolean canAttachMedia() {
- return true;
- }
+ @Override
+ public String toString() {
+ return String.format("%s[%s]", this.getClass().getSimpleName(), getEditorInput());
+ }
+
+ @Override
+ public boolean permissionsSatisfied() {
+ IEditorPart activeEditor = getActiveEditor();
+ if(activeEditor != null && ISecuredEditor.class.isAssignableFrom(activeEditor.getClass())){
+ return ((ISecuredEditor)activeEditor).permissionsSatisfied();
+ }
+ return true;
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.model.IPartContentHasMedia#canAttachMedia()
+ */
+ @Override
+ public boolean canAttachMedia() {
+ return true;
+ }
+
}
/**
-* Copyright (C) 2007 EDIT
-* European Distributed Institute of Taxonomy
-* http://www.e-taxonomy.eu
-*
-* The contents of this file are subject to the Mozilla Public License Version 1.1
-* See LICENSE.TXT at the top of this package for the full license terms.
-*/
+ * Copyright (C) 2007 EDIT
+ * European Distributed Institute of Taxonomy
+ * http://www.e-taxonomy.eu
+ *
+ * The contents of this file are subject to the Mozilla Public License Version 1.1
+ * See LICENSE.TXT at the top of this package for the full license terms.
+ */
package eu.etaxonomy.taxeditor.editor;
+import java.util.ArrayList;
+import java.util.Arrays;
import java.util.HashSet;
+import java.util.List;
+import java.util.Map;
import java.util.Set;
import java.util.UUID;
* @created 19.03.2009
* @version 1.0
*/
-public class TaxonEditorInput implements IEditorInput, IConversationEnabled, IPersistableElement {
+public class TaxonEditorInput extends CdmEntitySessionInput implements IEditorInput, IConversationEnabled, IPersistableElement {
- private final ConversationHolder conversation;
+ private final ConversationHolder conversation;
- private final TaxonNode taxonNode;
+ private TaxonNode taxonNode;
- private TaxonEditorInputDataChangeBehaviour dataChangeBehavior;
+ private TaxonEditorInputDataChangeBehaviour dataChangeBehavior;
- private TaxonBase initiallySelectedTaxonBase;
+ private TaxonBase initiallySelectedTaxonBase;
- private TaxonEditorInput(TaxonNode taxonNode, ConversationHolder conversation){
- this.conversation = conversation;
- this.taxonNode = taxonNode;
- }
+ private enum CdmType {
+ TAXON_NODE,
+ TAXON_BASE,
+ PARENT_TAXON_NODE
+ }
+ private TaxonEditorInput(UUID uuid, CdmType type) {
+ super(true);
+ this.conversation = CdmStore.createConversation();
+ switch(type) {
+ case PARENT_TAXON_NODE:
+ initForParentTaxonNode(uuid);
+ break;
+ case TAXON_BASE:
+ initForTaxonBase(uuid);
+ break;
+ case TAXON_NODE:
+ initForTaxonNode(uuid);
+ break;
+ }
+ }
+ private void init(TaxonNode taxonNode) {
+ this.taxonNode = taxonNode;
+ }
- /**
- * <p>NewInstance</p>
- *
- * @param taxonNodeUuid a {@link java.util.UUID} object.
- * @return a {@link eu.etaxonomy.taxeditor.editor.TaxonEditorInput} object.
- * @throws java.lang.Exception if any.
- */
- public static TaxonEditorInput NewInstance(UUID taxonNodeUuid) throws Exception{
- try{
- ConversationHolder conversation = CdmStore.createConversation();
- return NewInstance(taxonNodeUuid, conversation);
- }catch(Exception e){
- throw e;
- }
- }
/**
+ * <p>NewInstance</p>
*
- * @param taxonNodeUuid
- * @param conversation
- * @return
+ * @param taxonNodeUuid a {@link java.util.UUID} object.
+ * @return a {@link eu.etaxonomy.taxeditor.editor.TaxonEditorInput} object.
+ * @throws java.lang.Exception if any.
*/
- private static TaxonEditorInput NewInstance(UUID taxonNodeUuid, ConversationHolder conversation){
+ private void initForTaxonNode(UUID taxonNodeUuid) {
- TaxonNode taxonNode = CdmStore.getService(ITaxonNodeService.class).load(taxonNodeUuid, null);
+ TaxonNode taxonNode = CdmStore.getService(ITaxonNodeService.class).load(taxonNodeUuid, getTaxonNodePropertyPaths());
- if(taxonNode == null){
- MessagingUtils.warningDialog("Not yet implemented", TaxonEditorInput.class, "Selected element is not of type TaxonNode but [null].");
- return null;
- }
+ if(taxonNode == null){
+ MessagingUtils.warningDialog("Not yet implemented", TaxonEditorInput.class, "Selected element is not type TaxonBase.");
+ }
+ init(taxonNode);
+
+ }
- return new TaxonEditorInput(taxonNode, conversation);
+ private void initForTaxonBase(UUID taxonBaseUuid) {
+ TaxonBase taxonBase = CdmStore.getService(ITaxonService.class).load(taxonBaseUuid, getTaxonBasePropertyPaths());
+ if (taxonBase != null){
+ if(taxonBase.isInstanceOf(Taxon.class)){
+ Taxon taxon = CdmBase.deproxy(taxonBase, Taxon.class);
+
+ if (taxon.getTaxonNodes().size() == 0 && taxon.isMisapplication()){
+ // TODO get accepted taxon
+ MessagingUtils.info("trying to open Mispplied Name ");
+
+ Set<Taxon> acceptedTaxa = new HashSet<Taxon>();
+ Set<TaxonRelationship> relations = taxon.getRelationsFromThisTaxon();
+ for(TaxonRelationship relation : relations){
+ if(relation.getType().equals(TaxonRelationshipType.MISAPPLIED_NAME_FOR())){
+ acceptedTaxa.add(relation.getToTaxon());
+ }
+ }
+ setInputForMultipleTaxa(conversation, acceptedTaxa);
+
+ }else{
+ setInputForMultipleNodes(conversation, taxon.getTaxonNodes());
+ }
+ }else if(taxonBase instanceof Synonym){
+ Synonym synonym = (Synonym) taxonBase;
+
+ Set<Taxon> taxa = synonym.getAcceptedTaxa();
+ setInputForMultipleTaxa(conversation, taxa);
+ }
+ }
}
+
/**
- * <p>NewInstanceFromTaxonBase</p>
+ * <p>NewEmptyInstance</p>
*
- * @param taxonBaseUuid a {@link java.util.UUID} object.
+ * @param parentNodeUuid a {@link java.util.UUID} object.
* @return a {@link eu.etaxonomy.taxeditor.editor.TaxonEditorInput} object.
*/
- public static TaxonEditorInput NewInstanceFromTaxonBase(UUID taxonBaseUuid){
- ConversationHolder conversation = CdmStore.createConversation();
-
- TaxonEditorInput input = null;
-
- TaxonBase taxonBase = CdmStore.getService(ITaxonService.class).find(taxonBaseUuid);
- if (taxonBase != null){
- if(taxonBase.isInstanceOf(Taxon.class)){
- Taxon taxon = CdmBase.deproxy(taxonBase, Taxon.class);
-
- if (taxon.getTaxonNodes().size() == 0 && taxon.isMisapplication()){
- // TODO get accepted taxon
- MessagingUtils.info("trying to open misapplied Name ");
-
- Set<Taxon> acceptedTaxa = new HashSet<Taxon>();
- Set<TaxonRelationship> relations = taxon.getRelationsFromThisTaxon();
- for(TaxonRelationship relation : relations){
- if(relation.getType().equals(TaxonRelationshipType.MISAPPLIED_NAME_FOR())){
- acceptedTaxa.add(relation.getToTaxon());
- }
- }
- input = getInputForMultipleTaxa(conversation, acceptedTaxa);
-
- }else{
- input = getInputForMultipleNodes(conversation, taxon.getTaxonNodes());
- }
- }else if(taxonBase instanceof Synonym){
- Synonym synonym = (Synonym) taxonBase;
-
- Set<Taxon> taxa = synonym.getAcceptedTaxa();
- input = getInputForMultipleTaxa(conversation, taxa);
- }
- if (input != null){
- input.setInitiallySelectedTaxonBase(taxonBase);
- }
- }
-
-
- return input;
+ private void initForParentTaxonNode(UUID parentNodeUuid){
+
+
+ TaxonNameBase<?, ?> name = PreferencesUtil.getPreferredNomenclaturalCode().getNewTaxonNameInstance(null);
+ ITaxonTreeNode parentNode = CdmStore.getService(IClassificationService.class).getTreeNodeByUuid(parentNodeUuid);
+
+ Taxon newTaxon = Taxon.NewInstance(name, parentNode.getReference());
+ TaxonNode newTaxonNode = parentNode.addChildTaxon(newTaxon, parentNode.getReference(), parentNode.getMicroReference());
+
+ // add the new taxon to the editors persistence context
+ UUID newTaxonNodeUuid = CdmStore.getService(ITaxonNodeService.class).save(newTaxonNode).getUuid();
+
+ initForTaxonNode(newTaxonNodeUuid);
}
- private static TaxonEditorInput getInputForMultipleNodes(ConversationHolder conversation, Set<TaxonNode> taxonNodes){
- if(taxonNodes.size() == 1){
- TaxonNode taxonNode = taxonNodes.iterator().next();
- return NewInstance(taxonNode.getUuid(), conversation);
- }else if(taxonNodes.size() > 1){
- TaxonNode taxonNode = ChooseFromMultipleTaxonNodesDialog.choose(taxonNodes);
- if(taxonNode != null){
- return NewInstance(taxonNode.getUuid(), conversation);
- }
- }else if(taxonNodes.size() == 0){
- // this is an undesired state
- MessagingUtils.warningDialog("Incorrect state", TaxonEditorInput.class, "The accepted taxon is not part of any classification. This should not have happened.");
- }
- return null;
+
+
+
+ private void setInputForMultipleNodes(ConversationHolder conversation, Set<TaxonNode> taxonNodes){
+ if(taxonNodes.size() == 1){
+ TaxonNode taxonNode = taxonNodes.iterator().next();
+ init(taxonNode);
+ }else if(taxonNodes.size() > 1){
+ TaxonNode taxonNode = ChooseFromMultipleTaxonNodesDialog.choose(taxonNodes);
+ if(taxonNode != null){
+ init(taxonNode);
+ }
+ }else if(taxonNodes.size() == 0){
+ // this is an undesired state
+ MessagingUtils.warningDialog("Incorrect state", TaxonEditorInput.class, "The accepted taxon is not part of any classification. This should not have happened.");
+ }
}
- private static TaxonEditorInput getInputForMultipleTaxa(ConversationHolder conversation, Set<Taxon> taxa){
- if(taxa.size() == 1){
- Taxon taxon = taxa.iterator().next();
- Set<TaxonNode> nodes = taxon.getTaxonNodes();
- return getInputForMultipleNodes(conversation, nodes);
- }else if(taxa.size() > 1){
- Set<TaxonNode> taxonNodes = new HashSet<TaxonNode>();
- for ( Taxon taxon : taxa ){
- taxonNodes.addAll(taxon.getTaxonNodes());
- }
- return getInputForMultipleNodes(conversation, taxonNodes);
- }else if(taxa.size() == 0){
- // this is an undesired state
- MessagingUtils.warningDialog("Incorrect state", TaxonEditorInput.class, "Trying to open accepted taxon for a synonym or misapplication but" +
- " no accepted taxa are present. This should not have happened.");
- }
- return null;
+ private void setInputForMultipleTaxa(ConversationHolder conversation, Set<Taxon> taxa){
+ if(taxa.size() == 1){
+ Taxon taxon = taxa.iterator().next();
+ Set<TaxonNode> nodes = taxon.getTaxonNodes();
+ setInputForMultipleNodes(conversation, nodes);
+ }else if(taxa.size() > 1){
+ Set<TaxonNode> taxonNodes = new HashSet<TaxonNode>();
+ for ( Taxon taxon : taxa ){
+ taxonNodes.addAll(taxon.getTaxonNodes());
+ }
+ setInputForMultipleNodes(conversation, taxonNodes);
+ }else if(taxa.size() == 0){
+ // this is an undesired state
+ MessagingUtils.warningDialog("Incorrect state", TaxonEditorInput.class, "Trying to open accepted taxon for a synonym or misapplication but" +
+ " no accepted taxa are present. This should not have happened.");
+ }
}
/**
- * <p>NewEmptyInstance</p>
+ * <p>NewInstance</p>
*
- * @param parentNodeUuid a {@link java.util.UUID} object.
+ * @param taxonNodeUuid a {@link java.util.UUID} object.
* @return a {@link eu.etaxonomy.taxeditor.editor.TaxonEditorInput} object.
+ * @throws java.lang.Exception if any.
*/
- public static TaxonEditorInput NewEmptyInstance(UUID parentNodeUuid){
- ConversationHolder conversation = CdmStore.createConversation();
+ public static TaxonEditorInput NewInstance(UUID taxonNodeUuid) throws Exception {
+ return new TaxonEditorInput(taxonNodeUuid, CdmType.TAXON_NODE);
- TaxonNameBase<?, ?> name = PreferencesUtil.getPreferredNomenclaturalCode().getNewTaxonNameInstance(null);
- ITaxonTreeNode parentNode = CdmStore.getService(IClassificationService.class).getTreeNodeByUuid(parentNodeUuid);
+ }
- Taxon newTaxon = Taxon.NewInstance(name, parentNode.getReference());
- TaxonNode newTaxonNode = parentNode.addChildTaxon(newTaxon, parentNode.getReference(), parentNode.getMicroReference());
+ /**
+ * <p>NewInstanceFromTaxonBase</p>
+ *
+ * @param taxonBaseUuid a {@link java.util.UUID} object.
+ * @return a {@link eu.etaxonomy.taxeditor.editor.TaxonEditorInput} object.
+ */
+ public static TaxonEditorInput NewInstanceFromTaxonBase(UUID taxonBaseUuid){
+ return new TaxonEditorInput(taxonBaseUuid, CdmType.TAXON_BASE);
+ }
- // add the new taxon to the editors persistence context
- UUID newTaxonNodeUuid = CdmStore.getService(ITaxonNodeService.class).save(newTaxonNode).getUuid();
- return new TaxonEditorInput(newTaxonNode, conversation);
+ /**
+ * <p>NewEmptyInstance</p>
+ *
+ * @param parentNodeUuid a {@link java.util.UUID} object.
+ * @return a {@link eu.etaxonomy.taxeditor.editor.TaxonEditorInput} object.
+ */
+ public static TaxonEditorInput NewEmptyInstance(UUID parentNodeUuid){
+ return new TaxonEditorInput(parentNodeUuid, CdmType.PARENT_TAXON_NODE);
}
- /* (non-Javadoc)
- * @see org.eclipse.ui.IEditorInput#exists()
- */
- /**
- *
- * @return a boolean.
- */
- @Override
+ /* (non-Javadoc)
+ * @see org.eclipse.ui.IEditorInput#exists()
+ */
+ /**
+ * <p>exists</p>
+ *
+ * @return a boolean.
+ */
+ @Override
public boolean exists() {
- return taxonNode != null;
- }
-
- /* (non-Javadoc)
- * @see org.eclipse.ui.IEditorInput#getImageDescriptor()
- */
- /**
-
* <p>getImageDescriptor</p>
- *
- * @return a {@link org.eclipse.jface.resource.ImageDescriptor} object.
- */
- @Override
+ return taxonNode != null;
+ }
+
+ /* (non-Javadoc)
+ * @see org.eclipse.ui.IEditorInput#getImageDescriptor()
+ */
+ /**
+ * <p>getImageDescriptor</p>
+ *
+ * @return a {@link org.eclipse.jface.resource.ImageDescriptor} object.
+ */
+ @Override
public ImageDescriptor getImageDescriptor() {
- return null;
- }
-
- /* (non-Javadoc)
- * @see org.eclipse.ui.IEditorInput#getName()
- */
- /**
- *
- * @return a {@link java.lang.String} object.
- */
- @Override
+ return null;
+ }
+
+ /* (non-Javadoc)
+ * @see org.eclipse.ui.IEditorInput#getName()
+ */
+ /**
+ * <p>getName</p>
+ *
+ * @return a {@link java.lang.String} object.
+ */
+ @Override
public String getName() {
- if(getTaxon() == null){
- return null;
- }
- TaxonNameBase<?, ?> name = getTaxon().getName();
- if (name == null || name.getTitleCache() == null) {
- return "New taxon";
- } else {
- return name.getTitleCache();
- }
- }
-
- /* (non-Javadoc)
- * @see org.eclipse.ui.IEditorInput#getPersistable()
- */
- /**
-
* <p>getPersistable</p>
- *
- * @return a {@link org.eclipse.ui.IPersistableElement} object.
- */
- @Override
+ if(getTaxon() == null){
+ return null;
+ }
+ TaxonNameBase<?, ?> name = getTaxon().getName();
+ if (name == null || name.getTitleCache() == null) {
+ return "New taxon";
+ } else {
+ return name.getTitleCache();
+ }
+ }
+
+ /* (non-Javadoc)
+ * @see org.eclipse.ui.IEditorInput#getPersistable()
+ */
+ /**
+ * <p>getPersistable</p>
+ *
+ * @return a {@link org.eclipse.ui.IPersistableElement} object.
+ */
+ @Override
public IPersistableElement getPersistable() {
-// if(CdmStore.isActive()){
-// TaxonNode test = CdmStore.getTaxonTreeService().getTaxonNodeByUuid(taxonNode.getUuid());
-// boolean isPersistable = CdmStore.getTaxonTreeService().getTaxonNodeByUuid(taxonNode.getUuid()) != null;
-// if (isPersistable) {
-// return this;
-// }
-// }
- return null;
- }
-
- /* (non-Javadoc)
- * @see org.eclipse.ui.IEditorInput#getToolTipText()
- */
- /**
-
* <p>getToolTipText</p>
- *
- * @return a {@link java.lang.String} object.
- */
- @Override
+ // if(CdmStore.isActive()){
+ // TaxonNode test = CdmStore.getTaxonTreeService().getTaxonNodeByUuid(taxonNode.getUuid());
+ // boolean isPersistable = CdmStore.getTaxonTreeService().getTaxonNodeByUuid(taxonNode.getUuid()) != null;
+ // if (isPersistable) {
+ // return this;
+ // }
+ // }
+ return null;
+ }
+
+ /* (non-Javadoc)
+ * @see org.eclipse.ui.IEditorInput#getToolTipText()
+ */
+ /**
+ * <p>getToolTipText</p>
+ *
+ * @return a {@link java.lang.String} object.
+ */
+ @Override
public String getToolTipText() {
- return getName();
- }
-
- /* (non-Javadoc)
- * @see org.eclipse.core.runtime.IAdaptable#getAdapter(java.lang.Class)
- */
- /** {@inheritDoc} */
- @Override
+ return getName();
+ }
+
+ /* (non-Javadoc)
+ * @see org.eclipse.core.runtime.IAdaptable#getAdapter(java.lang.Class)
+ */
+ /** {@inheritDoc} */
+ @Override
public Object getAdapter(Class adapter) {
- if (adapter == Taxon.class) {
- return taxonNode.getTaxon();
- }
+ if (adapter == Taxon.class) {
+ return getTaxon();
+ }
- if (adapter == TaxonNode.class) {
- return taxonNode;
- }
+ if (adapter == TaxonNode.class) {
+ return taxonNode;
+ }
- return null;
- }
+ return null;
+ }
- /**
- * {@inheritDoc}
- *
- * Overrides equals to ensure that a taxon can only be edited by
- * one editor at a time.
- */
- @Override
+ /**
+ * {@inheritDoc}
+ *
+ * Overrides equals to ensure that a taxon can only be edited by
+ * one editor at a time.
+ */
+ @Override
public boolean equals(Object obj) {
- if (TaxonEditorInput.class.equals(obj.getClass())
- && getTaxon() != null
- && getTaxon().equals(((TaxonEditorInput) obj).getTaxon())){
- if(((TaxonEditorInput) obj).getInitiallySelectedTaxonBase() != null){
- setInitiallySelectedTaxonBase(((TaxonEditorInput) obj).getInitiallySelectedTaxonBase());
- }
- return true;
- }
- return false;
- }
-
- /**
- * <p>getTaxon</p>
- *
- * @return the taxon
- */
- public Taxon getTaxon(){
- return taxonNode.getTaxon();
- }
-
- /**
- * <p>Getter for the field <code>taxonNode</code>.</p>
- *
- * @return the taxonNode
- */
- public TaxonNode getTaxonNode() {
- return taxonNode;
- }
-
- /*
- * (non-Javadoc)
- * @see eu.etaxonomy.cdm.api.conversation.IConversationEnabled#getConversationHolder()
- */
- /**
- * <p>getConversationHolder</p>
- *
- * @return a {@link eu.etaxonomy.cdm.api.conversation.ConversationHolder} object.
- */
- @Override
+ if (TaxonEditorInput.class.equals(obj.getClass())
+ && getTaxon() != null
+ && getTaxon().equals(((TaxonEditorInput) obj).getTaxon())){
+ if(((TaxonEditorInput) obj).getInitiallySelectedTaxonBase() != null){
+ setInitiallySelectedTaxonBase(((TaxonEditorInput) obj).getInitiallySelectedTaxonBase());
+ }
+ return true;
+ }
+ return false;
+ }
+
+ /**
+ * <p>getTaxon</p>
+ *
+ * @return the taxon
+ */
+ public Taxon getTaxon(){
+ Taxon taxon = CdmBase.deproxy(taxonNode.getTaxon(), Taxon.class);
+ return taxon;
+ }
+
+ /**
+ * <p>Getter for the field <code>taxonNode</code>.</p>
+ *
+ * @return the taxonNode
+ */
+ public TaxonNode getTaxonNode() {
+ return taxonNode;
+ }
+
+ /*
+ * (non-Javadoc)
+ * @see eu.etaxonomy.cdm.api.conversation.IConversationEnabled#getConversationHolder()
+ */
+ /**
+ * <p>getConversationHolder</p>
+ *
+ * @return a {@link eu.etaxonomy.cdm.api.conversation.ConversationHolder} object.
+ */
+ @Override
public ConversationHolder getConversationHolder() {
- return conversation;
- }
-
- /*
- * (non-Javadoc)
- * @see eu.etaxonomy.cdm.persistence.hibernate.ICdmPostCrudObserver#update(eu.etaxonomy.cdm.persistence.hibernate.CdmCrudEvent)
- */
- /** {@inheritDoc} */
- @Override
+ return conversation;
+ }
+
+ /*
+ * (non-Javadoc)
+ * @see eu.etaxonomy.cdm.persistence.hibernate.ICdmPostCrudObserver#update(eu.etaxonomy.cdm.persistence.hibernate.CdmCrudEvent)
+ */
+ /** {@inheritDoc} */
+ @Override
public void update(CdmDataChangeMap events) {
- if(dataChangeBehavior == null){
- dataChangeBehavior = new TaxonEditorInputDataChangeBehaviour(this);
- }
-
- DataChangeBridge.handleDataChange(events, dataChangeBehavior);
- }
-
- /* (non-Javadoc)
- * @see org.eclipse.ui.IPersistableElement#getFactoryId()
- */
- /**
- *
- * @return a {@link java.lang.String} object.
- */
- @Override
+ if(dataChangeBehavior == null){
+ dataChangeBehavior = new TaxonEditorInputDataChangeBehaviour(this);
+ }
+
+ DataChangeBridge.handleDataChange(events, dataChangeBehavior);
+ }
+
+ /* (non-Javadoc)
+ * @see org.eclipse.ui.IPersistableElement#getFactoryId()
+ */
+ /**
+ * <p>getFactoryId</p>
+ *
+ * @return a {@link java.lang.String} object.
+ */
+ @Override
public String getFactoryId() {
- return TaxonEditorInputFactory.getFactoryId();
- }
-
- /* (non-Javadoc)
- * @see org.eclipse.ui.IPersistable#saveState(org.eclipse.ui.IMemento)
- */
- /** {@inheritDoc} */
- @Override
+ return TaxonEditorInputFactory.getFactoryId();
+ }
+
+ /* (non-Javadoc)
+ * @see org.eclipse.ui.IPersistable#saveState(org.eclipse.ui.IMemento)
+ */
+ /** {@inheritDoc} */
+ @Override
public void saveState(IMemento memento) {
- TaxonEditorInputFactory.saveState(memento, this);
- }
+ TaxonEditorInputFactory.saveState(memento, this);
+ }
/**
* @param taxonBase a {@link eu.etaxonomy.cdm.model.taxon.TaxonBase} object.
*/
public void setInitiallySelectedTaxonBase(TaxonBase taxonBase) {
- this.initiallySelectedTaxonBase = taxonBase;
- }
-
- /**
- * <p>Getter for the field <code>initiallySelectedTaxonBase</code>.</p>
- *
- * @return a {@link eu.etaxonomy.cdm.model.taxon.TaxonBase} object.
- */
- public TaxonBase getInitiallySelectedTaxonBase() {
- return initiallySelectedTaxonBase;
- }
-
- @Override
- public String toString() {
- return String.format("%s[%s]", this.getClass().getSimpleName(), getTaxon());
- }
+ this.initiallySelectedTaxonBase = taxonBase;
+ }
+
+ /**
+ * <p>Getter for the field <code>initiallySelectedTaxonBase</code>.</p>
+ *
+ * @return a {@link eu.etaxonomy.cdm.model.taxon.TaxonBase} object.
+ */
+ public TaxonBase getInitiallySelectedTaxonBase() {
+ return initiallySelectedTaxonBase;
+ }
+
+// @Override
+// public String toString() {
+// return String.format("%s[%s]", this.getClass().getSimpleName(), getTaxon());
+// }
+
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled#getRootEntities()
+ */
+ @Override
+ public List<TaxonNode> getRootEntities() {
+ return Arrays.asList(taxonNode);
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.editor.CdmEntitySessionInput#merge()
+ */
+ @Override
+ public void merge() {
+ CdmStore.getService(ITaxonNodeService.class).merge(taxonNode);
+ }
+
+ @Override
+ public Map<Object, List<String>> getPropertyPathsMap() {
+ return null;
+ }
+
+ private List<String> getTaxonNodePropertyPaths() {
+ List<String> taxonNodePropertyPaths = new ArrayList<String>();
+ for(String propertyPath : getTaxonBasePropertyPaths()) {
+ taxonNodePropertyPaths.add("taxon." + propertyPath);
+ }
+ return taxonNodePropertyPaths;
+ }
+
+ private List<String> getTaxonBasePropertyPaths() {
+ List<String> taxonBasePropertyPaths = Arrays.asList(new String[] {
+ "sec",
+ "createdBy",
+ "updatedBy",
+ "annotations",
+ "markers",
+ "credits",
+ "extensions",
+ "rights",
+ "sources",
+ "descriptions",
+ "relationsToThisTaxon",
+ "relationsFromThisTaxon",
+ "taxonNodes",
+ "descriptions.descriptionElements.feature",
+ "descriptions.descriptionElements.area",
+ "descriptions.descriptionElements.status",
+ "descriptions.markers",
+ "name.descriptions",
+ "name.typeDesignations",
+ "name.status",
+ "name.nomenclaturalReference.inReference",
+ "name.taxonBases.taxonNodes",
+ "name.relationsFromThisName",
+ "name.relationsToThisName",
+ "name.homotypicalGroup.typifiedNames.taxonBases.synonymRelations.synonym.name.status",
+ "name.homotypicalGroup.typifiedNames.relationsToThisName.fromName",
+ "synonymRelations.synonym.name.status.type",
+ "synonymRelations.synonym.name.relationsToThisName.fromName",
+ "synonymRelations.synonym.name.nomenclaturalReference.inReference.authorship",
+ "synonymRelations.synonym.name.nomenclaturalReference.authorship",
+ "synonymRelations.synonym.name.homotypicalGroup.typifiedNames.taxonBases.synonymRelations"
+ });
+
+ return taxonBasePropertyPaths;
+ }
+
}
@Override
public void setFocus() {
PlatformUI.getWorkbench().getActiveWorkbenchWindow().getShell().setFocus();
+ ((CdmAuthorityEditorInput) getEditorInput()).bind();
}
/* (non-Javadoc)
try {
monitor.beginTask("Saving CDM Authority Editor", 1);
getConversationHolder().commit(true);
+ ((CdmAuthorityEditorInput) getEditorInput()).merge();
dirty = false;
firePropertyChange(PROP_DIRTY);
monitor.worked(1);
public void dispose() {
conversation.unregisterForDataStoreChanges(this);
conversation.close();
+ ((CdmAuthorityEditorInput) getEditorInput()).getCdmEntitySession().dispose();
super.dispose();
}
}
/**
* Copyright (C) 2007 EDIT
-* European Distributed Institute of Taxonomy
+* European Distributed Institute of Taxonomy
* http://www.e-taxonomy.eu
-*
+*
* The contents of this file are subject to the Mozilla Public License Version 1.1
* See LICENSE.TXT at the top of this package for the full license terms.
*/
package eu.etaxonomy.taxeditor.editor.group.authority;
+import java.util.Arrays;
+import java.util.Collection;
import java.util.UUID;
import org.eclipse.jface.resource.ImageDescriptor;
import org.eclipse.ui.IEditorInput;
import org.eclipse.ui.IPersistableElement;
+import eu.etaxonomy.cdm.api.application.CdmApplicationState;
import eu.etaxonomy.cdm.api.conversation.ConversationHolder;
import eu.etaxonomy.cdm.api.conversation.IConversationEnabled;
import eu.etaxonomy.cdm.api.service.IGroupService;
import eu.etaxonomy.cdm.model.common.Group;
import eu.etaxonomy.cdm.persistence.hibernate.CdmDataChangeMap;
+import eu.etaxonomy.taxeditor.editor.CdmEntitySessionInput;
import eu.etaxonomy.taxeditor.store.CdmStore;
/**
* Editor input for the {@link CdmAuthorityEditor}.
- *
+ *
* @author cmathew
* @created Mar 28, 2013
*
*/
-public class CdmAuthorityEditorInput implements IEditorInput, IConversationEnabled {
+public class CdmAuthorityEditorInput extends CdmEntitySessionInput implements IEditorInput, IConversationEnabled {
private ConversationHolder conversation;
private Group group;
-
+
protected CdmAuthorityEditorInput(ConversationHolder conversation, Group group) {
+ super(true);
this.conversation = conversation;
- this.group = group;
-
+ this.group = CdmApplicationState.getCurrentAppConfig().getGroupService().load(group.getUuid());
+
}
-
+
/**
* Creates a new instance of the input for a given group.
- *
+ *
* @param groupUuid
* @return
* @throws Exception
*/
public static CdmAuthorityEditorInput NewInstance(UUID groupUuid) throws Exception{
ConversationHolder conversation = CdmStore.createConversation();
- Group group = CdmStore.getService(IGroupService.class).load(groupUuid, null);
+ Group group = CdmStore.getService(IGroupService.class).load(groupUuid, null);
return new CdmAuthorityEditorInput(conversation, group);
}
-
+
/* (non-Javadoc)
* @see org.eclipse.core.runtime.IAdaptable#getAdapter(java.lang.Class)
*/
public Object getAdapter(Class adapter) {
if (adapter == Group.class) {
return this.group;
- }
-
+ }
+
return null;
}
/* (non-Javadoc)
@Override
public void update(CdmDataChangeMap changeEvents) {
// TODO Auto-generated method stub
-
+
}
/* (non-Javadoc)
* @see eu.etaxonomy.cdm.api.conversation.IConversationEnabled#getConversationHolder()
@Override
public String getToolTipText() {
return getName();
- }
-
+ }
+
/* (non-Javadoc)
* @see java.lang.Object#equals(java.lang.Object)
*/
}
return super.equals(object);
}
-
+
/**
* Getter method for group member.
- *
+ *
* @return
*/
public Group getGroup() {
return this.group;
}
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled#getRootEntities()
+ */
+ @Override
+ public Collection<Group> getRootEntities() {
+ return Arrays.asList(group);
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.editor.CdmEntitySessionInput#merge()
+ */
+ @Override
+ public void merge() {
+ group = CdmStore.getService(IGroupService.class).merge(group);
+ }
}
public class OpenDerivateViewHandler extends AbstractHandler {
- /* (non-Javadoc)
- * @see org.eclipse.core.commands.IHandler#execute(org.eclipse.core.commands.ExecutionEvent)
- */
@Override
public Object execute(ExecutionEvent event) throws ExecutionException {
- ISelection currentSelection = HandlerUtil.getCurrentSelection(event);
- if(currentSelection instanceof IStructuredSelection){
- Iterator<?> selectionIterator = ((IStructuredSelection) currentSelection).iterator();
- Set<UUID> selectedElementUUIDs = new HashSet<UUID>();
- while(selectionIterator.hasNext()){
- Object object = selectionIterator.next();
- if(object instanceof SpecimenOrObservationBase<?>){
- selectedElementUUIDs.add(((SpecimenOrObservationBase<?>) object).getUuid());
- }
- else if(object instanceof IndividualsAssociation){
- SpecimenOrObservationBase specimen = ((IndividualsAssociation) object).getAssociatedSpecimenOrObservation();
- if(specimen!=null){
- selectedElementUUIDs.add(specimen.getUuid());
+ Set<UUID> selectedElementUUIDs = new HashSet<UUID>();
+ Object parameter;
+ //check if parameter is set
+ try {
+ parameter = event.getObjectParameterForExecution("eu.etaxonomy.taxeditor.specimenUuidParameter");
+ } catch (ExecutionException e) {
+ parameter = null;
+ }
+ if(parameter instanceof UUID){
+ selectedElementUUIDs.add((UUID) parameter);
+ }
+ else{
+ //if not, try with current selection
+ ISelection currentSelection = HandlerUtil.getCurrentSelection(event);
+ if(currentSelection instanceof IStructuredSelection){
+ Iterator<?> selectionIterator = ((IStructuredSelection) currentSelection).iterator();
+ while(selectionIterator.hasNext()){
+ Object object = selectionIterator.next();
+ if(object instanceof SpecimenOrObservationBase<?>){
+ selectedElementUUIDs.add(((SpecimenOrObservationBase<?>) object).getUuid());
+ }
+ else if(object instanceof IndividualsAssociation){
+ SpecimenOrObservationBase specimen = ((IndividualsAssociation) object).getAssociatedSpecimenOrObservation();
+ if(specimen!=null){
+ selectedElementUUIDs.add(specimen.getUuid());
+ }
}
}
}
- if(!selectedElementUUIDs.isEmpty()){
- DerivateViewEditorInput input = new DerivateViewEditorInput(selectedElementUUIDs);
- try {
- EditorUtil.open(input);
- } catch (PartInitException e) {
- MessagingUtils.error(OpenDerivateViewHandler.class, "Could not open Derivative Editor", e);
- } catch (NullPointerException npe){
- MessagingUtils.messageDialog("Failed to open Editor", OpenDerivateViewHandler.class, "Could not open Derivative Editor. The derivate hierarchy is corrupted!", npe);
- }
- }
- else{
- MessagingUtils.informationDialog("Empty selection", "No Specimen selected.");
+ }
+ if(!selectedElementUUIDs.isEmpty()){
+ DerivateViewEditorInput input = new DerivateViewEditorInput(selectedElementUUIDs);
+ try {
+ EditorUtil.open(input);
+ } catch (PartInitException e) {
+ MessagingUtils.error(OpenDerivateViewHandler.class, "Could not open Derivative Editor", e);
+ } catch (NullPointerException npe){
+ MessagingUtils.messageDialog("Failed to open Editor", OpenDerivateViewHandler.class, "Could not open Derivative Editor. The derivate hierarchy is corrupted!", npe);
}
}
+ else{
+ MessagingUtils.informationDialog("Empty selection", "No Specimen selected.");
+ }
return null;
}
package eu.etaxonomy.taxeditor.editor.handler.create;
-import java.util.Collections;
-
import org.apache.log4j.Logger;
import org.eclipse.core.commands.AbstractHandler;
import org.eclipse.core.commands.ExecutionEvent;
import org.eclipse.core.commands.ExecutionException;
-import org.eclipse.ui.PartInitException;
+import org.eclipse.jface.wizard.WizardDialog;
+import org.eclipse.ui.handlers.HandlerUtil;
-import eu.etaxonomy.cdm.api.conversation.ConversationHolder;
-import eu.etaxonomy.cdm.api.facade.DerivedUnitFacadeCacheStrategy;
-import eu.etaxonomy.cdm.api.facade.DerivedUnitFacadeFieldUnitCacheStrategy;
-import eu.etaxonomy.cdm.api.service.IOccurrenceService;
-import eu.etaxonomy.cdm.model.occurrence.DerivationEvent;
-import eu.etaxonomy.cdm.model.occurrence.DerivationEventType;
-import eu.etaxonomy.cdm.model.occurrence.DerivedUnit;
-import eu.etaxonomy.cdm.model.occurrence.FieldUnit;
-import eu.etaxonomy.cdm.model.occurrence.SpecimenOrObservationType;
-import eu.etaxonomy.taxeditor.editor.EditorUtil;
-import eu.etaxonomy.taxeditor.editor.view.derivate.DerivateViewEditorInput;
-import eu.etaxonomy.taxeditor.store.CdmStore;
+import eu.etaxonomy.taxeditor.newWizard.NewDerivedUnitBaseWizard;
/**
- * <p>NewSpecimenHandler class.</p>
- *
* @author n.hoffmann
* @created Jun 16, 2010
* @version 1.0
private static final Logger logger = Logger
.getLogger(NewSpecimenHandler.class);
- /* (non-Javadoc)
- * @see org.eclipse.core.commands.IHandler#execute(org.eclipse.core.commands.ExecutionEvent)
- */
/** {@inheritDoc} */
@Override
public Object execute(ExecutionEvent event) throws ExecutionException {
- ConversationHolder conversation = CdmStore.createConversation();
- conversation.bind();
- FieldUnit fieldUnit = FieldUnit.NewInstance();
- DerivedUnit derivedUnit = DerivedUnit.NewInstance(SpecimenOrObservationType.PreservedSpecimen);
- DerivationEvent.NewSimpleInstance(fieldUnit, derivedUnit, DerivationEventType.GATHERING_IN_SITU());
- fieldUnit.setCacheStrategy(new DerivedUnitFacadeFieldUnitCacheStrategy());
- derivedUnit.setCacheStrategy(new DerivedUnitFacadeCacheStrategy());
- CdmStore.getService(IOccurrenceService.class).save(fieldUnit);
- CdmStore.getService(IOccurrenceService.class).save(derivedUnit);
- conversation.commit();
- DerivateViewEditorInput input = new DerivateViewEditorInput(Collections.singleton(fieldUnit.getUuid()));
- try {
- EditorUtil.open(input);
- } catch (PartInitException e) {
- // TODO Auto-generated catch block
- e.printStackTrace();
- }
-// NewDerivedUnitBaseWizard wizard = new NewDerivedUnitBaseWizard();
-// wizard.init(null, null);
-// WizardDialog dialog = new WizardDialog(HandlerUtil.getActiveShell(event), wizard);
-// dialog.open();
+
+ //TODO: we need to discuss how specimens should be created and handled #5244
+// ConversationHolder conversation = CdmStore.createConversation();
+// conversation.bind();
+// FieldUnit fieldUnit = FieldUnit.NewInstance();
+// DerivedUnit derivedUnit = DerivedUnit.NewInstance(SpecimenOrObservationType.PreservedSpecimen);
+// DerivationEvent.NewSimpleInstance(fieldUnit, derivedUnit, DerivationEventType.GATHERING_IN_SITU());
+// fieldUnit.setCacheStrategy(new DerivedUnitFacadeFieldUnitCacheStrategy());
+// derivedUnit.setCacheStrategy(new DerivedUnitFacadeCacheStrategy());
+// CdmStore.getService(IOccurrenceService.class).save(fieldUnit);
+// CdmStore.getService(IOccurrenceService.class).save(derivedUnit);
+// conversation.commit();
+// DerivateViewEditorInput input = new DerivateViewEditorInput(Collections.singleton(fieldUnit.getUuid()));
+// try {
+// EditorUtil.open(input);
+// } catch (PartInitException e) {
+// // TODO Auto-generated catch block
+// e.printStackTrace();
+// }
+ NewDerivedUnitBaseWizard wizard = new NewDerivedUnitBaseWizard();
+ wizard.init(null, null);
+ WizardDialog dialog = new WizardDialog(HandlerUtil.getActiveShell(event), wizard);
+ dialog.open();
return null;
}
}
/**
- *
+ *
*/
package eu.etaxonomy.taxeditor.editor.key;
import eu.etaxonomy.cdm.api.conversation.IConversationEnabled;
import eu.etaxonomy.cdm.model.description.IIdentificationKey;
import eu.etaxonomy.cdm.persistence.hibernate.CdmDataChangeMap;
+import eu.etaxonomy.taxeditor.editor.CdmEntitySessionInput;
/**
* @author n.hoffmann
- *
+ *
*/
public abstract class AbstractIdentificationEditorInput<T extends IIdentificationKey>
- implements IEditorInput, IConversationEnabled {
+ extends CdmEntitySessionInput implements IEditorInput, IConversationEnabled {
private final ConversationHolder conversation;
protected AbstractIdentificationEditorInput(ConversationHolder conversation) {
+ super(true);
this.conversation = conversation;
}
/*
* (non-Javadoc)
- *
+ *
* @see org.eclipse.core.runtime.IAdaptable#getAdapter(java.lang.Class)
*/
@Override
/*
* (non-Javadoc)
- *
+ *
* @see org.eclipse.ui.IEditorInput#exists()
*/
@Override
/*
* (non-Javadoc)
- *
+ *
* @see org.eclipse.ui.IEditorInput#getImageDescriptor()
*/
@Override
/*
* (non-Javadoc)
- *
+ *
* @see org.eclipse.ui.IEditorInput#getPersistable()
*/
@Override
/*
* (non-Javadoc)
- *
+ *
* @see org.eclipse.ui.IEditorInput#getToolTipText()
*/
@Override
/*
* (non-Javadoc)
- *
+ *
* @see org.eclipse.ui.IEditorInput#getName()
*/
@Override
@Override
public void update(CdmDataChangeMap changeEvents) {
}
-
+
/* (non-Javadoc)
* @see java.lang.Object#equals(java.lang.Object)
*/
package eu.etaxonomy.taxeditor.editor.key;
import org.eclipse.core.runtime.IProgressMonitor;
+import org.eclipse.ui.IEditorInput;
import org.eclipse.ui.IEditorPart;
+import org.eclipse.ui.IEditorSite;
import org.eclipse.ui.PartInitException;
import org.eclipse.ui.forms.editor.FormEditor;
+import eu.etaxonomy.cdm.api.application.CdmApplicationState;
+import eu.etaxonomy.cdm.api.application.CdmChangeEvent;
+import eu.etaxonomy.cdm.api.application.ICdmChangeListener;
import eu.etaxonomy.cdm.api.conversation.ConversationHolder;
import eu.etaxonomy.cdm.api.conversation.IConversationEnabled;
+import eu.etaxonomy.cdm.model.common.CdmBase;
import eu.etaxonomy.cdm.model.description.PolytomousKey;
import eu.etaxonomy.cdm.persistence.hibernate.CdmDataChangeMap;
+import eu.etaxonomy.taxeditor.editor.key.polytomous.PolytomousKeyEditorInput;
import eu.etaxonomy.taxeditor.editor.key.polytomous.PolytomousKeyGraphEditor;
import eu.etaxonomy.taxeditor.editor.key.polytomous.PolytomousKeyListEditor;
import eu.etaxonomy.taxeditor.model.DataChangeBridge;
* @version 1.0
*/
public class KeyEditor extends FormEditor implements IConversationEnabled,
- IDirtyMarkable, IPartContentHasDetails {
+ IDirtyMarkable, IPartContentHasDetails, ICdmChangeListener {
public static final String ID = "eu.etaxonomy.taxeditor.editor.key";
private KeyEditorDataChangeBehaviour dataChangeBehavior;
+ private PolytomousKeyEditorInput polytomousKeyEditorInput;
+
+ /*
+ * (non-Javadoc)
+ *
+ * @see org.eclipse.ui.part.EditorPart#init(org.eclipse.ui.IEditorSite,
+ * org.eclipse.ui.IEditorInput)
+ */
+ @Override
+ public void init(IEditorSite site, IEditorInput input)
+ throws PartInitException {
+ polytomousKeyEditorInput = (PolytomousKeyEditorInput)input;
+ CdmApplicationState.getCurrentDataChangeService().register(this);
+ super.init(site, input);
+ }
+
/*
* (non-Javadoc)
*
monitor.beginTask("Saving Editor", 1);
getConversationHolder().bind();
getConversationHolder().commit(true);
+ polytomousKeyEditorInput.merge();
setDirty(false);
monitor.worked(1);
} finally {
public void setFocus() {
getConversationHolder().commit(true);
getConversationHolder().bind();
+ polytomousKeyEditorInput.bind();
super.setFocus();
}
/*
public void dispose() {
conversation.unregisterForDataStoreChanges(this);
conversation.close();
+ polytomousKeyEditorInput.dispose();
+ CdmApplicationState.getCurrentDataChangeService().unregister(this);
super.dispose();
}
*/
@Override
protected void addPages() {
- AbstractIdentificationEditorInput input = (AbstractIdentificationEditorInput) getEditorInput();
- conversation = input.getConversationHolder();
+ conversation = polytomousKeyEditorInput.getConversationHolder();
conversation.registerForDataStoreChanges(this);
try {
- addPage(0, new PolytomousKeyListEditor(this), input);
+ addPage(0, new PolytomousKeyListEditor(this), polytomousKeyEditorInput);
setPageText(0, "List");
- addPage(1, new PolytomousKeyGraphEditor(this), input);
+ addPage(1, new PolytomousKeyGraphEditor(this), polytomousKeyEditorInput);
setPageText(1, "Graph");
} catch (PartInitException e) {
MessagingUtils.error(getClass(), e);
*
*/
public void setPartName() {
- AbstractIdentificationEditorInput input = (AbstractIdentificationEditorInput) getEditorInput();
- PolytomousKey key = (PolytomousKey) input.getKey();
+ PolytomousKey key = polytomousKeyEditorInput.getKey();
setPartName(key.getTitleCache());
}
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.cdm.api.application.ICdmChangeListener#onChange(eu.etaxonomy.cdm.api.application.CdmChangeEvent)
+ */
+ @Override
+ public void onChange(CdmChangeEvent event) {
+ //editorDirtyStateChanged();
+ IEditorPart activeEditor = getActiveEditor();
+ if (activeEditor instanceof IDirtyMarkable) {
+ for(CdmBase cdmBase : event.getChangedObjects()) {
+ ((IDirtyMarkable) activeEditor).changed(cdmBase);
+ }
+ }
+ }
}
/**
- *
+ *
*/
package eu.etaxonomy.taxeditor.editor.key.polytomous;
+import java.util.Arrays;
+import java.util.List;
import java.util.UUID;
import eu.etaxonomy.cdm.api.conversation.ConversationHolder;
*/
public class PolytomousKeyEditorInput extends AbstractIdentificationEditorInput<PolytomousKey> {
- private PolytomousKey key;
-
- protected PolytomousKeyEditorInput(ConversationHolder conversation,
- PolytomousKey key) {
- super(conversation);
- this.key = key;
- }
-
-
-
- public static PolytomousKeyEditorInput NewInstance(UUID polytomousKeyUuid) throws Exception{
- try{
- ConversationHolder conversation = CdmStore.createConversation();
-
- return NewInstance(polytomousKeyUuid, conversation);
- }catch(Exception e){
- throw e;
- }
- }
-
- public static PolytomousKeyEditorInput NewInstance(UUID polytomousKeyUuid, ConversationHolder conversation) throws Exception{
- PolytomousKey polytomousKey = CdmStore.getService(IPolytomousKeyService.class).load(polytomousKeyUuid, null);
-
- return new PolytomousKeyEditorInput(conversation, polytomousKey);
- }
-
- /* (non-Javadoc)
- * @see org.eclipse.ui.IEditorInput#getName()
- */
- @Override
- public String getName() {
- return key.getTitleCache();
- }
-
- @Override
- public PolytomousKey getKey() {
- return key;
- }
-
- /* (non-Javadoc)
- * @see java.lang.Object#equals(java.lang.Object)
- */
- @Override
- public boolean equals(Object object) {
- if (object instanceof PolytomousKeyEditorInput
- && getKey() != null
- && getKey().equals(((PolytomousKeyEditorInput) object).getKey())
- ){
- return true;
- }
- return super.equals(object);
- }
+ private final String name;
+ private final UUID keyUuid;
+ private PolytomousKey key;
+
+
+ protected PolytomousKeyEditorInput(ConversationHolder conversation,
+ UUID polytomousKeyUuid) {
+ super(conversation);
+ this.keyUuid = polytomousKeyUuid;
+ this.key = CdmStore.getService(IPolytomousKeyService.class).load(polytomousKeyUuid, null);
+ this.name = key.getTitleCache();
+ }
+
+// public PolytomousKeyEditorInput(UUID polytomousKeyUuid, String name) {
+// super(CdmStore.createConversation());
+// this.keyUuid = polytomousKeyUuid;
+// this.name = name;
+// }
+
+
+ public static PolytomousKeyEditorInput NewInstance(UUID polytomousKeyUuid) throws Exception{
+ try{
+ ConversationHolder conversation = CdmStore.createConversation();
+ return new PolytomousKeyEditorInput(conversation, polytomousKeyUuid);
+ }catch(Exception e){
+ throw e;
+ }
+ }
+
+
+ /* (non-Javadoc)
+ * @see org.eclipse.ui.IEditorInput#getName()
+ */
+ @Override
+ public String getName() {
+ return name;
+ }
+
+ @Override
+ public PolytomousKey getKey() {
+ return key;
+ }
+
+ /* (non-Javadoc)
+ * @see java.lang.Object#equals(java.lang.Object)
+ */
+ @Override
+ public boolean equals(Object object) {
+ if (object instanceof PolytomousKeyEditorInput
+ && getKey() != null
+ && getKey().equals(((PolytomousKeyEditorInput) object).getKey())
+ ){
+ return true;
+ }
+ return super.equals(object);
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled#getRootEntities()
+ */
+ @Override
+ public List<PolytomousKey> getRootEntities() {
+ return Arrays.asList(key);
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.editor.CdmEntitySessionInput#merge()
+ */
+ @Override
+ public void merge() {
+ key = CdmStore.getService(IPolytomousKeyService.class).merge(key);
+ }
+
}
--- /dev/null
+// $Id$
+/**
+* Copyright (C) 2015 EDIT
+* European Distributed Institute of Taxonomy
+* http://www.e-taxonomy.eu
+*
+* The contents of this file are subject to the Mozilla Public License Version 1.1
+* See LICENSE.TXT at the top of this package for the full license terms.
+*/
+package eu.etaxonomy.taxeditor.editor.key.polytomous;
+
+/**
+ * @author cmathew
+ * @date 21 Jul 2015
+ *
+ */
+public interface PolytomousKeyEditorLabels {
+
+ public static final String CREATE_CHILD_POLYTOMOUS_KEY_NODE_LABEL = "Create Child Polytomous Key Node";
+ public static final String CREATE_SIBLING_POLYTOMOUS_KEY_NODE_LABEL = "Create Sibling Polytomous Key Node";
+
+ public static final String NO_KEY_NODE_FOR_CHILD_SELECTED_MESSAGE = "No Key Node Selected.Please right-click on a specific key node to create a new child key node.";
+ public static final String NO_KEY_NODE_FOR_SIBLING_SELECTED_MESSAGE = "No Key Node Selected.Please right-click on a specific key node to create a new sibling key node.";
+}
// $Id$
/**
* Copyright (C) 2007 EDIT
- * European Distributed Institute of Taxonomy
+ * European Distributed Institute of Taxonomy
* http://www.e-taxonomy.eu
- *
+ *
* The contents of this file are subject to the Mozilla Public License Version 1.1
* See LICENSE.TXT at the top of this package for the full license terms.
*/
import org.eclipse.jface.viewers.IStructuredContentProvider;
import org.eclipse.jface.viewers.Viewer;
-import eu.etaxonomy.cdm.model.description.PolytomousKey;
import eu.etaxonomy.cdm.model.description.PolytomousKeyNode;
/**
/*
* (non-Javadoc)
- *
+ *
* @see org.eclipse.jface.viewers.IContentProvider#dispose()
*/
@Override
/*
* (non-Javadoc)
- *
+ *
* @see
* org.eclipse.jface.viewers.IContentProvider#inputChanged(org.eclipse.jface
* .viewers.Viewer, java.lang.Object, java.lang.Object)
/*
* (non-Javadoc)
- *
+ *
* @see
* org.eclipse.jface.viewers.IStructuredContentProvider#getElements(java
* .lang.Object)
*/
@Override
public Object[] getElements(Object inputElement) {
- if (inputElement instanceof PolytomousKey) {
+ if (inputElement instanceof PolytomousKeyEditorInput) {
List<PolytomousKeyNode> result = new ArrayList<PolytomousKeyNode>();
- PolytomousKeyNode root = ((PolytomousKey) inputElement).getRoot();
+ PolytomousKeyNode root = ((PolytomousKeyEditorInput) inputElement).getKey().getRoot();
getChildrenBreadthFirst(result, root);
return result.toArray();
setPartName(key.getTitleCache());
- viewer.setInput(key);
+ viewer.setInput(getEditorInput());
}
public int getTableItemCount() {
}
public PolytomousKey getViewerInputKey() {
- return (PolytomousKey) viewer.getInput();
+ return ((PolytomousKeyEditorInput) viewer.getInput()).getKey();
}
private void createMenu() {
// register context menu
if (element instanceof PolytomousKeyNode) {
List<PolytomousKeyNode> children = ((PolytomousKeyNode) element)
.getParent().getChildren();
+ viewer.update(((PolytomousKeyNode) element)
+ .getParent(), null);
for (PolytomousKeyNode child : children) {
viewer.update(child, null);
}
- }
+ }
+ viewer.refresh();
}
/* (non-Javadoc)
--- /dev/null
+// $Id$
+/**
+ * Copyright (C) 2015 EDIT
+ * European Distributed Institute of Taxonomy
+ * http://www.e-taxonomy.eu
+ *
+ * The contents of this file are subject to the Mozilla Public License Version 1.1
+ * See LICENSE.TXT at the top of this package for the full license terms.
+ */
+package eu.etaxonomy.taxeditor.editor.key.polytomous.handler;
+
+import org.eclipse.core.commands.ExecutionEvent;
+import org.eclipse.core.commands.operations.AbstractOperation;
+import org.eclipse.core.runtime.IStatus;
+import org.eclipse.core.runtime.Status;
+import org.eclipse.jface.viewers.IStructuredSelection;
+import org.eclipse.ui.IEditorPart;
+import org.eclipse.ui.handlers.HandlerUtil;
+
+import eu.etaxonomy.cdm.model.description.PolytomousKey;
+import eu.etaxonomy.cdm.model.description.PolytomousKeyNode;
+import eu.etaxonomy.taxeditor.editor.key.KeyEditor;
+import eu.etaxonomy.taxeditor.editor.key.polytomous.IPolytomousKeyEditorPage;
+import eu.etaxonomy.taxeditor.editor.key.polytomous.PolytomousKeyEditorLabels;
+import eu.etaxonomy.taxeditor.editor.key.polytomous.PolytomousKeyListEditor;
+import eu.etaxonomy.taxeditor.editor.key.polytomous.operation.RemotingCreatePolytomousKeyNodeOperation;
+import eu.etaxonomy.taxeditor.operation.RemotingCdmHandler;
+
+/**
+ * @author cmathew
+ * @date 21 Jul 2015
+ *
+ */
+public class RemotingCreateChildPolytomousKeyNodeHandler extends RemotingCdmHandler {
+
+ private PolytomousKeyNode parentNode;
+
+ public RemotingCreateChildPolytomousKeyNodeHandler() {
+ super(PolytomousKeyEditorLabels.CREATE_CHILD_POLYTOMOUS_KEY_NODE_LABEL);
+ }
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.operation.RemotingCdmHandler#allowOperations(org.eclipse.core.commands.ExecutionEvent)
+ */
+ @Override
+ public IStatus allowOperations(ExecutionEvent event) {
+ IEditorPart editor = HandlerUtil.getActiveEditor(event);
+
+ if (editor instanceof KeyEditor) {
+ IPolytomousKeyEditorPage editorPage = (IPolytomousKeyEditorPage) ((KeyEditor) editor)
+ .getActiveEditor();
+
+ if (editorPage instanceof PolytomousKeyListEditor) {
+ PolytomousKeyListEditor klEditor = (PolytomousKeyListEditor) editorPage;
+ if(klEditor.getTableItemCount() == 0) {
+ PolytomousKey pk = klEditor.getViewerInputKey();
+ parentNode = pk.getRoot();
+
+ } else {
+ IStructuredSelection selection = (IStructuredSelection) HandlerUtil.getCurrentSelection(event);
+ if (selection.getFirstElement() instanceof PolytomousKeyNode) {
+ parentNode = (PolytomousKeyNode) selection.getFirstElement();
+ } else {
+ return new Status(IStatus.ERROR,
+ "unknown",
+ PolytomousKeyEditorLabels.NO_KEY_NODE_FOR_CHILD_SELECTED_MESSAGE);
+ }
+ }
+ }
+ }
+ return Status.OK_STATUS;
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.operation.RemotingCdmHandler#prepareOperation(org.eclipse.core.commands.ExecutionEvent)
+ */
+ @Override
+ public AbstractOperation prepareOperation(ExecutionEvent event) {
+ return new RemotingCreatePolytomousKeyNodeOperation(event.getTrigger(), false, parentNode);
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.operation.RemotingCdmHandler#onComplete()
+ */
+ @Override
+ public void onComplete() {
+ // TODO Auto-generated method stub
+
+ }
+
+}
--- /dev/null
+// $Id$
+/**
+* Copyright (C) 2015 EDIT
+* European Distributed Institute of Taxonomy
+* http://www.e-taxonomy.eu
+*
+* The contents of this file are subject to the Mozilla Public License Version 1.1
+* See LICENSE.TXT at the top of this package for the full license terms.
+*/
+package eu.etaxonomy.taxeditor.editor.key.polytomous.handler;
+
+import org.eclipse.core.commands.ExecutionEvent;
+import org.eclipse.core.commands.operations.AbstractOperation;
+import org.eclipse.core.runtime.IStatus;
+import org.eclipse.core.runtime.Status;
+import org.eclipse.jface.viewers.IStructuredSelection;
+import org.eclipse.ui.handlers.HandlerUtil;
+
+import eu.etaxonomy.cdm.model.description.PolytomousKeyNode;
+import eu.etaxonomy.taxeditor.editor.key.polytomous.PolytomousKeyEditorLabels;
+import eu.etaxonomy.taxeditor.editor.key.polytomous.operation.RemotingCreatePolytomousKeyNodeOperation;
+import eu.etaxonomy.taxeditor.operation.RemotingCdmHandler;
+
+/**
+ * @author cmathew
+ * @date 21 Jul 2015
+ *
+ */
+public class RemotingCreateSiblingPolytomousKeyNodeHandler extends RemotingCdmHandler {
+
+ private PolytomousKeyNode parentNode;
+
+ public RemotingCreateSiblingPolytomousKeyNodeHandler() {
+ super(PolytomousKeyEditorLabels.CREATE_SIBLING_POLYTOMOUS_KEY_NODE_LABEL);
+ }
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.operation.RemotingCdmHandler#allowOperations(org.eclipse.core.commands.ExecutionEvent)
+ */
+ @Override
+ public IStatus allowOperations(ExecutionEvent event) {
+
+ IStructuredSelection selection = (IStructuredSelection) HandlerUtil.getCurrentSelection(event);
+
+ if (selection.getFirstElement() instanceof PolytomousKeyNode) {
+ parentNode = (PolytomousKeyNode) selection.getFirstElement();
+ } else {
+ return new Status(IStatus.ERROR,
+ "unknown",
+ PolytomousKeyEditorLabels.NO_KEY_NODE_FOR_SIBLING_SELECTED_MESSAGE);
+ }
+
+ return Status.OK_STATUS;
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.operation.RemotingCdmHandler#prepareOperation(org.eclipse.core.commands.ExecutionEvent)
+ */
+ @Override
+ public AbstractOperation prepareOperation(ExecutionEvent event) {
+ return new RemotingCreatePolytomousKeyNodeOperation(event.getTrigger(), false, parentNode.getParent());
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.operation.RemotingCdmHandler#onComplete()
+ */
+ @Override
+ public void onComplete() {
+ // TODO Auto-generated method stub
+
+ }
+
+}
/**
- *
+ *
*/
package eu.etaxonomy.taxeditor.editor.key.polytomous.operation;
PolytomousKeyNode parentNode;
private PolytomousKeyNode childNode;
-
+
public CreateNodeOperation(String label,
IUndoContext undoContext, PolytomousKeyNode parentNode, IPostOperationEnabled postOperationEnabled) {
super(label, undoContext, postOperationEnabled);
throws ExecutionException {
childNode = PolytomousKeyNode.NewInstance();
-
+
parentNode.addChild(childNode);
return postExecute(childNode);
/**
- *
+ *
*/
package eu.etaxonomy.taxeditor.editor.key.polytomous.operation;
import org.eclipse.core.runtime.IProgressMonitor;
import org.eclipse.core.runtime.IStatus;
import org.eclipse.jface.dialogs.MessageDialog;
-import org.eclipse.ui.handlers.HandlerUtil;
import eu.etaxonomy.cdm.api.application.ICdmApplicationConfiguration;
import eu.etaxonomy.cdm.api.service.DeleteResult;
import eu.etaxonomy.cdm.api.service.IPolytomousKeyNodeService;
-import eu.etaxonomy.cdm.api.service.ITaxonService;
import eu.etaxonomy.cdm.model.description.PolytomousKeyNode;
import eu.etaxonomy.taxeditor.bulkeditor.internal.TaxeditorBulkeditorPlugin;
import eu.etaxonomy.taxeditor.model.MessagingUtils;
/**
* @author n.hoffmann
- *
+ *
*/
public class DeleteNodeOperation extends AbstractPostTaxonOperation {
/*
* (non-Javadoc)
- *
+ *
* @see
* org.eclipse.core.commands.operations.AbstractOperation#execute(org.eclipse
* .core.runtime.IProgressMonitor, org.eclipse.core.runtime.IAdaptable)
@Override
public IStatus execute(IProgressMonitor monitor, IAdaptable info)
throws ExecutionException {
-
+
//parent.removeChild(node);
ICdmApplicationConfiguration controller;
-
- controller = (ICdmApplicationConfiguration) CdmStore.getCurrentApplicationConfiguration();
-
+
+ controller = CdmStore.getCurrentApplicationConfiguration();
+
IPolytomousKeyNodeService service = controller.getPolytomousKeyNodeService();
DeleteResult result;
if (node.getChildren().size()>0){
/*
* (non-Javadoc)
- *
+ *
* @see
* org.eclipse.core.commands.operations.AbstractOperation#redo(org.eclipse
* .core.runtime.IProgressMonitor, org.eclipse.core.runtime.IAdaptable)
/*
* (non-Javadoc)
- *
+ *
* @see
* org.eclipse.core.commands.operations.AbstractOperation#undo(org.eclipse
* .core.runtime.IProgressMonitor, org.eclipse.core.runtime.IAdaptable)
--- /dev/null
+// $Id$
+/**
+* Copyright (C) 2015 EDIT
+* European Distributed Institute of Taxonomy
+* http://www.e-taxonomy.eu
+*
+* The contents of this file are subject to the Mozilla Public License Version 1.1
+* See LICENSE.TXT at the top of this package for the full license terms.
+*/
+package eu.etaxonomy.taxeditor.editor.key.polytomous.operation;
+
+import org.eclipse.core.runtime.IAdaptable;
+import org.eclipse.core.runtime.IProgressMonitor;
+
+import eu.etaxonomy.cdm.api.application.CdmApplicationState;
+import eu.etaxonomy.cdm.api.application.CdmChangeEvent.Action;
+import eu.etaxonomy.cdm.model.common.CdmBase;
+import eu.etaxonomy.cdm.model.common.LanguageString;
+import eu.etaxonomy.cdm.model.description.PolytomousKeyNode;
+import eu.etaxonomy.taxeditor.operation.RemotingCdmMergeOperation;
+import eu.etaxonomy.taxeditor.store.CdmStore;
+
+/**
+ * @author cmathew
+ * @date 21 Jul 2015
+ *
+ */
+public class RemotingCreatePolytomousKeyNodeOperation extends RemotingCdmMergeOperation {
+
+ private final PolytomousKeyNode parentNode;
+
+ private final static String LABEL = "Create new polytomous key node";
+
+ public RemotingCreatePolytomousKeyNodeOperation(Object source,
+ boolean async,
+ PolytomousKeyNode parentNode){
+ super(LABEL, Action.Create, source, async);
+ this.parentNode = parentNode;
+ }
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.operation.RemotingCdmMergeOperation#doMergeExecute(org.eclipse.core.runtime.IProgressMonitor, org.eclipse.core.runtime.IAdaptable)
+ */
+ @Override
+ protected CdmBase doMergeExecute(IProgressMonitor monitor, IAdaptable info) throws Exception {
+ PolytomousKeyNode childNode = PolytomousKeyNode.NewInstance();
+ parentNode.addChild(childNode);
+ childNode.getModifyingText().put(CdmStore.getDefaultLanguage(),LanguageString.NewInstance("",CdmStore.getDefaultLanguage()));
+ return CdmApplicationState.getCurrentAppConfig().getPolytomousKeyNodeService().merge(childNode);
+ }
+
+}
import eu.etaxonomy.cdm.api.conversation.ConversationHolder;
import eu.etaxonomy.cdm.api.conversation.IConversationEnabled;
-import eu.etaxonomy.cdm.api.service.ITaxonService;
import eu.etaxonomy.cdm.hibernate.HibernateProxyHelper;
import eu.etaxonomy.cdm.model.common.CdmBase;
import eu.etaxonomy.cdm.model.name.HomotypicalGroup;
import eu.etaxonomy.cdm.model.taxon.TaxonNode;
import eu.etaxonomy.cdm.persistence.hibernate.CdmDataChangeMap;
import eu.etaxonomy.taxeditor.editor.CdmDataTransfer;
-import eu.etaxonomy.taxeditor.editor.EditorUtil;
import eu.etaxonomy.taxeditor.editor.IDropTargetable;
import eu.etaxonomy.taxeditor.editor.IMultiPageTaxonEditorPage;
import eu.etaxonomy.taxeditor.editor.ISecuredEditor;
import eu.etaxonomy.taxeditor.model.TaxeditorPartService;
import eu.etaxonomy.taxeditor.preference.Resources;
import eu.etaxonomy.taxeditor.security.RequiredPermissions;
+import eu.etaxonomy.taxeditor.session.ICdmEntitySession;
import eu.etaxonomy.taxeditor.store.CdmStore;
-import eu.etaxonomy.taxeditor.store.StoreUtil;
/**
* <p>
private TaxonBase objectAffectedByLastOperation;
+ private ICdmEntitySession cdmEntitySession;
+
/**
* <p>
* Constructor for TaxonNameEditor.
* </p>
*/
public void createOrUpdateNameComposites() {
- //this.taxon = (Taxon)CdmStore.getService(ITaxonService.class).load(this.getTaxon().getUuid());
- //this.taxon = HibernateProxyHelper.deproxy(this.taxon, Taxon.class);
+// this.taxon = (Taxon)CdmStore.getService(ITaxonService.class).load(this.getTaxon().getUuid());
ContainerFactory.createOrUpdateAcceptedTaxonsHomotypicGroup(this);
ContainerFactory.createOrUpdateHeterotypicSynonymyGroups(this);
ContainerFactory.createOrUpdateMisapplicationsGroup(this);
}
if (input.getAdapter(Taxon.class) != null) {
- taxon = (Taxon) input.getAdapter(Taxon.class);
+ taxon = CdmBase.deproxy(input.getAdapter(Taxon.class), Taxon.class);
} else {
throw new PartInitException("Invalid Input: Taxon cannot be null");
}
Color background = AbstractUtility.getColor(enabled ? Resources.COLOR_COMPOSITE_BACKGROUND : Resources.COLOR_TEXT_DISABLED_BACKGROUND);
setEnabled(enabled, background);
}
+
+
+
}
// $Id$
/**
* Copyright (C) 2007 EDIT
-* European Distributed Institute of Taxonomy
+* European Distributed Institute of Taxonomy
* http://www.e-taxonomy.eu
-*
+*
* The contents of this file are subject to the Mozilla Public License Version 1.1
* See LICENSE.TXT at the top of this package for the full license terms.
*/
import eu.etaxonomy.taxeditor.model.MessagingUtils;
import eu.etaxonomy.taxeditor.operation.AbstractPostOperation;
import eu.etaxonomy.taxeditor.operation.IPostOperationEnabled;
+import eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled;
import eu.etaxonomy.taxeditor.ui.dialog.selection.TaxonNodeSelectionDialog;
/**
private static final Logger logger = Logger
.getLogger(ChangeSynonymToAcceptedTaxonHandler.class);
private MultiPageTaxonEditor editor;
-
+
/* (non-Javadoc)
* @see org.eclipse.core.commands.IHandler#execute(org.eclipse.core.commands.ExecutionEvent)
*/
/** {@inheritDoc} */
- public Object execute(ExecutionEvent event) throws ExecutionException {
+ @Override
+ public Object execute(ExecutionEvent event) throws ExecutionException {
editor = (MultiPageTaxonEditor) HandlerUtil.getActiveEditor(event);
Shell shell = HandlerUtil.getActiveShell(event);
IEditorInput input = editor.getEditorInput();
-
+
if (!(input instanceof TaxonEditorInput)) {
logger.error("Editor input is not TaxonEditorInput");
return null;
}
Synonym synonym = (Synonym) selection.getFirstElement();
-
+
// Force user to save taxon - not really necessary though, is it?
if (!EditorUtil.forceUserSave(editor, shell)) {
return null;
// Get taxon
Taxon taxon = ((TaxonEditorInput) input).getTaxon();
-
+
TaxonNode parentNode = (TaxonNode) HibernateProxyHelper.deproxy(((TaxonEditorInput) input).getTaxonNode().getParent());
-
+
List<UUID> excludeTaxa = null;
-
- TaxonNode newParentNode = TaxonNodeSelectionDialog.select(HandlerUtil.getActiveShell(event), editor.getConversationHolder(), "Select parent", excludeTaxa, null, null);
-
+
+ TaxonNode newParentNode = TaxonNodeSelectionDialog.select(HandlerUtil.getActiveShell(event), editor.getConversationHolder(), "Select parent", excludeTaxa, null, ((TaxonEditorInput) input).getTaxonNode().getClassification());
+
+
if(newParentNode != null){
-
+
// TODO get synonyms from homotypical group and add them as homotypic synonyms to new accepted taxon
// apply confirmation dialog
HomotypicalGroup group = synonym.getHomotypicGroup();
Set<TaxonNameBase> namesInGroup = group.getTypifiedNames();
// FIXME with this implementation we can not create a taxonNode that is a direct child of the classification node
- AbstractPostOperation operation = new ChangeSynonymToAcceptedTaxonOperation("Change synonym to accepted taxon", EditorUtil.getUndoContext(),
- taxon, newParentNode, synonym, namesInGroup, this, editor); //$NON-NLS-1$
+ AbstractPostOperation operation = new ChangeSynonymToAcceptedTaxonOperation("Change synonym to accepted taxon", EditorUtil.getUndoContext(),
+ taxon, newParentNode, synonym, namesInGroup, this, editor, (ICdmEntitySessionEnabled)editor.getEditorInput()); //$NON-NLS-1$
+
EditorUtil.executeOperation(operation);
}
-
+
return null;
}
* @see eu.etaxonomy.taxeditor.operations.IPostOperationEnabled#postOperation(eu.etaxonomy.cdm.model.common.CdmBase)
*/
/** {@inheritDoc} */
- public boolean postOperation(CdmBase objectAffectedByOperation) {
-
+ @Override
+ public boolean postOperation(CdmBase objectAffectedByOperation) {
+
// Redraw existing editor
((IPostOperationEnabled) editor).postOperation(null);
-
+
editor.doSave(EditorUtil.getMonitor());
-
+
if (objectAffectedByOperation instanceof TaxonNode) {
-
+
// Open new unsaved editor with existing taxon's parent as temporary parent
TaxonNode newNode = (TaxonNode) objectAffectedByOperation;
// TaxonNode newNode = parentNode.addChild(newTaxon);
-
+
try {
// TODO
/*
* doesn't work yet.
*/
EditorUtil.openTaxonNode(newNode.getUuid());
-
+
} catch (PartInitException e) {
// TODO Auto-generated catch block
e.printStackTrace();
*
* @return a boolean.
*/
- public boolean onComplete() {
+ @Override
+ public boolean onComplete() {
// TODO Auto-generated method stub
return false;
}
/**
* Copyright (C) 2007 EDIT
-* European Distributed Institute of Taxonomy
+* European Distributed Institute of Taxonomy
* http://www.e-taxonomy.eu
-*
+*
* The contents of this file are subject to the Mozilla Public License Version 1.1
* See LICENSE.TXT at the top of this package for the full license terms.
*/
import org.eclipse.core.commands.common.NotDefinedException;
import eu.etaxonomy.cdm.model.name.HomotypicalGroup;
-import eu.etaxonomy.cdm.model.name.TaxonNameBase;
+import eu.etaxonomy.cdm.model.name.NonViralName;
import eu.etaxonomy.cdm.model.taxon.Taxon;
import eu.etaxonomy.taxeditor.editor.EditorUtil;
import eu.etaxonomy.taxeditor.editor.Page;
* @see org.eclipse.core.commands.IHandler#execute(org.eclipse.core.commands.ExecutionEvent)
*/
/** {@inheritDoc} */
- public Object execute(ExecutionEvent event) throws ExecutionException {
+ @Override
+ public Object execute(ExecutionEvent event) throws ExecutionException {
TaxonNameEditor editor = (TaxonNameEditor) EditorUtil.getActiveEditorPage(
Page.NAME);
Taxon taxon = editor.getTaxon();
HomotypicalGroup group = taxon.getHomotypicGroup();
- TaxonNameBase newSynonymName = ParseHandler.createEmptyName();
-
+ NonViralName newSynonymName = ParseHandler.createEmptyName();
+
AbstractPostOperation operation;
try {
- operation = new CreateSynonymInExistingHomotypicalGroupOperation(event.getCommand().getName(),
+ operation = new CreateSynonymInExistingHomotypicalGroupOperation(event.getCommand().getName(),
editor.getUndoContext(), taxon, group, newSynonymName, editor);
EditorUtil.executeOperation(operation);
} catch (NotDefinedException e) {
MessagingUtils.error(getClass(), e);
}
-
+
return null;
}
// $Id$
/**
* Copyright (C) 2007 EDIT
-* European Distributed Institute of Taxonomy
+* European Distributed Institute of Taxonomy
* http://www.e-taxonomy.eu
-*
+*
* The contents of this file are subject to the Mozilla Public License Version 1.1
* See LICENSE.TXT at the top of this package for the full license terms.
*/
import org.eclipse.ui.handlers.HandlerUtil;
import eu.etaxonomy.cdm.model.name.HomotypicalGroup;
-import eu.etaxonomy.cdm.model.name.TaxonNameBase;
+import eu.etaxonomy.cdm.model.name.NonViralName;
import eu.etaxonomy.cdm.model.taxon.Synonym;
import eu.etaxonomy.taxeditor.editor.EditorUtil;
import eu.etaxonomy.taxeditor.editor.Page;
* @see org.eclipse.core.commands.IHandler#execute(org.eclipse.core.commands.ExecutionEvent)
*/
/** {@inheritDoc} */
- public Object execute(ExecutionEvent event) throws ExecutionException {
+ @Override
+ public Object execute(ExecutionEvent event) throws ExecutionException {
TaxonNameEditor editor = (TaxonNameEditor) EditorUtil.getActiveEditorPage(
Page.NAME);
ISelection menuSelection = HandlerUtil.getCurrentSelection(event);
-
+
Object selecteObject = ((StructuredSelection) menuSelection).getFirstElement();
-
+
if(! (selecteObject instanceof Synonym)){
return null;
}
-
-
+
+
Synonym synonym = (Synonym) selecteObject;
-
+
HomotypicalGroup group = synonym.getHomotypicGroup();
-
- TaxonNameBase newSynonymName = ParseHandler.createEmptyName();
-
+
+ NonViralName newSynonymName = ParseHandler.createEmptyName();
+
AbstractPostOperation operation;
-
+
try {
operation = new CreateSynonymInExistingHomotypicalGroupOperation(event.getCommand().getName(), editor.getUndoContext(),
editor.getTaxon(), group, newSynonymName, editor);
} catch (NotDefinedException e) {
logger.warn("Command name not set");
}
-
+
return null;
}
}
import eu.etaxonomy.taxeditor.model.MessagingUtils;
import eu.etaxonomy.taxeditor.operation.AbstractPostOperation;
import eu.etaxonomy.taxeditor.operation.IPostOperationEnabled;
+import eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled;
/**
* <p>DeleteTaxonBaseHandler class.</p>
IWorkbenchPage activePage = HandlerUtil.getActiveWorkbenchWindow(event).getActivePage();
- operation = new DeleteTaxonOperation(commandName, editor.getUndoContext(),(Taxon) selectedElement, new TaxonDeletionConfigurator(), null, activePage, this, editor);
+ operation = new DeleteTaxonOperation(commandName,
+ editor.getUndoContext(),
+ (Taxon) selectedElement,
+ new TaxonDeletionConfigurator(),
+ null,
+ activePage,
+ this,
+ editor,
+ (ICdmEntitySessionEnabled)editor.getEditorInput());
//editor.dispose();
}
-package eu.etaxonomy.taxeditor.editor.name.handler;\r
-\r
-import java.util.UUID;\r
-\r
-import org.apache.log4j.Logger;\r
-import org.eclipse.core.commands.AbstractHandler;\r
-import org.eclipse.core.commands.ExecutionEvent;\r
-import org.eclipse.core.commands.ExecutionException;\r
-import org.eclipse.core.commands.common.NotDefinedException;\r
-import org.eclipse.core.commands.operations.IUndoContext;\r
-import org.eclipse.jface.dialogs.MessageDialog;\r
-import org.eclipse.jface.viewers.StructuredSelection;\r
-import org.eclipse.swt.widgets.Shell;\r
-import org.eclipse.ui.IEditorInput;\r
-import org.eclipse.ui.handlers.HandlerUtil;\r
-\r
-import eu.etaxonomy.cdm.model.common.CdmBase;\r
-import eu.etaxonomy.cdm.model.name.TaxonNameBase;\r
-import eu.etaxonomy.cdm.model.taxon.Synonym;\r
-import eu.etaxonomy.cdm.model.taxon.Taxon;\r
-import eu.etaxonomy.cdm.model.taxon.TaxonNode;\r
-import eu.etaxonomy.taxeditor.editor.EditorUtil;\r
-import eu.etaxonomy.taxeditor.editor.MultiPageTaxonEditor;\r
-import eu.etaxonomy.taxeditor.editor.TaxonEditorInput;\r
-import eu.etaxonomy.taxeditor.editor.name.operation.MoveSynonymToAnotherAcceptedTaxonOperation;\r
-import eu.etaxonomy.taxeditor.operation.IPostOperationEnabled;\r
-import eu.etaxonomy.taxeditor.ui.dialog.selection.TaxonNodeSelectionDialog;\r
-\r
-public class MoveSynonymToAnotherAcceptedTaxonHandler extends AbstractHandler implements IPostOperationEnabled {\r
- private static final Logger logger = Logger\r
- .getLogger(MoveSynonymToAnotherAcceptedTaxonHandler.class);\r
- private MultiPageTaxonEditor editor;\r
- \r
- @Override\r
- public Object execute(ExecutionEvent event) throws ExecutionException {\r
- editor = (MultiPageTaxonEditor) HandlerUtil.getActiveEditor(event);\r
- Shell shell = HandlerUtil.getActiveShell(event);\r
- IEditorInput input = editor.getEditorInput();\r
- if (!EditorUtil.forceUserSave(editor, shell)) {\r
- return null;\r
- }\r
- \r
- if (!(input instanceof TaxonEditorInput)) {\r
- logger.error("Editor input is not TaxonEditorInput");\r
- return null;\r
- }\r
-\r
- // Get synonym from selection\r
- StructuredSelection selection = (StructuredSelection) HandlerUtil.getCurrentSelection(event);\r
- if (!(selection.getFirstElement() instanceof Synonym)) {\r
- logger.error("Selection does not contain a Synonym");\r
- return null;\r
- }\r
-\r
- Synonym synonym = (Synonym) selection.getFirstElement();\r
- TaxonNode newParentNode = TaxonNodeSelectionDialog.select(HandlerUtil.getActiveShell(event), editor.getConversationHolder(), "Select new accepted taxon", null, null, null);\r
- Taxon oldParent = ((TaxonEditorInput)input).getTaxon();\r
- \r
- MoveSynonymToAnotherAcceptedTaxonOperation operation = new MoveSynonymToAnotherAcceptedTaxonOperation("Change accepted Taxon of Synonym", EditorUtil.getUndoContext(),\r
- oldParent.getUuid(), synonym.getUuid(), newParentNode.getTaxon(), editor);\r
- \r
- EditorUtil.executeOperation(operation);\r
- \r
-\r
- return null;\r
- }\r
-\r
- @Override\r
- public boolean postOperation(CdmBase objectAffectedByOperation) {\r
- // TODO Auto-generated method stub\r
- return false;\r
- }\r
-\r
- @Override\r
- public boolean onComplete() {\r
- // TODO Auto-generated method stub\r
- return false;\r
- }\r
- \r
- \r
-\r
-}\r
+package eu.etaxonomy.taxeditor.editor.name.handler;
+
+import org.apache.log4j.Logger;
+import org.eclipse.core.commands.AbstractHandler;
+import org.eclipse.core.commands.ExecutionEvent;
+import org.eclipse.core.commands.ExecutionException;
+import org.eclipse.jface.viewers.StructuredSelection;
+import org.eclipse.swt.widgets.Shell;
+import org.eclipse.ui.IEditorInput;
+import org.eclipse.ui.handlers.HandlerUtil;
+
+import eu.etaxonomy.cdm.model.common.CdmBase;
+import eu.etaxonomy.cdm.model.taxon.Synonym;
+import eu.etaxonomy.cdm.model.taxon.Taxon;
+import eu.etaxonomy.cdm.model.taxon.TaxonNode;
+import eu.etaxonomy.taxeditor.editor.EditorUtil;
+import eu.etaxonomy.taxeditor.editor.MultiPageTaxonEditor;
+import eu.etaxonomy.taxeditor.editor.TaxonEditorInput;
+import eu.etaxonomy.taxeditor.editor.name.operation.MoveSynonymToAnotherAcceptedTaxonOperation;
+import eu.etaxonomy.taxeditor.model.AbstractUtility;
+import eu.etaxonomy.taxeditor.operation.IPostOperationEnabled;
+import eu.etaxonomy.taxeditor.ui.dialog.selection.TaxonNodeSelectionDialog;
+
+public class MoveSynonymToAnotherAcceptedTaxonHandler extends AbstractHandler implements IPostOperationEnabled {
+ private static final Logger logger = Logger
+ .getLogger(MoveSynonymToAnotherAcceptedTaxonHandler.class);
+ private MultiPageTaxonEditor editor;
+
+ @Override
+ public Object execute(ExecutionEvent event) throws ExecutionException {
+ editor = (MultiPageTaxonEditor) HandlerUtil.getActiveEditor(event);
+ Shell shell = HandlerUtil.getActiveShell(event);
+ IEditorInput input = editor.getEditorInput();
+ if (!EditorUtil.forceUserSave(editor, shell)) {
+ return null;
+ }
+
+ if (!(input instanceof TaxonEditorInput)) {
+ logger.error("Editor input is not TaxonEditorInput");
+ return null;
+ }
+
+ // Get synonym from selection
+ StructuredSelection selection = (StructuredSelection) HandlerUtil.getCurrentSelection(event);
+ if (!(selection.getFirstElement() instanceof Synonym)) {
+ logger.error("Selection does not contain a Synonym");
+ return null;
+ }
+
+ Synonym synonym = (Synonym) selection.getFirstElement();
+ TaxonNode newParentNode = TaxonNodeSelectionDialog.select(HandlerUtil.getActiveShell(event), editor.getConversationHolder(), "Select new accepted taxon", null, null, ((TaxonEditorInput)input).getTaxonNode().getClassification());
+ if(newParentNode!=null){
+ Taxon oldParent = ((TaxonEditorInput)input).getTaxon();
+
+ MoveSynonymToAnotherAcceptedTaxonOperation operation = new MoveSynonymToAnotherAcceptedTaxonOperation("Change accepted Taxon of Synonym", EditorUtil.getUndoContext(),
+ oldParent.getUuid(), synonym.getUuid(), newParentNode.getTaxon(), editor);
+
+ AbstractUtility.executeOperation(operation);
+
+ }
+ return null;
+ }
+
+ @Override
+ public boolean postOperation(CdmBase objectAffectedByOperation) {
+ // TODO Auto-generated method stub
+ return false;
+ }
+
+ @Override
+ public boolean onComplete() {
+ // TODO Auto-generated method stub
+ return false;
+ }
+
+
+
+}
// $Id$
/**
* Copyright (C) 2007 EDIT
-* European Distributed Institute of Taxonomy
+* European Distributed Institute of Taxonomy
* http://www.e-taxonomy.eu
-*
+*
* The contents of this file are subject to the Mozilla Public License Version 1.1
* See LICENSE.TXT at the top of this package for the full license terms.
*/
import eu.etaxonomy.taxeditor.editor.name.operation.SwapSynonymAndAcceptedOperation;
import eu.etaxonomy.taxeditor.model.MessagingUtils;
import eu.etaxonomy.taxeditor.operation.IPostOperationEnabled;
+import eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled;
/**
* <p>SwapSynonymAndAcceptedHandler class.</p>
* @see org.eclipse.core.commands.IHandler#execute(org.eclipse.core.commands.ExecutionEvent)
*/
/** {@inheritDoc} */
- public Object execute(ExecutionEvent event) throws ExecutionException {
+ @Override
+ public Object execute(ExecutionEvent event) throws ExecutionException {
editor = EditorUtil.getActiveMultiPageTaxonEditor();
Shell shell = HandlerUtil.getActiveShell(event);
Synonym synonym = (Synonym) EditorUtil.getSelection(event).getFirstElement();
-
+
// Force user to save taxon - not really necessary though, is it?
if (!EditorUtil.forceUserSave(editor, shell)) {
return null;
}
-
+
try {
- SwapSynonymAndAcceptedOperation operation = new SwapSynonymAndAcceptedOperation(event.getCommand().getName(), editor.getUndoContext(),
- editor.getTaxon(), synonym, this);
-
+ SwapSynonymAndAcceptedOperation operation = new SwapSynonymAndAcceptedOperation(event.getCommand().getName(),
+ editor.getUndoContext(),
+ editor.getTaxon(),
+ synonym,
+ this,
+ (ICdmEntitySessionEnabled)editor.getEditorInput());
+
EditorUtil.executeOperation(operation);
-
+
} catch (NotDefinedException e) {
logger.warn("Command name not set");
- }
+ }
return null;
}
public boolean postOperation(CdmBase objectAffectedByOperation) {
// Redraw existing editor
//((IPostOperationEnabled) editor).postOperation(null);
-
+
editor.doSave(EditorUtil.getMonitor());
editor.close(true);
-
+
if (objectAffectedByOperation instanceof Taxon) {
-
+
taxon = (Taxon) objectAffectedByOperation;
-
-
+
+
}
return true;
}
public boolean onComplete() {
Display display = Display.getCurrent();
display.asyncExec(new Runnable() {
- public void run() {
+ @Override
+ public void run() {
try {
EditorUtil.openTaxonBase(taxon.getUuid());
-
+
} catch (Exception e) {
MessagingUtils.warningDialog("Could not open editor for taxon", this, e.getMessage());
}
-
+
}
});
return true;
import eu.etaxonomy.cdm.api.service.exception.DataChangeNoRollbackException;
import eu.etaxonomy.cdm.model.name.HomotypicalGroup;
import eu.etaxonomy.cdm.model.name.TaxonNameBase;
+import eu.etaxonomy.cdm.model.taxon.Synonym;
import eu.etaxonomy.cdm.model.taxon.SynonymRelationship;
import eu.etaxonomy.cdm.model.taxon.Taxon;
-import eu.etaxonomy.cdm.model.taxon.Synonym;
import eu.etaxonomy.cdm.model.taxon.TaxonRelationship;
import eu.etaxonomy.cdm.model.taxon.TaxonRelationshipType;
import eu.etaxonomy.taxeditor.model.MessagingUtils;
TaxonNameBase<?, ?> synonymName = concept.getName();
Synonym synonym = null;
try {
- synonym = CdmStore.getService(ITaxonService.class).changeRelatedTaxonToSynonym(concept, element, taxonRelationship.getType(), null);
+ synonym =
+ (Synonym) CdmStore.getService(ITaxonService.class).changeRelatedTaxonToSynonym(concept.getUuid(),
+ element.getUuid(),
+ taxonRelationship.getType(),
+ null).getCdmEntity();
} catch (DataChangeNoRollbackException e) {
// TODO Auto-generated catch block
e.printStackTrace();
}
-
-
+
+
return postExecute(synonym);
}
/**
* Copyright (C) 2007 EDIT
-* European Distributed Institute of Taxonomy
+* European Distributed Institute of Taxonomy
* http://www.e-taxonomy.eu
-*
+*
* The contents of this file are subject to the Mozilla Public License Version 1.1
* See LICENSE.TXT at the top of this package for the full license terms.
*/
import org.eclipse.core.runtime.IAdaptable;
import org.eclipse.core.runtime.IProgressMonitor;
import org.eclipse.core.runtime.IStatus;
-import org.eclipse.core.runtime.Status;
import eu.etaxonomy.cdm.hibernate.HibernateProxyHelper;
-import eu.etaxonomy.cdm.model.common.CdmBase;
import eu.etaxonomy.cdm.model.name.HomotypicalGroup;
import eu.etaxonomy.cdm.model.name.TaxonNameBase;
import eu.etaxonomy.cdm.model.taxon.Taxon;
*/
public class ChangeHomotypicalGroupBasionymOperation extends
AbstractPostTaxonOperation {
- private TaxonBase taxonBase;
+ private final TaxonBase taxonBase;
/**
* <p>Constructor for ChangeHomotypicalGroupBasionymOperation.</p>
public ChangeHomotypicalGroupBasionymOperation(String text,
IUndoContext undoContext, Taxon taxon, TaxonBase taxonBase, IPostOperationEnabled postOperationEnabled) {
super(text, undoContext, taxon, postOperationEnabled);
-
+
this.taxonBase = taxonBase;
}
@Override
public IStatus execute(IProgressMonitor monitor, IAdaptable info)
throws ExecutionException {
-
+
TaxonNameBase<?, ?> name = taxonBase.getName();
-
+
monitor.worked(20);
name = HibernateProxyHelper.deproxy(name, TaxonNameBase.class);
HomotypicalGroup group = HibernateProxyHelper.deproxy(name.getHomotypicalGroup(), HomotypicalGroup.class);
TaxonNameBase oldBasionym = name.getBasionym();
-
+
name.setAsGroupsBasionym();
-
+
monitor.worked(40);
oldBasionym = HibernateProxyHelper.deproxy(oldBasionym, TaxonNameBase.class);
if (oldBasionym != null){
postExecute(oldBasionymTaxonBase);
}
}
+
return postExecute(taxonBase);
}
// TODO replace w method from cdmlib
// FIXME this is also old code: reimplement
// CdmUtil.setGroupBasionym(synonym.getName());
-
+
return postExecute(taxonBase);
}
-
-
+
+
}
import eu.etaxonomy.taxeditor.model.MessagingUtils;
import eu.etaxonomy.taxeditor.operation.AbstractPersistentPostOperation;
import eu.etaxonomy.taxeditor.operation.IPostOperationEnabled;
+import eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled;
import eu.etaxonomy.taxeditor.store.CdmStore;
/**
public class ChangeSynonymToAcceptedTaxonOperation extends AbstractPersistentPostOperation {
private Taxon newTaxon;
- private Synonym synonym;
+ private final Synonym synonym;
private final ITaxonTreeNode parentNode;
private TaxonNode newNode;
* @param postOperationEnabled a {@link eu.etaxonomy.taxeditor.operation.IPostOperationEnabled} object.
* @param conversationEnabled a {@link eu.etaxonomy.cdm.api.conversation.IConversationEnabled} object.
*/
- public ChangeSynonymToAcceptedTaxonOperation(String label, IUndoContext undoContext,
- Taxon taxon, ITaxonTreeNode parentNode, Synonym synonym, Set<TaxonNameBase> namesInHomotypicalGroup, IPostOperationEnabled postOperationEnabled, IConversationEnabled conversationEnabled) {
- super(label, undoContext, postOperationEnabled, conversationEnabled);
+ public ChangeSynonymToAcceptedTaxonOperation(String label,
+ IUndoContext undoContext,
+ Taxon taxon,
+ ITaxonTreeNode parentNode,
+ Synonym synonym,
+ Set<TaxonNameBase> namesInHomotypicalGroup,
+ IPostOperationEnabled postOperationEnabled,
+ IConversationEnabled conversationEnabled,
+ ICdmEntitySessionEnabled cdmEntitySessionEnabled) {
+ super(label, undoContext, postOperationEnabled, conversationEnabled, cdmEntitySessionEnabled);
this.element = taxon;
this.parentNode = parentNode;
throws ExecutionException {
try {
- newTaxon = CdmStore.getService(ITaxonService.class).changeSynonymToAcceptedTaxon(synonym, element, true, true, null, null);
+ newNode = (TaxonNode) CdmStore.getService(ITaxonService.class).changeSynonymToAcceptedTaxon(synonym.getUuid(),
+ element.getUuid(),
+ parentNode.getUuid(),
+ true,
+ true,
+ null,
+ null).getCdmEntity();
} catch (HomotypicalGroupChangeException e) {
MessagingUtils.warningDialog("Operation may lead to inconsistent data", getClass(), e.getMessage());
return postExecute(null);
}
monitor.worked(20);
+ //newTaxon = (Taxon) CdmStore.getService(ITaxonService.class).merge(newTaxon);
+ //element.removeSynonym(synonym);
- element.removeSynonym(synonym);
- newNode = parentNode.addChildTaxon(newTaxon, null, null);
/*if(namesInHomotypicGroup != null){
Taxon taxon = newNode.getTaxon();
for (TaxonNameBase synonymName : namesInHomotypicGroup){
taxon.addHomotypicSynonymName(synonymName, null, null);
-
+
}
}*/
+ //newNode = CdmStore.getService(ITaxonNodeService.class).merge(newNode);
monitor.worked(40);
import org.eclipse.core.runtime.IProgressMonitor;
import org.eclipse.core.runtime.IStatus;
-import eu.etaxonomy.cdm.api.service.ITaxonNodeService;
import eu.etaxonomy.cdm.api.service.ITaxonService;
-import eu.etaxonomy.cdm.model.name.TaxonNameBase;
import eu.etaxonomy.cdm.model.taxon.Synonym;
import eu.etaxonomy.cdm.model.taxon.SynonymRelationshipType;
import eu.etaxonomy.cdm.model.taxon.Taxon;
// add misapplied name to taxon
// TODO add microcitation for misapplied name to property sheet (if microcitation is indeed needed?!)
element.addMisappliedName(misapplication, null, null);*/
- misapplication = CdmStore.getService(ITaxonService.class).changeSynonymToRelatedTaxon(synonym, element, TaxonRelationshipType.MISAPPLIED_NAME_FOR(), null, null);
+ misapplication =
+ (Taxon) CdmStore.getService(ITaxonService.class).changeSynonymToRelatedTaxon(synonym.getUuid(),
+ element.getUuid(),
+ TaxonRelationshipType.MISAPPLIED_NAME_FOR(),
+ null,
+ null).getCdmEntity();
// redraw editor if exists
return postExecute(misapplication);
}
import org.eclipse.core.runtime.IStatus;
import eu.etaxonomy.cdm.model.name.HomotypicalGroup;
-import eu.etaxonomy.cdm.model.name.TaxonNameBase;
+import eu.etaxonomy.cdm.model.name.NonViralName;
import eu.etaxonomy.cdm.model.taxon.SynonymRelationship;
import eu.etaxonomy.cdm.model.taxon.Taxon;
import eu.etaxonomy.taxeditor.operation.AbstractPostTaxonOperation;
AbstractPostTaxonOperation {
private final HomotypicalGroup group;
- private final TaxonNameBase newSynonymName;
+ private final NonViralName newSynonymName;
private SynonymRelationship synonymRelationship;
* @param postOperationEnabled a {@link eu.etaxonomy.taxeditor.operation.IPostOperationEnabled} object.
*/
public CreateSynonymInExistingHomotypicalGroupOperation(String label,
- IUndoContext undoContext, Taxon taxon, HomotypicalGroup group, TaxonNameBase newSynonymName, IPostOperationEnabled postOperationEnabled) {
+ IUndoContext undoContext, Taxon taxon, HomotypicalGroup group, NonViralName newSynonymName, IPostOperationEnabled postOperationEnabled) {
super(label, undoContext, taxon, postOperationEnabled);
this.group = group;
this.newSynonymName = newSynonymName;
import eu.etaxonomy.cdm.api.service.config.TaxonDeletionConfigurator;
import eu.etaxonomy.cdm.model.reference.Reference;
import eu.etaxonomy.cdm.model.taxon.Taxon;
-import eu.etaxonomy.cdm.model.taxon.TaxonRelationship;
import eu.etaxonomy.cdm.model.taxon.TaxonRelationshipType;
import eu.etaxonomy.taxeditor.operation.AbstractPostTaxonOperation;
import eu.etaxonomy.taxeditor.operation.IPostOperationEnabled;
// Find misapplication relation, save citation information
- for (TaxonRelationship relationship : element.getTaxonRelations()) {
- if (relationship.getType().equals(TaxonRelationshipType.MISAPPLIED_NAME_FOR())
- && relationship.getFromTaxon().equals(misapplication)) {
- citation = relationship.getCitation();
- microcitation = relationship.getCitationMicroReference();
- }
- }
+// for (TaxonRelationship relationship : element.getTaxonRelations()) {
+// if (relationship.getType().equals(TaxonRelationshipType.MISAPPLIED_NAME_FOR())
+// && relationship.getFromTaxon().equals(misapplication)) {
+// citation = relationship.getCitation();
+// microcitation = relationship.getCitationMicroReference();
+// }
+// }
monitor.worked(20);
// Remove misapplied name relation from taxon
element.removeTaxon(misapplication, TaxonRelationshipType.MISAPPLIED_NAME_FOR());
ICdmApplicationConfiguration controller;
- controller = (ICdmApplicationConfiguration) CdmStore.getCurrentApplicationConfiguration();
+ controller = CdmStore.getCurrentApplicationConfiguration();
ITaxonService service = controller.getTaxonService();
TaxonDeletionConfigurator config = new TaxonDeletionConfigurator();
ICdmApplicationConfiguration controller;
- controller = (ICdmApplicationConfiguration) CdmStore.getCurrentApplicationConfiguration();
+ controller = CdmStore.getCurrentApplicationConfiguration();
ITaxonService service = controller.getTaxonService();
if (synonym.getId() == 0){
element.removeSynonym(synonym);
} else {
-
- DeleteResult result = service.deleteSynonym(synonym, null);
+
+ DeleteResult result = service.deleteSynonym(synonym.getUuid(), element.getUuid(), null);
if (result.isError()){
MessageDialog.openError(null, "Delete failed", result.toString());
} else if (!result.getUpdatedObjects().isEmpty()){
import eu.etaxonomy.cdm.api.service.config.TaxonDeletionConfigurator;\r
import eu.etaxonomy.taxeditor.operation.AbstractPersistentPostOperation;\r
import eu.etaxonomy.taxeditor.operation.IPostOperationEnabled;\r
+import eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled;\r
\r
public class DeleteTaxonBaseOperation extends AbstractPersistentPostOperation {\r
\r
protected TaxonDeletionConfigurator configurator;\r
\r
- public DeleteTaxonBaseOperation(String label, IUndoContext undoContext,\r
- TaxonDeletionConfigurator configurator, IWorkbenchPage activePage, IPostOperationEnabled postOperationEnabled, IConversationEnabled conversationEnabled) {\r
- super(label, undoContext, postOperationEnabled,\r
- conversationEnabled);\r
+ public DeleteTaxonBaseOperation(String label,\r
+ IUndoContext undoContext,\r
+ TaxonDeletionConfigurator configurator,\r
+ IWorkbenchPage activePage,\r
+ IPostOperationEnabled postOperationEnabled,\r
+ IConversationEnabled conversationEnabled,\r
+ ICdmEntitySessionEnabled cdmEntitySessionEnabled) {\r
+ super(label, undoContext, postOperationEnabled, conversationEnabled, cdmEntitySessionEnabled);\r
this.configurator = configurator;\r
\r
}\r
import eu.etaxonomy.cdm.model.taxon.TaxonNode;\r
import eu.etaxonomy.taxeditor.model.MessagingUtils;\r
import eu.etaxonomy.taxeditor.operation.IPostOperationEnabled;\r
+import eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled;\r
import eu.etaxonomy.taxeditor.store.CdmStore;\r
\r
public class DeleteTaxonOperation extends DeleteTaxonBaseOperation{\r
\r
private final Classification classification;\r
\r
- public DeleteTaxonOperation(String label, IUndoContext undoContext,\r
- Taxon taxon, TaxonDeletionConfigurator configurator, Classification classification, IWorkbenchPage activePage, IPostOperationEnabled postOperationEnabled, IConversationEnabled conversationEnabled) {\r
- super(label, undoContext, configurator, activePage, postOperationEnabled, conversationEnabled);\r
+ public DeleteTaxonOperation(String label,\r
+ IUndoContext undoContext,\r
+ Taxon taxon,\r
+ TaxonDeletionConfigurator configurator,\r
+ Classification classification,\r
+ IWorkbenchPage activePage,\r
+ IPostOperationEnabled postOperationEnabled,\r
+ IConversationEnabled conversationEnabled,\r
+ ICdmEntitySessionEnabled cdmEntitySessionEnabled) {\r
+ super(label, undoContext, configurator, activePage, postOperationEnabled, conversationEnabled, cdmEntitySessionEnabled);\r
this.element = taxon;\r
\r
Set<TaxonNode> nodes = taxon.getTaxonNodes();\r
\r
ITaxonService service = controller.getTaxonService();\r
\r
-\r
DeleteResult result = service.deleteTaxon(element.getUuid(), configurator, classification.getUuid());\r
+
if (result.isError()){\r
MessageDialog.openError(null, "Delete failed", result.toString());\r
} else if (!result.getUpdatedObjects().isEmpty()){\r
\r
import eu.etaxonomy.cdm.api.service.ITaxonService;\r
import eu.etaxonomy.cdm.api.service.exception.HomotypicalGroupChangeException;\r
-import eu.etaxonomy.cdm.hibernate.HibernateProxyHelper;\r
-import eu.etaxonomy.cdm.model.name.HomotypicalGroup;\r
import eu.etaxonomy.cdm.model.name.TaxonNameBase;\r
import eu.etaxonomy.cdm.model.taxon.Synonym;\r
import eu.etaxonomy.cdm.model.taxon.SynonymRelationship;\r
-import eu.etaxonomy.cdm.model.taxon.SynonymRelationshipType;\r
import eu.etaxonomy.cdm.model.taxon.Taxon;\r
import eu.etaxonomy.taxeditor.editor.EditorUtil;\r
import eu.etaxonomy.taxeditor.editor.name.TaxonNameEditor;\r
private final Synonym synonym;\r
\r
private final Taxon oldTaxon;\r
- \r
- \r
+\r
+\r
/**\r
* <p>Constructor for MoveSynonymToAnotherAcceptedTaxon.</p>\r
*\r
* @param undoContext a {@link org.eclipse.core.commands.operations.IUndoContext} object.\r
* @param taxon a {@link eu.etaxonomy.cdm.model.taxon.Taxon} object.\r
* @param synonym a {@link eu.etaxonomy.cdm.model.taxon.Synonym} object.\r
- \r
+\r
* @param postOperationEnabled a {@link eu.etaxonomy.taxeditor.operation.IPostOperationEnabled} object.\r
*/\r
public MoveSynonymToAnotherAcceptedTaxonOperation(String label, IUndoContext undoContext,\r
UUID oldTaxonUUID, UUID synonymUUID, Taxon taxon, IPostOperationEnabled postOperationEnabled) {\r
- \r
+\r
super(label, undoContext, taxon, postOperationEnabled);\r
List<String> propertyPaths = new ArrayList<String>();\r
propertyPaths.add("synonymRelations");\r
TaxonNameBase<?, ?> synonymName = synonym.getName();\r
monitor.worked(20);\r
\r
- \r
+\r
\r
// Switch groups\r
- \r
+\r
monitor.worked(40);\r
SynonymRelationship synRel = synonym.getSynonymRelations().iterator().next();\r
- \r
- \r
- \r
+\r
+\r
+\r
((TaxonNameEditor)EditorUtil.getActiveMultiPageTaxonEditor().getActiveEditor()).getConversationHolder().commit();\r
- \r
- \r
- \r
+\r
+\r
+\r
try {\r
- synRel = CdmStore.getService(ITaxonService.class).moveSynonymToAnotherTaxon(synRel, this.element, true, synRel.getType(), null, null, true);\r
+ synRel = (SynonymRelationship) CdmStore.getService(ITaxonService.class).moveSynonymToAnotherTaxon(synRel,\r
+ this.element.getUuid(),\r
+ true,\r
+ synRel.getType(),\r
+ null,\r
+ null,\r
+ true).getCdmEntity();\r
} catch (HomotypicalGroupChangeException e) {\r
// TODO Auto-generated catch block\r
e.printStackTrace();\r
}\r
((TaxonNameEditor)EditorUtil.getActiveMultiPageTaxonEditor().getActiveEditor()).getConversationHolder().commit();\r
- \r
- \r
+\r
+\r
\r
// Redraw editor if it exists\r
return postExecute(synRel.getSynonym());\r
import org.eclipse.core.runtime.IStatus;
import eu.etaxonomy.cdm.api.service.ITaxonService;
+import eu.etaxonomy.cdm.api.service.UpdateResult;
import eu.etaxonomy.cdm.model.taxon.Synonym;
import eu.etaxonomy.cdm.model.taxon.SynonymRelationshipType;
import eu.etaxonomy.cdm.model.taxon.Taxon;
import eu.etaxonomy.taxeditor.model.MessagingUtils;
import eu.etaxonomy.taxeditor.operation.AbstractPostTaxonOperation;
import eu.etaxonomy.taxeditor.operation.IPostOperationEnabled;
+import eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled;
import eu.etaxonomy.taxeditor.store.CdmStore;
/**
* @param synonym a {@link eu.etaxonomy.cdm.model.taxon.Synonym} object.
*/
public SwapSynonymAndAcceptedOperation(String label, IUndoContext undoContext,
- Taxon taxon, Synonym synonym, IPostOperationEnabled postOperationEnabled) {
- super("Swap Synonym And Accepted Taxon Operation", undoContext, taxon, postOperationEnabled);
+ Taxon taxon, Synonym synonym, IPostOperationEnabled postOperationEnabled,
+ ICdmEntitySessionEnabled cdmEntitySessionEnabled) {
+ super("Swap Synonym And Accepted Taxon Operation", undoContext, taxon, postOperationEnabled, cdmEntitySessionEnabled);
this.synonym = synonym;
}
monitor.worked(20);
- CdmStore.getService(ITaxonService.class).swapSynonymAndAcceptedTaxon(synonym, element);
+ UpdateResult result = CdmStore.getService(ITaxonService.class).swapSynonymAndAcceptedTaxon(synonym.getUuid(), element.getUuid());
monitor.worked(40);
import java.util.ArrayList;
import java.util.Arrays;
+import java.util.Collection;
import java.util.Collections;
import java.util.HashMap;
import java.util.List;
import eu.etaxonomy.cdm.api.conversation.IConversationEnabled;
import eu.etaxonomy.cdm.api.service.ITaxonNodeService;
import eu.etaxonomy.cdm.hibernate.HibernateProxyHelper;
+import eu.etaxonomy.cdm.model.common.CdmBase;
import eu.etaxonomy.cdm.model.common.DefinedTermBase;
import eu.etaxonomy.cdm.model.taxon.Classification;
import eu.etaxonomy.cdm.model.taxon.Taxon;
import eu.etaxonomy.taxeditor.model.IPartContentHasFactualData;
import eu.etaxonomy.taxeditor.preference.PreferencesUtil;
import eu.etaxonomy.taxeditor.preference.Resources;
+import eu.etaxonomy.taxeditor.session.ICdmEntitySession;
+import eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled;
import eu.etaxonomy.taxeditor.store.CdmStore;
/**
* @version 1.0
*/
public class ChecklistEditor extends EditorPart implements ISelectionListener, IPartContentHasFactualData,
- IConversationEnabled, IContextListener, IPartContentHasDetails, IDirtyMarkable {
+ IConversationEnabled, IContextListener, IPartContentHasDetails, IDirtyMarkable, ICdmEntitySessionEnabled {
private static final Logger logger = Logger.getLogger(ChecklistEditor.class);
/**
private Label statusLabel;
+ private final ICdmEntitySession cdmEntitySession;
+
private SortedSet<DefinedTermBase> terms = null;
private ToolItem toolItem;
private ChecklistDropdownSelectionListener dropListener;
* </p>
*/
public ChecklistEditor() {
+ cdmEntitySession = CdmStore.getCurrentSessionManager().newSession(this, true);
}
/** {@inheritDoc} */
/** {@inheritDoc} */
@Override
public void dispose() {
+ cdmEntitySession.dispose();
super.dispose();
}
/** {@inheritDoc} */
@Override
public void setFocus() {
+ cdmEntitySession.bind();
viewer.getControl().setFocus();
}
public boolean isDirty() {
return dirty;
}
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled#getCdmEntitySession()
+ */
+ @Override
+ public ICdmEntitySession getCdmEntitySession() {
+ // TODO Auto-generated method stub
+ return null;
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled#getRootEntities()
+ */
+ @Override
+ public <T extends CdmBase> Collection<T> getRootEntities() {
+ // TODO Auto-generated method stub
+ return null;
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled#getPropertyPathsMap()
+ */
+ @Override
+ public Map<Object, List<String>> getPropertyPathsMap() {
+ // TODO Auto-generated method stub
+ return null;
+ }
}
getViewer().refresh();
super.changed(object);
}
+
}
return layoutAlgoritm;
}
+
}
import java.util.Collection;
import org.apache.http.client.ClientProtocolException;
+import org.eclipse.core.runtime.jobs.Job;
import eu.etaxonomy.cdm.ext.occurrence.bioCase.BioCaseQueryServiceWrapper;
import eu.etaxonomy.cdm.io.common.CdmDefaultImport;
+import eu.etaxonomy.cdm.io.common.IImportConfigurator.SOURCE_TYPE;
import eu.etaxonomy.cdm.io.specimen.abcd206.in.Abcd206ImportConfigurator;
import eu.etaxonomy.cdm.model.occurrence.SpecimenOrObservationBase;
import eu.etaxonomy.taxeditor.editor.view.dataimport.transientServices.TransientCdmRepository;
//FIXME move ABCD import to cdmlib -> this will also get rid of the transient services
InputStream resultStream;
resultStream = new BioCaseQueryServiceWrapper().query(query, endPoint);
- Abcd206ImportConfigurator configurator = Abcd206ImportConfigurator.NewInstance(resultStream, null, false);
+ Abcd206ImportConfigurator configurator = Abcd206ImportConfigurator.NewInstance(null, null);
TransientCdmRepository repo =
new TransientCdmRepository(CdmStore.getCurrentApplicationConfiguration());
configurator.setCdmAppController(repo);
configurator.setAddMediaAsMediaSpecimen(true);
-
- CdmDefaultImport<Abcd206ImportConfigurator> importer = new CdmDefaultImport<Abcd206ImportConfigurator>();
- importer.invoke(configurator);
+ if(CdmStore.getCurrentSessionManager().isRemoting()) {
+ Job job = CdmStore.getImportManager().createIOServiceJob(configurator, resultStream, SOURCE_TYPE.INPUTSTREAM);
+ CdmStore.getImportManager().run(job);
+ } else {
+ configurator.setSource(resultStream);
+ CdmDefaultImport<Abcd206ImportConfigurator> importer = new CdmDefaultImport<Abcd206ImportConfigurator>();
+ importer.invoke(configurator);
+ }
results = repo.getUnits();
setResults(results);
} catch (ClientProtocolException e) {
return defaultService.moveSequence(arg0, arg1, arg2);
}
-
}
}
/* (non-Javadoc)
- * @see eu.etaxonomy.cdm.api.service.ITaxonService#changeRelatedTaxonToSynonym(java.util.UUID, java.util.UUID, eu.etaxonomy.cdm.model.taxon.TaxonRelationshipType, eu.etaxonomy.cdm.model.taxon.SynonymRelationshipType)
+ * @see eu.etaxonomy.cdm.api.service.ITaxonService#changeSynonymToRelatedTaxon(java.util.UUID, java.util.UUID, eu.etaxonomy.cdm.model.taxon.TaxonRelationshipType, eu.etaxonomy.cdm.model.reference.Reference, java.lang.String)
*/
@Override
- public UpdateResult changeRelatedTaxonToSynonym(UUID arg0, UUID arg1, TaxonRelationshipType arg2,
- SynonymRelationshipType arg3) throws DataChangeNoRollbackException {
- return defaultService.changeRelatedTaxonToSynonym(arg0, arg1, arg2, arg3);
+ public UpdateResult changeSynonymToRelatedTaxon(UUID arg0, UUID arg1, TaxonRelationshipType arg2, Reference arg3,
+ String arg4) {
+ return defaultService.changeSynonymToRelatedTaxon(arg0, arg1, arg2, arg3, arg4);
}
/* (non-Javadoc)
- * @see eu.etaxonomy.cdm.api.service.ITaxonService#changeSynonymToRelatedTaxon(java.util.UUID, java.util.UUID, eu.etaxonomy.cdm.model.taxon.TaxonRelationshipType, eu.etaxonomy.cdm.model.reference.Reference, java.lang.String)
+ * @see eu.etaxonomy.cdm.api.service.ITaxonService#changeRelatedTaxonToSynonym(java.util.UUID, java.util.UUID, eu.etaxonomy.cdm.model.taxon.TaxonRelationshipType, eu.etaxonomy.cdm.model.taxon.SynonymRelationshipType)
*/
@Override
- public UpdateResult changeSynonymToRelatedTaxon(UUID arg0, UUID arg1, TaxonRelationshipType arg2, Reference arg3,
- String arg4) {
- return defaultService.changeSynonymToRelatedTaxon(arg0, arg1, arg2, arg3, arg4);
+ public UpdateResult changeRelatedTaxonToSynonym(UUID arg0, UUID arg1, TaxonRelationshipType arg2,
+ SynonymRelationshipType arg3) throws DataChangeNoRollbackException {
+ return defaultService.changeRelatedTaxonToSynonym(arg0, arg1, arg2, arg3);
+
}
/* (non-Javadoc)
Reference arg5, String arg6) throws HomotypicalGroupChangeException {
return defaultService.changeSynonymToAcceptedTaxon(arg0, arg1, arg2, arg3, arg4, arg5, arg6);
}
+
}
import java.util.HashSet;
import java.util.Map.Entry;
import java.util.Set;
-import java.util.UUID;
import org.eclipse.core.runtime.IProgressMonitor;
import org.eclipse.jface.action.MenuManager;
import eu.etaxonomy.cdm.api.conversation.ConversationHolder;
import eu.etaxonomy.cdm.api.conversation.IConversationEnabled;
-import eu.etaxonomy.cdm.api.service.IOccurrenceService;
import eu.etaxonomy.cdm.api.service.molecular.ISequenceService;
import eu.etaxonomy.cdm.model.common.CdmBase;
import eu.etaxonomy.cdm.model.molecular.Sequence;
*/
public class DerivateView extends EditorPart implements IPartContentHasFactualData, IDirtyMarkable,
IConversationEnabled, IPartContentHasDetails, IPartContentHasSupplementalData, IPartContentHasMedia,
- ISelectionChangedListener, IPostOperationEnabled {
+ ISelectionChangedListener, IPostOperationEnabled{
public static final String ID = "eu.etaxonomy.taxeditor.editor.view.derivate.DerivateView"; //$NON-NLS-1$
private ISelection selection = null;
+
+ private DerivateContentProvider contentProvider;
+
/**
* Default constructor
*/
@Override
public void createPartControl(Composite parent) {
viewer = new TreeViewer(new Tree(parent, SWT.MULTI | SWT.H_SCROLL | SWT.V_SCROLL | SWT.FULL_SELECTION));
- viewer.setContentProvider(new DerivateContentProvider());
+ contentProvider = new DerivateContentProvider();
+ viewer.setContentProvider(contentProvider);
labelProvider = new DerivateLabelProvider();
labelProvider.setConversation(conversation);
viewer.setLabelProvider(labelProvider);
generateMultiLinkSingleReads();
labelProvider.setMultiLinkSingleReads(multiLinkSingleReads);
IEditorInput editorInput = getEditorInput();
- viewer.setInput(((DerivateViewEditorInput) editorInput).getRootUUIDs());
+ viewer.setInput(((DerivateViewEditorInput) editorInput).getRootEntities());
//set selection to selected derivate if only one was selected
if(editorInput instanceof DerivateViewEditorInput){
- Set<UUID> derivateUUIDs = ((DerivateViewEditorInput) editorInput).getDerivateUUIDs();
- if(derivateUUIDs.size()==1){
- SpecimenOrObservationBase<?> specimen = CdmStore.getService(IOccurrenceService.class).load(derivateUUIDs.iterator().next());
- if(specimen!=null){
+ Set<SpecimenOrObservationBase<?>> derivateEntities = ((DerivateViewEditorInput) editorInput).getDerivateEntities();
+ if(derivateEntities.size()==1){
+ SpecimenOrObservationBase<?> specimen = derivateEntities.iterator().next();
+ if(specimen != null){
viewer.setSelection(new StructuredSelection(new TreeNode(specimen)));
}
}
// commit the conversation and start a new transaction immediately
conversation.commit(true);
+ ((DerivateViewEditorInput) getEditorInput()).merge();
monitor.worked(1);
this.setDirty(false);
if(!conversation.isBound()){
conversation.bind();
}
+ ((DerivateViewEditorInput) getEditorInput()).bind();
}
@Override
viewer.refresh();
}
+ //FIXME:Remoting hack to make this work for remoting
+ //This should actually be resolved using remoting post operations
+ public void remove(Object obj) {
+ Set<SpecimenOrObservationBase<?>> rootEntities = ((DerivateViewEditorInput) getEditorInput()).getRootEntities();
+ rootEntities.remove(obj);
+ viewer.setInput(rootEntities);
+ }
+
private void generateMultiLinkSingleReads() {
Set<SingleRead> multiLinkSingleReads = new HashSet<SingleRead>();
for(Entry<SingleRead, Collection<Sequence>> entry:CdmStore.getService(ISequenceService.class).getSingleReadSequencesMap().entrySet()){
return true;
}
+ @Override
+ public void dispose() {
+ ((DerivateViewEditorInput) getEditorInput()).dispose();
+ super.dispose();
+ }
+
+
@Override
public boolean canAttachMedia() {
return true;
}
-
}
*/
package eu.etaxonomy.taxeditor.editor.view.derivate;
+import java.util.ArrayList;
+import java.util.Arrays;
+import java.util.HashMap;
import java.util.HashSet;
+import java.util.List;
+import java.util.Map;
import java.util.Set;
import java.util.UUID;
import org.eclipse.ui.IEditorInput;
import org.eclipse.ui.IPersistableElement;
+import eu.etaxonomy.cdm.api.application.CdmApplicationState;
import eu.etaxonomy.cdm.api.conversation.ConversationHolder;
import eu.etaxonomy.cdm.api.service.IOccurrenceService;
import eu.etaxonomy.cdm.model.occurrence.DerivedUnit;
import eu.etaxonomy.cdm.model.occurrence.FieldUnit;
import eu.etaxonomy.cdm.model.occurrence.SpecimenOrObservationBase;
+import eu.etaxonomy.taxeditor.editor.CdmEntitySessionInput;
import eu.etaxonomy.taxeditor.editor.EditorUtil;
import eu.etaxonomy.taxeditor.editor.Messages;
import eu.etaxonomy.taxeditor.model.MessagingUtils;
* @date 25.11.2013
*
*/
-public class DerivateViewEditorInput implements IEditorInput{
+public class DerivateViewEditorInput extends CdmEntitySessionInput implements IEditorInput {
/**
* The selected derivate {@link UUID}s
*/
- private final Set<UUID> derivateUUIDs;
+ private final Set<SpecimenOrObservationBase<?>> derivateEntities;
/**
* List of the {@link UUID}s of the root elements of the hierarchy (may be the same objects as the derivates)
*/
+ private Set<SpecimenOrObservationBase<?>> rootEntities;
private Set<UUID> rootUUIDs;
private final ConversationHolder conversationHolder;
+ private static final List<String> SPECIMEN_INIT_STRATEGY = Arrays.asList(new String[] {
+ "descriptions",
+ "annotations",
+ "markers",
+ "credits",
+ "extensions",
+ "rights",
+ "sources",
+ "derivationEvents.derivatives.annotations",
+ "derivationEvents.derivatives.markers",
+ "derivationEvents.derivatives.credits",
+ "derivationEvents.derivatives.extensions",
+ "derivationEvents.derivatives.rights",
+ "derivationEvents.derivatives.sources"
+ });
+
/**
* Creates an editor input for the {@link DerivateView} with the currently selected derivates and the
* corresponding {@link FieldUnit}s (both may be the same object).
* @param rootUUIDs the root of the hierarchy
*/
public DerivateViewEditorInput(Set<UUID> derivateUuids) {
- super();
+ super(false);
+ rootUUIDs = derivateUuids;
+ //FIXME:Remoting temporary hack for making the sessions work
+ //This should ideally be changed to initializing the
+ //super class with a collection of (id) objects which can
+ //then be used for the hashCode, equals methods
+ initSession();
this.conversationHolder = CdmStore.createConversation();
- this.derivateUUIDs = derivateUuids;
- this.rootUUIDs = new HashSet<UUID>();
+ this.derivateEntities = new HashSet<SpecimenOrObservationBase<?>>();
+ this.rootEntities = new HashSet<SpecimenOrObservationBase<?>>();
for (UUID uuid : derivateUuids) {
- SpecimenOrObservationBase<?> derivate = CdmStore.getService(IOccurrenceService.class).load(uuid);
+ SpecimenOrObservationBase<?> derivate = CdmStore.getService(IOccurrenceService.class).load(uuid, SPECIMEN_INIT_STRATEGY);
+ derivateEntities.add(derivate);
if(derivate instanceof FieldUnit){
- rootUUIDs.add(uuid);
+ rootEntities.add(derivate);
}
else if(derivate instanceof DerivedUnit){
SpecimenOrObservationBase<?> topMostDerivate = EditorUtil.getTopMostDerivate(derivate);
if(topMostDerivate!=null){
- rootUUIDs.add(topMostDerivate.getUuid());
+ rootEntities.add(topMostDerivate);
}
}
}
- if(rootUUIDs.isEmpty()){
- rootUUIDs = derivateUUIDs;
+ if(rootEntities.isEmpty()){
+ rootEntities = derivateEntities;
}
- if(rootUUIDs.isEmpty()){
+ if(rootEntities.isEmpty()){
MessagingUtils.messageDialog(Messages.DerivateViewEditorInput_FAIL_INIT, DerivateViewEditorInput.class, Messages.DerivateViewEditorInput_NO_ROOT);
}
+
+
}
/* (non-Javadoc)
private String getEditorName() {
String name = null;
- for(UUID uuid:rootUUIDs){
- SpecimenOrObservationBase<?> specimen = CdmStore.getService(IOccurrenceService.class).load(uuid);
+ for( SpecimenOrObservationBase<?> specimen : rootEntities){
if(specimen!=null){
if(name==null){
name = DerivateLabelProvider.getDerivateText(specimen, conversationHolder);
return name;
}
- public Set<UUID> getRootUUIDs() {
- return rootUUIDs;
+ @Override
+ public Set<SpecimenOrObservationBase<?>> getRootEntities() {
+ return rootEntities;
}
- public Set<UUID> getDerivateUUIDs() {
- return derivateUUIDs;
+ public Set<SpecimenOrObservationBase<?>> getDerivateEntities() {
+ return derivateEntities;
}
- public void addRootUuid(UUID root){
- rootUUIDs.add(root);
+ public void addRootEntity(SpecimenOrObservationBase<?> root){
+ rootEntities.add(root);
}
return true;
}
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.editor.CdmEntitySessionInput#merge()
+ */
+ @Override
+ public void merge() {
+ List<SpecimenOrObservationBase> mergedEntities = CdmApplicationState.getCurrentAppConfig().getOccurrenceService().merge(new ArrayList(getRootEntities()));
+
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled#getPropertyPathsMap()
+ */
+ @Override
+ public Map<Object, List<String>> getPropertyPathsMap() {
+ List<String> specimenPropertyPaths = Arrays.asList(new String[] {
+ "descriptions",
+ "derivationEvents.derivates",
+ "annotations",
+ "markers",
+ "credits",
+ "extensions",
+ "rights",
+ "sources"
+ });
+ Map<Object, List<String>> specimenPropertyPathMap =
+ new HashMap<Object, List<String>>();
+ specimenPropertyPathMap.put(SpecimenOrObservationBase.class,specimenPropertyPaths);
+ return specimenPropertyPathMap;
+ }
+
}
import org.eclipse.ui.PlatformUI;
import org.eclipse.ui.actions.CompoundContributionItem;
+import eu.etaxonomy.cdm.api.application.CdmApplicationState;
import eu.etaxonomy.cdm.api.facade.DerivedUnitFacadeCacheStrategy;
+import eu.etaxonomy.cdm.api.service.IOccurrenceService;
import eu.etaxonomy.cdm.model.media.Media;
import eu.etaxonomy.cdm.model.molecular.DnaSample;
import eu.etaxonomy.cdm.model.molecular.Sequence;
import eu.etaxonomy.taxeditor.editor.view.derivate.DerivateView;
import eu.etaxonomy.taxeditor.model.AbstractUtility;
import eu.etaxonomy.taxeditor.model.MessagingUtils;
+import eu.etaxonomy.taxeditor.store.CdmStore;
import eu.etaxonomy.taxeditor.ui.dialog.selection.MediaSelectionDialog;
/**
specimenOrObservationBase.addDerivationEvent(DerivationEvent.NewSimpleInstance(specimenOrObservationBase, mediaSpecimen, derivationEventType));
mediaSpecimen.setCacheStrategy(new DerivedUnitFacadeCacheStrategy());
mediaSpecimen.getTitleCache(); //update title cache
+ CdmStore.getService(IOccurrenceService.class).merge(specimenOrObservationBase);
}
//refresh view
derivateView = (DerivateView) AbstractUtility.getActivePart();
}
if(derivateView!=null){
+
derivateView.getConversationHolder().commit();
derivateView.refreshTree(mediaSpecimen);
}
Sequence newInstance = Sequence.NewInstance(dnaSample, "", 0); //$NON-NLS-1$
createdElement = newInstance;
}
+ CdmStore.getService(IOccurrenceService.class).merge((SpecimenOrObservationBase) selectedDerivate);
}
else if(selectedDerivate instanceof Sequence){
SingleRead newInstance = SingleRead.NewInstance();
((Sequence) selectedDerivate).addSingleRead(newInstance);
createdElement = newInstance;
+ CdmApplicationState.getCurrentAppConfig().getSequenceService().merge((Sequence)selectedDerivate);
}
else if(selectedDerivate instanceof SpecimenOrObservationBase && DerivedUnit.class.isAssignableFrom(childClass)){
SpecimenOrObservationBase<?> specimenOrObservationBase = (SpecimenOrObservationBase<?>)selectedDerivate;
derivedUnit.setCacheStrategy(new DerivedUnitFacadeCacheStrategy());
derivedUnit.getTitleCache(); //update title cache
createdElement = derivedUnit;
+ CdmStore.getService(IOccurrenceService.class).merge((SpecimenOrObservationBase) selectedDerivate);
}
//refresh view
if(derivateView!=null){
+ //CdmStore.getService(IOccurrenceService.class).merge((SpecimenOrObservationBase) selectedDerivate);
derivateView.getConversationHolder().commit();
derivateView.refreshTree(createdElement);
}
import org.eclipse.core.commands.ExecutionException;
import eu.etaxonomy.cdm.api.service.IOccurrenceService;
+import eu.etaxonomy.cdm.model.common.CdmBase;
import eu.etaxonomy.cdm.model.occurrence.FieldUnit;
import eu.etaxonomy.taxeditor.editor.view.derivate.DerivateView;
import eu.etaxonomy.taxeditor.editor.view.derivate.DerivateViewEditorInput;
return null;
}
FieldUnit fieldUnit = FieldUnit.NewInstance();
- CdmStore.getService(IOccurrenceService.class).save(fieldUnit);
+ fieldUnit = CdmBase.deproxy(CdmStore.getService(IOccurrenceService.class).save(fieldUnit), FieldUnit.class);
derivateView.getConversationHolder().commit();
DerivateViewEditorInput input = (DerivateViewEditorInput) derivateView.getEditorInput();
- input.addRootUuid(fieldUnit.getUuid());
+ input.addRootEntity(fieldUnit);
derivateView.refreshTree();
}
return null;
import eu.etaxonomy.cdm.api.service.DeleteResult;
import eu.etaxonomy.cdm.api.service.IOccurrenceService;
import eu.etaxonomy.cdm.api.service.config.SpecimenDeleteConfigurator;
+import eu.etaxonomy.cdm.api.service.molecular.ISequenceService;
import eu.etaxonomy.cdm.model.common.CdmBase;
import eu.etaxonomy.cdm.model.molecular.Sequence;
import eu.etaxonomy.cdm.model.molecular.SingleRead;
&& treeNode.getValue().equals(element)
&& treeNode.getParent()!=null
&& treeNode.getParent().getValue() instanceof Sequence){
- deleteResult = CdmStore.getService(IOccurrenceService.class).deleteSingleRead((SingleRead)element, (Sequence) treeNode.getParent().getValue());
- }
- else{
- deleteResult = CdmStore.getService(IOccurrenceService.class).deleteDerivateHierarchy(element, deleteConfigurator);
+ deleteResult = CdmStore.getService(IOccurrenceService.class).deleteSingleRead(((SingleRead)element).getUuid(),
+ ((Sequence) treeNode.getParent().getValue()).getUuid());
+ } else if(element instanceof Sequence){
+ deleteResult = CdmStore.getService(ISequenceService.class).delete(element.getUuid(), deleteConfigurator);
+ } else {
+ deleteResult = CdmStore.getService(IOccurrenceService.class).deleteDerivateHierarchy(element.getUuid(), deleteConfigurator);
}
if(deleteResult.isOk()){
if(getPostOperationEnabled() instanceof DerivateView){
DerivateView derivateView = (DerivateView) getPostOperationEnabled();
+ derivateView.remove(element);
//update DerivateView
derivateView.getConversationHolder().commit();
IStatus returnStatus = postExecute(null);
if(fromParentSpecimen instanceof SpecimenOrObservationBase<?>
&& fromNode!=null
&& !fromNode.equals(targetNode)){//don't drag on direct parent node)
- return occurrenceService.moveDerivate((SpecimenOrObservationBase<?>)fromParentSpecimen, targetSpecimen, draggedSpecimen);
+ return occurrenceService.moveDerivate(((SpecimenOrObservationBase<?>)fromParentSpecimen).getUuid(),
+ targetSpecimen.getUuid(),
+ draggedSpecimen.getUuid()).isOk();
}
}
else if(draggedNodeValue instanceof SingleRead && targetNodeValue instanceof Sequence){
SingleRead singleRead = (SingleRead) draggedNodeValue;
if(fromParentSpecimen instanceof Sequence){
- return CdmStore.getService(ISequenceService.class).moveSingleRead((Sequence)fromParentSpecimen, (Sequence)targetNodeValue, singleRead).isOk();
+ return CdmStore.getService(ISequenceService.class).moveSingleRead(((Sequence)fromParentSpecimen).getUuid(),
+ ((Sequence)targetNodeValue).getUuid(),
+ singleRead.getUuid()).isOk();
+
}
}
else if(draggedNodeValue instanceof Sequence && targetNodeValue instanceof DnaSample && ((SpecimenOrObservationBase<?>) targetNodeValue).getRecordBasis()==SpecimenOrObservationType.DnaSample){
Sequence sequence = (Sequence)draggedNodeValue;
if(fromParentSpecimen instanceof DnaSample && ((SpecimenOrObservationBase<?>) targetNodeValue).getRecordBasis()==SpecimenOrObservationType.DnaSample){
- return occurrenceService.moveSequence((DnaSample)fromParentSpecimen, (DnaSample)targetNodeValue, sequence).isOk();
+ return occurrenceService.moveSequence(((DnaSample)fromParentSpecimen).getUuid(),
+ ((DnaSample)targetNodeValue).getUuid(),
+ sequence.getUuid()).isOk();
+
}
}
return false;
protected static final Object[] NO_CHILDREN = new Object[0];
protected Map<DescriptionBase<?>, FeatureNodeContainerTree> featureNodeContainerCache;
private boolean showOnlyIndividualAssociations;
+ private static FeatureTree defaultFeatureTree = null;
public DescriptiveContentProvider(Map<DescriptionBase<?>, FeatureNodeContainerTree> featureNodeContainerCache) {
this(featureNodeContainerCache, false);
* @return
*/
private FeatureTree getFeatureTree(DescriptionBase description){
- FeatureTree featureTree = null;
+ if(defaultFeatureTree == null) {
+ defaultFeatureTree = FeatureTree.NewInstance(TermStore.getTerms(Feature.class));
+ }
+ FeatureTree featureTree;
// TODO change this to the feature tree associated with this taxon description
if (description.hasStructuredData()){
featureTree = PreferencesUtil.getDefaultFeatureTreeForStructuredDescription();
// create a transient tree with all features if none was selected
if(featureTree == null){
- featureTree = FeatureTree.NewInstance(TermStore.getTerms(Feature.class));
+ featureTree = defaultFeatureTree;
}
return featureTree;
import eu.etaxonomy.taxeditor.editor.view.checklist.ChecklistEditor;
import eu.etaxonomy.taxeditor.editor.view.derivate.DerivateView;
import eu.etaxonomy.taxeditor.editor.view.derivate.DerivateViewEditorInput;
+import eu.etaxonomy.taxeditor.editor.view.media.MediaViewPart;
import eu.etaxonomy.taxeditor.model.AbstractUtility;
import eu.etaxonomy.taxeditor.model.FeatureNodeContainer;
import eu.etaxonomy.taxeditor.model.FeatureNodeContainerTree;
if(part == this){
return;
}
- if(part instanceof DetailsViewPart || part instanceof SupplementalDataViewPart){
- // do not show empty page as these views are also used to edit the description selected in this view
- return;
- }
+ if (part instanceof DetailsViewPart || part instanceof SupplementalDataViewPart
+ || part instanceof MediaViewPart) {
+ // do not show empty page as these views are also used to edit the
+ // description selected in this view
+ return;
+ }
// unpackage TreeNode of DerivateView
else if(part instanceof DerivateView){
TreeNode treeNodeOfSelection = EditorUtil.getTreeNodeOfSelection(selection);
import eu.etaxonomy.taxeditor.model.MessagingUtils;
import eu.etaxonomy.taxeditor.operation.AbstractPostOperation;
import eu.etaxonomy.taxeditor.operation.IPostOperationEnabled;
+import eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled;
/**
* <p>DeleteDescriptionHandler class.</p>
IWorkbenchPart part = HandlerUtil.getActivePart(event);
IPostOperationEnabled postOperationEnabled = (part instanceof IPostOperationEnabled) ? (IPostOperationEnabled) part : null;
+ ICdmEntitySessionEnabled cdmEntitySessionEnabled = (part instanceof ICdmEntitySessionEnabled) ? (ICdmEntitySessionEnabled) part : null;
try {
String label = event.getCommand().getName();
// TaxonDescription
if(object instanceof TaxonDescription){
- operations.add(new DeleteTaxonDescriptionOperation(label, undoContext, (TaxonDescription) object, postOperationEnabled));
+ operations.add(new DeleteTaxonDescriptionOperation(label, undoContext, (TaxonDescription) object, postOperationEnabled, cdmEntitySessionEnabled));
}
else if(object instanceof SpecimenDescription){
- operations.add(new DeleteSpecimenDescriptionOperation(label, undoContext, (SpecimenDescription) object, postOperationEnabled));
+ operations.add(new DeleteSpecimenDescriptionOperation(label, undoContext, (SpecimenDescription) object, postOperationEnabled, cdmEntitySessionEnabled)) ;
}
// DescriptionElementBase
else if(object instanceof DescriptionElementBase){
- operations.add(new DeleteDescriptionElementOperation(label, undoContext, (DescriptionElementBase) object, postOperationEnabled));
+ operations.add(new DeleteDescriptionElementOperation(label, undoContext, (DescriptionElementBase) object, postOperationEnabled, cdmEntitySessionEnabled));
}
else if(object instanceof FeatureNodeContainer){
List<DescriptionElementBase> descriptions = ((FeatureNodeContainer) object).getDescriptionElementsForEntireBranch();
for(DescriptionElementBase description : descriptions){
- operations.add(new DeleteDescriptionElementOperation(label, undoContext, description, postOperationEnabled));
+ operations.add(new DeleteDescriptionElementOperation(label, undoContext, description, postOperationEnabled, cdmEntitySessionEnabled));
}
}
// Media
import eu.etaxonomy.cdm.api.service.IDescriptionService;
import eu.etaxonomy.cdm.hibernate.HibernateProxyHelper;
-import eu.etaxonomy.cdm.model.common.Annotation;
-import eu.etaxonomy.cdm.model.common.AnnotationType;
import eu.etaxonomy.cdm.model.common.CdmBase;
-import eu.etaxonomy.cdm.model.common.Language;
import eu.etaxonomy.cdm.model.description.DescriptionBase;
import eu.etaxonomy.cdm.model.description.DescriptionElementBase;
import eu.etaxonomy.cdm.model.description.TaxonDescription;
return null;
}
newAcceptedTaxonNodeUuid = newAcceptedTaxonNode.getUuid();
- TaxonDescription targetDescription = TaxonDescription.NewInstance(targetTaxon);
+
String moveMessage = String.format("Elements moved from %s", EditorUtil.getActiveMultiPageTaxonEditor().getTaxon());
- targetDescription.setTitleCache(moveMessage, true);
- Annotation annotation = Annotation.NewInstance(moveMessage, Language.getDefaultLanguage());
- annotation.setAnnotationType(AnnotationType.TECHNICAL());
- targetDescription.addAnnotation(annotation);
try {
AbstractPostOperation operation = new MoveDescriptionElementsOperation(
event.getCommand().getName(), EditorUtil.getUndoContext(),
- targetDescription, elements, false, this);
+ targetTaxon.getUuid(), moveMessage, elements, false, this);
EditorUtil.executeOperation(operation);
import eu.etaxonomy.cdm.model.common.CdmBase;
import eu.etaxonomy.cdm.model.description.DescriptionBase;
import eu.etaxonomy.cdm.model.description.TaxonDescription;
+import eu.etaxonomy.cdm.model.taxon.Classification;
import eu.etaxonomy.cdm.model.taxon.TaxonNode;
import eu.etaxonomy.taxeditor.editor.EditorUtil;
import eu.etaxonomy.taxeditor.editor.MultiPageTaxonEditor;
import eu.etaxonomy.taxeditor.editor.Page;
+import eu.etaxonomy.taxeditor.editor.TaxonEditorInput;
import eu.etaxonomy.taxeditor.editor.name.TaxonNameEditor;
import eu.etaxonomy.taxeditor.editor.view.descriptive.operation.MoveDescriptionToOtherTaxonOperation;
import eu.etaxonomy.taxeditor.model.AbstractUtility;
import eu.etaxonomy.taxeditor.model.FeatureNodeContainer;
import eu.etaxonomy.taxeditor.model.MessagingUtils;
import eu.etaxonomy.taxeditor.operation.IPostOperationEnabled;
+import eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled;
import eu.etaxonomy.taxeditor.store.CdmStore;
import eu.etaxonomy.taxeditor.ui.dialog.selection.TaxonNodeSelectionDialog;
} else if (element instanceof DescriptionBase){
uuid = ((DescriptionBase)element).getUuid();
}
-
+
if (uuid != null){
descriptions.add((TaxonDescription) CdmStore.getService(IDescriptionService.class).load(uuid, null));
}
List<UUID> excludeTaxa = new ArrayList<UUID>();
editor = (TaxonNameEditor) EditorUtil.getActiveEditorPage(Page.NAME);
excludeTaxa.add(descriptions.get(0).getTaxon().getUuid());
+
+ //get current taxon node
+ TaxonNode node = null;
+ Classification classification = null;
+ MultiPageTaxonEditor taxonEditor = EditorUtil.getActiveMultiPageTaxonEditor();
+ if(taxonEditor!=null){
+ node = ((TaxonEditorInput) taxonEditor.getEditorInput()).getTaxonNode();
+ classification = node.getClassification();
+ }
TaxonNode newAcceptedTaxonNode = TaxonNodeSelectionDialog.select(HandlerUtil.getActiveShell(event),
editor.getConversationHolder(),
"Choose the accepted taxon",
excludeTaxa,
- null,
- null);
+ node,
+ classification);
if (newAcceptedTaxonNode == null) {
return null;
try {
for(TaxonDescription description : descriptions){
operation = new MoveDescriptionToOtherTaxonOperation(event.getCommand().getName(),
- editor.getUndoContext(), description, newAcceptedTaxonNode, this, editor);
+ editor.getUndoContext(),
+ description,
+ newAcceptedTaxonNode,
+ this,
+ editor,
+ (ICdmEntitySessionEnabled)editor.getEditorInput());
AbstractUtility.executeOperation(operation);
}
/**
* Copyright (C) 2007 EDIT
-* European Distributed Institute of Taxonomy
+* European Distributed Institute of Taxonomy
* http://www.e-taxonomy.eu
-*
+*
* The contents of this file are subject to the Mozilla Public License Version 1.1
* See LICENSE.TXT at the top of this package for the full license terms.
*/
import eu.etaxonomy.taxeditor.model.MessagingUtils;
import eu.etaxonomy.taxeditor.operation.AbstractPostTaxonOperation;
import eu.etaxonomy.taxeditor.operation.IPostOperationEnabled;
+import eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled;
/**
* <p>DeleteDescriptionElementOperation class.</p>
* @version 1.0
*/
public class DeleteDescriptionElementOperation extends AbstractPostTaxonOperation {
-
- private DescriptionElementBase element;
+
+ private final DescriptionElementBase element;
private DescriptionBase description = null;
/**
* @param postOperationEnabled a {@link eu.etaxonomy.taxeditor.operation.IPostOperationEnabled} object.
*/
public DeleteDescriptionElementOperation(String label, IUndoContext undoContext,
- DescriptionElementBase element, IPostOperationEnabled postOperationEnabled) {
- super(label, undoContext, postOperationEnabled);
-
+ DescriptionElementBase element, IPostOperationEnabled postOperationEnabled,
+ ICdmEntitySessionEnabled cdmEntitySessionEnabled) {
+ super(label, undoContext, postOperationEnabled, cdmEntitySessionEnabled);
+
this.element = element;
}
@Override
public IStatus execute(IProgressMonitor monitor, IAdaptable info)
throws ExecutionException {
-
+
description = element.getInDescription();
-
+
monitor.worked(20);
-
+
// Remove element from description
if (description == null) {
MessagingUtils.error(this.getClass(), "Couldn't find element's description!", null);
throws ExecutionException {
description.addElement(element);
-
+
return postExecute(element);
}
}
import eu.etaxonomy.cdm.model.occurrence.SpecimenOrObservationBase;
import eu.etaxonomy.taxeditor.operation.AbstractPostOperation;
import eu.etaxonomy.taxeditor.operation.IPostOperationEnabled;
+import eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled;
import eu.etaxonomy.taxeditor.store.CdmStore;
/**
private final SpecimenDescription description;
- public DeleteSpecimenDescriptionOperation(String label, IUndoContext undoContext,
- SpecimenDescription description, IPostOperationEnabled postOperationEnabled) {
- super(label, undoContext, description.getDescribedSpecimenOrObservation(), postOperationEnabled);
+ public DeleteSpecimenDescriptionOperation(String label,
+ IUndoContext undoContext,
+ SpecimenDescription description,
+ IPostOperationEnabled postOperationEnabled,
+ ICdmEntitySessionEnabled cdmEntitySessionEnabled) {
+ super(label, undoContext, description.getDescribedSpecimenOrObservation(), postOperationEnabled, cdmEntitySessionEnabled);
this.description = description;
}
package eu.etaxonomy.taxeditor.editor.view.descriptive.operation;
-import java.util.ArrayList;
-import java.util.List;
-
import org.eclipse.core.commands.ExecutionException;
import org.eclipse.core.commands.operations.IUndoContext;
import org.eclipse.core.runtime.IAdaptable;
import eu.etaxonomy.cdm.model.description.TaxonDescription;
import eu.etaxonomy.taxeditor.operation.AbstractPostTaxonOperation;
import eu.etaxonomy.taxeditor.operation.IPostOperationEnabled;
+import eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled;
import eu.etaxonomy.taxeditor.store.CdmStore;
/**
* @param description a {@link eu.etaxonomy.cdm.model.description.TaxonDescription} object.
* @param postOperationEnabled a {@link eu.etaxonomy.taxeditor.operation.IPostOperationEnabled} object.
*/
- public DeleteTaxonDescriptionOperation(String label, IUndoContext undoContext,
- TaxonDescription description, IPostOperationEnabled postOperationEnabled) {
- super(label, undoContext, postOperationEnabled);
+ public DeleteTaxonDescriptionOperation(String label,
+ IUndoContext undoContext,
+ TaxonDescription description,
+ IPostOperationEnabled postOperationEnabled,
+ ICdmEntitySessionEnabled cdmEntitySessionEnabled) {
+ super(label, undoContext, postOperationEnabled, cdmEntitySessionEnabled);
this.description = description;
element = description.getTaxon();
monitor.worked(20);
if (description != null){
- List<String> propertyPaths = new ArrayList<String>();
- propertyPaths.add("taxon");
- TaxonDescription loadedDescription = (TaxonDescription) CdmStore.getService(IDescriptionService.class).load(description.getUuid(), propertyPaths);
- CdmStore.getService(IDescriptionService.class).deleteDescription(loadedDescription);
+ CdmStore.getService(IDescriptionService.class).deleteDescription(description.getUuid());
return postExecute(description);
}
return null;
-
+
}
/* (non-Javadoc)
// $Id$
/**
* Copyright (C) 2007 EDIT
-* European Distributed Institute of Taxonomy
+* European Distributed Institute of Taxonomy
* http://www.e-taxonomy.eu
-*
+*
* The contents of this file are subject to the Mozilla Public License Version 1.1
* See LICENSE.TXT at the top of this package for the full license terms.
*/
package eu.etaxonomy.taxeditor.editor.view.descriptive.operation;
import java.util.Collection;
+import java.util.HashSet;
+import java.util.Set;
+import java.util.UUID;
import org.eclipse.core.commands.ExecutionException;
import org.eclipse.core.commands.operations.IUndoContext;
import org.eclipse.core.runtime.IAdaptable;
import org.eclipse.core.runtime.IProgressMonitor;
import org.eclipse.core.runtime.IStatus;
-import org.eclipse.swt.widgets.Display;
-import org.eclipse.ui.PartInitException;
import eu.etaxonomy.cdm.api.service.IDescriptionService;
-import eu.etaxonomy.cdm.model.common.CdmBase;
+import eu.etaxonomy.cdm.api.service.UpdateResult;
import eu.etaxonomy.cdm.model.description.DescriptionBase;
import eu.etaxonomy.cdm.model.description.DescriptionElementBase;
-import eu.etaxonomy.taxeditor.editor.EditorUtil;
-import eu.etaxonomy.taxeditor.editor.MultiPageTaxonEditor;
-import eu.etaxonomy.taxeditor.model.AbstractUtility;
-import eu.etaxonomy.taxeditor.model.MessagingUtils;
import eu.etaxonomy.taxeditor.operation.AbstractPostTaxonOperation;
import eu.etaxonomy.taxeditor.operation.IPostOperationEnabled;
import eu.etaxonomy.taxeditor.store.CdmStore;
private Collection<DescriptionElementBase> descriptionElements;
private DescriptionBase targetDescription;
private IDescriptionService service;
+ private UUID targetTaxonUuid;
+ private String moveMessage;
private boolean isCopy;
/**
- *
+ *
* @param label
* @param undoContext
* @param targetDescription
* @param postOperationEnabled
*/
public MoveDescriptionElementsOperation(String label,
- IUndoContext undoContext, DescriptionBase targetDescription,
+ IUndoContext undoContext, DescriptionBase targetDescription,
Collection<DescriptionElementBase> descriptionElements, boolean isCopy,
IPostOperationEnabled postOperationEnabled) {
super(label, undoContext, postOperationEnabled);
this.targetDescription = targetDescription;
this.descriptionElements = descriptionElements;
this.isCopy = isCopy;
-
+
service = CdmStore.getService(IDescriptionService.class);
}
+ public MoveDescriptionElementsOperation(String label,
+ IUndoContext undoContext, UUID targetTaxonUuid,String moveMessage,
+ Collection<DescriptionElementBase> descriptionElements, boolean isCopy,
+ IPostOperationEnabled postOperationEnabled) {
+ super(label, undoContext, postOperationEnabled);
+ this.targetTaxonUuid = targetTaxonUuid;
+ this.descriptionElements = descriptionElements;
+ this.moveMessage = moveMessage;
+ this.isCopy = isCopy;
+
+ service = CdmStore.getService(IDescriptionService.class);
+ }
+
/* (non-Javadoc)
* @see org.eclipse.core.commands.operations.AbstractOperation#execute(org.eclipse.core.runtime.IProgressMonitor, org.eclipse.core.runtime.IAdaptable)
*/
@Override
public IStatus execute(IProgressMonitor monitor, IAdaptable info)
throws ExecutionException {
-
-
- service.moveDescriptionElementsToDescription(descriptionElements, targetDescription, isCopy);
-
-
+
+ Set<UUID> descriptionElementsUuid = new HashSet<UUID>();
+ for(DescriptionElementBase deBase : descriptionElements) {
+ descriptionElementsUuid.add(deBase.getUuid());
+ }
+
+ if(targetDescription == null){
+ UpdateResult result = service.moveDescriptionElementsToDescription(descriptionElementsUuid, targetTaxonUuid, moveMessage, isCopy);
+
+ } else {
+ UUID targetDescriptionUuid = targetDescription.getUuid();
+ service.moveDescriptionElementsToDescription(descriptionElementsUuid, targetDescriptionUuid, isCopy);
+ }
return postExecute(targetDescription);
}
// TODO Auto-generated method stub
return null;
}
-
-
+
+
}
// $Id$
/**
* Copyright (C) 2007 EDIT
-* European Distributed Institute of Taxonomy
+* European Distributed Institute of Taxonomy
* http://www.e-taxonomy.eu
-*
+*
* The contents of this file are subject to the Mozilla Public License Version 1.1
* See LICENSE.TXT at the top of this package for the full license terms.
*/
import eu.etaxonomy.taxeditor.editor.EditorUtil;
import eu.etaxonomy.taxeditor.operation.AbstractPersistentPostOperation;
import eu.etaxonomy.taxeditor.operation.IPostOperationEnabled;
+import eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled;
import eu.etaxonomy.taxeditor.store.CdmStore;
/**
*/
public class MoveDescriptionToOtherTaxonOperation extends
AbstractPersistentPostOperation {
-
- private TaxonNode newAcceptedTaxonNode;
- private TaxonDescription description;
-
+ private final TaxonNode newAcceptedTaxonNode;
+
+ private final TaxonDescription description;
+
/**
* <p>Constructor for ChangeAcceptedTaxonToSynonymOperation.</p>
*
* @param conversationEnabled a {@link eu.etaxonomy.cdm.api.conversation.IConversationEnabled} object.
*/
public MoveDescriptionToOtherTaxonOperation(String label,
- IUndoContext undoContext, TaxonDescription description, TaxonNode targetTaxonNode,
- IPostOperationEnabled postOperationEnabled, IConversationEnabled conversationEnabled) {
- super(label, undoContext, postOperationEnabled, conversationEnabled); // FIXME is this the right constructor ???
+ IUndoContext undoContext,
+ TaxonDescription description,
+ TaxonNode targetTaxonNode,
+ IPostOperationEnabled postOperationEnabled,
+ IConversationEnabled conversationEnabled,
+ ICdmEntitySessionEnabled cdmEntitySessionEnabled) {
+ super(label, undoContext, postOperationEnabled, conversationEnabled, cdmEntitySessionEnabled); // FIXME is this the right constructor ???
this.description = description;
this.newAcceptedTaxonNode = targetTaxonNode;
}
monitor.worked(20);
bind();
-
+
String moveMessage = String.format("Description moved from %s", EditorUtil.getActiveMultiPageTaxonEditor().getTaxon());
if(description.isProtectedTitleCache()){
String separator = "";
annotation.setAnnotationType(AnnotationType.TECHNICAL());
description.addAnnotation(annotation);
newAcceptedTaxonNode.getTaxon().addDescription(description);
- CdmStore.getService(IDescriptionService.class).saveOrUpdate(description);
+ CdmStore.getService(IDescriptionService.class).merge(description);
monitor.worked(40);
-
+
return postExecute(description);
}
import org.eclipse.swt.widgets.Control;
import org.eclipse.swt.widgets.Menu;
import org.eclipse.swt.widgets.Tree;
-import org.eclipse.ui.IEditorInput;
-import org.eclipse.ui.IEditorPart;
import org.eclipse.ui.IWorkbenchActionConstants;
import org.eclipse.ui.IWorkbenchPart;
+import eu.etaxonomy.cdm.model.description.IDescribable;
import eu.etaxonomy.cdm.model.occurrence.SpecimenOrObservationBase;
import eu.etaxonomy.taxeditor.bulkeditor.BulkEditor;
-import eu.etaxonomy.taxeditor.editor.MultiPageTaxonEditor;
+import eu.etaxonomy.taxeditor.editor.view.descriptive.DescriptiveViewPart;
import eu.etaxonomy.taxeditor.model.AbstractUtility;
import eu.etaxonomy.taxeditor.model.IPartContentHasDetails;
import eu.etaxonomy.taxeditor.model.IPartContentHasMedia;
return;
}
- if(part instanceof DetailsViewPart || part instanceof SupplementalDataViewPart){
- // do not show empty page as these views are also used to edit the description selected in this view
+ if (part instanceof DetailsViewPart || part instanceof SupplementalDataViewPart
+ || part instanceof DescriptiveViewPart) {
+ // do not show empty page as these views are also used to edit the
+ // description selected in this view
return;
}
if(part instanceof IPartContentHasMedia && ((IPartContentHasMedia) part).canAttachMedia()){
- if(part instanceof MultiPageTaxonEditor){
- IEditorInput input = ((IEditorPart) part).getEditorInput();
- showViewer(part, new StructuredSelection(input));
- return;
- }
- else if(selection instanceof IStructuredSelection){
+ if(selection instanceof IStructuredSelection){
Object firstElement = ((IStructuredSelection) selection).getFirstElement();
if(firstElement instanceof TreeNode){
showViewer(part, new StructuredSelection(((TreeNode) firstElement).getValue()));
return;
}
- else if(firstElement!=null){
+ else if(firstElement!=null
+ && firstElement instanceof IDescribable<?>){
showViewer(part, (IStructuredSelection) selection);
return;
}
+++ /dev/null
-### ************ APPENDER ***********************************###\r
-\r
-### direct log messages to stdout ###\r
-log4j.appender.stdout=org.apache.log4j.ConsoleAppender\r
-log4j.appender.stdout.Target=System.out\r
-log4j.appender.stdout.layout=org.apache.log4j.PatternLayout\r
-log4j.appender.stdout.layout.ConversionPattern=%d{ABSOLUTE} %5p %c{1}:%L - %m%n\r
-\r
-### direct messages to file hibernate.log ###\r
-log4j.appender.file=org.apache.log4j.FileAppender\r
-log4j.appender.file.File=taxeditor.log\r
-log4j.appender.file.layout=org.apache.log4j.PatternLayout\r
-log4j.appender.file.layout.ConversionPattern=%d{ABSOLUTE} %5p %c{1}:%L - %m%n\r
-\r
-### ************* LOG LEVELS *********************************###\r
-\r
-### set log levels - for more verbose logging change 'info' to 'debug' ###\r
-### levels: error, warn, debug, info\r
-log4j.rootLogger=INFO, stdout\r
-\r
-### set directory-specific levels below\r
-\r
-### basic level for editor directory\r
-log4j.logger.eu.etaxonomy.taxeditor.editor = WARN, stdout \r
-\r
-log4j.logger.eu.etaxonomy.taxeditor.editor.handler = DEBUG, stdout\r
-\r
-### log level for conversation handler\r
-#log4j.logger.eu.etaxonomy.cdm.api.application = DEBUG, stdout\r
-\r
-log4j.logger.org.springframework.orm.hibernate3 = WARN, stdout \r
-\r
-\r
// $Id$
/**
* Copyright (C) 2007 EDIT
-* European Distributed Institute of Taxonomy
+* European Distributed Institute of Taxonomy
* http://www.e-taxonomy.eu
-*
+*
* The contents of this file are subject to the Mozilla Public License Version 1.1
* See LICENSE.TXT at the top of this package for the full license terms.
*/
import eu.etaxonomy.cdm.model.name.HomotypicalGroup;
import eu.etaxonomy.cdm.model.name.NonViralName;
-import eu.etaxonomy.cdm.model.name.TaxonNameBase;
import eu.etaxonomy.cdm.model.taxon.SynonymRelationship;
import eu.etaxonomy.cdm.model.taxon.SynonymRelationshipType;
import eu.etaxonomy.cdm.model.taxon.Taxon;
-import eu.etaxonomy.taxeditor.editor.name.operation.CreateSynonymInExistingHomotypicalGroupOperation;
import eu.etaxonomy.taxeditor.store.operations.AbstractTaxeditorOperationTestBase;
/**
*/
public class CreateSynonymInExisitingHomotypicalGroupOperationTest extends AbstractTaxeditorOperationTestBase {
- private TaxonNameBase newSynonymName;
+ private NonViralName newSynonymName;
private HomotypicalGroup homotypicalGroup;
private NonViralName<?> taxonName;
-
+
/**
* @throws java.lang.Exception
*/
@Before
public void setUp() throws Exception {
-
+
taxonName = NonViralName.NewInstance(null);
taxon = Taxon.NewInstance(taxonName, null);
-
+
homotypicalGroup = HomotypicalGroup.NewInstance();
newSynonymName = NonViralName.NewInstance(null);
-
+
operation = new CreateSynonymInExistingHomotypicalGroupOperation("Create Synonym In Existing Homotypical Group",
undoContext, taxon, homotypicalGroup, newSynonymName, postOperation);
}
/**
* Test method for {@link eu.etaxonomy.taxeditor.editor.name.operation.CreateSynonymInExistingHomotypicalGroupOperation#execute(org.eclipse.core.runtime.IProgressMonitor, org.eclipse.core.runtime.IAdaptable)}.
- *
+ *
* Homotypic group is the Taxons homotypic group, so we expect the synonym to be homotypic to the accepted taxon.
- *
- * @throws ExecutionException
+ *
+ * @throws ExecutionException
*/
@Test
- public void testExecuteTaxonHomotypicGroup() throws ExecutionException {
+ public void testExecuteTaxonHomotypicGroup() throws ExecutionException {
homotypicalGroup.addTypifiedName(taxonName);
operation.execute(monitor, info);
-
+
Assert.assertTrue("Taxon should have a synonym now.", taxon.getSynonyms().size() > 0);
Assert.assertTrue("Taxon should have a homotypic synonym now", taxon.getHomotypicSynonymsByHomotypicGroup().size() > 0);
}
-
+
/**
* Test method for {@link eu.etaxonomy.taxeditor.editor.name.operation.CreateSynonymInExistingHomotypicalGroupOperation#execute(org.eclipse.core.runtime.IProgressMonitor, org.eclipse.core.runtime.IAdaptable)}.
- *
+ *
* Homotypic group is not the accepted taxons. Heterotypic synonym should be created.
- *
- * @throws ExecutionException
+ *
+ * @throws ExecutionException
*/
@Test
- public void testExecuteSynonymHomotypicGroup() throws ExecutionException {
+ public void testExecuteSynonymHomotypicGroup() throws ExecutionException {
// test heterotypic synonym
operation.execute(monitor, info);
-
+
Assert.assertTrue("Taxon should have a synonym now.", taxon.getSynonyms().size() > 0);
Assert.assertTrue("Taxon should have a homotypic group", taxon.getHomotypicSynonymyGroups().size() > 0);
Assert.assertEquals("Synonym relationship should be heterotypic", SynonymRelationshipType.HETEROTYPIC_SYNONYM_OF(), taxon.getSynonymRelations().toArray(new SynonymRelationship[0])[0].getType());
}
-
+
/**
* Test method for {@link eu.etaxonomy.taxeditor.editor.name.operation.CreateSynonymInExistingHomotypicalGroupOperation#undo(org.eclipse.core.runtime.IProgressMonitor, org.eclipse.core.runtime.IAdaptable)}.
- * @throws ExecutionException
+ * @throws ExecutionException
*/
@Test
public void testUndoTaxonHomotypicGroup() throws ExecutionException {
homotypicalGroup.addTypifiedName(taxonName);
-
+
operation.execute(monitor, info);
operation.undo(monitor, info);
-
+
Assert.assertTrue("There should not be synonym relationships for the taxon", taxon.getSynonyms().size() == 0);
}
-
+
/**
* Test method for {@link eu.etaxonomy.taxeditor.editor.name.operation.CreateSynonymInExistingHomotypicalGroupOperation#undo(org.eclipse.core.runtime.IProgressMonitor, org.eclipse.core.runtime.IAdaptable)}.
- * @throws ExecutionException
+ * @throws ExecutionException
*/
@Test
public void testUndoSynonymHomotypicGroup() throws ExecutionException {
operation.execute(monitor, info);
operation.undo(monitor, info);
-
+
Assert.assertTrue("There should not be synonym relationships for the taxon", taxon.getSynonyms().size() == 0);
}
/**
* Test method for {@link eu.etaxonomy.taxeditor.editor.name.operation.CreateSynonymInExistingHomotypicalGroupOperation#redo(org.eclipse.core.runtime.IProgressMonitor, org.eclipse.core.runtime.IAdaptable)}.
- * @throws ExecutionException
+ * @throws ExecutionException
*/
@Test
public void testRedoTaxonHomotypicGroup() throws ExecutionException {
homotypicalGroup.addTypifiedName(taxonName);
-
+
operation.execute(monitor, info);
- operation.undo(monitor, info);
+ operation.undo(monitor, info);
operation.redo(monitor, info);
-
+
Assert.assertTrue("Taxon should have a synonym now.", taxon.getSynonyms().size() > 0);
Assert.assertTrue("Taxon should have a homotypic synonym now", taxon.getHomotypicSynonymsByHomotypicGroup().size() > 0);
}
-
+
/**
* Test method for {@link eu.etaxonomy.taxeditor.editor.name.operation.CreateSynonymInExistingHomotypicalGroupOperation#redo(org.eclipse.core.runtime.IProgressMonitor, org.eclipse.core.runtime.IAdaptable)}.
- * @throws ExecutionException
+ * @throws ExecutionException
*/
@Test
public void testRedoSynonymHomotypicGroup() throws ExecutionException {
operation.execute(monitor, info);
- operation.undo(monitor, info);
+ operation.undo(monitor, info);
operation.redo(monitor, info);
-
+
Assert.assertTrue("Taxon should have a synonym now.", taxon.getSynonyms().size() > 0);
Assert.assertTrue("Taxon should have a homotypic group", taxon.getHomotypicSynonymyGroups().size() > 0);
Assert.assertEquals("Synonym relationship should be heterotypic", SynonymRelationshipType.HETEROTYPIC_SYNONYM_OF(), taxon.getSynonymRelations().toArray(new SynonymRelationship[0])[0].getType());
// $Id$
/**
* Copyright (C) 2007 EDIT
-* European Distributed Institute of Taxonomy
+* European Distributed Institute of Taxonomy
* http://www.e-taxonomy.eu
-*
+*
* The contents of this file are subject to the Mozilla Public License Version 1.1
* See LICENSE.TXT at the top of this package for the full license terms.
*/
private static DescriptionElementBase descriptionElement;
private static TaxonDescription description;
-
+
/**
* @throws java.lang.Exception
*/
public static void setUpBeforeClass() throws Exception {
taxon = Taxon.NewInstance(null, null);
descriptionElement = TextData.NewInstance();
-
+
description = TaxonDescription.NewInstance();
-
+
description.addElement(descriptionElement);
-
+
taxon.addDescription(description);
-
-
- operation = new DeleteDescriptionElementOperation("", undoContext, descriptionElement, postOperation);
+
+
+ operation = new DeleteDescriptionElementOperation("", undoContext, descriptionElement, postOperation, cdmEntitySessionEnabled);
}
/**
* Test method for {@link eu.etaxonomy.taxeditor.editor.view.descriptive.operation.DeleteDescriptionElementOperation#execute(org.eclipse.core.runtime.IProgressMonitor, org.eclipse.core.runtime.IAdaptable)}.
- * @throws ExecutionException
+ * @throws ExecutionException
*/
@Test
public void testExecuteIProgressMonitorIAdaptable() throws ExecutionException {
operation.execute(monitor, info);
-
+
Assert.assertTrue(taxon.getDescriptions().toArray(new TaxonDescription[0])[0].getElements().size() == 0);
}
/**
* Test method for {@link eu.etaxonomy.taxeditor.editor.view.descriptive.operation.DeleteDescriptionElementOperation#undo(org.eclipse.core.runtime.IProgressMonitor, org.eclipse.core.runtime.IAdaptable)}.
- * @throws ExecutionException
+ * @throws ExecutionException
*/
@Test
public void testUndoIProgressMonitorIAdaptable() throws ExecutionException {
operation.undo(monitor, info);
-
+
Assert.assertTrue(taxon.getDescriptions().toArray(new TaxonDescription[0])[0].getElements().size() > 0);
Assert.assertEquals(descriptionElement, taxon.getDescriptions().toArray(new TaxonDescription[0])[0].getElements().toArray(new DescriptionElementBase[0])[0]);
}
/**
* Test method for {@link eu.etaxonomy.taxeditor.editor.view.descriptive.operation.DeleteDescriptionElementOperation#redo(org.eclipse.core.runtime.IProgressMonitor, org.eclipse.core.runtime.IAdaptable)}.
- * @throws ExecutionException
+ * @throws ExecutionException
*/
@Test
public void testRedoIProgressMonitorIAdaptable() throws ExecutionException {
operation.redo(monitor, info);
-
+
Assert.assertTrue(taxon.getDescriptions().toArray(new TaxonDescription[0])[0].getElements().size() == 0);
}
}
/**
* Copyright (C) 2007 EDIT
-* European Distributed Institute of Taxonomy
+* European Distributed Institute of Taxonomy
* http://www.e-taxonomy.eu
-*
+*
* The contents of this file are subject to the Mozilla Public License Version 1.1
* See LICENSE.TXT at the top of this package for the full license terms.
*/
import eu.etaxonomy.cdm.model.taxon.Taxon;
import eu.etaxonomy.cdm.model.taxon.TaxonRelationship;
import eu.etaxonomy.cdm.model.taxon.TaxonRelationshipType;
-import eu.etaxonomy.taxeditor.editor.name.operation.SwapSynonymAndAcceptedOperation;
import eu.etaxonomy.taxeditor.operation.AbstractPostOperation;
import eu.etaxonomy.taxeditor.store.operations.AbstractTaxeditorOperationTestBase;
public class SwapSynonymAndAcceptedOperationTest extends AbstractTaxeditorOperationTestBase {
private static final Logger logger = Logger
.getLogger(SwapSynonymAndAcceptedOperationTest.class);
-
+
private static AbstractPostOperation operation;
private static Taxon taxon;
private static NonViralName<?> oldTaxonName;
-
+
/**
* @throws java.lang.Exception
*/
@BeforeClass
public static void setUpBeforeClass() throws Exception {
-
+
(new DefaultTermInitializer()).initialize();
-
+
// Create the original accepted taxon
oldTaxonName = NonViralName.NewInstance(null);
taxon = Taxon.NewInstance(oldTaxonName, null);
-
+
// Create its parent taxon
parentTaxon = Taxon.NewInstance(NonViralName.NewInstance(null), null);
parentTaxon.addTaxonomicChild(taxon, null, null);
// Give it a child taxon
childTaxon = Taxon.NewInstance(NonViralName.NewInstance(null), null);
childTaxon.setTaxonomicParent(taxon, null, null);
-
+
// Create a homotypic synonym for the accepted taxon
taxon.addHomotypicSynonymName(NonViralName.NewInstance(null), null, null);
// homotypicSynonym = Synonym.NewInstance(NonViralName.NewInstance(null), null);
// HomotypicalGroup acceptedHomotypicalGroup = HomotypicalGroup.NewInstance();
// acceptedHomotypicalGroup.addTypifiedName(oldTaxon.getName());
// acceptedHomotypicalGroup.addTypifiedName(homotypicSynonym.getName());
-
+
// Create a heterotypic synonym that will be used to create the new accepted taxon
oldSynonymName = NonViralName.NewInstance(null);
oldHeterotypicSynonym = Synonym.NewInstance(oldSynonymName, null);
heteroypicalGroup = HomotypicalGroup.NewInstance();
heteroypicalGroup.addTypifiedName(oldHeterotypicSynonym.getName());
taxon.addSynonym(oldHeterotypicSynonym, SynonymRelationshipType.HETEROTYPIC_SYNONYM_OF());
-
+
// Create a misapplication
misapplication = Taxon.NewInstance(NonViralName.NewInstance(null), null);
- taxon.addMisappliedName(misapplication, null, null);
-
+ taxon.addMisappliedName(misapplication, null, null);
+
// Create a concept relation
concept = Taxon.NewInstance(NonViralName.NewInstance(null), null);
conceptRelationshipType = TaxonRelationshipType.CONGRUENT_TO();
- concept.addTaxonRelation(taxon, conceptRelationshipType, null, null);
-
+ concept.addTaxonRelation(taxon, conceptRelationshipType, null, null);
+
// Create a description
description = TaxonDescription.NewInstance();
taxon.addDescription(description);
-
+
operation = new SwapSynonymAndAcceptedOperation
- (null, undoContext, taxon, oldHeterotypicSynonym, postOperation);
+ (null, undoContext, taxon, oldHeterotypicSynonym, postOperation, cdmEntitySessionEnabled);
}
/**
* Test method for {@link eu.etaxonomy.taxeditor.editor.name.operation.ChangeHomotypicGroupOperation#execute(org.eclipse.core.runtime.IProgressMonitor, org.eclipse.core.runtime.IAdaptable)}.
- * @throws ExecutionException
+ * @throws ExecutionException
*/
@Test
public void testExecute() throws ExecutionException {
operation.execute(null, null);
-
- // New taxon has correct name?
+
+ // New taxon has correct name?
Assert.assertEquals(taxon.getName(), oldSynonymName);
-
+
// New taxon has correct parent?
Assert.assertEquals(taxon.getTaxonomicParent(), parentTaxon);
-
+
// New taxon has correct child?
Assert.assertTrue(taxon.getTaxonomicChildren().contains(childTaxon));
-
+
// New taxon has 2 synonyms?
Assert.assertEquals(taxon.getSynonyms().size(), 2);
-
+
// New taxon has a synonym with the name of the previous accepted taxon?
Assert.assertTrue(taxon.getSynonymNames().contains(oldTaxonName));
-
+
// New taxon has misapplication?
Assert.assertTrue(taxon.getMisappliedNames().contains(misapplication));
-
+
// New taxon has 1 concept relation?
int conceptRelCount = 0;
for (TaxonRelationship relation : taxon.getTaxonRelations()) {
conceptRelCount++;
}
Assert.assertEquals(conceptRelCount, 1);
-
+
// New taxon has description?
taxon.getDescriptions().contains(description);
}
/**
* Test method for {@link eu.etaxonomy.taxeditor.editor.name.operation.ChangeHomotypicGroupOperation#undo(org.eclipse.core.runtime.IProgressMonitor, org.eclipse.core.runtime.IAdaptable)}.
- * @throws ExecutionException
+ * @throws ExecutionException
*/
@Test
public void testUndo() throws ExecutionException {
operation.undo(null, null);
-
+
// Assert.assertEquals(oldHomotypicalGroup, synonym.getHomotypicGroup());
}
-
+
/**
* Test method for {@link eu.etaxonomy.taxeditor.editor.name.operation.ChangeHomotypicGroupOperation#redo(org.eclipse.core.runtime.IProgressMonitor, org.eclipse.core.runtime.IAdaptable)}.
- * @throws ExecutionException
+ * @throws ExecutionException
*/
@Test
public void testRedo() throws ExecutionException {
operation.redo(null, null);
-
+
// Assert.assertEquals(newHomotypicalGroup, synonym.getHomotypicGroup());
}
<feature
id="eu.etaxonomy.taxeditor.feature.platform"
label="Taxeditor Dependencies"
- version="3.8.0.qualifier"
+ version="3.12.0.qualifier"
os="linux,macosx,win32"
ws="cocoa,gtk,win32"
arch="x86,x86_64">
<parent>
<groupId>eu.etaxonomy</groupId>
<artifactId>taxeditor-parent</artifactId>
- <version>3.8.0-SNAPSHOT</version>
+ <version>3.12.0-SNAPSHOT</version>
</parent>
<modelVersion>4.0.0</modelVersion>
<artifactId>eu.etaxonomy.taxeditor.feature.platform</artifactId>
<feature
id="eu.etaxonomy.taxeditor.feature"
label="Taxonomic Editor"
- version="3.8.0.qualifier"
+ version="3.12.0.qualifier"
provider-name="EDIT"
plugin="eu.etaxonomy.taxeditor.application"
os="linux,macosx,win32"
<parent>
<groupId>eu.etaxonomy</groupId>
<artifactId>taxeditor-parent</artifactId>
- <version>3.8.0-SNAPSHOT</version>
+ <version>3.12.0-SNAPSHOT</version>
</parent>
<modelVersion>4.0.0</modelVersion>
<artifactId>eu.etaxonomy.taxeditor.feature</artifactId>
Bundle-ManifestVersion: 2
Bundle-Name: Help
Bundle-SymbolicName: eu.etaxonomy.taxeditor.help; singleton:=true
-Bundle-Version: 3.8.0.qualifier
+Bundle-Version: 3.12.0.qualifier
Bundle-Activator: eu.etaxonomy.taxeditor.help.Activator
Bundle-Vendor: EDIT
Require-Bundle: org.eclipse.ui,
<parent>
<groupId>eu.etaxonomy</groupId>
<artifactId>taxeditor-parent</artifactId>
- <version>3.8.0-SNAPSHOT</version>
+ <version>3.12.0-SNAPSHOT</version>
</parent>
<modelVersion>4.0.0</modelVersion>
Bundle-ManifestVersion: 2
Bundle-Name: eu.etaxonomy.taxeditor.molecular.lib
Bundle-SymbolicName: eu.etaxonomy.taxeditor.molecular.lib;singleton:=true
-Bundle-Version: 3.8.0.qualifier
+Bundle-Version: 3.12.0.qualifier
Bundle-ClassPath: .,
lib/bioinfweb-commons-bio-2-SNAPSHOT.jar,
lib/bioinfweb-commons-core-2-SNAPSHOT.jar,
<parent>
<groupId>eu.etaxonomy</groupId>
<artifactId>taxeditor-parent</artifactId>
- <version>3.8.0-SNAPSHOT</version>
+ <version>3.12.0-SNAPSHOT</version>
</parent>
<build>
timestamp</echo>
<move todir="./lib">
<fileset dir="./lib" />
- <mapper type="regexp"
- from="(^bioinfweb\-.*\-[0-9]-)[0-9.-]+(\.jar)" to="\1SNAPSHOT\2" />
+ <mapper type="regexp" from="(^bioinfweb\-.*\-[0-9]-)[0-9.-]+(\.jar)" to="\1SNAPSHOT\2" />
</move>
<move todir="./lib">
<fileset dir="./lib" />
- <mapper type="regexp"
- from="(^libralign\-.*\-[0-9]-)[0-9.-]+(\.jar)" to="\1SNAPSHOT\2" />
+ <mapper type="regexp" from="(^libralign\-.*\-[0-9]-)[0-9.-]+(\.jar)" to="\1SNAPSHOT\2" />
</move>
<move todir="./lib">
<fileset dir="./lib" />
- <mapper type="regexp"
- from="(^tic\-.*\-[0-9]-)[0-9.-]+(\.jar)" to="\1SNAPSHOT\2" />
+ <mapper type="regexp" from="(^tic\-.*\-[0-9]-)[0-9.-]+(\.jar)" to="\1SNAPSHOT\2" />
</move>
<move todir="./lib">
<fileset dir="./lib" />
- <mapper type="regexp"
- from="(^core\-[0-9]\.[0-9]\.[0-9])(\.jar)" to="\1-SNAPSHOT\2" />
+ <mapper type="regexp" from="(^core\-[0-9]\.[0-9]\.[0-9])(\.jar)" to="\1-SNAPSHOT\2" />
</move>
<move todir="./lib">
<fileset dir="./lib" />
- <mapper type="regexp"
- from="(^sequencing\-[0-9]\.[0-9]\.[0-9])(\.jar)" to="\1-SNAPSHOT\2" />
+ <mapper type="regexp" from="(^sequencing\-[0-9]\.[0-9]\.[0-9])(\.jar)" to="\1-SNAPSHOT\2" />
</move>
</target>
</configuration>
Bundle-ManifestVersion: 2
Bundle-Name: Molecular Bundle
Bundle-SymbolicName: eu.etaxonomy.taxeditor.molecular;singleton:=true
-Bundle-Version: 3.8.0.qualifier
+Bundle-Version: 3.12.0.qualifier
Bundle-Activator: eu.etaxonomy.taxeditor.molecular.TaxeditorMolecularPlugin
Require-Bundle: org.eclipse.ui,
org.eclipse.core.runtime,
-<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
- xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/maven-v4_0_0.xsd">
+<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/maven-v4_0_0.xsd">
<parent>
<groupId>eu.etaxonomy</groupId>
<artifactId>taxeditor-parent</artifactId>
- <version>3.8.0-SNAPSHOT</version>
+ <version>3.12.0-SNAPSHOT</version>
</parent>
<modelVersion>4.0.0</modelVersion>
Bundle-ManifestVersion: 2
Bundle-Name: Navigation Bundle
Bundle-SymbolicName: eu.etaxonomy.taxeditor.navigation;singleton:=true
-Bundle-Version: 3.8.0.qualifier
+Bundle-Version: 3.12.0.qualifier
Bundle-Vendor: EDIT
Export-Package: eu.etaxonomy.cdm,
eu.etaxonomy.taxeditor.navigation,
eu.etaxonomy.taxeditor.navigation.internal,
eu.etaxonomy.taxeditor.navigation.key.polytomous,
+ eu.etaxonomy.taxeditor.navigation.key.polytomous.operation,
eu.etaxonomy.taxeditor.navigation.navigator,
+ eu.etaxonomy.taxeditor.navigation.navigator.operation,
eu.etaxonomy.taxeditor.navigation.search
Require-Bundle: org.eclipse.ui,
org.eclipse.ui.navigator,
commandId="eu.etaxonomy.taxeditor.navigation.command.create.taxonNode"
label="%command.label.13"
style="push">
+ <visibleWhen
+ checkEnabled="true">
+ <reference
+ definitionId="isCdmStoreConnected">
+ </reference>
+ </visibleWhen>
</command>
<separator
name="eu.etaxonomy.navigation.menu.new.separator1"
id="eu.etaxonomy.taxeditor.navigation.create.classificationHandler"
label="%command.label.14"
style="push">
+ <visibleWhen
+ checkEnabled="true">
+ <reference
+ definitionId="isCdmStoreConnected">
+ </reference>
+ </visibleWhen>
</command>
</menuContribution>
<menuContribution
</with>
</activeWhen>
</handler>
+ <handler
+ class="eu.etaxonomy.taxeditor.navigation.navigator.handler.RemotingChangeAcceptedTaxonToSynonymHandler"
+ commandId="eu.etaxonomy.taxeditor.navigator.command.update.changeAcceptedToSynonym">
+ <activeWhen>
+ <reference
+ definitionId="isRemoting">
+ </reference>
+ </activeWhen>
+ </handler>
+ <handler
+ class="eu.etaxonomy.taxeditor.navigation.navigator.handler.RemotingMoveFactualDataHandler"
+ commandId="eu.etaxonomy.taxeditor.navigation.moveFactualData">
+ <activeWhen>
+ <reference
+ definitionId="isRemoting">
+ </reference>
+ </activeWhen>
+ </handler>
+ <handler
+ class="eu.etaxonomy.taxeditor.navigation.navigator.handler.RemotingMoveTaxonNodeHandler"
+ commandId="eu.etaxonomy.taxeditor.navigation.command.update.moveTaxon">
+ <activeWhen>
+ <reference
+ definitionId="isRemoting">
+ </reference>
+ </activeWhen>
+ </handler>
+ <handler
+ class="eu.etaxonomy.taxeditor.navigation.navigator.handler.RemotingDeleteTaxonNodeHandler"
+ commandId="eu.etaxonomy.taxeditor.navigation.command.delete">
+ <activeWhen>
+ <reference
+ definitionId="isRemoting">
+ </reference>
+ </activeWhen>
+ </handler>
+ <handler
+ class="eu.etaxonomy.taxeditor.navigation.key.polytomous.handler.RemotingDeletePolytomousKeyHandler"
+ commandId="eu.etaxonomy.taxeditor.navigation.key.polytomous.command.delete">
+ <activeWhen>
+ <reference
+ definitionId="isRemoting">
+ </reference>
+ </activeWhen>
+ </handler>
+ <handler
+ class="eu.etaxonomy.taxeditor.navigation.key.polytomous.handler.RemotingUpdatePolytomousKeyAllNodesHandler"
+ commandId="eu.etaxonomy.taxeditor.navigation.key.polytomous.refreshKeyNodes">
+ <activeWhen>
+ <reference
+ definitionId="isRemoting">
+ </reference>
+ </activeWhen>
+ </handler>
+ <handler
+ class="eu.etaxonomy.taxeditor.navigation.key.polytomous.handler.RemotingEditPolytomousKeyNodesHandler"
+ commandId="eu.etaxonomy.taxeditor.navigation.key.polytomous.editNodes">
+ <activeWhen>
+ <reference
+ definitionId="isRemoting">
+ </reference>
+ </activeWhen>
+ </handler>
</extension>
class="eu.etaxonomy.taxeditor.preference.CdmStorePropertyTester"
id="eu.etaxonomy.taxeditor.preference.CdmStorePropertyTester"
namespace="eu.etaxonomy.taxeditor.preference.CdmStorePropertyTester"
- properties="isCdmStoreConnected"
+ properties="isCdmStoreConnected,isRemoting,isStandAlone"
type="java.lang.Object">
</propertyTester>
</extension>
</test>
</with>
</definition>
+ <definition
+ id="isRemoting">
+ <test
+ property="eu.etaxonomy.taxeditor.preference.CdmStorePropertyTester.isRemoting">
+ </test>
+ </definition>
+ <definition
+ id="isStandAlone">
+ <test
+ property="eu.etaxonomy.taxeditor.preference.CdmStorePropertyTester.isStandAlone">
+ </test>
+ </definition>
</extension>
<extension
point="eu.etaxonomy.taxeditor.store.cdmViewer">
<parent>
<groupId>eu.etaxonomy</groupId>
<artifactId>taxeditor-parent</artifactId>
- <version>3.8.0-SNAPSHOT</version>
+ <version>3.12.0-SNAPSHOT</version>
</parent>
<modelVersion>4.0.0</modelVersion>
import eu.etaxonomy.taxeditor.model.MessagingUtils;
import eu.etaxonomy.taxeditor.navigation.internal.TaxeditorNavigationPlugin;
import eu.etaxonomy.taxeditor.navigation.navigator.TaxonNavigator;
+import eu.etaxonomy.taxeditor.store.internal.TaxeditorStorePlugin;
/**
* <p>NavigationUtil class.</p>
} catch (PartInitException e) {
MessagingUtils.error(NavigationUtil.class, "Error opening the editor", e);
} catch (Exception e) {
- MessagingUtils.warningDialog("Could not create Taxon", NavigationUtil.class, e.getMessage());
+ MessagingUtils.errorDialog("Could not create Taxon",
+ NavigationUtil.class,
+ e.getMessage(), TaxeditorStorePlugin.PLUGIN_ID,
+ e,
+ true);
+
}
}
--- /dev/null
+// $Id$
+/**
+* Copyright (C) 2015 EDIT
+* European Distributed Institute of Taxonomy
+* http://www.e-taxonomy.eu
+*
+* The contents of this file are subject to the Mozilla Public License Version 1.1
+* See LICENSE.TXT at the top of this package for the full license terms.
+*/
+package eu.etaxonomy.taxeditor.navigation.key.polytomous;
+
+/**
+ * @author cmathew
+ * @date 25 Jun 2015
+ *
+ */
+public interface PolytomousKeyViewLabels {
+
+ public static final String DELETE_POLYTOMOUS_KEY_LABEL = "Delete Polytomous Key";
+ public static final String UPDATE_ALL_POLYTOMOUS_KEY_NODES_LABEL = "Update All Polytomous Key Nodes";
+
+ public static final String ERROR_OPENING_KEY_EDITOR_MESSAGE = "Error opening Polytomous Key Editor";
+
+
+}
package eu.etaxonomy.taxeditor.navigation.key.polytomous;
import java.util.List;
+import java.util.Map;
import org.eclipse.core.commands.Command;
import org.eclipse.core.commands.common.NotDefinedException;
import org.eclipse.ui.handlers.IHandlerService;
import org.eclipse.ui.part.ViewPart;
+import eu.etaxonomy.cdm.api.application.CdmApplicationState;
+import eu.etaxonomy.cdm.api.application.CdmChangeEvent;
+import eu.etaxonomy.cdm.api.application.CdmChangeEvent.Action;
+import eu.etaxonomy.cdm.api.application.ICdmChangeListener;
import eu.etaxonomy.cdm.api.conversation.ConversationHolder;
import eu.etaxonomy.cdm.api.conversation.IConversationEnabled;
import eu.etaxonomy.cdm.api.service.IPolytomousKeyService;
import eu.etaxonomy.taxeditor.model.IContextListener;
import eu.etaxonomy.taxeditor.model.MessagingUtils;
import eu.etaxonomy.taxeditor.operation.IPostOperationEnabled;
+import eu.etaxonomy.taxeditor.session.ICdmEntitySession;
+import eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled;
import eu.etaxonomy.taxeditor.store.CdmStore;
import eu.etaxonomy.taxeditor.ui.element.CdmFormFactory;
*
*/
public class PolytomousKeyViewPart extends ViewPart implements
- IConversationEnabled, IPostOperationEnabled {
+ IConversationEnabled, ICdmEntitySessionEnabled, IPostOperationEnabled,
+ ICdmChangeListener {
private class FilterModifyListener implements ModifyListener{
@Override
private IContextListener contextListener;
private final CdmFormFactory formFactory;
private Text text_filter;
+ private ICdmEntitySession cdmEntitySession;
private PolytomousKeyViewPartDataChangeBehavior dataChangeBehavior;
private void setInput() {
conversation = CdmStore.createConversation();
conversation.registerForDataStoreChanges(this);
+ cdmEntitySession = CdmStore.getCurrentSessionManager().newSession(this, true);
+ CdmApplicationState.getCurrentDataChangeService().register(this);
+
List<PolytomousKey> input = CdmStore.getService(IPolytomousKeyService.class).list(PolytomousKey.class, null, null, null, null);
if(!viewer.getControl().isDisposed()){
viewer.setInput(input);
*/
@Override
public void setFocus() {
+ if(cdmEntitySession != null) {
+ cdmEntitySession.bind();
+ }
viewer.getControl().setFocus();
}
conversation.close();
CdmStore.getContextManager().removeContextListener(contextListener);
}
+ if(cdmEntitySession != null) {
+ cdmEntitySession.dispose();
+ }
+ CdmApplicationState.getCurrentDataChangeService().unregister(this);
super.dispose();
}
return (List<PolytomousKey>)viewer.getInput();
}
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled#getCdmEntitySession()
+ */
+ @Override
+ public ICdmEntitySession getCdmEntitySession() {
+ return cdmEntitySession;
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled#getRootEntities()
+ */
+ @Override
+ public List<PolytomousKey> getRootEntities() {
+ return getKeys();
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.cdm.api.application.ICdmChangeListener#onChange(eu.etaxonomy.cdm.api.application.CdmChangeEvent)
+ */
+ @Override
+ public void onChange(CdmChangeEvent event) {
+ if(event.getAction() == Action.Delete && PolytomousKey.class.equals(event.getEntityType())) {
+ refresh();
+ }
+
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled#getPropertyPathsMap()
+ */
+ @Override
+ public Map<Object, List<String>> getPropertyPathsMap() {
+ // TODO Auto-generated method stub
+ return null;
+ }
+
}
import org.eclipse.core.commands.ExecutionException;
import org.eclipse.core.commands.common.NotDefinedException;
import org.eclipse.jface.viewers.IStructuredSelection;
-import org.eclipse.ui.IEditorInput;
-import org.eclipse.ui.IEditorReference;
-import org.eclipse.ui.IWorkbenchPage;
-import org.eclipse.ui.PartInitException;
import org.eclipse.ui.handlers.HandlerUtil;
import eu.etaxonomy.cdm.model.description.PolytomousKey;
-import eu.etaxonomy.taxeditor.editor.key.polytomous.PolytomousKeyEditorInput;
import eu.etaxonomy.taxeditor.model.MessagingUtils;
import eu.etaxonomy.taxeditor.navigation.NavigationUtil;
import eu.etaxonomy.taxeditor.navigation.key.polytomous.PolytomousKeyViewPart;
*/
public class DeleteHandler extends AbstractHandler {
- protected IWorkbenchPage activePage;
/* (non-Javadoc)
* @see org.eclipse.core.commands.IHandler#execute(org.eclipse.core.commands.ExecutionEvent)
*/
@Override
public Object execute(ExecutionEvent event) throws ExecutionException {
IStructuredSelection selection = (IStructuredSelection) HandlerUtil.getCurrentSelection(event);
- activePage = HandlerUtil.getActiveWorkbenchWindow(event).getActivePage();
+
List<PolytomousKey> keys = selection.toList();
if(keys.isEmpty()){
return null;
}
- for (PolytomousKey key : keys){
- closeObsoleteEditor(key);
- }
- boolean confirmation = MessagingUtils.confirmDialog("Confirm deletion", "Do you want to delete the selected key" + (keys.size() == 1 ? "" : "s") + "?");
+
+ boolean confirmation = MessagingUtils.confirmDialog("Confirm deletaion", "Do you want to delete the selected key" + (keys.size() == 1 ? "" : "s") + "?");
if(confirmation){
for(PolytomousKey key : keys){
try {
+ PolytomousKeyViewPart pkvp = (PolytomousKeyViewPart) NavigationUtil.getView(PolytomousKeyViewPart.ID, false);
AbstractPostOperation operation = new DeleteOperation(
event.getCommand().getName(),
NavigationUtil.getUndoContext(), key,
- (PolytomousKeyViewPart) NavigationUtil.getView(PolytomousKeyViewPart.ID, false),
- (PolytomousKeyViewPart) NavigationUtil.getView(PolytomousKeyViewPart.ID, false));
+ pkvp,
+ pkvp,
+ pkvp);
NavigationUtil.executeOperation(operation);
} catch (NotDefinedException e) {
MessagingUtils.error(getClass(), e);
return null;
}
-
- protected boolean closeObsoleteEditor(PolytomousKey key){
- boolean result = true;
- for (IEditorReference ref : activePage.getEditorReferences()) {
- try {
-
- IEditorInput input = ref.getEditorInput();
- if (input instanceof PolytomousKeyEditorInput) {
- PolytomousKey pKey = ((PolytomousKeyEditorInput)input).getKey();
- //if node is a child of taxonNode then close the editor
- if(key.equals(pKey)){
- //if (taxonNode.equals(node)) {
- result &= activePage.closeEditor(ref.getEditor(false), true);
-
- }
- }
- } catch (PartInitException e) {
- continue;
- }
- }
- return result;
- }
}
--- /dev/null
+// $Id$
+/**
+* Copyright (C) 2015 EDIT
+* European Distributed Institute of Taxonomy
+* http://www.e-taxonomy.eu
+*
+* The contents of this file are subject to the Mozilla Public License Version 1.1
+* See LICENSE.TXT at the top of this package for the full license terms.
+*/
+package eu.etaxonomy.taxeditor.navigation.key.polytomous.handler;
+
+import java.util.List;
+import java.util.UUID;
+
+import org.eclipse.core.commands.ExecutionEvent;
+import org.eclipse.core.commands.operations.AbstractOperation;
+import org.eclipse.core.runtime.IStatus;
+import org.eclipse.core.runtime.Status;
+import org.eclipse.jface.viewers.IStructuredSelection;
+import org.eclipse.ui.handlers.HandlerUtil;
+
+import eu.etaxonomy.taxeditor.model.MessagingUtils;
+import eu.etaxonomy.taxeditor.navigation.key.polytomous.PolytomousKeyViewLabels;
+import eu.etaxonomy.taxeditor.navigation.key.polytomous.operation.RemotingDeletePolytomousKeyOperation;
+import eu.etaxonomy.taxeditor.operation.RemotingCdmHandler;
+import eu.etaxonomy.taxeditor.util.OperationsUtil;
+
+/**
+ * @author cmathew
+ * @date 25 Jun 2015
+ *
+ */
+public class RemotingDeletePolytomousKeyHandler extends RemotingCdmHandler {
+
+ List<UUID> keysToDelete;
+ /**
+ * @param label
+ */
+ public RemotingDeletePolytomousKeyHandler() {
+ super(PolytomousKeyViewLabels.DELETE_POLYTOMOUS_KEY_LABEL);
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.operation.RemotingCdmHandler#allowOperations(org.eclipse.core.commands.ExecutionEvent)
+ */
+ @Override
+ public IStatus allowOperations(ExecutionEvent event) {
+ IStructuredSelection selection = (IStructuredSelection) HandlerUtil.getCurrentSelection(event);
+
+ keysToDelete = OperationsUtil.convertToUuidList(selection.toList());
+
+ if(keysToDelete.isEmpty()){
+ return Status.CANCEL_STATUS;
+ }
+
+ boolean confirmation = MessagingUtils.confirmDialog("Confirm deletaion", "Do you want to delete the selected key" + (keysToDelete.size() == 1 ? "" : "s") + "?");
+
+ if(!confirmation) {
+ return Status.CANCEL_STATUS;
+ }
+ return Status.OK_STATUS;
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.operation.RemotingCdmHandler#prepareOperation(org.eclipse.core.commands.ExecutionEvent)
+ */
+ @Override
+ public AbstractOperation prepareOperation(ExecutionEvent event) {
+ return new RemotingDeletePolytomousKeyOperation(event.getTrigger(),
+ false,
+ keysToDelete);
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.operation.RemotingCdmHandler#onComplete()
+ */
+ @Override
+ public void onComplete() {
+ // TODO Auto-generated method stub
+
+ }
+
+}
--- /dev/null
+// $Id$
+/**
+* Copyright (C) 2015 EDIT
+* European Distributed Institute of Taxonomy
+* http://www.e-taxonomy.eu
+*
+* The contents of this file are subject to the Mozilla Public License Version 1.1
+* See LICENSE.TXT at the top of this package for the full license terms.
+*/
+package eu.etaxonomy.taxeditor.navigation.key.polytomous.handler;
+
+import org.eclipse.core.commands.AbstractHandler;
+import org.eclipse.core.commands.ExecutionEvent;
+import org.eclipse.core.commands.ExecutionException;
+import org.eclipse.core.runtime.IProgressMonitor;
+import org.eclipse.core.runtime.IStatus;
+import org.eclipse.core.runtime.Status;
+import org.eclipse.core.runtime.jobs.Job;
+import org.eclipse.jface.viewers.ISelection;
+import org.eclipse.jface.viewers.StructuredSelection;
+import org.eclipse.swt.widgets.Display;
+
+import eu.etaxonomy.cdm.model.description.PolytomousKey;
+import eu.etaxonomy.taxeditor.editor.EditorUtil;
+import eu.etaxonomy.taxeditor.model.MessagingUtils;
+import eu.etaxonomy.taxeditor.navigation.NavigationUtil;
+import eu.etaxonomy.taxeditor.navigation.key.polytomous.PolytomousKeyViewLabels;
+import eu.etaxonomy.taxeditor.navigation.key.polytomous.PolytomousKeyViewPart;
+
+/**
+ * @author cmathew
+ * @date 29 Jun 2015
+ *
+ */
+public class RemotingEditPolytomousKeyNodesHandler extends AbstractHandler {
+
+ /* (non-Javadoc)
+ * @see org.eclipse.core.commands.IHandler#execute(org.eclipse.core.commands.ExecutionEvent)
+ */
+ @Override
+ public Object execute(final ExecutionEvent event) throws ExecutionException {
+ PolytomousKeyViewPart view = (PolytomousKeyViewPart) NavigationUtil.getView(PolytomousKeyViewPart.ID, false);
+
+ ISelection selection = view.getSite().getSelectionProvider().getSelection();
+ if(selection instanceof StructuredSelection){
+
+ final StructuredSelection structuredSelection = (StructuredSelection) selection;
+
+ Job job = new Job("Opening Polytomous Keys"){
+
+ @Override
+ protected IStatus run(IProgressMonitor monitor) {
+ monitor.beginTask("Opening Polytomous Keys", structuredSelection.size());
+
+ for(final Object selectedObject : structuredSelection.toArray()){
+ if(selectedObject instanceof PolytomousKey){
+
+ Display.getDefault().asyncExec(new Runnable(){
+
+ @Override
+ public void run() {
+ try {
+ PolytomousKey key = (PolytomousKey) selectedObject;
+ EditorUtil.openPolytomousKey(key.getUuid());
+ } catch(Exception ex) {
+ MessagingUtils.warningDialog(PolytomousKeyViewLabels.ERROR_OPENING_KEY_EDITOR_MESSAGE,
+ event.getTrigger(),
+ ex.getLocalizedMessage());
+ ex.printStackTrace();
+ }
+ }
+
+ });
+ monitor.worked(1);
+ }
+ }
+ monitor.done();
+ return Status.OK_STATUS;
+ }
+
+ };
+
+ job.setPriority(Job.SHORT);
+ job.schedule();
+
+ }
+ return null;
+ }
+
+}
--- /dev/null
+// $Id$
+/**
+* Copyright (C) 2015 EDIT
+* European Distributed Institute of Taxonomy
+* http://www.e-taxonomy.eu
+*
+* The contents of this file are subject to the Mozilla Public License Version 1.1
+* See LICENSE.TXT at the top of this package for the full license terms.
+*/
+package eu.etaxonomy.taxeditor.navigation.key.polytomous.handler;
+
+import org.eclipse.core.commands.ExecutionEvent;
+import org.eclipse.core.commands.operations.AbstractOperation;
+import org.eclipse.core.runtime.IStatus;
+import org.eclipse.core.runtime.Status;
+
+import eu.etaxonomy.taxeditor.navigation.key.polytomous.PolytomousKeyViewLabels;
+import eu.etaxonomy.taxeditor.navigation.key.polytomous.operation.RemotingUpdatePolytomousKeyAllNodesOperation;
+import eu.etaxonomy.taxeditor.operation.RemotingCdmHandler;
+
+/**
+ * @author cmathew
+ * @date 29 Jun 2015
+ *
+ */
+public class RemotingUpdatePolytomousKeyAllNodesHandler extends RemotingCdmHandler {
+
+ /**
+ * @param label
+ */
+ public RemotingUpdatePolytomousKeyAllNodesHandler() {
+ super(PolytomousKeyViewLabels.UPDATE_ALL_POLYTOMOUS_KEY_NODES_LABEL);
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.operation.RemotingCdmHandler#allowOperations(org.eclipse.core.commands.ExecutionEvent)
+ */
+ @Override
+ public IStatus allowOperations(ExecutionEvent event) {
+ return Status.OK_STATUS;
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.operation.RemotingCdmHandler#prepareOperation(org.eclipse.core.commands.ExecutionEvent)
+ */
+ @Override
+ public AbstractOperation prepareOperation(ExecutionEvent event) {
+ return new RemotingUpdatePolytomousKeyAllNodesOperation(event.getTrigger(), false);
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.operation.RemotingCdmHandler#onComplete()
+ */
+ @Override
+ public void onComplete() {
+ // TODO Auto-generated method stub
+
+ }
+
+}
import eu.etaxonomy.cdm.model.description.PolytomousKey;
import eu.etaxonomy.taxeditor.operation.AbstractPersistentPostOperation;
import eu.etaxonomy.taxeditor.operation.IPostOperationEnabled;
+import eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled;
import eu.etaxonomy.taxeditor.store.CdmStore;
/**
public class DeleteOperation extends AbstractPersistentPostOperation {
private final PolytomousKey key;
+ private final ICdmEntitySessionEnabled cdmEntitySessionEnabled;
+
/**
* @param label
*/
public DeleteOperation(String label, IUndoContext undoContext,
PolytomousKey key,
- IPostOperationEnabled postOperationEnabled, IConversationEnabled conversationEnabled) {
- super(label, undoContext, postOperationEnabled, conversationEnabled);
+ IPostOperationEnabled postOperationEnabled,
+ IConversationEnabled conversationEnabled,
+ ICdmEntitySessionEnabled cdmEntitySessionEnabled) {
+ super(label, undoContext, postOperationEnabled, conversationEnabled, cdmEntitySessionEnabled);
this.key = key;
+ this.cdmEntitySessionEnabled = cdmEntitySessionEnabled;
}
@Override
bind();
DeleteResult result = CdmStore.getService(IPolytomousKeyService.class).delete(key);
+
if (result.isError() && !result.getExceptions().isEmpty()){
MessageDialog.openError(null, "Delete failed", result.getExceptions().iterator().next().getMessage());
--- /dev/null
+// $Id$
+/**
+* Copyright (C) 2015 EDIT
+* European Distributed Institute of Taxonomy
+* http://www.e-taxonomy.eu
+*
+* The contents of this file are subject to the Mozilla Public License Version 1.1
+* See LICENSE.TXT at the top of this package for the full license terms.
+*/
+package eu.etaxonomy.taxeditor.navigation.key.polytomous.operation;
+
+import java.util.List;
+import java.util.UUID;
+
+import org.eclipse.core.runtime.IAdaptable;
+import org.eclipse.core.runtime.IProgressMonitor;
+
+import eu.etaxonomy.cdm.api.application.CdmChangeEvent.Action;
+import eu.etaxonomy.cdm.api.service.IPolytomousKeyService;
+import eu.etaxonomy.cdm.api.service.UpdateResult;
+import eu.etaxonomy.cdm.model.description.PolytomousKey;
+import eu.etaxonomy.taxeditor.operation.RemotingCdmUpdateOperation;
+import eu.etaxonomy.taxeditor.store.CdmStore;
+
+/**
+ * @author cmathew
+ * @date 25 Jun 2015
+ *
+ */
+public class RemotingDeletePolytomousKeyOperation extends RemotingCdmUpdateOperation {
+
+ private final static String LABEL = "Delete Polytomous Key operation";
+
+ private final List<UUID> keysToDelete;
+ /**
+ * @param label
+ * @param action
+ * @param source
+ * @param async
+ */
+ public RemotingDeletePolytomousKeyOperation(Object source,
+ boolean async,
+ List<UUID> keysToDelete) {
+ super(LABEL, Action.Delete, source, async);
+ this.keysToDelete = keysToDelete;
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.operation.RemotingCdmUpdateOperation#doUpdateExecute(org.eclipse.core.runtime.IProgressMonitor, org.eclipse.core.runtime.IAdaptable)
+ */
+ @Override
+ protected UpdateResult doUpdateExecute(IProgressMonitor monitor, IAdaptable info) throws Exception {
+ entityType = PolytomousKey.class;
+ return CdmStore.getService(IPolytomousKeyService.class).delete(keysToDelete);
+ }
+
+}
--- /dev/null
+// $Id$
+/**
+* Copyright (C) 2015 EDIT
+* European Distributed Institute of Taxonomy
+* http://www.e-taxonomy.eu
+*
+* The contents of this file are subject to the Mozilla Public License Version 1.1
+* See LICENSE.TXT at the top of this package for the full license terms.
+*/
+package eu.etaxonomy.taxeditor.navigation.key.polytomous.operation;
+
+import java.util.UUID;
+
+import org.eclipse.core.runtime.IAdaptable;
+import org.eclipse.core.runtime.IProgressMonitor;
+
+import eu.etaxonomy.cdm.api.application.CdmChangeEvent.Action;
+import eu.etaxonomy.cdm.api.service.IPolytomousKeyService;
+import eu.etaxonomy.cdm.api.service.UpdateResult;
+import eu.etaxonomy.taxeditor.operation.RemotingCdmUpdateOperation;
+import eu.etaxonomy.taxeditor.store.CdmStore;
+
+/**
+ * @author cmathew
+ * @date 29 Jun 2015
+ *
+ */
+public class RemotingUpdatePolytomousKeyAllNodesOperation extends RemotingCdmUpdateOperation {
+
+ private final UUID polytomousKeyUuid;
+ /**
+ * @param label
+ * @param action
+ * @param source
+ * @param async
+ */
+ public RemotingUpdatePolytomousKeyAllNodesOperation(Object source,
+ boolean async,
+ UUID polytomousKeyUuid) {
+ super(LABEL, Action.Update, source, async);
+ this.polytomousKeyUuid = polytomousKeyUuid;
+
+ }
+
+ public RemotingUpdatePolytomousKeyAllNodesOperation(Object source,
+ boolean async) {
+ super(LABEL, Action.Update, source, async);
+ // this implies that we have to update all nodes of all keys
+ this.polytomousKeyUuid = null;
+ }
+
+ private final static String LABEL = "Update All Polytomous Key Nodes operation";
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.operation.RemotingCdmUpdateOperation#doUpdateExecute(org.eclipse.core.runtime.IProgressMonitor, org.eclipse.core.runtime.IAdaptable)
+ */
+ @Override
+ protected UpdateResult doUpdateExecute(IProgressMonitor monitor, IAdaptable info) throws Exception {
+ if(polytomousKeyUuid == null) {
+ return CdmStore.getService(IPolytomousKeyService.class).updateAllNodeNumberings();
+ } else {
+ return CdmStore.getService(IPolytomousKeyService.class).updateAllNodeNumberings(polytomousKeyUuid);
+ }
+ }
+
+}
// $Id$
/**
* Copyright (C) 2007 EDIT
-* European Distributed Institute of Taxonomy
+* European Distributed Institute of Taxonomy
* http://www.e-taxonomy.eu
-*
+*
* The contents of this file are subject to the Mozilla Public License Version 1.1
* See LICENSE.TXT at the top of this package for the full license terms.
*/
*/
public class Root extends PlatformObject implements IAdaptable, IPersistableElement, IElementFactory, IConversationEnabled {
- private ConversationHolder conversation;
-
+ private final ConversationHolder conversation;
+
/**
* <p>Constructor for Root.</p>
*
public Root (ConversationHolder conversation){
this.conversation = conversation;
}
-
+
/**
* <p>getParentBeans</p>
*
*/
public List<Classification> getParentBeans() {
List<String> propertyPaths = Arrays.asList(new String[]{"name"});
-
+
List<Classification> classifications = CdmStore.getService(IClassificationService.class).list(null, null, null, null, propertyPaths);
-
+
if(classifications.size() == 0){
Classification classification = Classification.NewInstance("My Classification");
- AbstractPostOperation operation = new CreateClassification("Creating initial classification", NavigationUtil.getUndoContext(), classification, NavigationUtil.getNavigator(false), NavigationUtil.getNavigator(false));
+ AbstractPostOperation operation = new CreateClassification("Creating initial classification", NavigationUtil.getUndoContext(), classification, NavigationUtil.getNavigator(false), NavigationUtil.getNavigator(false), NavigationUtil.getNavigator(false));
NavigationUtil.executeOperation(operation);
-
+
classifications = CdmStore.getService(IClassificationService.class).list(null, null, null, null, propertyPaths);
}
-
- return classifications;
+
+ return classifications;
}
/* (non-Javadoc)
*
* @return a {@link java.lang.String} object.
*/
- public String getFactoryId() {
+ @Override
+ public String getFactoryId() {
return null;
}
* @see org.eclipse.ui.IPersistable#saveState(org.eclipse.ui.IMemento)
*/
/** {@inheritDoc} */
- public void saveState(IMemento memento) {
+ @Override
+ public void saveState(IMemento memento) {
}
/* (non-Javadoc)
* @see org.eclipse.ui.IElementFactory#createElement(org.eclipse.ui.IMemento)
*/
/** {@inheritDoc} */
- public IAdaptable createElement(IMemento memento) {
+ @Override
+ public IAdaptable createElement(IMemento memento) {
return null;
}
// $Id$
/**
* Copyright (C) 2007 EDIT
-* European Distributed Institute of Taxonomy
+* European Distributed Institute of Taxonomy
* http://www.e-taxonomy.eu
-*
+*
* The contents of this file are subject to the Mozilla Public License Version 1.1
* See LICENSE.TXT at the top of this package for the full license terms.
*/
import org.eclipse.jface.viewers.IStructuredSelection;
import org.eclipse.jface.viewers.StructuredSelection;
import org.eclipse.ui.IEditorInput;
-import org.eclipse.ui.IEditorPart;
import org.eclipse.ui.IWorkbenchPage;
import org.eclipse.ui.navigator.ILinkHelper;
/** Constant <code>ID="eu.etaxonomy.taxeditor.navigation.taxon"{trunked}</code> */
public static final String ID = "eu.etaxonomy.taxeditor.navigation.taxonlinkhelper"; //$NON-NLS-1$
-
+
/* (non-Javadoc)
* @see org.eclipse.ui.navigator.ILinkHelper#activateEditor(org.eclipse.ui.IWorkbenchPage, org.eclipse.jface.viewers.IStructuredSelection)
*/
/** {@inheritDoc} */
- public void activateEditor(IWorkbenchPage page,
+ @Override
+ public void activateEditor(IWorkbenchPage page,
IStructuredSelection selection) {
try {
if (selection == null || selection.isEmpty()) {
return;
}
- if (selection.getFirstElement() instanceof TaxonNode) {
- TaxonNode taxonNode = (TaxonNode) selection.getFirstElement();
- TaxonEditorInput taxonEditorInput;
-
- taxonEditorInput = TaxonEditorInput.NewInstance(taxonNode.getUuid());
-
- IEditorPart editor = null;
- if ((editor = page.findEditor(taxonEditorInput)) != null) {
- page.bringToTop(editor);
- }
- }
+// if (selection.getFirstElement() instanceof TaxonNode) {
+// TaxonNode taxonNode = (TaxonNode) selection.getFirstElement();
+// TaxonEditorInput taxonEditorInput;
+//
+// taxonEditorInput = TaxonEditorInput.NewInstance(taxonNode.getUuid());
+//
+// IEditorPart editor = null;
+// if ((editor = page.findEditor(taxonEditorInput)) != null) {
+// page.bringToTop(editor);
+// }
+// }
} catch (Exception e) {
MessagingUtils.warningDialog("Could not create Taxon", this, e.getMessage());
}
* @see org.eclipse.ui.navigator.ILinkHelper#findSelection(org.eclipse.ui.IEditorInput)
*/
/** {@inheritDoc} */
- public IStructuredSelection findSelection(IEditorInput editorInput) {
+ @Override
+ public IStructuredSelection findSelection(IEditorInput editorInput) {
if (editorInput instanceof TaxonEditorInput) {
TaxonNode taxonNode = ((TaxonEditorInput) editorInput).getTaxonNode();
if (taxonNode != null) {
package eu.etaxonomy.taxeditor.navigation.navigator;
import java.util.ArrayList;
+import java.util.Arrays;
import java.util.Comparator;
+import java.util.HashMap;
import java.util.HashSet;
import java.util.List;
+import java.util.Map;
import java.util.Observable;
import java.util.Observer;
import java.util.Set;
import org.eclipse.ui.PartInitException;
import org.eclipse.ui.navigator.CommonNavigator;
+import eu.etaxonomy.cdm.api.application.CdmApplicationState;
+import eu.etaxonomy.cdm.api.application.CdmChangeEvent;
+import eu.etaxonomy.cdm.api.application.CdmChangeEvent.Action;
+import eu.etaxonomy.cdm.api.application.ICdmChangeListener;
import eu.etaxonomy.cdm.api.conversation.ConversationHolder;
import eu.etaxonomy.cdm.api.conversation.IConversationEnabled;
import eu.etaxonomy.cdm.api.service.IClassificationService;
import eu.etaxonomy.cdm.model.common.CdmBase;
+import eu.etaxonomy.cdm.model.taxon.Classification;
import eu.etaxonomy.cdm.model.taxon.TaxonNaturalComparator;
import eu.etaxonomy.cdm.model.taxon.TaxonNode;
import eu.etaxonomy.cdm.model.taxon.TaxonNodeByRankAndNameComparator;
import eu.etaxonomy.taxeditor.navigation.NavigationUtil;
import eu.etaxonomy.taxeditor.operation.IPostOperationEnabled;
import eu.etaxonomy.taxeditor.preference.PreferencesUtil;
+import eu.etaxonomy.taxeditor.session.ICdmEntitySession;
+import eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled;
import eu.etaxonomy.taxeditor.store.CdmStore;
import eu.etaxonomy.taxeditor.store.LoginManager;
* @version 1.0
*/
public class TaxonNavigator extends CommonNavigator implements
- IPostOperationEnabled, IConversationEnabled, Observer {
+ IPostOperationEnabled, IConversationEnabled, Observer,
+ ICdmEntitySessionEnabled, ICdmChangeListener {
/**
* Constant
private ConversationHolder conversation;
+ private ICdmEntitySession cdmEntitySession;
+
private String partNameCache;
private IDataChangeBehavior dataChangeBehavior;
+ private Root root;
+
/*
* (non-Javadoc)
*
// we do not preserve state. Closing the view, in contrary to
// closing the whole application
// should be handled by the state manager too
-
- return new Root(conversation);
+ root = new Root(conversation);
+ return root;
}
return new EmptyRoot();
}
* </p>
*/
public void init() {
+
if (CdmStore.isActive() && conversation == null) {
conversation = CdmStore.createConversation();
conversation.registerForDataStoreChanges(TaxonNavigator.this);
}
+ if (CdmStore.isActive()) {
+ cdmEntitySession = CdmStore.getCurrentSessionManager().newSession(this, true);
+ CdmApplicationState.getCurrentDataChangeService().register(this);
+ }
CdmStore.getLoginManager().addObserver(this);
}
getCommonViewer().refresh();
}
+ /**
+ * Refresh this navigators viewer
+ */
+ public void refresh(Set objects) {
+ for(Object obj : objects) {
+ getCommonViewer().refresh(obj);
+ }
+ }
+
/**
* Removes all content
*/
* a {@link org.eclipse.core.runtime.IProgressMonitor} object.
*/
public void restore(IMemento memento, IProgressMonitor monitor) {
+ root = new Root(conversation);
if (memento == null) {
- getCommonViewer().setInput(new Root(conversation));
+ getCommonViewer().setInput(root);
return;
}
int mementoWork = 0;
subProgressMonitor.worked(1);
conversation.registerForDataStoreChanges(TaxonNavigator.this);
subProgressMonitor.worked(1);
- getCommonViewer().setInput(new Root(conversation));
+ getCommonViewer().setInput(root);
subProgressMonitor.worked(1);
getCommonViewer().refresh();
subProgressMonitor.worked(1);
if (conversation != null) {
conversation.unregisterForDataStoreChanges(this);
}
+ if(cdmEntitySession != null) {
+ cdmEntitySession.dispose();
+ }
+ if(CdmApplicationState.getCurrentDataChangeService() != null) {
+ CdmApplicationState.getCurrentDataChangeService().unregister(this);
+ }
}
/*
if (getConversationHolder() != null) {
getConversationHolder().bind();
}
+ if(cdmEntitySession != null) {
+ cdmEntitySession.bind();
+ }
}
/*
}
}
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled#getCdmEntitySession()
+ */
+ @Override
+ public ICdmEntitySession getCdmEntitySession() {
+ return cdmEntitySession;
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled#getRootEntities()
+ */
+ @Override
+ public List<Classification> getRootEntities() {
+ if(root != null) {
+ return root.getParentBeans();
+ }
+ return null;
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.cdm.api.application.ICdmChangeListener#onChange(eu.etaxonomy.cdm.api.application.CdmChangeEvent)
+ */
+ @Override
+ public void onChange(CdmChangeEvent event) {
+ if(event.getAction() == Action.Delete && Classification.class.equals(event.getEntityType())) {
+ refresh();
+ return;
+ }
+ for(CdmBase cb : event.getChangedObjects()) {
+ if(cb instanceof TaxonNode) {
+ TaxonNode tn = (TaxonNode)cb;
+ if(tn.getTaxon() == null) {
+ getCommonViewer().refresh(tn.getClassification());
+ } else {
+ getCommonViewer().refresh(cb);
+ }
+ } else if (cb instanceof Classification) {
+ getCommonViewer().refresh();
+ }
+ }
+
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled#getPropertyPathsMap()
+ */
+ @Override
+ public Map<Object, List<String>> getPropertyPathsMap() {
+ Map<Object, List<String>> propertyPathsMap = new HashMap<Object, List<String>>();
+ List<String> taxonNodePropertyPaths = Arrays.asList(new String[] {
+ "taxon.name"
+ });
+ propertyPathsMap.put("childNodes", taxonNodePropertyPaths);
+ return propertyPathsMap;
+ }
}
/**
* Copyright (C) 2007 EDIT
-* European Distributed Institute of Taxonomy
+* European Distributed Institute of Taxonomy
* http://www.e-taxonomy.eu
-*
+*
* The contents of this file are subject to the Mozilla Public License Version 1.1
* See LICENSE.TXT at the top of this package for the full license terms.
*/
import org.eclipse.swt.widgets.Display;
import org.eclipse.ui.IEditorPart;
+import eu.etaxonomy.cdm.hibernate.HibernateProxyHelper;
import eu.etaxonomy.cdm.model.common.CdmBase;
import eu.etaxonomy.cdm.model.name.TaxonNameBase;
import eu.etaxonomy.cdm.model.taxon.ITaxonTreeNode;
import eu.etaxonomy.cdm.persistence.hibernate.CdmDataChangeEvent;
import eu.etaxonomy.cdm.persistence.hibernate.CdmDataChangeEvent.EventType;
import eu.etaxonomy.cdm.persistence.hibernate.CdmDataChangeMap;
-import eu.etaxonomy.taxeditor.editor.TaxonEditorInput;
import eu.etaxonomy.taxeditor.model.AbstractDataChangeBehaviour;
import eu.etaxonomy.taxeditor.model.IDataChangeBehavior;
import eu.etaxonomy.taxeditor.navigation.NavigationUtil;
* @created 01.04.2009
* @version 1.0
*/
-public class TaxonNavigatorDataChangeBehavior extends AbstractDataChangeBehaviour implements
+public class TaxonNavigatorDataChangeBehavior extends AbstractDataChangeBehaviour implements
IDataChangeBehavior {
- private TaxonNavigator source;
+ private final TaxonNavigator source;
private Set<CdmBase> staleObjects;
-
+
/**
* <p>Constructor for TaxonNavigatorDataChangeBehavior.</p>
*
public TaxonNavigatorDataChangeBehavior(TaxonNavigator taxonNavigator) {
source = taxonNavigator;
}
-
+
/* (non-Javadoc)
* @see eu.etaxonomy.taxeditor.store.model.IDataChangeBehavior#isRelevant(java.lang.Object, eu.etaxonomy.cdm.persistence.hibernate.CdmCrudEvent)
*/
* @return a boolean.
*/
public boolean isRelevant(CdmDataChangeMap events) {
-
+
// TODO react only on insert/update/delete of taxon and synonym objects
// and on update of name objects
boolean relevant = false;
staleObjects = new HashSet<CdmBase>();
-
+
for(CdmDataChangeEvent event : events.getAllEvents()){
EventType eventType = event.getEventType();
CdmBase eventEntity = event.getEntity();
-
+
+ Set<CdmBase> affectedObjects = event.getAffectedObjects();
+ if(affectedObjects != null) {
+ for(CdmBase cb : affectedObjects) {
+ staleObjects.add((CdmBase)HibernateProxyHelper.deproxy(cb));
+ }
+ }
+
// all tree node changes are relevant
- if((eventType == EventType.INSERT || eventType == EventType.DELETE || eventType == EventType.UPDATE)
+ if((eventType == EventType.INSERT || eventType == EventType.DELETE || eventType == EventType.UPDATE)
&& event.getEntity() instanceof ITaxonTreeNode){
return true;
}
-
+
// name updates of the accepted taxon of open editors are relevant
if(eventType == EventType.UPDATE && event.getEntity() instanceof TaxonNameBase){
TaxonNameBase name = null;
}else{
continue;
}
-
+
Set<IEditorPart> openEditors = NavigationUtil.getOpenEditors();
/*for(IEditorPart editor : openEditors){
-
+
if(name.equals(((TaxonEditorInput) editor.getEditorInput()).getTaxon().getName())){
return true;
}
if (eventType == EventType.DELETE){
return true;
}
-
+
+
+
if(eventType == EventType.UPDATE && event.getEntity() instanceof Taxon){
TaxonNameBase name = null;
if(eventEntity instanceof Taxon){
}else{
continue;
}
-
- Set<IEditorPart> openEditors = NavigationUtil.getOpenEditors();
+
+ // Set<IEditorPart> openEditors = NavigationUtil.getOpenEditors();
/*for(IEditorPart editor : openEditors){
-
+
if(name.equals(((TaxonEditorInput) editor.getEditorInput()).getTaxon().getName())){
return true;
}
}*/
}
-
+
// if(eventType == EventType.UPDATE){
// relevant = true;
// CdmBase entity = event.getEntity();
// }
// }
}
-
+
return false;
-
+
// @deprecated
// react on everything except load
// if(events.sizeByEventType(EventType.INSERT) > 0){
final Display display = Display.getCurrent();
Job job = new Job("Updating Taxon Navigator") {
-
+
@Override
protected IStatus run(IProgressMonitor monitor) {
monitor.beginTask("Updating Taxon Navigator", 3);
monitor.worked(1);
-
+
// clear the session completely
monitor.subTask("Clearing Taxon Navigators session");
display.asyncExec(new Runnable() {
public void run() {
source.getConversationHolder().clear();
}
- });
- // FIXME completely clearing the session is a brute force approach.
+ });
+ // FIXME completely clearing the session is a brute force approach.
// It would be much more elegant to clear only those elements that have been changed.
// I could not get that to work but we should consider workin on this because we might
// run into serious performance issues, especially when it comes to large trees
// at least, we moved this to a job so it can run in a background thred
// seems to improve the situation but not sure if final solution
monitor.worked(1);
-
+
monitor.subTask("Refreshing viewer");
-
+
display.asyncExec(new Runnable() {
@Override
public void run() {
- source.refresh();
+ if(staleObjects != null && staleObjects.size() > 0) {
+ source.refresh(staleObjects);
+ } else {
+ source.refresh();
+ }
}
});
-
-
-
+
+
+
monitor.worked(1);
monitor.done();
return Status.OK_STATUS;
}
};
-
+
job.setPriority(Job.SHORT);
job.schedule();
-
+
}
}
}
--- /dev/null
+// $Id$
+/**
+* Copyright (C) 2015 EDIT
+* European Distributed Institute of Taxonomy
+* http://www.e-taxonomy.eu
+*
+* The contents of this file are subject to the Mozilla Public License Version 1.1
+* See LICENSE.TXT at the top of this package for the full license terms.
+*/
+package eu.etaxonomy.taxeditor.navigation.navigator;
+
+/**
+ * @author cmathew
+ * @date 19 Jun 2015
+ *
+ */
+public interface TaxonNavigatorLabels {
+
+ public static final String CHANGE_ACCEPTED_TAXON_TO_SYNONYM_LABEL = "Change Accepted Taxon to Synonym";
+ public static final String MOVE_TAXON_LABEL = "Move Taxon";
+ public static final String MOVE_FACTUAL_DATA_LABEL = "Move Factual Data";
+ public static final String DELETE_TAXON_NODE_LABEL = "Delete Taxon Node";
+
+ public static final String NO_TAXON_SELECTION_MESSAGE = "No taxon tree node selected for operation.";
+ public static final String SINGLE_TAXON_SELECTION_MESSAGE = "The chosen operation is available only for a single taxon.";
+ public static final String SOURCE_TAXON_HAS_CHILDREN_MESSAGE = "The chosen taxon must not have any childen. You need to move all childen to " +
+ "another taxon node in the TaxonNavigator before attempting to turn the accepted " +
+ "taxon into a synonym.";
+ public static final String RELATED_EDITOR_NOT_CLOSED_MESSAGE = "Could not close related taxon name editor. " +
+ "Please close it manually and try again.";
+ public static final String SELECTED_OBJECT_NOT_TREE_NODE_MESSAGE = "Selected object is not a taxon tree node";
+ public static final String UNSAVED_CHANGES_MESSAGE = "There are unsaved changes in the source taxon. Please save first.";
+
+
+
+}
import java.util.UUID;
import org.apache.log4j.Logger;
+import org.eclipse.core.commands.operations.AbstractOperation;
import org.eclipse.core.commands.operations.IUndoContext;
import org.eclipse.core.runtime.IStatus;
import org.eclipse.core.runtime.Status;
import eu.etaxonomy.cdm.persistence.hibernate.permission.CRUD;
import eu.etaxonomy.taxeditor.navigation.NavigationUtil;
import eu.etaxonomy.taxeditor.navigation.navigator.operation.MoveTaxonOperation;
+import eu.etaxonomy.taxeditor.navigation.navigator.operation.RemotingMoveTaxonOperation;
import eu.etaxonomy.taxeditor.operation.AbstractPostOperation;
import eu.etaxonomy.taxeditor.operation.IPostOperationEnabled;
import eu.etaxonomy.taxeditor.preference.PreferencesUtil;
return Status.CANCEL_STATUS;
}
- AbstractPostOperation operation = new MoveTaxonOperation
- ("Move Taxon", workspaceUndoContext, uuids, targetITaxonTreeNode, this, taxonNavigator, true);
- NavigationUtil.executeOperation(operation);
+ if(CdmStore.getCurrentSessionManager().isRemoting()) {
+ AbstractOperation operation = new RemotingMoveTaxonOperation(taxonNavigator, false, uuids, (TaxonNode)targetITaxonTreeNode, true);
+ NavigationUtil.executeOperation(operation, null);
+ } else {
+ AbstractPostOperation operation = new MoveTaxonOperation
+ ("Move Taxon", workspaceUndoContext, uuids, targetITaxonTreeNode, this, taxonNavigator, true);
+ NavigationUtil.executeOperation(operation);
+ }
logger.info("Moved taxa to new parent " + targetITaxonTreeNode);
return Status.OK_STATUS;
return Status.CANCEL_STATUS;
}
- AbstractPostOperation operation = new MoveTaxonOperation
- ("Move Taxon", workspaceUndoContext, uuids, targetITaxonTreeNode, this, taxonNavigator, true);
- NavigationUtil.executeOperation(operation);
+ if(CdmStore.getCurrentSessionManager().isRemoting()) {
+ AbstractOperation operation = new RemotingMoveTaxonOperation(taxonNavigator, false, uuids, (TaxonNode)targetITaxonTreeNode, true);
+ NavigationUtil.executeOperation(operation, null);
+ } else {
+ AbstractPostOperation operation = new MoveTaxonOperation
+ ("Move Taxon", workspaceUndoContext, uuids, targetITaxonTreeNode, this, taxonNavigator, true);
+ NavigationUtil.executeOperation(operation);
+ }
logger.info("Moved taxa to new parent " + targetITaxonTreeNode);
return Status.OK_STATUS;
return Status.CANCEL_STATUS;
}
TaxonNode targetNode = (TaxonNode) targetITaxonTreeNode;
- AbstractPostOperation operation = new MoveTaxonOperation
- ("Move Taxon", workspaceUndoContext, uuids, targetNode.getParent(), this, taxonNavigator, false);
- NavigationUtil.executeOperation(operation);
+ if(CdmStore.getCurrentSessionManager().isRemoting()) {
+ AbstractOperation operation = new RemotingMoveTaxonOperation(taxonNavigator, false, uuids, targetNode.getParent(), true);
+ NavigationUtil.executeOperation(operation, null);
+ } else {
+ AbstractPostOperation operation = new MoveTaxonOperation
+ ("Move Taxon", workspaceUndoContext, uuids, targetNode.getParent(), this, taxonNavigator, false);
+ NavigationUtil.executeOperation(operation);
+ }
logger.info("Moved taxa to new parent " + targetITaxonTreeNode);
return Status.OK_STATUS;
} else{
/**
- *
+ *
*/
package eu.etaxonomy.taxeditor.navigation.navigator.handler;
import java.util.UUID;
import org.apache.log4j.Logger;
-import org.eclipse.core.commands.AbstractHandler;
import org.eclipse.core.commands.ExecutionEvent;
import org.eclipse.core.commands.ExecutionException;
import org.eclipse.core.commands.IHandler;
import org.eclipse.core.commands.common.NotDefinedException;
-import org.eclipse.core.commands.operations.IUndoContext;
import org.eclipse.jface.dialogs.MessageDialog;
import org.eclipse.jface.viewers.TreeSelection;
import org.eclipse.swt.widgets.Display;
import org.eclipse.ui.PartInitException;
import org.eclipse.ui.handlers.HandlerUtil;
-import eu.etaxonomy.cdm.api.conversation.IConversationEnabled;
-import eu.etaxonomy.cdm.api.service.config.TaxonDeletionConfigurator;
import eu.etaxonomy.cdm.model.common.CdmBase;
-import eu.etaxonomy.cdm.model.taxon.Classification;
import eu.etaxonomy.cdm.model.taxon.ITaxonTreeNode;
import eu.etaxonomy.cdm.model.taxon.TaxonNode;
import eu.etaxonomy.taxeditor.editor.EditorUtil;
import eu.etaxonomy.taxeditor.editor.MultiPageTaxonEditor;
-import eu.etaxonomy.taxeditor.editor.Page;
-import eu.etaxonomy.taxeditor.editor.TaxonEditorInput;
import eu.etaxonomy.taxeditor.editor.name.TaxonNameEditor;
import eu.etaxonomy.taxeditor.model.MessagingUtils;
import eu.etaxonomy.taxeditor.navigation.NavigationUtil;
import eu.etaxonomy.taxeditor.navigation.navigator.operation.ChangeAcceptedTaxonToSynonymOperation;
-import eu.etaxonomy.taxeditor.navigation.navigator.operation.DeleteOperation;
import eu.etaxonomy.taxeditor.operation.AbstractPostOperation;
import eu.etaxonomy.taxeditor.operation.IPostOperationEnabled;
import eu.etaxonomy.taxeditor.ui.dialog.selection.TaxonNodeSelectionDialog;
private UUID newAcceptedTaxonNodeUuid;
private TaxonNameEditor editor;
-
+
/* (non-Javadoc)
* @see org.eclipse.core.commands.IHandler#execute(org.eclipse.core.commands.ExecutionEvent)
*/
/** {@inheritDoc} */
- public Object execute(ExecutionEvent event) throws ExecutionException {
-
-
+ @Override
+ public Object execute(ExecutionEvent event) throws ExecutionException {
+
+
activePage = HandlerUtil.getActiveWorkbenchWindow(event).getActivePage();
taxonNavigator = NavigationUtil.showNavigator();
String plural = selection.size() > 1 ? "s" : "";
// Prompt user for confirmation
-
-
+
+
Iterator selectionIterator = selection.iterator();
Set<ITaxonTreeNode> treeNodes = new HashSet<ITaxonTreeNode>();
AbstractPostOperation operation = null;
if (treeNodes.size() == 1 ){
try {
-
+
ITaxonTreeNode treeNode = treeNodes.iterator().next();
ITaxonTreeNode oldAcceptedTaxonNode =treeNode;
-
+
// check if taxon has no children
if(((TaxonNode)oldAcceptedTaxonNode).getCountChildren() > 0) {
- MessagingUtils.warningDialog("Prerequisite not met", this,
+ MessagingUtils.warningDialog("Prerequisite not met", this,
"The accepted taxon must not have any childen. You need to move all childen to " +
"another taxon node in the TaxonNavigator before attempting to turn the accepted " +
"taxon into a synonym.");
return null;
}
/*if(((TaxonNode)oldAcceptedTaxonNode).getTaxon().hasSynonyms()) {
- EditorUtil.warningDialog("Prerequisite not met", this,
+ EditorUtil.warningDialog("Prerequisite not met", this,
"The accepted taxon must not have any synonyms. You need to move all synonyms to " +
"another taxon before attempting to turn the accepted " +
"taxon into a synonym.");
return null;
}*/
-
+
List<UUID> excludeTaxa = new ArrayList<UUID>();
excludeTaxa.add(oldAcceptedTaxonNode.getUuid());
- TaxonNode newAcceptedTaxonNode = TaxonNodeSelectionDialog.select(HandlerUtil.getActiveShell(event),
- taxonNavigator.getConversationHolder(),
- "Choose the accepted taxon",
- excludeTaxa,
- null,
- ((TaxonNode)oldAcceptedTaxonNode).getClassification());
+ TaxonNode newAcceptedTaxonNode = TaxonNodeSelectionDialog.select(HandlerUtil.getActiveShell(event),
+ taxonNavigator.getConversationHolder(),
+ "Choose the accepted taxon",
+ excludeTaxa,
+ null,
+ ((TaxonNode)oldAcceptedTaxonNode).getClassification());
if (newAcceptedTaxonNode == null) {
return null;
}
-
+
if (allEditorsClosed){
-
- operation = new ChangeAcceptedTaxonToSynonymOperation(event.getCommand().getName(), NavigationUtil.getUndoContext(), oldAcceptedTaxonNode, newAcceptedTaxonNode,
- taxonNavigator, taxonNavigator);
-
+
+ operation = new ChangeAcceptedTaxonToSynonymOperation(event.getCommand().getName(),
+ NavigationUtil.getUndoContext(),
+ oldAcceptedTaxonNode,
+ newAcceptedTaxonNode,
+ taxonNavigator,
+ taxonNavigator,
+ taxonNavigator);
+
NavigationUtil.executeOperation(operation);
//}
}
-
-
-
+
+
+
} catch (NotDefinedException e) {
MessagingUtils.warn(getClass(), "Command name not set");
}
return null;
}
}
-
-
+
+
return null;
-
+
}
/* (non-Javadoc)
* @see eu.etaxonomy.taxeditor.operations.IPostOperationEnabled#postOperation(eu.etaxonomy.cdm.model.common.CdmBase)
*/
/** {@inheritDoc} */
- public boolean postOperation(CdmBase objectAffectedByOperation) {
+ @Override
+ public boolean postOperation(CdmBase objectAffectedByOperation) {
Display.getDefault().asyncExec(new Runnable(){
- public void run() {
+ @Override
+ public void run() {
EditorUtil.close(editor.getMultiPageTaxonEditor());
-
+
try {
MultiPageTaxonEditor possibleOpenEditor = (MultiPageTaxonEditor) EditorUtil.findEditorByTaxonNodeUuid(newAcceptedTaxonNodeUuid);
if(possibleOpenEditor != null){
MessagingUtils.warningDialog("Could not create Taxon", this, e.getMessage());
}
}
-
+
});
-
-
+
+
return true;
}
*
* @return a boolean.
*/
- public boolean onComplete() {
+ @Override
+ public boolean onComplete() {
// TODO Auto-generated method stub
return false;
- }
+ }
}
import eu.etaxonomy.cdm.model.taxon.ITaxonTreeNode;
import eu.etaxonomy.cdm.model.taxon.TaxonNode;
import eu.etaxonomy.taxeditor.editor.TaxonEditorInput;
-import eu.etaxonomy.taxeditor.model.AbstractUtility;
import eu.etaxonomy.taxeditor.model.MessagingUtils;
import eu.etaxonomy.taxeditor.navigation.NavigationUtil;
import eu.etaxonomy.taxeditor.navigation.navigator.TaxonNavigator;
TreeSelection selection = (TreeSelection) HandlerUtil.getCurrentSelection(event);
+
+ String plural = selection.size() > 1 ? "s" : "";
+ // Prompt user for confirmation
+
+
+
Iterator selectionIterator = selection.iterator();
Set<ITaxonTreeNode> treeNodes = new HashSet<ITaxonTreeNode>();
/*if(! MessageDialog.openConfirm(HandlerUtil.getActiveShell(event), "Confirm Deletion", "Do you really want to delete the selected nodes?")){
return null;
}*/
- operation = new DeleteOperation(
- event.getCommand().getName(), NavigationUtil.getUndoContext(),
- taxonNode, config, taxonNavigator, taxonNavigator);
- AbstractUtility.executeOperation(operation);
+ operation = new DeleteOperation(event.getCommand().getName(),
+ NavigationUtil.getUndoContext(),
+ taxonNode,
+ config,
+ taxonNavigator,
+ taxonNavigator,
+ taxonNavigator);
+
+ NavigationUtil.executeOperation(operation);
+
//}
}
return null;
}
if (allEditorsClosed){
- operation = new DeleteOperation(
- event.getCommand().getName(), NavigationUtil.getUndoContext(),
- treeNodes, new TaxonDeletionConfigurator(), taxonNavigator, taxonNavigator);
- AbstractUtility.executeOperation(operation);
+ operation = new DeleteOperation(event.getCommand().getName(),
+ NavigationUtil.getUndoContext(),
+ treeNodes,
+ new TaxonDeletionConfigurator(),
+ taxonNavigator,
+ taxonNavigator,
+ taxonNavigator);
+
+ NavigationUtil.executeOperation(operation);
+
}
}catch (NotDefinedException e) {
MessagingUtils.warn(getClass(), "Command name not set");
import java.util.List;
import java.util.UUID;
-import org.apache.commons.lang.StringUtils;
import org.apache.log4j.Logger;
import org.eclipse.core.commands.AbstractHandler;
import org.eclipse.core.commands.ExecutionEvent;
import eu.etaxonomy.cdm.api.service.ITaxonNodeService;
import eu.etaxonomy.cdm.api.service.ITaxonService;
import eu.etaxonomy.cdm.hibernate.HibernateProxyHelper;
-import eu.etaxonomy.cdm.model.common.Annotation;
-import eu.etaxonomy.cdm.model.common.AnnotationType;
-import eu.etaxonomy.cdm.model.common.Language;
-import eu.etaxonomy.cdm.model.description.TaxonDescription;
import eu.etaxonomy.cdm.model.taxon.Taxon;
import eu.etaxonomy.cdm.model.taxon.TaxonNode;
import eu.etaxonomy.taxeditor.editor.EditorUtil;
navigator.getConversationHolder(),
"Choose the accepted taxon",
excludeTaxa,
- null,
- null);
+ sourceTaxonNode,
+ sourceTaxonNode.getClassification());
if (dialogTaxonNode == null) {
return null;
}
"changes in the target taxon. Please save first.");
return null;
}
- for(TaxonDescription description : taxon.getDescriptions()){
- //reload to avoid session conflicts
- description = HibernateProxyHelper.deproxy(CdmStore.getService(IDescriptionService.class).load(description.getUuid()), TaxonDescription.class);
+ CdmStore.getService(IDescriptionService.class).moveTaxonDescriptions(taxon.getUuid(),targetTaxonNode.getTaxon().getUuid());
- String moveMessage = String.format("Description moved from %s", taxon);
- if(description.isProtectedTitleCache()){
- String separator = "";
- if(!StringUtils.isBlank(description.getTitleCache())){
- separator = " - ";
- }
- description.setTitleCache(description.getTitleCache() + separator + moveMessage, true);
- }
- Annotation annotation = Annotation.NewInstance(moveMessage, Language.getDefaultLanguage());
- annotation.setAnnotationType(AnnotationType.TECHNICAL());
- description.addAnnotation(annotation);
- targetTaxonNode.getTaxon().addDescription(description);
- CdmStore.getService(IDescriptionService.class).saveOrUpdate(description);
- navigator.getConversationHolder().bind();
- navigator.getConversationHolder().commit();
- }
+ navigator.getConversationHolder().bind();
+ navigator.getConversationHolder().commit();
Display.getDefault().asyncExec(new Runnable(){
import eu.etaxonomy.cdm.hibernate.HibernateProxyHelper;
import eu.etaxonomy.cdm.model.common.CdmBase;
+import eu.etaxonomy.cdm.model.taxon.Classification;
import eu.etaxonomy.cdm.model.taxon.TaxonNode;
import eu.etaxonomy.taxeditor.navigation.NavigationUtil;
import eu.etaxonomy.taxeditor.navigation.navigator.TaxonNavigator;
// TaxonNode taxonNode = (TaxonNode) selection.getFirstElement();
if (taxonNodes.size() >= 1){
+ Classification classification = taxonNodes.iterator().next().getClassification();
boolean moveToNewParent = true;
if (PreferencesUtil.getSortNodesNaturally()){
if(!MessageDialog.openQuestion(null, "Target node", "The choosen target node should be the parent?")){
moveToNewParent = false;
}
- parentTaxonNode = TaxonNodeSelectionDialog.select(HandlerUtil.getActiveShell(event), taxonNavigator.getConversationHolder(), "Choose the taxon above the moved taxon.", excludeTaxa, null, null);
+ parentTaxonNode = TaxonNodeSelectionDialog.select(HandlerUtil.getActiveShell(event), taxonNavigator.getConversationHolder(), "Choose the taxon above the moved taxon.", excludeTaxa, null, classification);
}else{
- parentTaxonNode = TaxonNodeSelectionDialog.select(HandlerUtil.getActiveShell(event), taxonNavigator.getConversationHolder(), "Choose new parent", excludeTaxa, null, null);
+ parentTaxonNode = TaxonNodeSelectionDialog.select(HandlerUtil.getActiveShell(event), taxonNavigator.getConversationHolder(), "Choose new parent", excludeTaxa, null, classification);
}
if(parentTaxonNode != null){
if(NavigationUtil.isDirty(parentTaxonNode)){
--- /dev/null
+// $Id$
+/**
+* Copyright (C) 2015 EDIT
+* European Distributed Institute of Taxonomy
+* http://www.e-taxonomy.eu
+*
+* The contents of this file are subject to the Mozilla Public License Version 1.1
+* See LICENSE.TXT at the top of this package for the full license terms.
+*/
+package eu.etaxonomy.taxeditor.navigation.navigator.handler;
+
+import org.eclipse.core.commands.ExecutionEvent;
+import org.eclipse.ui.IEditorInput;
+import org.eclipse.ui.IEditorReference;
+import org.eclipse.ui.IWorkbenchPage;
+import org.eclipse.ui.PartInitException;
+import org.eclipse.ui.handlers.HandlerUtil;
+
+import eu.etaxonomy.cdm.model.common.ITreeNode;
+import eu.etaxonomy.cdm.model.taxon.TaxonNode;
+import eu.etaxonomy.taxeditor.editor.TaxonEditorInput;
+
+/**
+ * @author cmathew
+ * @date 16 Jun 2015
+ *
+ */
+public class NavigatorHandlerUtils {
+
+ protected static boolean closeObsoleteEditor(ExecutionEvent event, TaxonNode taxonNode){
+ IWorkbenchPage activePage = HandlerUtil.getActiveWorkbenchWindow(event).getActivePage();
+ boolean result = true;
+ for (IEditorReference ref : activePage.getEditorReferences()) {
+ try {
+ String treeIndex = ((ITreeNode)taxonNode).treeIndex();
+
+
+ IEditorInput input = ref.getEditorInput();
+ if (input instanceof TaxonEditorInput) {
+ TaxonNode node = ((TaxonEditorInput) input).getTaxonNode();
+ //if node is a child of taxonNode then close the editor
+ if( ((ITreeNode) node).treeIndex().startsWith(treeIndex)){
+ //if (taxonNode.equals(node)) {
+ result &= activePage.closeEditor(ref.getEditor(false), true);
+
+ }
+ }
+ } catch (PartInitException e) {
+ continue;
+ }
+ }
+ return result;
+ }
+
+}
--- /dev/null
+/**
+ *
+ */
+package eu.etaxonomy.taxeditor.navigation.navigator.handler;
+
+import java.util.ArrayList;
+import java.util.List;
+import java.util.UUID;
+
+import org.apache.log4j.Logger;
+import org.eclipse.core.commands.ExecutionEvent;
+import org.eclipse.core.commands.operations.AbstractOperation;
+import org.eclipse.core.runtime.IStatus;
+import org.eclipse.core.runtime.Status;
+import org.eclipse.jface.viewers.TreeSelection;
+import org.eclipse.ui.handlers.HandlerUtil;
+
+import eu.etaxonomy.cdm.api.conversation.ConversationHolderMock;
+import eu.etaxonomy.cdm.model.taxon.ITaxonTreeNode;
+import eu.etaxonomy.cdm.model.taxon.TaxonNode;
+import eu.etaxonomy.taxeditor.navigation.navigator.TaxonNavigatorLabels;
+import eu.etaxonomy.taxeditor.navigation.navigator.operation.RemotingChangeAcceptedTaxonToSynonymOperation;
+import eu.etaxonomy.taxeditor.operation.RemotingCdmHandler;
+import eu.etaxonomy.taxeditor.ui.dialog.selection.TaxonNodeSelectionDialog;
+
+/**
+ * <p>ChangeAcceptedTaxonToSynonymHandler class.</p>
+ *
+ * @author n.hoffmann
+ * @created Jan 4, 2010
+ * @version 1.0
+ */
+public class RemotingChangeAcceptedTaxonToSynonymHandler extends RemotingCdmHandler {
+
+ private static final Logger logger = Logger
+ .getLogger(RemotingChangeAcceptedTaxonToSynonymHandler.class);
+
+
+ private ITaxonTreeNode oldTaxonNode;
+
+ /**
+ * @param label
+ */
+ public RemotingChangeAcceptedTaxonToSynonymHandler() {
+ super(TaxonNavigatorLabels.CHANGE_ACCEPTED_TAXON_TO_SYNONYM_LABEL);
+ }
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.operation.RemotingCdmHandler#allowOperations(org.eclipse.core.commands.ExecutionEvent)
+ */
+ @Override
+ public IStatus allowOperations(ExecutionEvent event) {
+ TreeSelection selection = (TreeSelection) HandlerUtil.getCurrentSelection(event);
+ // check that only a single taxon tree node has been selected
+ if(selection.size() > 1) {
+ return new Status(IStatus.ERROR,
+ "unknown",
+ TaxonNavigatorLabels.SINGLE_TAXON_SELECTION_MESSAGE);
+ }
+
+ // check for no taxon tree node selected
+ if(selection.size() == 0) {
+ return new Status(IStatus.ERROR,
+ "unknown",
+ TaxonNavigatorLabels.NO_TAXON_SELECTION_MESSAGE);
+ }
+
+ // check that selected object is a taxon node
+ Object obj = selection.iterator().next();
+ if(obj instanceof ITaxonTreeNode) {
+ oldTaxonNode = (ITaxonTreeNode)obj;
+ } else {
+ return new Status(IStatus.ERROR,
+ "unknown",
+ TaxonNavigatorLabels.SELECTED_OBJECT_NOT_TREE_NODE_MESSAGE);
+ }
+ // check that the source taxon node does not have children
+ if(((TaxonNode)oldTaxonNode).getCountChildren() > 0) {
+ return new Status(IStatus.ERROR,
+ "unknown",
+ TaxonNavigatorLabels.SOURCE_TAXON_HAS_CHILDREN_MESSAGE);
+
+ }
+
+ // check if corresponding name editor is closed
+ boolean editorClosed = NavigatorHandlerUtils.closeObsoleteEditor(event, (TaxonNode) oldTaxonNode);
+ if(editorClosed != true) {
+ return new Status(IStatus.ERROR,
+ "unknown",
+ TaxonNavigatorLabels.RELATED_EDITOR_NOT_CLOSED_MESSAGE);
+ }
+
+ return Status.OK_STATUS;
+ }
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.operation.RemotingCdmHandler#doOperations(org.eclipse.core.commands.ExecutionEvent)
+ */
+ @Override
+ public AbstractOperation prepareOperation(ExecutionEvent event) {
+ List<UUID> excludeTaxa = new ArrayList<UUID>();
+ excludeTaxa.add(oldTaxonNode.getUuid());
+ TaxonNode newAcceptedTaxonNode = TaxonNodeSelectionDialog.select(HandlerUtil.getActiveShell(event),
+ new ConversationHolderMock(),
+ "Choose the accepted taxon",
+ excludeTaxa,
+ null,
+ ((TaxonNode)oldTaxonNode).getClassification());
+
+ if (newAcceptedTaxonNode == null) {
+ return null;
+ }
+
+ RemotingChangeAcceptedTaxonToSynonymOperation rcattso =
+ new RemotingChangeAcceptedTaxonToSynonymOperation(event.getTrigger(),
+ false,
+ oldTaxonNode.getUuid(),
+ newAcceptedTaxonNode.getUuid());
+
+ return rcattso;
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.operation.RemotingCdmHandler#onComplete(org.eclipse.core.commands.ExecutionEvent)
+ */
+ @Override
+ public void onComplete() {
+ // TODO Auto-generated method stub
+
+ }
+
+
+
+
+}
--- /dev/null
+// $Id$
+/**
+ * Copyright (C) 2015 EDIT
+ * European Distributed Institute of Taxonomy
+ * http://www.e-taxonomy.eu
+ *
+ * The contents of this file are subject to the Mozilla Public License Version 1.1
+ * See LICENSE.TXT at the top of this package for the full license terms.
+ */
+package eu.etaxonomy.taxeditor.navigation.navigator.handler;
+
+import java.util.HashSet;
+import java.util.Iterator;
+import java.util.Set;
+
+import org.eclipse.core.commands.ExecutionEvent;
+import org.eclipse.core.commands.operations.AbstractOperation;
+import org.eclipse.core.runtime.IStatus;
+import org.eclipse.core.runtime.Status;
+import org.eclipse.jface.dialogs.MessageDialog;
+import org.eclipse.jface.viewers.TreeSelection;
+import org.eclipse.ui.IWorkbenchPage;
+import org.eclipse.ui.handlers.HandlerUtil;
+
+import eu.etaxonomy.cdm.api.service.config.TaxonDeletionConfigurator;
+import eu.etaxonomy.cdm.api.service.config.TaxonNodeDeletionConfigurator;
+import eu.etaxonomy.cdm.api.service.config.TaxonNodeDeletionConfigurator.ChildHandling;
+import eu.etaxonomy.cdm.model.taxon.Classification;
+import eu.etaxonomy.cdm.model.taxon.ITaxonTreeNode;
+import eu.etaxonomy.cdm.model.taxon.TaxonNode;
+import eu.etaxonomy.taxeditor.editor.EditorUtil;
+import eu.etaxonomy.taxeditor.navigation.navigator.TaxonNavigatorLabels;
+import eu.etaxonomy.taxeditor.navigation.navigator.operation.RemotingDeleteTaxonNodeOperation;
+import eu.etaxonomy.taxeditor.operation.RemotingCdmHandler;
+import eu.etaxonomy.taxeditor.ui.dialog.deleteConfigurator.DeleteConfiguratorDialog;
+
+/**
+ * @author cmathew
+ * @date 22 Jun 2015
+ *
+ */
+public class RemotingDeleteTaxonNodeHandler extends RemotingCdmHandler {
+
+ private TaxonDeletionConfigurator config;
+ private Set<ITaxonTreeNode> treeNodes;
+
+ /**
+ * @param label
+ */
+ public RemotingDeleteTaxonNodeHandler() {
+ super(TaxonNavigatorLabels.DELETE_TAXON_NODE_LABEL);
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.operation.RemotingCdmHandler#allowOperations(org.eclipse.core.commands.ExecutionEvent)
+ */
+ @Override
+ public IStatus allowOperations(ExecutionEvent event) {
+ TreeSelection selection = (TreeSelection) HandlerUtil.getCurrentSelection(event);
+
+ Iterator selectionIterator = selection.iterator();
+ treeNodes = new HashSet<ITaxonTreeNode>();
+
+ while (selectionIterator.hasNext()){
+ Object object = selectionIterator.next();
+ if(object instanceof ITaxonTreeNode) {
+ treeNodes.add((ITaxonTreeNode) object);
+ }
+ }
+ boolean allEditorsClosed = true;
+ IWorkbenchPage activePage = HandlerUtil.getActiveWorkbenchWindow(event).getActivePage();
+ for (ITaxonTreeNode treeNode : treeNodes) {
+ if(treeNode instanceof TaxonNode) {
+ allEditorsClosed &= EditorUtil.closeObsoleteEditor((TaxonNode) treeNode, activePage);
+ }
+ }
+ if(!allEditorsClosed) {
+ return new Status(IStatus.WARNING,
+ "unknown",
+ TaxonNavigatorLabels.RELATED_EDITOR_NOT_CLOSED_MESSAGE);
+ }
+
+ config = new TaxonDeletionConfigurator();
+
+ if (treeNodes.size() == 1 ){
+
+ ITaxonTreeNode treeNode = treeNodes.iterator().next();
+ ITaxonTreeNode taxonNode = treeNode;
+ TaxonNodeDeletionConfigurator configNodes = new TaxonNodeDeletionConfigurator();
+ if (taxonNode instanceof Classification && taxonNode.hasChildNodes()){
+ if(!DeleteConfiguratorDialog.openConfirmWithConfigurator(config, HandlerUtil.getActiveShell(event), "Confirm Deletion", "Do you really want to delete the classification? The tree has children, they will be deleted, too.")){
+ return Status.CANCEL_STATUS;
+ }
+ } else if (taxonNode instanceof Classification && !taxonNode.hasChildNodes()){
+ if(!DeleteConfiguratorDialog.openConfirmWithConfigurator(config, HandlerUtil.getActiveShell(event), "Confirm Deletion", "Do you really want to delete the classification?")){
+ return Status.CANCEL_STATUS;
+ }
+ } else {
+
+ if (taxonNode.hasChildNodes()){
+ DeleteConfiguratorDialog dialog = new DeleteConfiguratorDialog(
+ config,
+ HandlerUtil.getActiveShell(event),
+ "Confirm Deletion",
+ null,
+ "Do you really want to delete the selected node? It has childnodes, they will be deleted, too.",
+ MessageDialog.WARNING, new String[] { "Delete all children",
+ "Move children to parent node", "Skip" }, 0);
+ int result = dialog.open();
+
+ if (result == 0){
+ //delete all children
+ configNodes.setChildHandling(ChildHandling.DELETE);
+ config.setTaxonNodeConfig(configNodes);
+ } else if (result == 1){
+ //move children
+ configNodes.setChildHandling(ChildHandling.MOVE_TO_PARENT);
+ config.setTaxonNodeConfig(configNodes);
+ } else if (result == 2){
+ return Status.CANCEL_STATUS;
+ }
+ } else{
+ if(!DeleteConfiguratorDialog.openConfirmWithConfigurator(configNodes, HandlerUtil.getActiveShell(event), "Confirm Deletion", "Do you really want to delete the selected node?")){
+ return Status.CANCEL_STATUS;
+ }
+ config.setTaxonNodeConfig(configNodes);
+ }
+ }
+ }
+ return Status.OK_STATUS;
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.operation.RemotingCdmHandler#prepareOperation(org.eclipse.core.commands.ExecutionEvent)
+ */
+ @Override
+ public AbstractOperation prepareOperation(ExecutionEvent event) {
+ return new RemotingDeleteTaxonNodeOperation(event.getTrigger(),
+ false,
+ treeNodes,
+ config);
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.operation.RemotingCdmHandler#onComplete()
+ */
+ @Override
+ public void onComplete() {
+ // TODO Auto-generated method stub
+
+ }
+
+}
--- /dev/null
+// $Id$
+/**
+* Copyright (C) 2015 EDIT
+* European Distributed Institute of Taxonomy
+* http://www.e-taxonomy.eu
+*
+* The contents of this file are subject to the Mozilla Public License Version 1.1
+* See LICENSE.TXT at the top of this package for the full license terms.
+*/
+package eu.etaxonomy.taxeditor.navigation.navigator.handler;
+
+import java.util.ArrayList;
+import java.util.List;
+import java.util.UUID;
+
+import org.eclipse.core.commands.ExecutionEvent;
+import org.eclipse.core.commands.operations.AbstractOperation;
+import org.eclipse.core.runtime.IStatus;
+import org.eclipse.core.runtime.Status;
+import org.eclipse.jface.viewers.TreeSelection;
+import org.eclipse.swt.widgets.Display;
+import org.eclipse.ui.PartInitException;
+import org.eclipse.ui.handlers.HandlerUtil;
+
+import eu.etaxonomy.cdm.api.conversation.ConversationHolderMock;
+import eu.etaxonomy.cdm.model.taxon.ITaxonTreeNode;
+import eu.etaxonomy.cdm.model.taxon.TaxonNode;
+import eu.etaxonomy.taxeditor.editor.EditorUtil;
+import eu.etaxonomy.taxeditor.editor.MultiPageTaxonEditor;
+import eu.etaxonomy.taxeditor.model.AbstractUtility;
+import eu.etaxonomy.taxeditor.model.MessagingUtils;
+import eu.etaxonomy.taxeditor.navigation.NavigationUtil;
+import eu.etaxonomy.taxeditor.navigation.navigator.TaxonNavigatorLabels;
+import eu.etaxonomy.taxeditor.navigation.navigator.operation.RemotingMoveFactualDataOperation;
+import eu.etaxonomy.taxeditor.operation.RemotingCdmHandler;
+import eu.etaxonomy.taxeditor.ui.dialog.selection.TaxonNodeSelectionDialog;
+
+/**
+ * @author cmathew
+ * @date 19 Jun 2015
+ *
+ */
+public class RemotingMoveFactualDataHandler extends RemotingCdmHandler {
+
+
+ private TaxonNode sourceTaxonNode;
+ private TaxonNode targetTaxonNode;
+ /**
+ * @param label
+ */
+ public RemotingMoveFactualDataHandler() {
+ super(TaxonNavigatorLabels.MOVE_FACTUAL_DATA_LABEL);
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.operation.RemotingCdmHandler#allowOperations(org.eclipse.core.commands.ExecutionEvent)
+ */
+ @Override
+ public IStatus allowOperations(ExecutionEvent event) {
+ TreeSelection selection = (TreeSelection) HandlerUtil.getCurrentSelection(event);
+ // check that only a single taxon tree node has been selected
+ if(selection.size() > 1) {
+ return new Status(IStatus.ERROR,
+ "unknown",
+ TaxonNavigatorLabels.SINGLE_TAXON_SELECTION_MESSAGE);
+ }
+
+ // check for no taxon tree node selected
+ if(selection.size() == 0) {
+ return new Status(IStatus.ERROR,
+ "unknown",
+ TaxonNavigatorLabels.NO_TAXON_SELECTION_MESSAGE);
+ }
+
+ // check that selected object is a taxon node
+ Object obj = selection.iterator().next();
+ if(obj instanceof ITaxonTreeNode) {
+ sourceTaxonNode = (TaxonNode)obj;
+ } else {
+ return new Status(IStatus.ERROR,
+ "unknown",
+ TaxonNavigatorLabels.SELECTED_OBJECT_NOT_TREE_NODE_MESSAGE);
+ }
+
+ if(NavigationUtil.isDirty(sourceTaxonNode)) {
+ return new Status(IStatus.ERROR,
+ "unknown",
+ TaxonNavigatorLabels.UNSAVED_CHANGES_MESSAGE);
+ }
+
+ List<UUID> excludeTaxa = new ArrayList<UUID>();
+ excludeTaxa.add(sourceTaxonNode.getTaxon().getUuid());
+
+ targetTaxonNode = TaxonNodeSelectionDialog.select(HandlerUtil.getActiveShell(event),
+ new ConversationHolderMock(),
+ "Choose the accepted taxon",
+ excludeTaxa,
+ null,
+ null);
+
+ if(targetTaxonNode == null) {
+ return new Status(IStatus.CANCEL,
+ "unknown",
+ "");
+ }
+ if(NavigationUtil.isDirty(targetTaxonNode)){
+ return new Status(IStatus.ERROR,
+ "unknown",
+ TaxonNavigatorLabels.UNSAVED_CHANGES_MESSAGE);
+ }
+ return Status.OK_STATUS;
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.operation.RemotingCdmHandler#prepareOperation(org.eclipse.core.commands.ExecutionEvent)
+ */
+ @Override
+ public AbstractOperation prepareOperation(ExecutionEvent event) {
+ return new RemotingMoveFactualDataOperation(event.getTrigger(),
+ false,
+ sourceTaxonNode.getTaxon().getUuid(),
+ targetTaxonNode.getTaxon().getUuid());
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.operation.RemotingCdmHandler#onComplete()
+ */
+ @Override
+ public void onComplete() {
+ Display.getDefault().asyncExec(new Runnable(){
+ @Override
+ public void run() {
+ try {
+ //close and re-open to refresh factual data view
+ MultiPageTaxonEditor sourceEditor = (MultiPageTaxonEditor) EditorUtil.findEditorByTaxonNodeUuid(sourceTaxonNode.getUuid());
+ MultiPageTaxonEditor targetEditor = (MultiPageTaxonEditor) EditorUtil.findEditorByTaxonNodeUuid(targetTaxonNode.getUuid());
+ if(targetEditor != null){
+ AbstractUtility.close(sourceEditor);
+ AbstractUtility.close(targetEditor);
+ }
+ EditorUtil.openTaxonNode(sourceTaxonNode.getUuid());
+ EditorUtil.openTaxonNode(targetTaxonNode.getUuid());
+ } catch (PartInitException e) {
+ MessagingUtils.error(this.getClass(), e);
+ throw new RuntimeException(e);
+ } catch (Exception e) {
+ MessagingUtils.warningDialog("Could not create Taxon", this, e.getMessage());
+ }
+ }
+
+ });
+
+ }
+
+}
--- /dev/null
+// $Id$
+/**
+ * Copyright (C) 2015 EDIT
+ * European Distributed Institute of Taxonomy
+ * http://www.e-taxonomy.eu
+ *
+ * The contents of this file are subject to the Mozilla Public License Version 1.1
+ * See LICENSE.TXT at the top of this package for the full license terms.
+ */
+package eu.etaxonomy.taxeditor.navigation.navigator.handler;
+
+import java.util.ArrayList;
+import java.util.List;
+import java.util.UUID;
+
+import org.eclipse.core.commands.ExecutionEvent;
+import org.eclipse.core.commands.operations.AbstractOperation;
+import org.eclipse.core.runtime.IStatus;
+import org.eclipse.core.runtime.Status;
+import org.eclipse.jface.dialogs.MessageDialog;
+import org.eclipse.jface.viewers.TreeSelection;
+import org.eclipse.swt.widgets.Shell;
+import org.eclipse.ui.handlers.HandlerUtil;
+
+import eu.etaxonomy.cdm.api.conversation.ConversationHolderMock;
+import eu.etaxonomy.cdm.model.taxon.TaxonNode;
+import eu.etaxonomy.taxeditor.navigation.NavigationUtil;
+import eu.etaxonomy.taxeditor.navigation.navigator.TaxonNavigatorLabels;
+import eu.etaxonomy.taxeditor.navigation.navigator.operation.RemotingMoveTaxonOperation;
+import eu.etaxonomy.taxeditor.operation.RemotingCdmHandler;
+import eu.etaxonomy.taxeditor.preference.PreferencesUtil;
+import eu.etaxonomy.taxeditor.ui.dialog.selection.TaxonNodeSelectionDialog;
+
+/**
+ * @author cmathew
+ * @date 19 Jun 2015
+ *
+ */
+public class RemotingMoveTaxonNodeHandler extends RemotingCdmHandler {
+
+ private TaxonNode oldTaxonNode;
+
+ public RemotingMoveTaxonNodeHandler() {
+ super(TaxonNavigatorLabels.MOVE_TAXON_LABEL);
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.operation.RemotingCdmHandler#allowOperations(org.eclipse.core.commands.ExecutionEvent)
+ */
+ @Override
+ public IStatus allowOperations(ExecutionEvent event) {
+ TreeSelection selection = (TreeSelection) HandlerUtil.getCurrentSelection(event);
+ // check that only a single taxon tree node has been selected
+ if(selection.size() > 1) {
+ return new Status(IStatus.ERROR,
+ "unknown",
+ TaxonNavigatorLabels.SINGLE_TAXON_SELECTION_MESSAGE);
+ }
+
+ // check for no taxon tree node selected
+ if(selection.size() == 0) {
+ return new Status(IStatus.ERROR,
+ "unknown",
+ TaxonNavigatorLabels.NO_TAXON_SELECTION_MESSAGE);
+ }
+ // check that selected object is a taxon node
+ Object obj = selection.iterator().next();
+ if(obj instanceof TaxonNode) {
+ oldTaxonNode = (TaxonNode)obj;
+ } else {
+ return new Status(IStatus.ERROR,
+ "unknown",
+ TaxonNavigatorLabels.SELECTED_OBJECT_NOT_TREE_NODE_MESSAGE);
+ }
+ return Status.OK_STATUS;
+ }
+
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.operation.RemotingCdmHandler#prepareOperation(org.eclipse.core.commands.ExecutionEvent)
+ */
+ @Override
+ public AbstractOperation prepareOperation(ExecutionEvent event) {
+ Shell activeShell = HandlerUtil.getActiveShell(event);
+ TaxonNode parentTaxonNode;
+
+ List<UUID> excludeTaxa = new ArrayList<UUID>();
+ excludeTaxa.add(oldTaxonNode.getUuid());
+
+ boolean moveToNewParent = true;
+
+ if (PreferencesUtil.getSortNodesNaturally()){
+ if(!MessageDialog.openQuestion(activeShell, "Target node", "The choosen target node should be the parent?")){
+ moveToNewParent = false;
+ }
+ parentTaxonNode = TaxonNodeSelectionDialog.select(activeShell,
+ new ConversationHolderMock(),
+ "Choose the taxon above the moved taxon.",
+ excludeTaxa,
+ null,
+ null);
+ } else {
+ parentTaxonNode = TaxonNodeSelectionDialog.select(activeShell,
+ new ConversationHolderMock(),
+ "Choose new parent",
+ excludeTaxa,
+ null,
+ null);
+ }
+
+
+ if(parentTaxonNode != null){
+ if(NavigationUtil.isDirty(parentTaxonNode)){
+ MessageDialog.openWarning(activeShell,
+ "Unsaved Parent Taxon",
+ "There are unsaved changes in the parent taxon. Please save first.");
+ return null;
+ }
+
+ return new RemotingMoveTaxonOperation(event.getTrigger(),
+ false,
+ oldTaxonNode.getUuid(),
+ parentTaxonNode.getUuid(),
+ moveToNewParent);
+ }
+
+ return null;
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.operation.RemotingCdmHandler#onComplete()
+ */
+ @Override
+ public void onComplete() {
+ // TODO Auto-generated method stub
+
+ }
+
+}
import org.eclipse.core.runtime.Status;
import eu.etaxonomy.cdm.api.conversation.IConversationEnabled;
-import eu.etaxonomy.cdm.api.service.DeleteResult;
import eu.etaxonomy.cdm.api.service.ITaxonNodeService;
+import eu.etaxonomy.cdm.api.service.UpdateResult;
import eu.etaxonomy.cdm.api.service.config.TaxonDeletionConfigurator;
import eu.etaxonomy.cdm.hibernate.HibernateProxyHelper;
import eu.etaxonomy.cdm.model.taxon.ITaxonTreeNode;
import eu.etaxonomy.taxeditor.model.MessagingUtils;
import eu.etaxonomy.taxeditor.navigation.internal.TaxeditorNavigationPlugin;
import eu.etaxonomy.taxeditor.operation.IPostOperationEnabled;
+import eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled;
import eu.etaxonomy.taxeditor.store.CdmStore;
/**
DeleteOperation {
private final TaxonNode newAcceptedTaxonNode;
+ private final ICdmEntitySessionEnabled cdmEntitySessionEnabled;
+
//private TaxonNode oldTaxonNode;
* @param conversationEnabled a {@link eu.etaxonomy.cdm.api.conversation.IConversationEnabled} object.
*/
public ChangeAcceptedTaxonToSynonymOperation(String label,
- IUndoContext undoContext, ITaxonTreeNode oldTaxonNode, TaxonNode newAcceptedTaxonNode,
- IPostOperationEnabled postOperationEnabled, IConversationEnabled conversationEnabled) {
- super(label, undoContext, oldTaxonNode, new TaxonDeletionConfigurator(),postOperationEnabled, conversationEnabled);
+ IUndoContext undoContext,
+ ITaxonTreeNode oldTaxonNode,
+ TaxonNode newAcceptedTaxonNode,
+ IPostOperationEnabled postOperationEnabled,
+ IConversationEnabled conversationEnabled,
+ ICdmEntitySessionEnabled cdmEntitySessionEnabled) {
+ super(label, undoContext, oldTaxonNode, new TaxonDeletionConfigurator(),postOperationEnabled, conversationEnabled, cdmEntitySessionEnabled);
this.newAcceptedTaxonNode = newAcceptedTaxonNode;
+ this.cdmEntitySessionEnabled = cdmEntitySessionEnabled;
}
monitor.worked(20);
bind();
+
Taxon oldTaxon = HibernateProxyHelper.deproxy(((TaxonNode) taxonNode).getTaxon(), Taxon.class);
Taxon newAcceptedTaxon = HibernateProxyHelper.deproxy(newAcceptedTaxonNode.getTaxon(), Taxon.class);
try {
- DeleteResult result = CdmStore.getService(ITaxonNodeService.class).makeTaxonNodeASynonymOfAnotherTaxonNode((TaxonNode) taxonNode, newAcceptedTaxonNode, null, null, null);
+ UpdateResult result = CdmStore.getService(ITaxonNodeService.class).makeTaxonNodeASynonymOfAnotherTaxonNode(taxonNode.getUuid(), newAcceptedTaxonNode.getUuid(), null, null, null);
+
if (!result.getExceptions().isEmpty() && result.isOk()){
String separator = ", ";
// $Id$
/**
-* Copyright (C) 2007 EDIT
-* European Distributed Institute of Taxonomy
-* http://www.e-taxonomy.eu
-*
-* The contents of this file are subject to the Mozilla Public License Version 1.1
-* See LICENSE.TXT at the top of this package for the full license terms.
-*/
+ * Copyright (C) 2007 EDIT
+ * European Distributed Institute of Taxonomy
+ * http://www.e-taxonomy.eu
+ *
+ * The contents of this file are subject to the Mozilla Public License Version 1.1
+ * See LICENSE.TXT at the top of this package for the full license terms.
+ */
package eu.etaxonomy.taxeditor.navigation.navigator.operation;
+import java.util.HashSet;
import java.util.Set;
+import java.util.UUID;
import org.eclipse.core.commands.ExecutionException;
import org.eclipse.core.commands.operations.IUndoContext;
import eu.etaxonomy.cdm.model.taxon.Classification;
import eu.etaxonomy.cdm.model.taxon.ITaxonTreeNode;
import eu.etaxonomy.cdm.model.taxon.TaxonNode;
-import eu.etaxonomy.taxeditor.model.MessagingUtils;
import eu.etaxonomy.taxeditor.operation.AbstractPersistentPostOperation;
import eu.etaxonomy.taxeditor.operation.IPostOperationEnabled;
+import eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled;
import eu.etaxonomy.taxeditor.store.CdmStore;
/**
*/
public class DeleteOperation extends AbstractPersistentPostOperation{
- private Set<ITaxonTreeNode> treeNodes;
- protected final TaxonDeletionConfigurator config;
+ private Set<ITaxonTreeNode> treeNodes;
+ protected final TaxonDeletionConfigurator config;
+ private final ICdmEntitySessionEnabled cdmEntitySessionEnabled;
+
+ /**
+ * <p>Constructor for DeleteTreeNodeOperation.</p>
+ *
+ * @param label a {@link java.lang.String} object.
+ * @param undoContext a {@link org.eclipse.core.commands.operations.IUndoContext} object.
+ * @param postOperationEnabled a {@link eu.etaxonomy.taxeditor.operation.IPostOperationEnabled} object.
+ * @param conversationEnabled a {@link eu.etaxonomy.cdm.api.conversation.IConversationEnabled} object.
+ * @param treeNodes a {@link java.util.Set} object.
+ */
+ public DeleteOperation(String label, IUndoContext undoContext,
+ ITaxonTreeNode taxonNode, TaxonDeletionConfigurator config,
+ IPostOperationEnabled postOperationEnabled,
+ IConversationEnabled conversationEnabled,
+ ICdmEntitySessionEnabled cdmEntitySessionEnabled) {
+ super(label, undoContext, postOperationEnabled, conversationEnabled, cdmEntitySessionEnabled);
+ this.taxonNode = (ITaxonTreeNode)CdmBase.deproxy(taxonNode, CdmBase.class);
+ this.config = config;
+ this.cdmEntitySessionEnabled = cdmEntitySessionEnabled;
+ }
+
+ /**
+ * <p>Constructor for DeleteTreeNodeOperation.</p>
+ *
+ * @param label a {@link java.lang.String} object.
+ * @param undoContext a {@link org.eclipse.core.commands.operations.IUndoContext} object.
+ * @param postOperationEnabled a {@link eu.etaxonomy.taxeditor.operation.IPostOperationEnabled} object.
+ * @param conversationEnabled a {@link eu.etaxonomy.cdm.api.conversation.IConversationEnabled} object.
+ * @param treeNodes a {@link java.util.Set} object.
+ */
+ public DeleteOperation(String label, IUndoContext undoContext,
+ Set<ITaxonTreeNode> treeNodes, TaxonDeletionConfigurator config,
+ IPostOperationEnabled postOperationEnabled,
+ IConversationEnabled conversationEnabled,
+ ICdmEntitySessionEnabled cdmEntitySessionEnabled) {
+ super(label, undoContext, postOperationEnabled, conversationEnabled, cdmEntitySessionEnabled);
+ this.treeNodes = treeNodes;
+ this.config = config;
+ this.cdmEntitySessionEnabled = cdmEntitySessionEnabled;
+ }
- /**
- * <p>Constructor for DeleteTreeNodeOperation.</p>
- *
- * @param label a {@link java.lang.String} object.
- * @param undoContext a {@link org.eclipse.core.commands.operations.IUndoContext} object.
- * @param postOperationEnabled a {@link eu.etaxonomy.taxeditor.operation.IPostOperationEnabled} object.
- * @param conversationEnabled a {@link eu.etaxonomy.cdm.api.conversation.IConversationEnabled} object.
- * @param treeNodes a {@link java.util.Set} object.
- */
- public DeleteOperation(String label, IUndoContext undoContext,
- ITaxonTreeNode taxonNode, TaxonDeletionConfigurator config,
- IPostOperationEnabled postOperationEnabled,
- IConversationEnabled conversationEnabled) {
- super(label, undoContext, postOperationEnabled, conversationEnabled);
- this.taxonNode = (ITaxonTreeNode)CdmBase.deproxy(taxonNode, CdmBase.class);
- this.config = config;
- }
-
- /**
- * <p>Constructor for DeleteTreeNodeOperation.</p>
- *
- * @param label a {@link java.lang.String} object.
- * @param undoContext a {@link org.eclipse.core.commands.operations.IUndoContext} object.
- * @param postOperationEnabled a {@link eu.etaxonomy.taxeditor.operation.IPostOperationEnabled} object.
- * @param conversationEnabled a {@link eu.etaxonomy.cdm.api.conversation.IConversationEnabled} object.
- * @param treeNodes a {@link java.util.Set} object.
- */
- public DeleteOperation(String label, IUndoContext undoContext,
- Set<ITaxonTreeNode> treeNodes, TaxonDeletionConfigurator config,
- IPostOperationEnabled postOperationEnabled,
- IConversationEnabled conversationEnabled) {
- super(label, undoContext, postOperationEnabled, conversationEnabled);
- this.treeNodes = treeNodes;
- this.config = config;
- }
/* (non-Javadoc)
} else if (!result.getExceptions().isEmpty()){
String separator = ", ";
String exceptionString = "";
- int count = 1;
for (Exception exception : result.getExceptions()) {
- exceptionString += exception.getLocalizedMessage();
- if (count < result.getExceptions().size()){
- exceptionString += separator;
- }
+ exceptionString += exception.getLocalizedMessage()+separator;
}
- MessagingUtils.informationDialog("Delete of the node was successful but the taxon could not be deleted.", exceptionString);
+ MessageDialog.openInformation(null, "Delete of the node was successful but the taxon could not be deleted.", exceptionString);
}
}else if(taxonNode != null && taxonNode instanceof Classification){
Classification taxonomicTree = (Classification) taxonNode;
- /*if(taxonomicTree.hasChildNodes()){
- if(! MessageDialog.openConfirm(null, "Confirm Deletion", "The selected tree has children, do yu realy want to delete the whole tree with its children?")){
- return null;
- }
- }*/
- DeleteResult result = CdmStore.getService(IClassificationService.class).delete(taxonomicTree);
- if (result.isError() && !result.getExceptions().isEmpty()){
- String separator = ", ";
- String exceptionString = "";
- for (Exception exception : result.getExceptions()) {
- exceptionString += exception.getLocalizedMessage()+separator;
- }
- MessagingUtils.error(null, exceptionString, result.getExceptions().iterator().next());
- }
-
- /*}else{
- try{
- CdmStore.getService(IClassificationService.class).delete(taxonomicTree);
- }catch(ReferencedObjectUndeletableException e){
- throw new ExecutionException(e.getMessage());
- }
- }*/
- } else {
-
- DeleteResult result =service.deleteTaxonNodes(treeNodes, config);
- if (result.isError() && !result.getExceptions().isEmpty()){
- String separator = ", ";
- String exceptionString = "";
- for (Exception exception : result.getExceptions()) {
- exceptionString += exception.getLocalizedMessage()+separator;
- }
- MessagingUtils.error(null, exceptionString, result.getExceptions().iterator().next());
- }
+ DeleteResult result = CdmStore.getService(IClassificationService.class).delete(taxonomicTree.getUuid());
+ if (result.isError() && !result.getExceptions().isEmpty()){
+ //TODO:Error message!
+ MessageDialog.openError(null, "Delete failed", result.getExceptions().iterator().next().getMessage());
+ }
+ } else {
+ Set<UUID> treeNodeUuids = new HashSet<UUID>();
+ ITaxonTreeNode entity = null;
+ for(ITaxonTreeNode treeNode : treeNodes) {
+ if(entity == null) {
+ entity = treeNode;
+ }
+ treeNodeUuids.add(treeNode.getUuid());
+ }
+
+ DeleteResult result = service.deleteTaxonNodes(treeNodeUuids, config);
+ if (result.isError() && !result.getExceptions().isEmpty()){
+ //TODO:Error message!
+ MessageDialog.openError(null, "Delete failed", result.getExceptions().iterator().next().getMessage());
}
- monitor.worked(40);
- return postExecute(null);
- }
-
- /* (non-Javadoc)
- * @see org.eclipse.core.commands.operations.AbstractOperation#redo(org.eclipse.core.runtime.IProgressMonitor, org.eclipse.core.runtime.IAdaptable)
- */
- /** {@inheritDoc} */
- @Override
- public IStatus redo(IProgressMonitor monitor, IAdaptable info)
- throws ExecutionException {
- return null;
- }
-
- /* (non-Javadoc)
- * @see org.eclipse.core.commands.operations.AbstractOperation#undo(org.eclipse.core.runtime.IProgressMonitor, org.eclipse.core.runtime.IAdaptable)
- */
- /** {@inheritDoc} */
- @Override
- public IStatus undo(IProgressMonitor monitor, IAdaptable info)
- throws ExecutionException {
- return null;
- }
+ }
+
+ monitor.worked(40);
+
+ return postExecute(null);
+ }
+
+ /* (non-Javadoc)
+ * @see org.eclipse.core.commands.operations.AbstractOperation#redo(org.eclipse.core.runtime.IProgressMonitor, org.eclipse.core.runtime.IAdaptable)
+ */
+ /** {@inheritDoc} */
+ @Override
+ public IStatus redo(IProgressMonitor monitor, IAdaptable info)
+ throws ExecutionException {
+ return null;
+ }
+
+ /* (non-Javadoc)
+ * @see org.eclipse.core.commands.operations.AbstractOperation#undo(org.eclipse.core.runtime.IProgressMonitor, org.eclipse.core.runtime.IAdaptable)
+ */
+ /** {@inheritDoc} */
+ @Override
+ public IStatus undo(IProgressMonitor monitor, IAdaptable info)
+ throws ExecutionException {
+ return null;
+ }
}
// $Id$
/**
* Copyright (C) 2007 EDIT
-* European Distributed Institute of Taxonomy
+* European Distributed Institute of Taxonomy
* http://www.e-taxonomy.eu
-*
+*
* The contents of this file are subject to the Mozilla Public License Version 1.1
* See LICENSE.TXT at the top of this package for the full license terms.
*/
import eu.etaxonomy.cdm.model.taxon.Classification;
import eu.etaxonomy.taxeditor.operation.AbstractPersistentPostOperation;
import eu.etaxonomy.taxeditor.operation.IPostOperationEnabled;
+import eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled;
import eu.etaxonomy.taxeditor.store.CdmStore;
/**
* @version 1.0
*/
public class EditClassificationOperation extends AbstractPersistentPostOperation {
- private Classification classification;
+ private final Classification classification;
/**
* <p>Constructor for EditTaxonomicTreeOperation.</p>
*/
public EditClassificationOperation(String label, IUndoContext undoContext, Classification classification,
IPostOperationEnabled postOperationEnabled,
- IConversationEnabled conversationEnabled) {
- super(label, undoContext, postOperationEnabled, conversationEnabled);
-
+ IConversationEnabled conversationEnabled,
+ ICdmEntitySessionEnabled cdmEntitySessionEnabled) {
+ super(label, undoContext, postOperationEnabled, conversationEnabled, cdmEntitySessionEnabled);
+
this.classification = classification;
}
-
+
/* (non-Javadoc)
* @see org.eclipse.core.commands.operations.AbstractOperation#execute(org.eclipse.core.runtime.IProgressMonitor, org.eclipse.core.runtime.IAdaptable)
*/
public IStatus execute(IProgressMonitor monitor, IAdaptable info)
throws ExecutionException {
bind();
-
+
CdmStore.getService(IClassificationService.class).save(classification);
-
+
monitor.worked(40);
return postExecute(classification);
-
+
}
/* (non-Javadoc)
--- /dev/null
+// $Id$
+/**
+* Copyright (C) 2015 EDIT
+* European Distributed Institute of Taxonomy
+* http://www.e-taxonomy.eu
+*
+* The contents of this file are subject to the Mozilla Public License Version 1.1
+* See LICENSE.TXT at the top of this package for the full license terms.
+*/
+package eu.etaxonomy.taxeditor.navigation.navigator.operation;
+
+import java.util.UUID;
+
+import org.eclipse.core.runtime.IAdaptable;
+import org.eclipse.core.runtime.IProgressMonitor;
+
+import eu.etaxonomy.cdm.api.application.CdmApplicationState;
+import eu.etaxonomy.cdm.api.application.CdmChangeEvent.Action;
+import eu.etaxonomy.cdm.api.service.ITaxonNodeService;
+import eu.etaxonomy.cdm.api.service.UpdateResult;
+import eu.etaxonomy.taxeditor.operation.RemotingCdmUpdateOperation;
+
+
+/**
+ * @author cmathew
+ * @date 17 Jun 2015
+ *
+ */
+public class RemotingChangeAcceptedTaxonToSynonymOperation extends RemotingCdmUpdateOperation {
+
+ private final UUID oldTaxonNodeUuid;
+ private final UUID newAcceptedTaxonNodeUuid;
+
+
+ private final static String LABEL = "Change Accepted Taxon to Synonym operation";
+
+ /**
+ * @param label
+ */
+ public RemotingChangeAcceptedTaxonToSynonymOperation(Object source,
+ boolean async,
+ UUID oldTaxonNodeUuid,
+ UUID newAcceptedTaxonNodeUuid) {
+ super(LABEL, Action.Update, source, async);
+ this.oldTaxonNodeUuid = oldTaxonNodeUuid;
+ this.newAcceptedTaxonNodeUuid = newAcceptedTaxonNodeUuid;
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.operation.RemotingCdmUpdateOperation#doUpdateExecute(org.eclipse.core.runtime.IProgressMonitor, org.eclipse.core.runtime.IAdaptable)
+ */
+ @Override
+ protected UpdateResult doUpdateExecute(IProgressMonitor monitor, IAdaptable info) throws Exception {
+ return CdmApplicationState.getService(ITaxonNodeService.class).makeTaxonNodeASynonymOfAnotherTaxonNode(oldTaxonNodeUuid,
+ newAcceptedTaxonNodeUuid,
+ null,
+ null,
+ null);
+ }
+
+}
--- /dev/null
+// $Id$
+/**
+* Copyright (C) 2015 EDIT
+* European Distributed Institute of Taxonomy
+* http://www.e-taxonomy.eu
+*
+* The contents of this file are subject to the Mozilla Public License Version 1.1
+* See LICENSE.TXT at the top of this package for the full license terms.
+*/
+package eu.etaxonomy.taxeditor.navigation.navigator.operation;
+
+import java.util.HashSet;
+import java.util.Set;
+import java.util.UUID;
+
+import org.eclipse.core.runtime.IAdaptable;
+import org.eclipse.core.runtime.IProgressMonitor;
+
+import eu.etaxonomy.cdm.api.application.CdmApplicationState;
+import eu.etaxonomy.cdm.api.application.CdmChangeEvent.Action;
+import eu.etaxonomy.cdm.api.service.UpdateResult;
+import eu.etaxonomy.cdm.api.service.config.TaxonDeletionConfigurator;
+import eu.etaxonomy.cdm.model.taxon.Classification;
+import eu.etaxonomy.cdm.model.taxon.ITaxonTreeNode;
+import eu.etaxonomy.cdm.model.taxon.TaxonNode;
+import eu.etaxonomy.taxeditor.operation.RemotingCdmUpdateOperation;
+
+/**
+ * @author cmathew
+ * @date 22 Jun 2015
+ *
+ */
+public class RemotingDeleteTaxonNodeOperation extends RemotingCdmUpdateOperation {
+
+ private final static String LABEL = "Delete Taxon Node operation";
+
+ private final Set<ITaxonTreeNode> treeNodes;
+ private final TaxonDeletionConfigurator config;
+
+ /**
+ * @param label
+ * @param action
+ * @param source
+ * @param async
+ */
+ public RemotingDeleteTaxonNodeOperation(Object source,
+ boolean async,
+ Set<ITaxonTreeNode> treeNodes,
+ TaxonDeletionConfigurator config) {
+ super(LABEL, Action.Delete, source, async);
+ this.treeNodes = treeNodes;
+ this.config = config;
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.operation.RemotingCdmUpdateOperation#doUpdateExecute(org.eclipse.core.runtime.IProgressMonitor, org.eclipse.core.runtime.IAdaptable)
+ */
+ @Override
+ protected UpdateResult doUpdateExecute(IProgressMonitor monitor, IAdaptable info) throws Exception {
+
+
+ if(treeNodes.size() == 1) {
+ // when single node this is either a taxon or a classification
+ ITaxonTreeNode node = treeNodes.iterator().next();
+ if(node instanceof TaxonNode) {
+ return CdmApplicationState.getCurrentAppConfig().getTaxonNodeService().deleteTaxonNode(((TaxonNode)node).getUuid(), config);
+ } else if(node instanceof Classification) {
+ entityType = Classification.class;
+ return CdmApplicationState.getCurrentAppConfig().getClassificationService().delete(((Classification)node).getUuid());
+ }
+ } else {
+ // when list we assume all are taxon nodes
+ Set<UUID> treeNodeUuids = new HashSet<UUID>();
+ ITaxonTreeNode entity = null;
+ for(ITaxonTreeNode treeNode : treeNodes) {
+ if(entity == null) {
+ entity = treeNode;
+ }
+ treeNodeUuids.add(treeNode.getUuid());
+ }
+
+ return CdmApplicationState.getCurrentAppConfig().getTaxonNodeService().deleteTaxonNodes(treeNodeUuids, new TaxonDeletionConfigurator());
+ }
+ return null;
+ }
+
+}
--- /dev/null
+// $Id$
+/**
+* Copyright (C) 2015 EDIT
+* European Distributed Institute of Taxonomy
+* http://www.e-taxonomy.eu
+*
+* The contents of this file are subject to the Mozilla Public License Version 1.1
+* See LICENSE.TXT at the top of this package for the full license terms.
+*/
+package eu.etaxonomy.taxeditor.navigation.navigator.operation;
+
+import java.util.UUID;
+
+import org.eclipse.core.runtime.IAdaptable;
+import org.eclipse.core.runtime.IProgressMonitor;
+
+import eu.etaxonomy.cdm.api.application.CdmApplicationState;
+import eu.etaxonomy.cdm.api.application.CdmChangeEvent.Action;
+import eu.etaxonomy.cdm.api.service.IDescriptionService;
+import eu.etaxonomy.cdm.api.service.UpdateResult;
+import eu.etaxonomy.taxeditor.operation.RemotingCdmUpdateOperation;
+
+/**
+ * @author cmathew
+ * @date 19 Jun 2015
+ *
+ */
+public class RemotingMoveFactualDataOperation extends RemotingCdmUpdateOperation {
+
+ private final static String LABEL = "Move Factual Data operation";
+
+ private final UUID sourceTaxonUuid;
+ private final UUID targetParentTaxonUuid;
+
+ /**
+ * @param label
+ * @param action
+ * @param source
+ * @param async
+ */
+ public RemotingMoveFactualDataOperation(Object source,
+ boolean async,
+ UUID sourceTaxonUuid,
+ UUID targetParentTaxonUuid) {
+ super(LABEL, Action.Update, source, async);
+ this.sourceTaxonUuid = sourceTaxonUuid;
+ this.targetParentTaxonUuid = targetParentTaxonUuid;
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.operation.RemotingCdmUpdateOperation#doUpdateExecute(org.eclipse.core.runtime.IProgressMonitor, org.eclipse.core.runtime.IAdaptable)
+ */
+ @Override
+ protected UpdateResult doUpdateExecute(IProgressMonitor monitor, IAdaptable info) throws Exception {
+ return CdmApplicationState.getService(IDescriptionService.class).moveTaxonDescriptions(sourceTaxonUuid,
+ targetParentTaxonUuid);
+ }
+
+}
--- /dev/null
+// $Id$
+/**
+* Copyright (C) 2015 EDIT
+* European Distributed Institute of Taxonomy
+* http://www.e-taxonomy.eu
+*
+* The contents of this file are subject to the Mozilla Public License Version 1.1
+* See LICENSE.TXT at the top of this package for the full license terms.
+*/
+package eu.etaxonomy.taxeditor.navigation.navigator.operation;
+
+import java.util.HashSet;
+import java.util.Set;
+import java.util.UUID;
+
+import org.eclipse.core.runtime.IAdaptable;
+import org.eclipse.core.runtime.IProgressMonitor;
+
+import eu.etaxonomy.cdm.api.application.CdmApplicationState;
+import eu.etaxonomy.cdm.api.application.CdmChangeEvent.Action;
+import eu.etaxonomy.cdm.api.service.ITaxonNodeService;
+import eu.etaxonomy.cdm.api.service.UpdateResult;
+import eu.etaxonomy.cdm.model.taxon.TaxonNode;
+import eu.etaxonomy.taxeditor.operation.RemotingCdmUpdateOperation;
+
+/**
+ * @author cmathew
+ * @date 19 Jun 2015
+ *
+ */
+public class RemotingMoveTaxonOperation extends RemotingCdmUpdateOperation {
+
+ private final static String LABEL = "Move Taxon operation";
+
+ private Set<UUID> taxonNodesToMoveUuid;
+ private final UUID newParentTreeNodeUuid;
+ private final boolean moveToParentNode;
+
+ public RemotingMoveTaxonOperation(Object source,
+ boolean async,
+ UUID taxonNodeToMoveUuid,
+ UUID newParentTreeNodeUuid,
+ boolean moveToParentNode) {
+ super(LABEL, Action.Update, source,async);
+ taxonNodesToMoveUuid = new HashSet<UUID>();
+ taxonNodesToMoveUuid.add(taxonNodeToMoveUuid);
+ this.newParentTreeNodeUuid = newParentTreeNodeUuid;
+ this.moveToParentNode = moveToParentNode;
+ }
+
+ public RemotingMoveTaxonOperation(Object source,
+ boolean async,
+ TaxonNode taxonNodeToMove,
+ TaxonNode newParentTreeNode,
+ boolean moveToParentNode) {
+ super(LABEL, Action.Update, source,async);
+ taxonNodesToMoveUuid = new HashSet<UUID>();
+ taxonNodesToMoveUuid.add(taxonNodeToMove.getUuid());
+ this.newParentTreeNodeUuid = newParentTreeNode.getUuid();
+ this.moveToParentNode = moveToParentNode;
+ }
+
+ public RemotingMoveTaxonOperation(Object source,
+ boolean async,
+ Set<UUID> taxonNodesToMoveUuid,
+ TaxonNode newParentTreeNode,
+ boolean moveToParentNode) {
+ super(LABEL, Action.Update, source,async);
+ this.taxonNodesToMoveUuid = taxonNodesToMoveUuid;
+ this.newParentTreeNodeUuid = newParentTreeNode.getUuid();
+ this.moveToParentNode = moveToParentNode;
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.operation.RemotingCdmUpdateOperation#doUpdateExecute(org.eclipse.core.runtime.IProgressMonitor, org.eclipse.core.runtime.IAdaptable)
+ */
+ @Override
+ protected UpdateResult doUpdateExecute(IProgressMonitor monitor, IAdaptable info) throws Exception {
+ return CdmApplicationState.getService(ITaxonNodeService.class).moveTaxonNodes(taxonNodesToMoveUuid,
+ newParentTreeNodeUuid);
+ }
+
+}
// $Id$
/**
* Copyright (C) 2007 EDIT
-* European Distributed Institute of Taxonomy
+* European Distributed Institute of Taxonomy
* http://www.e-taxonomy.eu
-*
+*
* The contents of this file are subject to the Mozilla Public License Version 1.1
* See LICENSE.TXT at the top of this package for the full license terms.
*/
import eu.etaxonomy.cdm.model.taxon.Classification;
import eu.etaxonomy.taxeditor.operation.AbstractPersistentPostOperation;
import eu.etaxonomy.taxeditor.operation.IPostOperationEnabled;
+import eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled;
import eu.etaxonomy.taxeditor.store.CdmStore;
/**
@Deprecated // we do not undo creation of elements
public class CreateClassification extends AbstractPersistentPostOperation {
- private Classification classification;
-
+ private final Classification classification;
+
/**
* <p>Constructor for SaveClassificationOperation.</p>
*
*/
public CreateClassification(String label, IUndoContext undoContext, Classification classification,
IPostOperationEnabled postOperationEnabled,
- IConversationEnabled conversationEnabled) {
- super(label, undoContext, postOperationEnabled, conversationEnabled);
-
+ IConversationEnabled conversationEnabled,
+ ICdmEntitySessionEnabled cdmEntitiySessionEnabled) {
+ super(label, undoContext, postOperationEnabled, conversationEnabled, cdmEntitiySessionEnabled);
+
this.classification = classification;
-
+
}
-
+
/* (non-Javadoc)
* @see org.eclipse.core.commands.operations.AbstractOperation#execute(org.eclipse.core.runtime.IProgressMonitor, org.eclipse.core.runtime.IAdaptable)
*/
throws ExecutionException {
bind();
monitor.worked(20);
-
+
if(classification.getReference() == null){
Reference reference = ReferenceFactory.newGeneric();
reference.setTitleCache(classification.getTitleCache());
classification.setReference(reference);
}
-
+
CdmStore.getService(IClassificationService.class).saveOrUpdate(classification);
-
+
monitor.worked(40);
return postExecute(classification);
// $Id$
/**
* Copyright (C) 2007 EDIT
-* European Distributed Institute of Taxonomy
+* European Distributed Institute of Taxonomy
* http://www.e-taxonomy.eu
-*
+*
* The contents of this file are subject to the Mozilla Public License Version 1.1
* See LICENSE.TXT at the top of this package for the full license terms.
*/
import eu.etaxonomy.cdm.model.description.PolytomousKey;
import eu.etaxonomy.taxeditor.operation.AbstractPersistentPostOperation;
import eu.etaxonomy.taxeditor.operation.IPostOperationEnabled;
+import eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled;
import eu.etaxonomy.taxeditor.store.CdmStore;
/**
@Deprecated // we do not undo creation of elements
public class CreatePolytomousKey extends AbstractPersistentPostOperation {
- private PolytomousKey key;
+ private final PolytomousKey key;
/**
* @param label
IUndoContext undoContext,
PolytomousKey key,
IPostOperationEnabled postOperationEnabled,
- IConversationEnabled conversationEnabled) {
- super(label, undoContext, postOperationEnabled, conversationEnabled);
+ IConversationEnabled conversationEnabled,
+ ICdmEntitySessionEnabled cdmEntitySessionEnabled) {
+ super(label, undoContext, postOperationEnabled, conversationEnabled, cdmEntitySessionEnabled);
this.key = key;
}
monitor.worked(20);
CdmStore.getService(IPolytomousKeyService.class).saveOrUpdate(key);
monitor.worked(40);
-
+
return postExecute(key);
}
import eu.etaxonomy.taxeditor.model.MessagingUtils;
import eu.etaxonomy.taxeditor.operation.AbstractPersistentPostOperation;
import eu.etaxonomy.taxeditor.operation.IPostOperationEnabled;
+import eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled;
import eu.etaxonomy.taxeditor.store.CdmStore;
/**
@Deprecated // we do not undo creation of elements
public class CreateTaxonNode extends AbstractPersistentPostOperation {
- private Taxon newTaxon;
+ private final Taxon newTaxon;
private TaxonNode childTaxonNode;
* @param parentNode a {@link eu.etaxonomy.cdm.model.taxon.ITaxonTreeNode} object.
* @param conversationEnabled a {@link eu.etaxonomy.cdm.api.conversation.IConversationEnabled} object.
*/
- public CreateTaxonNode(String label, IUndoContext undoContext,
- ITaxonTreeNode parentNode, TaxonNameBase<?, ?> name, IPostOperationEnabled postOperationEnabled,
- IConversationEnabled conversationEnabled) {
- super(label, undoContext, parentNode, postOperationEnabled, conversationEnabled);
+ public CreateTaxonNode(String label,
+ IUndoContext undoContext,
+ ITaxonTreeNode parentNode, TaxonNameBase<?, ?> name,
+ IPostOperationEnabled postOperationEnabled,
+ IConversationEnabled conversationEnabled,
+ ICdmEntitySessionEnabled cdmEntitySessionEnabled) {
+ super(label, undoContext, parentNode, postOperationEnabled, conversationEnabled, cdmEntitySessionEnabled);
newTaxon = Taxon.NewInstance(name, null);
}
* @param parentNode a {@link eu.etaxonomy.cdm.model.taxon.ITaxonTreeNode} object.
* @param conversationEnabled a {@link eu.etaxonomy.cdm.api.conversation.IConversationEnabled} object.
*/
- public CreateTaxonNode(String label, IUndoContext undoContext,
- ITaxonTreeNode parentNode, Taxon taxon, IPostOperationEnabled postOperationEnabled,
- IConversationEnabled conversationEnabled) {
- super(label, undoContext, parentNode, postOperationEnabled, conversationEnabled);
+ public CreateTaxonNode(String label,
+ IUndoContext undoContext,
+ ITaxonTreeNode parentNode,
+ Taxon taxon,
+ IPostOperationEnabled postOperationEnabled,
+ IConversationEnabled conversationEnabled,
+ ICdmEntitySessionEnabled cdmEntitySessionEnabled) {
+ super(label, undoContext, parentNode, postOperationEnabled, conversationEnabled, cdmEntitySessionEnabled);
this.newTaxon = taxon;
}
+++ /dev/null
-### ************ APPENDER ***********************************###
-
-### direct log messages to stdout ###
-log4j.appender.stdout=org.apache.log4j.ConsoleAppender
-log4j.appender.stdout.Target=System.out
-log4j.appender.stdout.layout=org.apache.log4j.PatternLayout
-log4j.appender.stdout.layout.ConversionPattern=%d{ABSOLUTE} %5p %c{1}:%L - %m%n
-
-### direct messages to file hibernate.log ###
-log4j.appender.file=org.apache.log4j.FileAppender
-log4j.appender.file.File=taxeditor.log
-log4j.appender.file.layout=org.apache.log4j.PatternLayout
-log4j.appender.file.layout.ConversionPattern=%d{ABSOLUTE} %5p %c{1}:%L - %m%n
-
-### ************* LOG LEVELS *********************************###
-
-### set log levels - for more verbose logging change 'info' to 'debug' ###
-### levels: error, warn, debug, info
-log4j.rootLogger=WARN, stdout
-
-### set directory-specific levels below
-
-### basic level for editor directory
-log4j.logger.eu.etaxonomy.taxeditor.editor = INFO, stdout
-
-log4j.logger.eu.etaxonomy.taxeditor.editor.handler = INFO, stdout
-
-### log level for conversation handler
-#log4j.logger.eu.etaxonomy.cdm.api.application = DEBUG, stdout
Bundle-ManifestVersion: 2
Bundle-Name: Printpublisher Bundle
Bundle-SymbolicName: eu.etaxonomy.taxeditor.printpublisher;singleton:=true
-Bundle-Version: 3.8.0.qualifier
+Bundle-Version: 3.12.0.qualifier
Require-Bundle: org.eclipse.osgi,
org.eclipse.ui,
eu.etaxonomy.taxeditor.cdmlib,
<parent>
<artifactId>taxeditor-parent</artifactId>
<groupId>eu.etaxonomy</groupId>
- <version>3.8.0-SNAPSHOT</version>
+ <version>3.12.0-SNAPSHOT</version>
</parent>
<modelVersion>4.0.0</modelVersion>
Bundle-ManifestVersion: 2
Bundle-Name: DataStore Bundle
Bundle-SymbolicName: eu.etaxonomy.taxeditor.store;singleton:=true
-Bundle-Version: 3.8.0.qualifier
+Bundle-Version: 3.12.0.qualifier
Bundle-Activator: eu.etaxonomy.taxeditor.store.internal.TaxeditorStorePlugin
Bundle-Vendor: EDIT
Export-Package: eu.etaxonomy.cdm,
eu.etaxonomy.taxeditor.ui.section.supplemental,
eu.etaxonomy.taxeditor.ui.section.taxon,
eu.etaxonomy.taxeditor.ui.selection,
+ eu.etaxonomy.taxeditor.util,
eu.etaxonomy.taxeditor.view,
eu.etaxonomy.taxeditor.view.datasource,
eu.etaxonomy.taxeditor.view.datasource.handler,
org.eclipse.ui.editors.text,
org.eclipse.ui.forms.widgets,
org.eclipse.ui.ide.undo,
- org.osgi.framework
+ org.osgi.framework,
+ org.osgi.service.prefs;version="1.1.1"
Bundle-ActivationPolicy: lazy
Bundle-RequiredExecutionEnvironment: JavaSE-1.6
Bundle-ClassPath: .,
LanguageEditorPreferencePage_RestartRequired=After changing the default language, a restart is required,\nin order for the new settings to take effect.\r
OrderPreferencePage_NewNavigatorWindowRequired=After changing the order of the taxon nodes, closing and reopen of the taxon navigator is required.\r
OrderPreferencePage_PleaseReopenNavigator=Please close and reopen the taxon navigator.\r
-UriWithLabelElement_URL_NOT_SAVED=URL won't be saved\! \r
+UriWithLabelElement_URL_NOT_SAVED=URI won't be saved\! \r
UriWithLabelElement_COULD_NOT_OPEN_BROWSER=Could not open external browser. URI is invalid.\r
UriWithLabelElement_INVALID_URL=Invalid URI\r
UriWithLabelElement_OPEN_EXTERNAL_BROWSER=Open in external browser\r
LanguageEditorPreferencePage_PleaseRestart=Bitte neu starten
LanguageEditorPreferencePage_RestartRequired=Nach dem Wechsel der Standardsprache ist ein Neustart erforderlich.
OrderPreferencePage_NewNavigatorWindowRequired=Nach dem Ändern der Taxon Sortierung, ist das Schließen und erneute Öffnen des taxon Navigators erforderlich.
-UriWithLabelElement_URL_NOT_SAVED=URL wird nicht gespeichert\!
+UriWithLabelElement_URL_NOT_SAVED=URI wird nicht gespeichert\!
UriWithLabelElement_COULD_NOT_OPEN_BROWSER=Externer Browser konnte nicht geöffnet werden. URI ist ung\u00FCtlig.
UriWithLabelElement_INVALID_URL=Ung\u00FCltige URI
UriWithLabelElement_OPEN_EXTERNAL_BROWSER=Im Browser öffnen
\ No newline at end of file
id="eu.etaxonomy.taxeditor.view.derivateSearch.DerivateSearchView"
name="%view.name.6"
restorable="true">
+ </view>
+ <view
+ allowMultiple="false"
+ class="eu.etaxonomy.taxeditor.view.sessions.SessionsViewPart"
+ id="eu.etaxonomy.taxeditor.view.sessions.SessionsViewPart"
+ name="Sessions"
+ restorable="false">
</view>
</extension>
<extension
</reference>
</visibleWhen>
</command>
+ <command
+ commandId="org.eclipse.ui.views.showView"
+ label="Sessions"
+ style="push">
+ <parameter
+ name="org.eclipse.ui.views.showView.viewId"
+ value="eu.etaxonomy.taxeditor.view.sessions.SessionsViewPart">
+ </parameter>
+ </command>
</menu>
</menuContribution>
<menuContribution
</menuContribution>
<menuContribution
locationURI="menu:org.eclipse.ui.main.menu.file?after=eu.etaxonomy.taxeditor.application.filemenu.io">
+ <command
+ commandId="eu.etaxonomy.taxeditor.store.operations.showRemotingLoginWindow"
+ label="Connect"
+ style="push">
+ </command>
<command
commandId="eu.etaxonomy.taxeditor.store.operations.showLoginWindow"
label="%command.label.5"
style="push">
+ <visibleWhen
+ checkEnabled="true">
+ <reference
+ definitionId="isUserLoggedIn">
+ </reference>
+ </visibleWhen>
+ </command>
+ <command
+ commandId="eu.etaxonomy.taxeditor.store.operations.reconnect"
+ label="Re-Connect"
+ style="push">
+ <visibleWhen
+ checkEnabled="true">
+ <reference
+ definitionId="isUserLoggedIn">
+ </reference>
+ </visibleWhen>
</command>
<separator
name="eu.etaxonomy.taxeditor.application.filemenu.login"
</activeWhen>
</handler>
<handler
- class="eu.etaxonomy.taxeditor.handler.ShowLoginWindowHandler"
- commandId="eu.etaxonomy.taxeditor.store.operations.showLoginWindow">
- <enabledWhen>
- <reference
- definitionId="isUserLoggedIn">
- </reference></enabledWhen>
+ class="eu.etaxonomy.taxeditor.handler.ShowRemotingLoginWindowHandler"
+ commandId="eu.etaxonomy.taxeditor.store.operations.showRemotingLoginWindow">
</handler>
<handler
class="eu.etaxonomy.taxeditor.handler.OpenPasswordWizzardHandler"
</reference>
</activeWhen>
</handler>
+ <handler
+ class="eu.etaxonomy.taxeditor.handler.SwitchUserHandler"
+ commandId="eu.etaxonomy.taxeditor.store.operations.showLoginWindow">
+ <activeWhen>
+ <reference
+ definitionId="isRemoting">
+ </reference>
+ </activeWhen>
+ </handler>
</extension>
<extension
name="%extension.name.0"
name="%command.name.3">
</command>
<command
+ defaultHandler="eu.etaxonomy.taxeditor.handler.ShowLoginWindowHandler"
id="eu.etaxonomy.taxeditor.store.operations.showLoginWindow"
name="%command.name.4">
</command>
+ <command
+ id="eu.etaxonomy.taxeditor.store.operations.showRemotingLoginWindow"
+ name="Connect">
+ </command>
+ <command
+ defaultHandler="eu.etaxonomy.taxeditor.handler.ReconnectHandler"
+ id="eu.etaxonomy.taxeditor.store.operations.reconnect"
+ name="Re-Connect">
+ </command>
<command
defaultHandler="eu.etaxonomy.taxeditor.editor.definedterm.handler.OpenDefinedTermEditorHandler"
id="eu.etaxonomy.taxeditor.store.openDefinedTermEditor"
id="eu.etaxonomy.taxeditor.editor.definedTerms.delete"
name="%command.name.14">
</command>
+ <command
+ defaultHandler="eu.etaxonomy.taxeditor.handler.OpenInspectSessionsHandler"
+ id="eu.etaxonomy.taxeditor.store.open.InspectSessionsDialog"
+ name="Inspect Active Session">
+ </command>
<command
defaultHandler="eu.etaxonomy.taxeditor.handler.OpenHandler"
id="eu.etaxonomy.taxeditor.store.open"
<parent>
<groupId>eu.etaxonomy</groupId>
<artifactId>taxeditor-parent</artifactId>
- <version>3.8.0-SNAPSHOT</version>
+ <version>3.12.0-SNAPSHOT</version>
</parent>
<modelVersion>4.0.0</modelVersion>
import eu.etaxonomy.cdm.database.DataSourceNotFoundException;
import eu.etaxonomy.cdm.database.ICdmDataSource;
import eu.etaxonomy.cdm.model.name.NomenclaturalCode;
-import eu.etaxonomy.cdm.remote.CdmPersistentRemoteSource;
-import eu.etaxonomy.cdm.remote.CdmRemoteSourceException;
-import eu.etaxonomy.cdm.remote.ICdmRemoteSource;
+
import eu.etaxonomy.taxeditor.model.MementoHelper;
import eu.etaxonomy.taxeditor.model.MessagingUtils;
import eu.etaxonomy.taxeditor.preference.PreferencesUtil;
+import eu.etaxonomy.taxeditor.remoting.source.CdmPersistentRemoteSource;
+import eu.etaxonomy.taxeditor.remoting.source.CdmRemoteSourceException;
+import eu.etaxonomy.taxeditor.remoting.source.ICdmRemoteSource;
import eu.etaxonomy.taxeditor.store.CdmStore;
import eu.etaxonomy.taxeditor.store.internal.TaxeditorStorePlugin;
public class CdmDataSourceRepository{
--- /dev/null
+// $Id$
+/**
+* Copyright (C) 2015 EDIT
+* European Distributed Institute of Taxonomy
+* http://www.e-taxonomy.eu
+*
+* The contents of this file are subject to the Mozilla Public License Version 1.1
+* See LICENSE.TXT at the top of this package for the full license terms.
+*/
+package eu.etaxonomy.taxeditor.editor;
+
+import java.util.List;
+import java.util.Map;
+
+import eu.etaxonomy.taxeditor.session.ICdmEntitySession;
+import eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled;
+import eu.etaxonomy.taxeditor.store.CdmStore;
+
+/**
+ * @author cmathew
+ * @date 5 Feb 2015
+ *
+ */
+public abstract class CdmEntitySessionInput implements ICdmEntitySessionEnabled {
+
+ private ICdmEntitySession cdmEntitySession;
+
+ public CdmEntitySessionInput(boolean init) {
+ if(init) {
+ initSession();
+ }
+ }
+
+ protected void initSession() {
+ cdmEntitySession = CdmStore.getCurrentSessionManager().newSession(this, true);
+ }
+
+ @Override
+ public ICdmEntitySession getCdmEntitySession() {
+ return cdmEntitySession;
+ }
+
+ public void bind() {
+ cdmEntitySession.bind();
+ }
+
+ public void dispose() {
+ cdmEntitySession.dispose();
+ }
+
+ public abstract void merge();
+
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled#getPropertyPathsMap()
+ */
+ @Override
+ public Map<Object, List<String>> getPropertyPathsMap() {
+ // TODO Auto-generated method stub
+ return null;
+ }
+
+}
*/\r
package eu.etaxonomy.taxeditor.editor.definedterm;\r
\r
+import java.util.ArrayList;\r
+import java.util.List;\r
+import java.util.Map;\r
+import java.util.Set;\r
+\r
import org.eclipse.core.runtime.IProgressMonitor;\r
import org.eclipse.jface.action.GroupMarker;\r
import org.eclipse.jface.action.MenuManager;\r
\r
import eu.etaxonomy.cdm.api.conversation.ConversationHolder;\r
import eu.etaxonomy.cdm.api.conversation.IConversationEnabled;\r
+import eu.etaxonomy.cdm.api.service.IVocabularyService;\r
import eu.etaxonomy.cdm.model.common.CdmBase;\r
+import eu.etaxonomy.cdm.model.common.DefinedTermBase;\r
import eu.etaxonomy.cdm.model.common.OrderedTermBase;\r
+import eu.etaxonomy.cdm.model.common.TermVocabulary;\r
import eu.etaxonomy.cdm.persistence.hibernate.CdmDataChangeMap;\r
import eu.etaxonomy.taxeditor.editor.definedterm.input.TermEditorInput;\r
import eu.etaxonomy.taxeditor.model.IDirtyMarkable;\r
import eu.etaxonomy.taxeditor.operation.IPostOperationEnabled;\r
+import eu.etaxonomy.taxeditor.session.ICdmEntitySession;\r
+import eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled;\r
import eu.etaxonomy.taxeditor.store.CdmStore;\r
import eu.etaxonomy.taxeditor.ui.element.LayoutConstants;\r
\r
* @date 3 Jan 2012\r
*\r
*/\r
-public class DefinedTermEditor extends EditorPart implements IConversationEnabled, ISelectionListener, IDirtyMarkable, IPostOperationEnabled {\r
+public class DefinedTermEditor extends EditorPart implements IConversationEnabled, ISelectionListener, IDirtyMarkable, IPostOperationEnabled, ICdmEntitySessionEnabled {\r
\r
public static final String ID = "eu.etaxonomy.taxeditor.editor.definedTerm";\r
\r
private ISelectionService selectionService;\r
private boolean dirty;\r
\r
+ private final ICdmEntitySession cdmEntitySession;\r
\r
\r
private final int dndOperations = DND.DROP_COPY | DND.DROP_MOVE;\r
public DefinedTermEditor() {\r
super();\r
conversation = CdmStore.createConversation();\r
+ cdmEntitySession = CdmStore.getCurrentSessionManager().newSession(this, true);\r
}\r
\r
@Override\r
@Override\r
public void doSave(IProgressMonitor monitor) {\r
getConversationHolder().commit();\r
+ CdmStore.getService(IVocabularyService.class).merge(new ArrayList<TermVocabulary>(getRootEntities()));\r
setDirty(false);\r
getDefinedTermEditorInput().initialiseVocabularies();\r
+ viewer.refresh();\r
}\r
\r
\r
public void setFocus() {\r
viewer.getControl().setFocus();\r
getConversationHolder().bind();\r
+ cdmEntitySession.bind();\r
}\r
\r
@Override\r
}\r
}\r
\r
+ @Override\r
+ public void dispose() {\r
+ cdmEntitySession.dispose();\r
+ super.dispose();\r
+ }\r
+\r
+ /* (non-Javadoc)\r
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled#getCdmEntitySession()\r
+ */\r
+ @Override\r
+ public ICdmEntitySession getCdmEntitySession() {\r
+ return cdmEntitySession;\r
+ }\r
+\r
+ /* (non-Javadoc)\r
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled#getRootEntities()\r
+ */\r
+ @Override\r
+ public Set<TermVocabulary<DefinedTermBase>> getRootEntities() {\r
+ return getDefinedTermEditorInput().getVocabularies();\r
+ }\r
+\r
+ /* (non-Javadoc)\r
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled#getPropertyPathsMap()\r
+ */\r
+ @Override\r
+ public Map<Object, List<String>> getPropertyPathsMap() {\r
+ // TODO Auto-generated method stub\r
+ return null;\r
+ }\r
+\r
\r
}
\ No newline at end of file
// $Id$\r
/**\r
* Copyright (C) 2009 EDIT\r
-* European Distributed Institute of Taxonomy \r
+* European Distributed Institute of Taxonomy\r
* http://www.e-taxonomy.eu\r
-* \r
+*\r
* The contents of this file are subject to the Mozilla Public License Version 1.1\r
* See LICENSE.TXT at the top of this package for the full license terms.\r
*/\r
import eu.etaxonomy.taxeditor.model.MessagingUtils;\r
import eu.etaxonomy.taxeditor.operation.AbstractPostTaxonOperation;\r
import eu.etaxonomy.taxeditor.operation.IPostOperationEnabled;\r
+import eu.etaxonomy.taxeditor.store.CdmStore;\r
import eu.etaxonomy.taxeditor.store.StoreUtil;\r
\r
/**\r
*/\r
public class CreateDefinedTermOperation extends AbstractPostTaxonOperation {\r
\r
- \r
\r
- private TermBase parentTermBase;\r
- private TermEditorInput definedTermInput;\r
+\r
+ private final TermBase parentTermBase;\r
+ private final TermEditorInput definedTermInput;\r
\r
/**\r
* @param label\r
* @param postOperationEnabled\r
*/\r
public CreateDefinedTermOperation(String label,\r
- IUndoContext undoContext, \r
+ IUndoContext undoContext,\r
TermBase termBase,\r
TermEditorInput definedTermInput,\r
IPostOperationEnabled postOperationEnabled) {\r
@Override\r
public IStatus execute(IProgressMonitor monitor, IAdaptable info)\r
throws ExecutionException {\r
- \r
+\r
DefinedTermBase newTerm = definedTermInput.getTermType().getEmptyDefinedTermBase();\r
if (newTerm == null) {\r
- IStatus status = \r
- new Status(IStatus.CANCEL, \r
- StoreUtil.getPluginId(), \r
+ IStatus status =\r
+ new Status(IStatus.CANCEL,\r
+ StoreUtil.getPluginId(),\r
"Creation of term corresponding to type '" + definedTermInput.getTermType().getMessage() + "' is not yet supported");\r
MessagingUtils.warningDialog("Cannot create term", newTerm, status);\r
return status;\r
}\r
- \r
+ newTerm = CdmStore.getCurrentApplicationConfiguration().getTermService().save(newTerm);\r
+\r
if (parentTermBase instanceof TermVocabulary){\r
TermVocabulary vocabulary = (TermVocabulary) parentTermBase;\r
vocabulary.addTerm(newTerm);\r
} else if (parentTermBase instanceof DefinedTermBase) {\r
- DefinedTermBase parent = (DefinedTermBase) parentTermBase; \r
- parent.addIncludes(newTerm); \r
+ DefinedTermBase parent = (DefinedTermBase) parentTermBase;\r
+ parent.addIncludes(newTerm);\r
TermVocabulary vocabulary = parent.getVocabulary();\r
vocabulary.addTerm(newTerm);\r
}\r
- \r
+\r
return postExecute(newTerm);\r
}\r
\r
// $Id$\r
/**\r
* Copyright (C) 2009 EDIT\r
-* European Distributed Institute of Taxonomy \r
+* European Distributed Institute of Taxonomy\r
* http://www.e-taxonomy.eu\r
-* \r
+*\r
* The contents of this file are subject to the Mozilla Public License Version 1.1\r
* See LICENSE.TXT at the top of this package for the full license terms.\r
*/\r
*/\r
public class CreateTermVocabularyOperation extends AbstractPostTaxonOperation {\r
\r
- private TermEditorInput definedEditorInput;\r
- \r
+ private final TermEditorInput definedEditorInput;\r
+\r
/**\r
* @param label\r
* @param undoContext\r
* @param postOperationEnabled\r
*/\r
public CreateTermVocabularyOperation(String label,\r
- IUndoContext undoContext, \r
- TermEditorInput definedEditorInput, \r
+ IUndoContext undoContext,\r
+ TermEditorInput definedEditorInput,\r
IPostOperationEnabled postOperationEnabled) {\r
super(label, undoContext, postOperationEnabled);\r
this.definedEditorInput = definedEditorInput;\r
@Override\r
public IStatus execute(IProgressMonitor monitor, IAdaptable info)\r
throws ExecutionException {\r
- \r
- TermVocabulary termVocabulary = \r
+\r
+ TermVocabulary termVocabulary =\r
TermVocabulary.NewInstance(definedEditorInput.getTermType(),\r
- null, \r
- "Untitled", \r
- null, \r
- null); \r
- \r
- CdmStore.getService(IVocabularyService.class).save(termVocabulary);\r
+ null,\r
+ "Untitled",\r
+ null,\r
+ null);\r
+\r
+ termVocabulary = CdmStore.getService(IVocabularyService.class).save(termVocabulary);\r
definedEditorInput.getVocabularies().add(termVocabulary);\r
- \r
+\r
return postExecute(termVocabulary);\r
}\r
\r
// $Id$\r
/**\r
* Copyright (C) 2009 EDIT\r
-* European Distributed Institute of Taxonomy \r
+* European Distributed Institute of Taxonomy\r
* http://www.e-taxonomy.eu\r
-* \r
+*\r
* The contents of this file are subject to the Mozilla Public License Version 1.1\r
* See LICENSE.TXT at the top of this package for the full license terms.\r
*/\r
import eu.etaxonomy.cdm.api.service.DeleteResult;\r
import eu.etaxonomy.cdm.api.service.ITermService;\r
import eu.etaxonomy.cdm.api.service.IVocabularyService;\r
-import eu.etaxonomy.cdm.api.service.exception.DataChangeNoRollbackException;\r
-import eu.etaxonomy.cdm.model.common.DefinedTerm;\r
import eu.etaxonomy.cdm.model.common.DefinedTermBase;\r
import eu.etaxonomy.cdm.model.common.TermBase;\r
import eu.etaxonomy.cdm.model.common.TermVocabulary;\r
*/\r
public class DeleteTermBaseOperation extends AbstractPostTaxonOperation {\r
\r
- private TermEditorInput definedEditorInput;\r
- private TermBase termBase;\r
+ private final TermEditorInput definedEditorInput;\r
+ private final TermBase termBase;\r
private DefinedTermEditor definedTermEditor;\r
/**\r
* @param label\r
* @param undoContext\r
* @param postOperationEnabled\r
*/\r
- public DeleteTermBaseOperation(String label, \r
- IUndoContext undoContext, \r
+ public DeleteTermBaseOperation(String label,\r
+ IUndoContext undoContext,\r
TermBase termBase,\r
TermEditorInput definedEditorInput,\r
IPostOperationEnabled postOperationEnabled) {\r
super(label, undoContext, postOperationEnabled);\r
this.termBase = termBase;\r
- this.definedEditorInput = definedEditorInput; \r
+ this.definedEditorInput = definedEditorInput;\r
}\r
\r
/* (non-Javadoc)\r
@Override\r
public IStatus execute(IProgressMonitor monitor, IAdaptable info)\r
throws ExecutionException {\r
- \r
- \r
- \r
+\r
+\r
+\r
if (termBase instanceof TermVocabulary) {\r
if (((TermVocabulary)termBase).getCreatedBy() == null) {\r
IStatus status = new Status(IStatus.CANCEL, StoreUtil.getPluginId(), "This is a CDM system vocabulary");\r
MessagingUtils.warningDialog("Cannot delete vocabulary", termBase, status);\r
return status;\r
}\r
- \r
+\r
if (!((TermVocabulary)termBase).getTerms().isEmpty()) {\r
IStatus status = new Status(IStatus.CANCEL, StoreUtil.getPluginId(), "Delete all terms from this vocaulary before deleting the vocabulary.");\r
MessagingUtils.warningDialog("Vocabulary not empty", termBase, status);\r
return status;\r
- } \r
+ }\r
\r
- definedEditorInput.getVocabularies().remove((TermVocabulary)termBase); \r
- \r
- DeleteResult result = CdmStore.getService(IVocabularyService.class).delete((TermVocabulary)termBase);\r
+ definedEditorInput.getVocabularies().remove(termBase);\r
+\r
+ DeleteResult result = CdmStore.getService(IVocabularyService.class).delete(termBase.getUuid());\r
if (result.isError()){\r
StringBuffer errorString = new StringBuffer();\r
for (Exception e:result.getExceptions()){\r
}\r
MessageDialog.openError(null, "Delete failed", errorString.toString());\r
}\r
- \r
+\r
} else if (termBase instanceof DefinedTermBase) {\r
- \r
- \r
+\r
+\r
DefinedTermBase definedTermBase = (DefinedTermBase) termBase;\r
- \r
+\r
if (((DefinedTermBase)termBase).getCreatedBy() == null) {\r
IStatus status = new Status(IStatus.CANCEL, StoreUtil.getPluginId(), "This is a CDM system defined term");\r
MessagingUtils.warningDialog("Cannot delete defined term", termBase, status);\r
return status;\r
}\r
if(!definedTermBase.getIncludes().isEmpty()){\r
- IStatus status = new Status(IStatus.CANCEL, StoreUtil.getPluginId(), "This term includes other terms. Please delete the included terms before deleting this term."); \r
+ IStatus status = new Status(IStatus.CANCEL, StoreUtil.getPluginId(), "This term includes other terms. Please delete the included terms before deleting this term.");\r
MessagingUtils.warningDialog("Term has included terms", termBase, status);\r
return status;\r
- } \r
- \r
+ }\r
+\r
\r
DefinedTermBase partOf = definedTermBase.getPartOf();\r
if(partOf != null){\r
partOf.removeIncludes(definedTermBase);\r
}\r
- \r
+\r
DefinedTermBase kindOf = definedTermBase.getKindOf();\r
if(kindOf != null){\r
definedTermBase.removeGeneralization(kindOf);\r
}\r
- \r
+\r
TermVocabulary vocabulary = definedTermBase.getVocabulary();\r
if(vocabulary != null){\r
vocabulary.removeTerm(definedTermBase);\r
}\r
- \r
- DeleteResult result = CdmStore.getService(ITermService.class).delete((DefinedTermBase)termBase);\r
- \r
+\r
+ DeleteResult result = CdmStore.getService(ITermService.class).delete(termBase.getUuid());\r
+\r
if (result.isError()){\r
StringBuffer errorString = new StringBuffer();\r
for (Exception e:result.getExceptions()){\r
MessageDialog.openError(null, "Delete failed", errorString.toString());\r
}\r
}\r
- \r
+\r
return postExecute(termBase);\r
}\r
\r
--- /dev/null
+package eu.etaxonomy.taxeditor.handler;
+
+import org.eclipse.core.commands.AbstractHandler;
+import org.eclipse.core.commands.ExecutionEvent;
+import org.eclipse.core.commands.ExecutionException;
+import org.eclipse.jface.viewers.ISelection;
+import org.eclipse.jface.viewers.IStructuredSelection;
+import org.eclipse.ui.handlers.HandlerUtil;
+
+public class CreateFieldUnitHandler extends AbstractHandler {
+
+ @Override
+ public Object execute(ExecutionEvent event) throws ExecutionException {
+ ISelection currentSelection = HandlerUtil.getCurrentSelection(event);
+ if(currentSelection instanceof IStructuredSelection){
+ System.out.println(currentSelection);
+ }
+ return null;
+ }
+
+}
--- /dev/null
+// $Id$
+/**
+* Copyright (C) 2015 EDIT
+* European Distributed Institute of Taxonomy
+* http://www.e-taxonomy.eu
+*
+* The contents of this file are subject to the Mozilla Public License Version 1.1
+* See LICENSE.TXT at the top of this package for the full license terms.
+*/
+package eu.etaxonomy.taxeditor.handler;
+
+import java.util.Collection;
+
+import org.eclipse.core.commands.AbstractHandler;
+import org.eclipse.core.commands.ExecutionEvent;
+import org.eclipse.core.commands.ExecutionException;
+import org.eclipse.core.commands.IHandler;
+import org.eclipse.swt.SWT;
+
+import eu.etaxonomy.cdm.model.common.CdmBase;
+import eu.etaxonomy.taxeditor.model.AbstractUtility;
+import eu.etaxonomy.taxeditor.model.MessagingUtils;
+import eu.etaxonomy.taxeditor.session.ICdmEntitySession;
+import eu.etaxonomy.taxeditor.store.CdmStore;
+import eu.etaxonomy.taxeditor.view.sessions.InspectSessionsDialog;
+
+/**
+ * @author cmathew
+ * @date 18 Feb 2015
+ *
+ */
+public class OpenInspectSessionsHandler extends AbstractHandler implements IHandler {
+
+
+ /* (non-Javadoc)
+ * @see org.eclipse.core.commands.IHandler#execute(org.eclipse.core.commands.ExecutionEvent)
+ */
+ /** {@inheritDoc} */
+ @Override
+ public Object execute(ExecutionEvent event) throws ExecutionException {
+
+ Object principal = CdmStore.getCurrentAuthentiation().getPrincipal();
+
+ ICdmEntitySession activeSession = CdmStore.getCurrentSessionManager().getActiveSession();
+
+ if(activeSession == null) {
+ MessagingUtils.warningDialog("No Active Session", this, "Active Session is null");
+ } else {
+ Collection<CdmBase> rootEntities = activeSession.getRootEntities();
+ if(rootEntities == null || rootEntities.isEmpty()) {
+ MessagingUtils.warningDialog("No Root Entities", this, "No root entities to inspect");
+ } else {
+ InspectSessionsDialog dialog = new InspectSessionsDialog(AbstractUtility.getShell(), SWT.NONE);
+ dialog.open();
+ }
+
+ }
+
+ return null;
+
+ }
+}
--- /dev/null
+// $Id$
+/**
+* Copyright (C) 2007 EDIT
+* European Distributed Institute of Taxonomy
+* http://www.e-taxonomy.eu
+*
+* The contents of this file are subject to the Mozilla Public License Version 1.1
+* See LICENSE.TXT at the top of this package for the full license terms.
+*/
+
+package eu.etaxonomy.taxeditor.handler;
+
+import org.eclipse.core.commands.AbstractHandler;
+import org.eclipse.core.commands.ExecutionEvent;
+import org.eclipse.core.commands.ExecutionException;
+import org.eclipse.core.commands.IHandler;
+import org.eclipse.swt.SWT;
+import org.eclipse.ui.handlers.HandlerUtil;
+
+import eu.etaxonomy.taxeditor.remoting.source.CdmRemoteSource;
+import eu.etaxonomy.taxeditor.store.CdmStore;
+import eu.etaxonomy.taxeditor.ui.dialog.RemotingLoginDialog;
+
+/**
+ *
+ *
+ * @author c.mathew
+ */
+public class ReconnectHandler extends AbstractHandler implements IHandler {
+
+ /* (non-Javadoc)
+ * @see org.eclipse.core.commands.IHandler#execute(org.eclipse.core.commands.ExecutionEvent)
+ */
+ /** {@inheritDoc} */
+ @Override
+ public Object execute(ExecutionEvent event) throws ExecutionException {
+
+ RemotingLoginDialog loginDialog = new RemotingLoginDialog(HandlerUtil.getActiveShell(event),
+ SWT.DIALOG_TRIM | SWT.APPLICATION_MODAL);
+
+ loginDialog.open((CdmRemoteSource) CdmStore.getActiveCdmSource(), true, true);
+
+ return null;
+
+ }
+}
--- /dev/null
+// $Id$
+/**
+* Copyright (C) 2007 EDIT
+* European Distributed Institute of Taxonomy
+* http://www.e-taxonomy.eu
+*
+* The contents of this file are subject to the Mozilla Public License Version 1.1
+* See LICENSE.TXT at the top of this package for the full license terms.
+*/
+
+package eu.etaxonomy.taxeditor.handler;
+
+import org.eclipse.core.commands.AbstractHandler;
+import org.eclipse.core.commands.ExecutionEvent;
+import org.eclipse.core.commands.ExecutionException;
+import org.eclipse.core.commands.IHandler;
+import org.eclipse.swt.SWT;
+import org.eclipse.ui.handlers.HandlerUtil;
+
+import eu.etaxonomy.taxeditor.ui.dialog.RemotingLoginDialog;
+
+/**
+ *
+ *
+ * @author c.mathew
+ */
+public class ShowRemotingLoginWindowHandler extends AbstractHandler implements IHandler{
+
+ /* (non-Javadoc)
+ * @see org.eclipse.core.commands.IHandler#execute(org.eclipse.core.commands.ExecutionEvent)
+ */
+ /** {@inheritDoc} */
+ @Override
+ public Object execute(ExecutionEvent event) throws ExecutionException {
+
+ RemotingLoginDialog loginDialog = new RemotingLoginDialog(HandlerUtil.getActiveShell(event),
+ SWT.DIALOG_TRIM | SWT.APPLICATION_MODAL);
+ loginDialog.open();
+
+
+ return null;
+
+ }
+}
--- /dev/null
+// $Id$
+/**
+* Copyright (C) 2007 EDIT
+* European Distributed Institute of Taxonomy
+* http://www.e-taxonomy.eu
+*
+* The contents of this file are subject to the Mozilla Public License Version 1.1
+* See LICENSE.TXT at the top of this package for the full license terms.
+*/
+
+package eu.etaxonomy.taxeditor.handler;
+
+import org.eclipse.core.commands.AbstractHandler;
+import org.eclipse.core.commands.ExecutionEvent;
+import org.eclipse.core.commands.ExecutionException;
+import org.eclipse.core.commands.IHandler;
+import org.eclipse.swt.SWT;
+import org.eclipse.ui.handlers.HandlerUtil;
+
+import eu.etaxonomy.taxeditor.remoting.source.CdmRemoteSource;
+import eu.etaxonomy.taxeditor.store.CdmStore;
+import eu.etaxonomy.taxeditor.ui.dialog.RemotingLoginDialog;
+
+/**
+ *
+ *
+ * @author c.mathew
+ */
+public class SwitchUserHandler extends AbstractHandler implements IHandler {
+
+ /* (non-Javadoc)
+ * @see org.eclipse.core.commands.IHandler#execute(org.eclipse.core.commands.ExecutionEvent)
+ */
+ /** {@inheritDoc} */
+ @Override
+ public Object execute(ExecutionEvent event) throws ExecutionException {
+
+ RemotingLoginDialog loginDialog = new RemotingLoginDialog(HandlerUtil.getActiveShell(event),
+ SWT.DIALOG_TRIM | SWT.APPLICATION_MODAL);
+
+ loginDialog.open((CdmRemoteSource) CdmStore.getActiveCdmSource(), false, false);
+
+ return null;
+
+ }
+}
+
--- /dev/null
+package eu.etaxonomy.taxeditor.handler;
+
+import java.util.UUID;
+
+import org.eclipse.core.commands.AbstractParameterValueConverter;
+import org.eclipse.core.commands.ParameterValueConversionException;
+
+public class UuidParameterConverter extends AbstractParameterValueConverter {
+
+ public UuidParameterConverter() {
+ // TODO Auto-generated constructor stub
+ }
+
+ @Override
+ public Object convertToObject(String parameterValue) throws ParameterValueConversionException {
+ return UUID.fromString(parameterValue);
+ }
+
+ @Override
+ public String convertToString(Object parameterValue) throws ParameterValueConversionException {
+ return parameterValue.toString();
+ }
+
+}
// $Id$
/**
* Copyright (C) 2007 EDIT
- * European Distributed Institute of Taxonomy
+ * European Distributed Institute of Taxonomy
* http://www.e-taxonomy.eu
- *
+ *
* The contents of this file are subject to the Mozilla Public License Version 1.1
* See LICENSE.TXT at the top of this package for the full license terms.
*/
* <p>
* Abstract AbstractIOHandler class.
* </p>
- *
+ *
* @author n.hoffmann
* @created Sep 11, 2009
* @version 1.0
* <p>
* Constructor for AbstractIOHandler.
* </p>
- *
+ *
* @param applicationController
* a
* {@link eu.etaxonomy.cdm.api.application.CdmApplicationController}
/**
* Starts the IO process
- *
+ *
* @param configurator
* a CONFIGURATOR object.
*/
public void run(final CONFIGURATOR configurator) {
- // create job
- Job job = createIOJob(configurator);
- // configure the job
- job.setProperty(IProgressConstants.KEEP_PROPERTY, true);
- job.setUser(true);
- // schedule job
- job.schedule();
+ // create job
+ Job job = createIOJob(configurator);
+ run(job);
+ }
+ public void run(Job job) {
+ // configure the job
+ job.setProperty(IProgressConstants.KEEP_PROPERTY, true);
+ job.setUser(true);
+ // schedule job
+ job.schedule();
}
/**
* <p>
* createIOJob
* </p>
- *
+ *
* @param configurator
* a CONFIGURATOR object.
* @return a {@link org.eclipse.core.runtime.jobs.Job} object.
*/
protected abstract Job createIOJob(CONFIGURATOR configurator);
+
}
package eu.etaxonomy.taxeditor.io;
+import java.io.File;
+import java.io.FileOutputStream;
+import java.util.List;
+
import org.eclipse.core.runtime.Assert;
import org.eclipse.core.runtime.IProgressMonitor;
import org.eclipse.core.runtime.IStatus;
import org.eclipse.swt.widgets.Display;
import org.eclipse.ui.IWorkbenchPart;
+import eu.etaxonomy.cdm.api.application.CdmApplicationState;
import eu.etaxonomy.cdm.api.application.ICdmApplicationConfiguration;
import eu.etaxonomy.cdm.api.conversation.IConversationEnabled;
import eu.etaxonomy.cdm.io.common.CdmDefaultExport;
+import eu.etaxonomy.cdm.io.common.ExportResult;
import eu.etaxonomy.cdm.io.common.IExportConfigurator;
import eu.etaxonomy.cdm.io.common.IIoConfigurator;
import eu.etaxonomy.cdm.io.jaxb.JaxbExportConfigurator;
import eu.etaxonomy.cdm.io.sdd.out.SDDExportConfigurator;
+import eu.etaxonomy.cdm.io.service.IIOService;
import eu.etaxonomy.taxeditor.model.CdmProgressMonitorAdapter;
import eu.etaxonomy.taxeditor.model.MessagingUtils;
import eu.etaxonomy.taxeditor.store.StoreUtil;
+import eu.etaxonomy.taxeditor.store.internal.TaxeditorStorePlugin;
/**
* <p>
return job;
}
+ public Job createIOServiceJob(final IExportConfigurator configurator, final File exportFile) {
+ Assert.isNotNull(configurator, "Configuration may not be null");
+
+ final Display display = Display.getCurrent();
+
+ Job job = new Job("Export: " + configurator.getClass().getSimpleName()) {
+ @Override
+ protected IStatus run(IProgressMonitor monitor) {
+ monitor.beginTask("Exporting database. This will take some time.", IProgressMonitor.UNKNOWN);
+ try {
+ IIOService ioService = CdmApplicationState.getIOService();
+
+ ExportResult result = ioService.export(configurator);
+ List<byte[]> dataList = result.getExportData();
+ byte[] exportData = dataList.get(0);
+
+ FileOutputStream stream = new FileOutputStream(exportFile);
+ try {
+ stream.write(exportData);
+ } finally {
+ stream.close();
+ }
+
+ } catch (Exception e) {
+ MessagingUtils.errorDialog("Error exporting data",
+ this,
+ e.getMessage(),
+ TaxeditorStorePlugin.PLUGIN_ID,
+ e,
+ true);
+ }
+ return Status.OK_STATUS;
+ }
+ };
+ return job;
+ }
/**
* @param jaxb
* @return
return (SDDExportConfigurator) getConfigurator(TYPE.Sdd);
}
+
+
}
// $Id$
/**
* Copyright (C) 2007 EDIT
- * European Distributed Institute of Taxonomy
+ * European Distributed Institute of Taxonomy
* http://www.e-taxonomy.eu
- *
+ *
* The contents of this file are subject to the Mozilla Public License Version 1.1
* See LICENSE.TXT at the top of this package for the full license terms.
*/
package eu.etaxonomy.taxeditor.io;
+import java.io.File;
+import java.io.InputStream;
+import java.nio.file.Files;
+import java.nio.file.Path;
+import java.nio.file.Paths;
+
+import org.apache.commons.io.IOUtils;
import org.eclipse.core.runtime.Assert;
import org.eclipse.core.runtime.IProgressMonitor;
import org.eclipse.core.runtime.IStatus;
import org.eclipse.core.runtime.jobs.Job;
import org.eclipse.swt.widgets.Display;
-import eu.etaxonomy.cdm.api.application.ICdmApplicationConfiguration;
+import eu.etaxonomy.cdm.api.application.CdmApplicationState;
import eu.etaxonomy.cdm.api.application.ICdmApplicationConfiguration;
import eu.etaxonomy.cdm.io.common.CdmDefaultImport;
import eu.etaxonomy.cdm.io.common.IImportConfigurator;
+import eu.etaxonomy.cdm.io.common.IImportConfigurator.SOURCE_TYPE;
import eu.etaxonomy.cdm.io.excel.taxa.NormalExplicitImportConfigurator;
import eu.etaxonomy.cdm.io.jaxb.JaxbImportConfigurator;
import eu.etaxonomy.cdm.io.reference.endnote.in.EndnoteImportConfigurator;
import eu.etaxonomy.cdm.io.sdd.in.SDDImportConfigurator;
+import eu.etaxonomy.cdm.io.service.IIOService;
import eu.etaxonomy.cdm.io.specimen.abcd206.in.Abcd206ImportConfigurator;
import eu.etaxonomy.cdm.io.specimen.excel.in.SpecimenCdmExcelImportConfigurator;
import eu.etaxonomy.cdm.io.tcsxml.in.TcsXmlImportConfigurator;
import eu.etaxonomy.taxeditor.model.CdmProgressMonitorAdapter;
import eu.etaxonomy.taxeditor.model.MessagingUtils;
import eu.etaxonomy.taxeditor.store.CdmStore;
+import eu.etaxonomy.taxeditor.store.internal.TaxeditorStorePlugin;
/**
* <p>
* ImportHandler class.
* </p>
- *
+ *
* @author n.hoffmann
* @created Sep 11, 2009
* @version 1.0
* <p>
* NewInstance
* </p>
- *
+ *
* @param applicationConfiguration
* a
* {@link eu.etaxonomy.cdm.api.application.CdmApplicationController}
/**
* Use when importing data into the current application context
- *
+ *
* @param configurator
* a {@link eu.etaxonomy.cdm.io.common.IImportConfigurator}
* object.
monitor.worked(5);
CdmDefaultImport<IImportConfigurator> importer = new CdmDefaultImport<IImportConfigurator>();
- importer.setCdmAppController((ICdmApplicationConfiguration) applicationConfiguration);
+ importer.setCdmAppController(applicationConfiguration);
monitor.worked(5);
try {
}
+ public Job createIOServiceJob(IImportConfigurator configurator, InputStream is, SOURCE_TYPE type) {
+
+ try {
+ return createIOServiceJob(configurator, IOUtils.toByteArray(is), type);
+ } catch (Exception e) {
+ MessagingUtils.errorDialog("Error importing input stream",
+ this,
+ e.getMessage(),
+ TaxeditorStorePlugin.PLUGIN_ID,
+ e,
+ true);
+ }
+ return null;
+ }
+
+ public Job createIOServiceJob(IImportConfigurator configurator, File importFile, SOURCE_TYPE type) {
+ Path path = Paths.get(importFile.toURI());
+ try {
+ return createIOServiceJob(configurator, Files.readAllBytes(path), type);
+ } catch (Exception e) {
+ MessagingUtils.errorDialog("Error importing file",
+ this,
+ e.getMessage(),
+ TaxeditorStorePlugin.PLUGIN_ID,
+ e,
+ true);
+ }
+ return null;
+ }
+
+ public Job createIOServiceJob(final IImportConfigurator configurator, final byte[] data, final SOURCE_TYPE type) {
+ Assert.isNotNull(configurator, "Configuration may not be null");
+ final Display display = Display.getDefault();
+ Job job = new Job("Import: " + configurator.getClass().getSimpleName()) {
+
+ @Override
+ protected IStatus run(IProgressMonitor monitor) {
+ monitor.beginTask("Importing data", IProgressMonitor.UNKNOWN);
+ IIOService ioService = CdmApplicationState.getIOService();
+
+ ioService.importData(configurator, data, type);
+
+ monitor.done();
+
+ display.asyncExec(new Runnable() {
+
+ @Override
+ public void run() {
+ CdmStore.getContextManager().notifyContextRefresh();
+ }
+ });
+
+ return Status.OK_STATUS;
+ }
+ };
+
+ return job;
+
+ }
+
private IImportConfigurator getConfigurator(TYPE type) {
Assert.isNotNull(type, "Type should not be null");
* <p>
* JaxbConfigurator
* </p>
- *
+ *
* @return a {@link eu.etaxonomy.cdm.io.jaxb.JaxbImportConfigurator} object.
*/
public final JaxbImportConfigurator JaxbConfigurator() {
* <p>
* TcsConfigurator
* </p>
- *
+ *
* @return a {@link eu.etaxonomy.cdm.io.tcsxml.in.TcsXmlImportConfigurator}
* object.
*/
* <p>
* EndnoteConfigurator
* </p>
- *
+ *
* @return a
* {@link eu.etaxonomy.cdm.io.reference.endnote.in.EndnoteImportConfigurator}
* object.
* <p>
* NormalExplicitConfigurator
* </p>
- *
+ *
* @return a
* {@link eu.etaxonomy.cdm.io.excel.taxa.NormalExplicitImportConfigurator}
* object.
* <p>
* SddConfigurator
* </p>
- *
+ *
* @return a {@link eu.etaxonomy.cdm.io.sdd.in.SDDImportConfigurator}
* object.
*/
* <p>
* AbcdConfigurator
* </p>
- *
+ *
* @return a
* {@link eu.etaxonomy.cdm.io.specimen.abcd206.in.Abcd206ImportConfigurator}
* object.
return (SpecimenCdmExcelImportConfigurator) getConfigurator(TYPE.SpecimenCdmExcel);
}
+
}
import java.net.URI;
import org.apache.log4j.Logger;
+import org.eclipse.core.runtime.jobs.Job;
import org.eclipse.jface.viewers.IStructuredSelection;
import org.eclipse.ui.IWorkbench;
import eu.etaxonomy.cdm.database.DbSchemaValidation;
+import eu.etaxonomy.cdm.io.common.IImportConfigurator.SOURCE_TYPE;
import eu.etaxonomy.cdm.io.specimen.abcd206.in.Abcd206ImportConfigurator;
import eu.etaxonomy.taxeditor.model.MessagingUtils;
import eu.etaxonomy.taxeditor.store.CdmStore;
/** {@inheritDoc} */
@Override
public boolean performFinish() {
- URI source = dataSourcePage.getUri();
- try {
- configurator.setSource(new FileInputStream(new File(source)));
- } catch (FileNotFoundException e) {
- MessagingUtils.errorDialog("File not found.", this, "Import file was not found.", TaxeditorStorePlugin.PLUGIN_ID, e, false);
- logger.error("File not found!", e);
- return false;
- }
- configurator.setDbSchemaValidation(DbSchemaValidation.CREATE);
+ URI source = dataSourcePage.getUri();
+ configurator.setDbSchemaValidation(DbSchemaValidation.CREATE);
- if(classificationChooserWizardPage.getClassification()!=null){
- configurator.setClassificationUuid(classificationChooserWizardPage.getClassification().getUuid());
- }
- configurator.setReportUri(classificationChooserWizardPage.getReportUri());
+ if(classificationChooserWizardPage.getClassification()!=null){
+ configurator.setClassificationUuid(classificationChooserWizardPage.getClassification().getUuid());
+ }
+ configurator.setReportUri(classificationChooserWizardPage.getReportUri());
- CdmStore.getImportManager().run(configurator);
- return true;
+ if(CdmStore.getCurrentSessionManager().isRemoting()) {
+ Job job = CdmStore.getImportManager().createIOServiceJob(configurator, new File(source), SOURCE_TYPE.INPUTSTREAM);
+ CdmStore.getImportManager().run(job);
+ } else {
+ try {
+ configurator.setSource(new FileInputStream(new File(source)));
+ } catch (FileNotFoundException e) {
+ MessagingUtils.errorDialog("File not found.", this, "Import file was not found.", TaxeditorStorePlugin.PLUGIN_ID, e, false);
+ logger.error("File not found!", e);
+ return false;
+ }
+ CdmStore.getImportManager().run(configurator);
+ }
+ return true;
}
import java.util.List;
import java.util.UUID;
+import org.eclipse.core.runtime.jobs.Job;
import org.eclipse.jface.viewers.IStructuredSelection;
import org.eclipse.swt.widgets.Combo;
import org.eclipse.ui.IWorkbench;
+import org.eclipse.ui.progress.IProgressConstants;
import eu.etaxonomy.cdm.io.csv.redlist.demo.CsvDemoExportConfigurator;
import eu.etaxonomy.cdm.model.taxon.Classification;
configurator.setLastChange(true);
}
}
- configurator.setDestination(new File(urlString));
-
- CdmStore.getExportManager().run(configurator);
-
+ if(CdmStore.getCurrentSessionManager().isRemoting()) {
+ // create job
+ Job job = CdmStore.getExportManager().createIOServiceJob(configurator, new File(urlString));
+ // configure the job
+ job.setProperty(IProgressConstants.KEEP_PROPERTY, true);
+ job.setUser(true);
+ // schedule job
+ job.schedule();
+ } else {
+
+ configurator.setDestination(new File(urlString));
+ CdmStore.getExportManager().run(configurator);
+ }
return true;
}
\r
import java.io.File;\r
\r
+import org.eclipse.core.runtime.jobs.Job;\r
import org.eclipse.jface.viewers.IStructuredSelection;\r
import org.eclipse.swt.widgets.Combo;\r
import org.eclipse.ui.IWorkbench;\r
+import org.eclipse.ui.progress.IProgressConstants;\r
\r
import eu.etaxonomy.cdm.io.csv.caryophyllales.out.CsvNameExportConfigurator;\r
import eu.etaxonomy.taxeditor.store.CdmStore;\r
*/\r
@Override\r
public boolean performFinish() {\r
- String urlString = page.getFolderText() + File.separator\r
- + page.getExportFileName();\r
-\r
- final Combo combo = page.getCombo();\r
- \r
- configurator.setDestination(new File(urlString));\r
-\r
- CdmStore.getExportManager().run(configurator);\r
-\r
+ String urlString = page.getFolderText() + File.separator\r
+ + page.getExportFileName();\r
+\r
+ final Combo combo = page.getCombo();\r
+\r
+ if(CdmStore.getCurrentSessionManager().isRemoting()) {\r
+ // create job\r
+ Job job = CdmStore.getExportManager().createIOServiceJob(configurator, new File(urlString));\r
+ // configure the job\r
+ job.setProperty(IProgressConstants.KEEP_PROPERTY, true);\r
+ job.setUser(true);\r
+ // schedule job\r
+ job.schedule();\r
+ } else {\r
+ configurator.setDestination(new File(urlString));\r
+ CdmStore.getExportManager().run(configurator);\r
+ }\r
return true;\r
}\r
\r
import java.util.List;\r
import java.util.UUID;\r
\r
+import org.eclipse.core.runtime.jobs.Job;\r
import org.eclipse.jface.viewers.IStructuredSelection;\r
import org.eclipse.swt.widgets.Combo;\r
import org.eclipse.ui.IWorkbench;\r
+import org.eclipse.ui.progress.IProgressConstants;\r
\r
import eu.etaxonomy.cdm.io.csv.caryophyllales.out.CsvNameExportConfigurator;\r
import eu.etaxonomy.cdm.model.taxon.Classification;\r
import eu.etaxonomy.taxeditor.store.CdmStore;\r
\r
public class CsvPrintExportWizard extends CsvNameExportWizard{\r
- \r
- \r
+\r
+\r
private final String description = "Export the contents of the currently selected database into Semicolon Separated Value format.";\r
@Override\r
public void init(IWorkbench workbench, IStructuredSelection selection) {\r
\r
@Override\r
public CsvNameExportConfigurator getConfigurator() {\r
- \r
+\r
return configurator;\r
}\r
\r
- \r
+\r
\r
/*\r
* (non-Javadoc)\r
set.add(c.getUuid());\r
}\r
}\r
- \r
+\r
configurator.setHasHeaderLines(true);\r
- \r
+\r
}\r
- } else{ \r
+ } else{\r
configurator.setClassificationUUID(listClassifications.get(0).getUuid());\r
}\r
- configurator.setDestination(new File(urlString));\r
-\r
- CdmStore.getExportManager().run(configurator);\r
\r
+ if(CdmStore.getCurrentSessionManager().isRemoting()) {\r
+ // create job\r
+ Job job = CdmStore.getExportManager().createIOServiceJob(configurator, new File(urlString));\r
+ // configure the job\r
+ job.setProperty(IProgressConstants.KEEP_PROPERTY, true);\r
+ job.setUser(true);\r
+ // schedule job\r
+ job.schedule();\r
+ } else {\r
+ configurator.setDestination(new File(urlString));\r
+ CdmStore.getExportManager().run(configurator);\r
+ }\r
return true;\r
}\r
\r
package eu.etaxonomy.taxeditor.io.wizard;
+import java.io.File;
import java.net.URI;
+import org.eclipse.core.runtime.jobs.Job;
import org.eclipse.jface.viewers.IStructuredSelection;
import org.eclipse.ui.IWorkbench;
import eu.etaxonomy.cdm.database.DbSchemaValidation;
+import eu.etaxonomy.cdm.io.common.IImportConfigurator.SOURCE_TYPE;
import eu.etaxonomy.cdm.io.excel.taxa.NormalExplicitImportConfigurator;
import eu.etaxonomy.taxeditor.store.CdmStore;
configurator.setSource(source);
configurator.setDbSchemaValidation(DbSchemaValidation.CREATE);
- CdmStore.getImportManager().run(configurator);
+ if(CdmStore.getCurrentSessionManager().isRemoting()) {
+ Job job = CdmStore.getImportManager().createIOServiceJob(configurator, new File(source), SOURCE_TYPE.URI);
+ CdmStore.getImportManager().run(job);
+ } else {
+ CdmStore.getImportManager().run(configurator);
+ }
+
return true;
}
import org.eclipse.swt.widgets.Text;
import eu.etaxonomy.cdm.model.taxon.Classification;
-import eu.etaxonomy.cdm.remote.CdmRemoteSourceException;
import eu.etaxonomy.taxeditor.datasource.CdmDataSourceRepository;
+import eu.etaxonomy.taxeditor.remoting.source.CdmRemoteSourceException;
import eu.etaxonomy.taxeditor.store.CdmStore;
/**
// $Id$
/**
* Copyright (C) 2007 EDIT
-* European Distributed Institute of Taxonomy
+* European Distributed Institute of Taxonomy
* http://www.e-taxonomy.eu
-*
+*
* The contents of this file are subject to the Mozilla Public License Version 1.1
* See LICENSE.TXT at the top of this package for the full license terms.
*/
import java.io.File;
import java.net.URI;
+import org.eclipse.core.runtime.jobs.Job;
import org.eclipse.jface.viewers.IStructuredSelection;
import org.eclipse.ui.IWorkbench;
+import org.eclipse.ui.progress.IProgressConstants;
import eu.etaxonomy.cdm.io.jaxb.JaxbExportConfigurator;
import eu.etaxonomy.taxeditor.store.CdmStore;
* @see org.eclipse.ui.IWorkbenchWizard#init(org.eclipse.ui.IWorkbench, org.eclipse.jface.viewers.IStructuredSelection)
*/
/** {@inheritDoc} */
- public void init(IWorkbench workbench, IStructuredSelection selection) {
+ @Override
+ public void init(IWorkbench workbench, IStructuredSelection selection) {
this.setWindowTitle("JAXB Export");
this.configurator = CdmStore.getExportManager().JaxbConfigurator();
}
-
+
/* (non-Javadoc)
* @see org.eclipse.jface.wizard.Wizard#performFinish()
*/
@Override
public boolean performFinish() {
boolean performFinish = false;
- URI urlString;
- File savePath = new File(page.getFolderText() + File.separator + page.getExportFileName());
- urlString = savePath.toURI();
- //orig: urlString = new URI(page.getFolderText() + File.separator + page.getExportFileName());
+
+ File exportFile = new File(page.getFolderText() + File.separator + page.getExportFileName());
+ URI urlString = exportFile.toURI();
configurator.setDestination(urlString);
- CdmStore.getExportManager().run(configurator);
+ if(CdmStore.getCurrentSessionManager().isRemoting()) {
+ // create job
+ Job job = CdmStore.getExportManager().createIOServiceJob(configurator, exportFile);
+ // configure the job
+ job.setProperty(IProgressConstants.KEEP_PROPERTY, true);
+ job.setUser(true);
+ // schedule job
+ job.schedule();
+ } else {
+ CdmStore.getExportManager().run(configurator);
+ }
performFinish = true;
return performFinish;
}
@Override
public void addPages() {
super.addPages();
-
+
page = ExportToFileDestinationWizardPage.Jaxb();
addPage(page);
}
public JaxbExportConfigurator getConfigurator() {
return configurator;
}
-
+
}
// $Id$
/**
* Copyright (C) 2007 EDIT
-* European Distributed Institute of Taxonomy
+* European Distributed Institute of Taxonomy
* http://www.e-taxonomy.eu
-*
+*
* The contents of this file are subject to the Mozilla Public License Version 1.1
* See LICENSE.TXT at the top of this package for the full license terms.
*/
import java.io.File;
+import org.eclipse.core.runtime.jobs.Job;
import org.eclipse.jface.viewers.IStructuredSelection;
import org.eclipse.ui.IWorkbench;
+import org.eclipse.ui.progress.IProgressConstants;
import eu.etaxonomy.cdm.io.sdd.out.SDDExportConfigurator;
import eu.etaxonomy.taxeditor.store.CdmStore;
public class SddExportWizard extends AbstractExportWizard<SDDExportConfigurator> {
private ExportToFileDestinationWizardPage page;
-
+
private SDDExportConfigurator configurator;
-
+
/* (non-Javadoc)
* @see eu.etaxonomy.taxeditor.io.wizard.AbstractExportWizard#getConfigurator()
*/
/** {@inheritDoc} */
@Override
public boolean performFinish() {
- File file = new File(page.getFolderText() + File.separator + page.getExportFileName());
-
- configurator.setDestination(file);
-
- CdmStore.getExportManager().run(configurator);
-
- return true;
+ File file = new File(page.getFolderText() + File.separator + page.getExportFileName());
+
+ if(CdmStore.getCurrentSessionManager().isRemoting()) {
+ // create job
+ Job job = CdmStore.getExportManager().createIOServiceJob(configurator, file);
+ // configure the job
+ job.setProperty(IProgressConstants.KEEP_PROPERTY, true);
+ job.setUser(true);
+ // schedule job
+ job.schedule();
+ } else {
+ configurator.setDestination(file);
+ CdmStore.getExportManager().run(configurator);
+ }
+ return true;
}
/*
@Override
public void addPages() {
super.addPages();
-
+
page = ExportToFileDestinationWizardPage.Sdd();
addPage(page);
}
-
+
/* (non-Javadoc)
* @see org.eclipse.ui.IWorkbenchWizard#init(org.eclipse.ui.IWorkbench, org.eclipse.jface.viewers.IStructuredSelection)
*/
/** {@inheritDoc} */
- public void init(IWorkbench workbench, IStructuredSelection selection) {
+ @Override
+ public void init(IWorkbench workbench, IStructuredSelection selection) {
this.setWindowTitle("SDD Export");
this.configurator = CdmStore.getExportManager().SddConfigurator();
}
// $Id$
/**
* Copyright (C) 2007 EDIT
-* European Distributed Institute of Taxonomy
+* European Distributed Institute of Taxonomy
* http://www.e-taxonomy.eu
-*
+*
* The contents of this file are subject to the Mozilla Public License Version 1.1
* See LICENSE.TXT at the top of this package for the full license terms.
*/
package eu.etaxonomy.taxeditor.io.wizard;
+import java.io.File;
import java.net.URI;
+import org.eclipse.core.runtime.jobs.Job;
import org.eclipse.jface.viewers.IStructuredSelection;
import org.eclipse.ui.IWorkbench;
import eu.etaxonomy.cdm.database.DbSchemaValidation;
+import eu.etaxonomy.cdm.io.common.IImportConfigurator.SOURCE_TYPE;
import eu.etaxonomy.cdm.io.sdd.in.SDDImportConfigurator;
import eu.etaxonomy.taxeditor.store.CdmStore;
public class SddImportWizard extends AbstractImportWizard<SDDImportConfigurator> {
private SDDImportConfigurator configurator;
-
+
private ImportFromFileDataSourceWizardPage dataSourcePage;
-
+
/* (non-Javadoc)
* @see eu.etaxonomy.taxeditor.io.wizard.AbstractImportWizard#getConfigurator()
*/
public SDDImportConfigurator getConfigurator() {
return configurator;
}
-
+
/*
* (non-Javadoc)
* @see org.eclipse.jface.wizard.Wizard#addPage(org.eclipse.jface.wizard.IWizardPage)
@Override
public void addPages() {
super.addPages();
-
- dataSourcePage = new ImportFromFileDataSourceWizardPage("Choose File",
+
+ dataSourcePage = new ImportFromFileDataSourceWizardPage("Choose File",
"Please choose an XML file in the SDD format.", new String[]{"*.xml", "*.sdd"});
addPage(dataSourcePage);
}
-
+
/* (non-Javadoc)
* @see org.eclipse.jface.wizard.Wizard#performFinish()
*/
URI source = dataSourcePage.getUri();
configurator.setSource(source);
configurator.setDbSchemaValidation(DbSchemaValidation.CREATE);
-
- CdmStore.getImportManager().run(configurator);
-
+
+ if(CdmStore.getCurrentSessionManager().isRemoting()) {
+ Job job = CdmStore.getImportManager().createIOServiceJob(configurator, new File(source), SOURCE_TYPE.URI);
+ CdmStore.getImportManager().run(job);
+ } else {
+ CdmStore.getImportManager().run(configurator);
+ }
+
return true;
}
* @see org.eclipse.ui.IWorkbenchWizard#init(org.eclipse.ui.IWorkbench, org.eclipse.jface.viewers.IStructuredSelection)
*/
/** {@inheritDoc} */
- public void init(IWorkbench workbench, IStructuredSelection selection) {
+ @Override
+ public void init(IWorkbench workbench, IStructuredSelection selection) {
super.init(workbench, selection);
configurator = CdmStore.getImportManager().SddConfigurator();
}
// $Id$
/**
* Copyright (C) 2007 EDIT
-* European Distributed Institute of Taxonomy
+* European Distributed Institute of Taxonomy
* http://www.e-taxonomy.eu
-*
+*
* The contents of this file are subject to the Mozilla Public License Version 1.1
* See LICENSE.TXT at the top of this package for the full license terms.
*/
package eu.etaxonomy.taxeditor.io.wizard;
+import java.io.File;
import java.net.URI;
+import org.eclipse.core.runtime.jobs.Job;
import org.eclipse.jface.viewers.IStructuredSelection;
import org.eclipse.ui.IWorkbench;
import eu.etaxonomy.cdm.database.DbSchemaValidation;
+import eu.etaxonomy.cdm.io.common.IImportConfigurator.SOURCE_TYPE;
import eu.etaxonomy.cdm.io.tcsxml.in.TcsXmlImportConfigurator;
import eu.etaxonomy.taxeditor.store.CdmStore;
* @created 15.06.2009
* @version 1.0
*/
-public class TcsImportWizard extends AbstractImportWizard<TcsXmlImportConfigurator>{
-
+public class TcsImportWizard extends AbstractImportWizard<TcsXmlImportConfigurator> {
+
private TcsXmlImportConfigurator configurator;
private ImportFromFileDataSourceWizardPage dataSourcePage;
/** {@inheritDoc} */
@Override
public boolean performFinish() {
- URI source = dataSourcePage.getUri();
- configurator.setSource(source);
- configurator.setDbSchemaValidation(DbSchemaValidation.CREATE);
-
- CdmStore.getImportManager().run(configurator);
-
- return true;
+ URI source = dataSourcePage.getUri();
+ configurator.setSource(source);
+ configurator.setDbSchemaValidation(DbSchemaValidation.CREATE);
+
+ if(CdmStore.getCurrentSessionManager().isRemoting()) {
+ Job job = CdmStore.getImportManager().createIOServiceJob(configurator, new File(source), SOURCE_TYPE.URI);
+ CdmStore.getImportManager().run(job);
+ } else {
+ CdmStore.getImportManager().run(configurator);
+ }
+
+ return true;
}
/* (non-Javadoc)
* @see org.eclipse.ui.IWorkbenchWizard#init(org.eclipse.ui.IWorkbench, org.eclipse.jface.viewers.IStructuredSelection)
*/
/** {@inheritDoc} */
- public void init(IWorkbench workbench, IStructuredSelection selection) {
+ @Override
+ public void init(IWorkbench workbench, IStructuredSelection selection) {
super.init(workbench, selection);
configurator = CdmStore.getImportManager().TcsConfigurator();
}
@Override
public void addPages() {
super.addPages();
-
+
dataSourcePage = ImportFromFileDataSourceWizardPage.XML();
addPage(dataSourcePage);
}
import java.util.TreeSet;
import org.eclipse.core.commands.ExecutionException;
+import org.eclipse.core.commands.NotEnabledException;
+import org.eclipse.core.commands.NotHandledException;
+import org.eclipse.core.commands.common.NotDefinedException;
+import org.eclipse.core.commands.operations.AbstractOperation;
import org.eclipse.core.commands.operations.IOperationHistory;
import org.eclipse.core.runtime.IAdaptable;
import org.eclipse.core.runtime.IProgressMonitor;
import org.eclipse.ui.IWorkbenchPart;
import org.eclipse.ui.PartInitException;
import org.eclipse.ui.PlatformUI;
+import org.eclipse.ui.handlers.IHandlerService;
import org.eclipse.ui.ide.undo.WorkspaceUndoUtil;
import org.eclipse.ui.part.EditorPart;
import org.eclipse.ui.progress.IProgressService;
import eu.etaxonomy.cdm.model.common.IEnumTerm;
import eu.etaxonomy.taxeditor.operation.AbstractPostOperation;
import eu.etaxonomy.taxeditor.operation.IPostOperationEnabled;
+import eu.etaxonomy.taxeditor.operation.RemotingCdmHandler;
import eu.etaxonomy.taxeditor.store.internal.TaxeditorStorePlugin;
import eu.etaxonomy.taxeditor.view.AbstractCdmDataViewer;
import eu.etaxonomy.taxeditor.view.detail.DetailsViewPart;
return Status.OK_STATUS;
}
+ public static IStatus executeOperation(final AbstractOperation operation, final RemotingCdmHandler handler) {
+ if (getOperationHistory() == null) {
+ throw new IllegalArgumentException(
+ "There is no operation history for this context");
+ }
+
+ final IAdaptable uiInfoAdapter = WorkspaceUndoUtil
+ .getUIInfoAdapter(getShell());
+
+ IRunnableWithProgress runnable = new IRunnableWithProgress() {
+
+ @Override
+ public void run(IProgressMonitor monitor)
+ throws InvocationTargetException, InterruptedException {
+ String operationlabel = operation.getLabel();
+ monitor.beginTask(operationlabel, 100);
+ IStatus status = Status.CANCEL_STATUS;
+ try {
+ operation.addContext(IOperationHistory.GLOBAL_UNDO_CONTEXT);
+ status = getOperationHistory().execute(operation, monitor,
+ uiInfoAdapter);
+ if(handler != null) {
+ handler.postOperation(status);
+ }
+ } catch (ExecutionException e) {
+ MessagingUtils.operationDialog(this, e, TaxeditorStorePlugin.PLUGIN_ID, operationlabel, null);
+ } finally {
+ monitor.done();
+ }
+
+ String statusString = status.equals(Status.OK_STATUS) ? "completed"
+ : "cancelled";
+ setStatusLine(operationlabel + " " + statusString + ".");
+
+ }
+ };
+
+ try {
+ runInUI(runnable, null);
+ } catch (Exception e) {
+ MessagingUtils.messageDialog("Error executing operation", AbstractUtility.class, "An error occured while executing " + operation.getLabel(), e);
+ }
+
+ return Status.OK_STATUS;
+ }
/**
* <p>
* getOperationHistory
}
+ public static void executeCommand(String commandId, Object source, String pluginId) {
+ IHandlerService handlerService = (IHandlerService) AbstractUtility.getService(IHandlerService.class);
+ Exception exception = null;
+ try {
+ handlerService.executeCommand(commandId, null);
+ } catch (ExecutionException e) {
+ exception = e;
+ } catch (NotDefinedException e) {
+ exception = e;
+ } catch (NotEnabledException e) {
+ exception = e;
+ } catch (NotHandledException e) {
+ exception = e;
+ } finally {
+ if(exception != null) {
+ MessagingUtils.errorDialog("Error executing command",
+ source,
+ "Could not execute command with id " + commandId ,
+ pluginId,
+ exception,
+ true);
+ }
+ }
+ }
}
/** {@inheritDoc} */
@Override
protected void saveEntity() {
- CdmStore.getService(IAmplificationService.class).saveOrUpdate(getEntity());
+ CdmStore.getService(IAmplificationService.class).merge(getEntity());
}
/** {@inheritDoc} */
// $Id$
/**
* Copyright (C) 2007 EDIT
-* European Distributed Institute of Taxonomy
+* European Distributed Institute of Taxonomy
* http://www.e-taxonomy.eu
-*
+*
* The contents of this file are subject to the Mozilla Public License Version 1.1
* See LICENSE.TXT at the top of this package for the full license terms.
*/
package eu.etaxonomy.taxeditor.newWizard;
+import eu.etaxonomy.cdm.api.application.CdmApplicationState;
+import eu.etaxonomy.cdm.api.application.CdmChangeEvent;
+import eu.etaxonomy.cdm.api.application.CdmChangeEvent.Action;
import eu.etaxonomy.cdm.api.service.IClassificationService;
import eu.etaxonomy.cdm.model.taxon.Classification;
import eu.etaxonomy.taxeditor.store.CdmStore;
entity = CdmStore.getService(IClassificationService.class).load(entity.getUuid());
super.setEntity(entity);
}
-
+
@Override
public void addPages() {
classificationWizardPage = new ClassificationWizardPage(formFactory, getConversationHolder(), getEntity());
addPage(classificationWizardPage);
}
-
+
@Override
protected void saveEntity() {
- CdmStore.getService(IClassificationService.class).saveOrUpdate(getEntity());
+ //CdmStore.getService(IClassificationService.class).saveOrUpdate(getEntity());
+ Classification classification = getEntity();
+ CdmStore.getService(IClassificationService.class).merge(getEntity());
+
+ CdmApplicationState.getCurrentDataChangeService()
+ .fireChangeEvent(new CdmChangeEvent(Action.Create, classification, NewTaxonNodeWizard.class), true);
+
}
@Override
// $Id$
/**
* Copyright (C) 2007 EDIT
-* European Distributed Institute of Taxonomy
+* European Distributed Institute of Taxonomy
* http://www.e-taxonomy.eu
-*
+*
* The contents of this file are subject to the Mozilla Public License Version 1.1
* See LICENSE.TXT at the top of this package for the full license terms.
*/
public void addPages() {
addPage(new CollectionWizardPage(formFactory, getConversationHolder(), getEntity()));
}
-
+
/* (non-Javadoc)
* @see eu.etaxonomy.taxeditor.editor.newWizard.AbstractNewEntityWizard#saveEntity()
*/
/** {@inheritDoc} */
@Override
protected void saveEntity() {
- CdmStore.getService(ICollectionService.class).saveOrUpdate(getEntity());
+ CdmStore.getService(ICollectionService.class).merge(getEntity());
}
/* (non-Javadoc)
protected String getEntityName() {
return "Collection";
}
-
+
}
// $Id$
/**
-* Copyright (C) 2007 EDIT
-* European Distributed Institute of Taxonomy
-* http://www.e-taxonomy.eu
-*
-* The contents of this file are subject to the Mozilla Public License Version 1.1
-* See LICENSE.TXT at the top of this package for the full license terms.
-*/
+ * Copyright (C) 2007 EDIT
+ * European Distributed Institute of Taxonomy
+ * http://www.e-taxonomy.eu
+ *
+ * The contents of this file are subject to the Mozilla Public License Version 1.1
+ * See LICENSE.TXT at the top of this package for the full license terms.
+ */
package eu.etaxonomy.taxeditor.newWizard;
+import java.util.HashMap;
+import java.util.Map;
+import java.util.UUID;
+
+import org.eclipse.core.commands.Command;
+import org.eclipse.core.commands.ExecutionException;
+import org.eclipse.core.commands.NotEnabledException;
+import org.eclipse.core.commands.NotHandledException;
+import org.eclipse.core.commands.ParameterizedCommand;
+import org.eclipse.core.commands.common.NotDefinedException;
+import org.eclipse.jface.dialogs.IDialogConstants;
+import org.eclipse.jface.dialogs.MessageDialogWithToggle;
+import org.eclipse.ui.IWorkbenchWindow;
+import org.eclipse.ui.PlatformUI;
+import org.eclipse.ui.commands.ICommandService;
+import org.eclipse.ui.handlers.IHandlerService;
+
import eu.etaxonomy.cdm.api.facade.DerivedUnitFacade;
import eu.etaxonomy.cdm.api.facade.DerivedUnitFacadeNotSupportedException;
import eu.etaxonomy.cdm.api.service.IOccurrenceService;
import eu.etaxonomy.cdm.model.occurrence.MediaSpecimen;
import eu.etaxonomy.cdm.model.occurrence.SpecimenOrObservationBase;
import eu.etaxonomy.cdm.model.occurrence.SpecimenOrObservationType;
+import eu.etaxonomy.taxeditor.model.AbstractUtility;
import eu.etaxonomy.taxeditor.model.IDerivedUnitFacadePart;
+import eu.etaxonomy.taxeditor.model.MessagingUtils;
+import eu.etaxonomy.taxeditor.preference.IPreferenceKeys;
import eu.etaxonomy.taxeditor.preference.PreferencesUtil;
import eu.etaxonomy.taxeditor.store.CdmStore;
import eu.etaxonomy.taxeditor.ui.section.occurrence.DerivedUnitBaseWizardPage;
import eu.etaxonomy.taxeditor.ui.section.occurrence.FieldUnitGeneralWizardPage;
import eu.etaxonomy.taxeditor.ui.section.occurrence.FieldUnitWizardPage;
import eu.etaxonomy.taxeditor.ui.section.occurrence.GatheringEventWizardPage;
+import eu.etaxonomy.taxeditor.view.derivateSearch.DerivateSearchCompositeController;
/**
- * <p>NewDerivedUnitBaseWizard class.</p>
- *
* @author n.hoffmann
* @created Jun 16, 2010
* @version 1.0
*/
public class NewDerivedUnitBaseWizard extends AbstractNewEntityWizard<SpecimenOrObservationBase> implements IDerivedUnitFacadePart{
- private SpecimenOrObservationType specOrObsType = null;
+ private SpecimenOrObservationType specOrObsType = null;
- public NewDerivedUnitBaseWizard() {
- super();
- }
+ public NewDerivedUnitBaseWizard() {
+ super();
+ }
- public NewDerivedUnitBaseWizard(SpecimenOrObservationType specOrObsType) {
- super();
- this.specOrObsType = specOrObsType;
- }
- /** {@inheritDoc} */
- @Override
- public void addPages() {
- DerivedUnitFacade facade = null;
- try {
- if(getEntity() instanceof DerivedUnit) {
- facade = DerivedUnitFacade.NewInstance((DerivedUnit)getEntity(), PreferencesUtil.getDerivedUnitConfigurator());
- addPage(new DerivedUnitGeneralWizardPage(formFactory, getConversationHolder(), facade));
- addPage(new GatheringEventWizardPage(formFactory, getConversationHolder(), facade));
- addPage(new FieldUnitWizardPage(formFactory, getConversationHolder(), facade));
- addPage(new DerivedUnitBaseWizardPage(formFactory, getConversationHolder(), facade));
- }
- else if(getEntity() instanceof FieldUnit){
- facade = DerivedUnitFacade.NewInstance(SpecimenOrObservationType.FieldUnit, (FieldUnit)getEntity(), PreferencesUtil.getDerivedUnitConfigurator());
- addPage(new FieldUnitGeneralWizardPage(formFactory, getConversationHolder(), facade));
- addPage(new GatheringEventWizardPage(formFactory, getConversationHolder(), facade));
- addPage(new FieldUnitWizardPage(formFactory, getConversationHolder(), facade));
- }
- } catch (DerivedUnitFacadeNotSupportedException e) {
- // we should never get here
- throw new IllegalStateException();
- }
- }
+ public NewDerivedUnitBaseWizard(SpecimenOrObservationType specOrObsType) {
+ super();
+ this.specOrObsType = specOrObsType;
+ }
+ /** {@inheritDoc} */
+ @Override
+ public void addPages() {
+ DerivedUnitFacade facade = null;
+ try {
+ if(getEntity() instanceof DerivedUnit) {
+ facade = DerivedUnitFacade.NewInstance((DerivedUnit)getEntity(), PreferencesUtil.getDerivedUnitConfigurator());
+ addPage(new DerivedUnitGeneralWizardPage(formFactory, getConversationHolder(), facade));
+ addPage(new GatheringEventWizardPage(formFactory, getConversationHolder(), facade));
+ addPage(new FieldUnitWizardPage(formFactory, getConversationHolder(), facade));
+ addPage(new DerivedUnitBaseWizardPage(formFactory, getConversationHolder(), facade));
+ }
+ else if(getEntity() instanceof FieldUnit){
+ facade = DerivedUnitFacade.NewInstance(SpecimenOrObservationType.FieldUnit, (FieldUnit)getEntity(), PreferencesUtil.getDerivedUnitConfigurator());
+ addPage(new FieldUnitGeneralWizardPage(formFactory, getConversationHolder(), facade));
+ addPage(new GatheringEventWizardPage(formFactory, getConversationHolder(), facade));
+ addPage(new FieldUnitWizardPage(formFactory, getConversationHolder(), facade));
+ }
+ } catch (DerivedUnitFacadeNotSupportedException e) {
+ // we should never get here
+ throw new IllegalStateException();
+ }
+ }
- /*
- * (non-Javadoc)
- *
- * @see eu.etaxonomy.taxeditor.editor.newWizard.AbstractNewEntityWizard#
- * createNewEntity()
- */
/** {@inheritDoc} */
@Override
protected SpecimenOrObservationBase createNewEntity() {
} else {
if (SpecimenOrObservationType.Media.equals(specOrObsType)
|| ((specOrObsType.getKindOf() != null) && specOrObsType.getKindOf().equals(SpecimenOrObservationType.Media))) {
- MediaSpecimen mediaSpecimen = MediaSpecimen.NewInstance(specOrObsType);
- //a MediaSpecimen with no media attached does not make sense. Hence, we add one
+ MediaSpecimen mediaSpecimen = MediaSpecimen.NewInstance(specOrObsType);
+ //a MediaSpecimen with no media attached does not make sense. Hence, we add one
mediaSpecimen.setMediaSpecimen(Media.NewInstance());
return mediaSpecimen;
} else if (specOrObsType.equals(SpecimenOrObservationType.FieldUnit)) {
}
}
- /* (non-Javadoc)
- * @see eu.etaxonomy.taxeditor.editor.newWizard.AbstractNewEntityWizard#saveEntity()
- */
+
/** {@inheritDoc} */
@Override
protected void saveEntity() {
- CdmStore.getService(IOccurrenceService.class).saveOrUpdate(getEntity());
+ CdmStore.getService(IOccurrenceService.class).merge(getEntity());
}
- @Override
- protected String getEntityName() {
- return "Specimen";
- }
+
+ @Override
+ protected String getEntityName() {
+ return "Specimen";
+ }
+
+ /**
+ * {@inheritDoc}
+ */
+ @Override
+ public boolean performFinish() {
+ boolean performFinish = super.performFinish();
+ int returnCode = IDialogConstants.NO_ID;
+ if (!PreferencesUtil.getPreferenceStore().getBoolean(IPreferenceKeys.PROMPT_FOR_OPEN_SPECIMEN_IN_EDITOR)){
+ MessageDialogWithToggle messageDialog = MessageDialogWithToggle.openYesNoQuestion(getShell(),
+ "Choose opening option", "Do you want to open the specimen in the specimen editor?",
+ "Remember my decision?", false, PreferencesUtil.getPreferenceStore(),
+ IPreferenceKeys.ALWAYS_OPEN_SPECIMEN_IN_EDITOR);
+ returnCode = messageDialog.getReturnCode();
+ PreferencesUtil.getPreferenceStore().setValue(IPreferenceKeys.PROMPT_FOR_OPEN_SPECIMEN_IN_EDITOR, messageDialog.getToggleState());
+ if (returnCode != IDialogConstants.YES_ID) {
+ return performFinish;
+ }
+ }
+ if (returnCode==IDialogConstants.YES_ID ||
+ PreferencesUtil.getPreferenceStore().getString(IPreferenceKeys.ALWAYS_OPEN_SPECIMEN_IN_EDITOR)
+ .equals(MessageDialogWithToggle.ALWAYS)) {
+ IHandlerService handlerService = (IHandlerService) AbstractUtility.getService(IHandlerService.class);
+
+ // get the command from plugin.xml
+ IWorkbenchWindow window = PlatformUI.getWorkbench().getActiveWorkbenchWindow();
+ ICommandService cmdService = (ICommandService) window.getService(ICommandService.class);
+ Command command = cmdService.getCommand("eu.etaxonomy.taxeditor.editor.openSpecimenEditor");
+ Map<String, UUID> parameters = new HashMap<String, UUID>();
+ parameters.put("eu.etaxonomy.taxeditor.specimenUuidParameter", getEntity().getUuid());
+ ParameterizedCommand parameterizedCommand = ParameterizedCommand.generateCommand(command, parameters);
+
+
+ // execute the command
+ try {
+ handlerService.executeCommand(parameterizedCommand, null);
+ } catch (ExecutionException e) {
+ MessagingUtils.error(DerivateSearchCompositeController.class, e);
+ } catch (NotDefinedException e) {
+ MessagingUtils.error(DerivateSearchCompositeController.class, e);
+ } catch (NotEnabledException e) {
+ MessagingUtils.error(DerivateSearchCompositeController.class, e);
+ } catch (NotHandledException e) {
+ MessagingUtils.error(DerivateSearchCompositeController.class, e);
+ }
+ }
+ return performFinish;
+ }
}
// $Id$
/**
* Copyright (C) 2007 EDIT
-* European Distributed Institute of Taxonomy
+* European Distributed Institute of Taxonomy
* http://www.e-taxonomy.eu
-*
+*
* The contents of this file are subject to the Mozilla Public License Version 1.1
* See LICENSE.TXT at the top of this package for the full license terms.
*/
/** {@inheritDoc} */
@Override
protected void saveEntity() {
- CdmStore.getService(IOccurrenceService.class).saveOrUpdate(getEntity());
+ CdmStore.getService(IOccurrenceService.class).merge(getEntity());
}
@Override
// $Id$
/**
* Copyright (C) 2007 EDIT
-* European Distributed Institute of Taxonomy
+* European Distributed Institute of Taxonomy
* http://www.e-taxonomy.eu
-*
+*
* The contents of this file are subject to the Mozilla Public License Version 1.1
* See LICENSE.TXT at the top of this package for the full license terms.
*/
* @created Sept 13 2012
*/
public class NewGrantedAuthorityWizard extends AbstractNewEntityWizard<GrantedAuthorityImpl> {
-
+
private GrantedAuthorityDetailWizardPage authorityPage;
-
+
/* (non-Javadoc)
* @see org.eclipse.jface.wizard.Wizard#addPages()
*/
*/
@Override
protected void saveEntity() {
- CdmStore.getService(IGrantedAuthorityService.class).saveOrUpdate(getEntity());
+ CdmStore.getService(IGrantedAuthorityService.class).merge(getEntity());
}
/* (non-Javadoc)
// $Id$
/**
* Copyright (C) 2007 EDIT
-* European Distributed Institute of Taxonomy
+* European Distributed Institute of Taxonomy
* http://www.e-taxonomy.eu
-*
+*
* The contents of this file are subject to the Mozilla Public License Version 1.1
* See LICENSE.TXT at the top of this package for the full license terms.
*/
public class NewGroupWizard extends AbstractNewEntityWizard<Group> {
private GroupDetailWizardPage groupPage;
-
+
/* (non-Javadoc)
* @see org.eclipse.jface.wizard.Wizard#addPages()
*/
groupPage = new GroupDetailWizardPage(formFactory, getConversationHolder(), getEntity());
super.addPage(groupPage);
}
-
+
/* (non-Javadoc)
* @see eu.etaxonomy.taxeditor.newWizard.AbstractNewEntityWizard#saveEntity()
*/
@Override
protected void saveEntity() {
- CdmStore.getService(IGroupService.class).saveOrUpdate(getEntity());
+ CdmStore.getService(IGroupService.class).merge(getEntity());
}
/* (non-Javadoc)
// $Id$
/**
* Copyright (C) 2007 EDIT
-* European Distributed Institute of Taxonomy
+* European Distributed Institute of Taxonomy
* http://www.e-taxonomy.eu
-*
+*
* The contents of this file are subject to the Mozilla Public License Version 1.1
* See LICENSE.TXT at the top of this package for the full license terms.
*/
public void addPages() {
addPage(new InstitutionWizardPage(formFactory, getConversationHolder(), getEntity()));
}
-
+
/* (non-Javadoc)
* @see eu.etaxonomy.taxeditor.editor.newWizard.AbstractNewEntityWizard#saveEntity()
*/
@Override
protected void saveEntity() {
- CdmStore.getService(IAgentService.class).saveOrUpdate(getEntity());
+ CdmStore.getService(IAgentService.class).merge(getEntity());
}
/* (non-Javadoc)
// $Id$
/**
* Copyright (C) 2007 EDIT
-* European Distributed Institute of Taxonomy
+* European Distributed Institute of Taxonomy
* http://www.e-taxonomy.eu
-*
+*
* The contents of this file are subject to the Mozilla Public License Version 1.1
* See LICENSE.TXT at the top of this package for the full license terms.
*/
public void addPages() {
addPage(new NonViralNameWizardPage(formFactory, getConversationHolder(), getEntity()));
}
-
+
/** {@inheritDoc} */
@Override
protected NonViralName createNewEntity() {
/** {@inheritDoc} */
@Override
protected void saveEntity() {
- CdmStore.getService(INameService.class).saveOrUpdate(getEntity());
+ CdmStore.getService(INameService.class).merge(getEntity());
}
@Override
// $Id$
/**
* Copyright (C) 2007 EDIT
-* European Distributed Institute of Taxonomy
+* European Distributed Institute of Taxonomy
* http://www.e-taxonomy.eu
-*
+*
* The contents of this file are subject to the Mozilla Public License Version 1.1
* See LICENSE.TXT at the top of this package for the full license terms.
*/
public void addPages() {
addPage(new PersonWizardPage(formFactory, getConversationHolder(), getEntity()));
}
-
+
/** {@inheritDoc} */
@Override
protected Person createNewEntity() {
/** {@inheritDoc} */
@Override
protected void saveEntity() {
- CdmStore.getService(IAgentService.class).saveOrUpdate(getEntity());
+ CdmStore.getService(IAgentService.class).merge(getEntity());
}
@Override
/**
- *
+ *
*/
package eu.etaxonomy.taxeditor.newWizard;
public class NewPolytomousKeyWizard extends AbstractNewEntityWizard<PolytomousKey> {
private PolytomousKeyWizardPage polytomousKeyPage;
-
+
@Override
public void addPages() {
polytomousKeyPage = new PolytomousKeyWizardPage(formFactory, getConversationHolder(), getEntity());
super.addPage(polytomousKeyPage);
}
-
+
public String getPolytomousKeyName() {
return polytomousKeyPage.getPolytomousKeyName();
}
-
+
/* (non-Javadoc)
* @see eu.etaxonomy.taxeditor.editor.newWizard.AbstractNewEntityWizard#saveEntity()
*/
@Override
protected void saveEntity() {
if(!polytomousKeyPage.getPolytomousKeyName().equals("")) {
- CdmStore.getService(IPolytomousKeyService.class).saveOrUpdate(getEntity());
+ CdmStore.getService(IPolytomousKeyService.class).merge(getEntity());
}
}
/** {@inheritDoc} */
@Override
protected void saveEntity() {
- CdmStore.getService(IPrimerService.class).saveOrUpdate(getEntity());
+ CdmStore.getService(IPrimerService.class).merge(getEntity());
}
/** {@inheritDoc} */
// $Id$
/**
* Copyright (C) 2007 EDIT
-* European Distributed Institute of Taxonomy
+* European Distributed Institute of Taxonomy
* http://www.e-taxonomy.eu
-*
+*
* The contents of this file are subject to the Mozilla Public License Version 1.1
* See LICENSE.TXT at the top of this package for the full license terms.
*/
* @version 1.0
*/
public class NewReferenceWizard extends AbstractNewEntityWizard<Reference> {
-
+
private ReferenceWizardPage referencePage;
-
+
/** {@inheritDoc} */
@Override
public void addPages() {
/** {@inheritDoc} */
@Override
protected void saveEntity() {
- CdmStore.getService(IReferenceService.class).saveOrUpdate(getEntity());
+ CdmStore.getService(IReferenceService.class).save(getEntity());
}
/** {@inheritDoc} */
*/
package eu.etaxonomy.taxeditor.newWizard;
+import java.util.HashSet;
+import java.util.Set;
import java.util.UUID;
import org.apache.commons.lang.StringUtils;
+import eu.etaxonomy.cdm.api.application.CdmApplicationState;
+import eu.etaxonomy.cdm.api.application.CdmChangeEvent;
+import eu.etaxonomy.cdm.api.application.CdmChangeEvent.Action;
import eu.etaxonomy.cdm.api.service.IClassificationService;
import eu.etaxonomy.cdm.api.service.ITaxonNodeService;
+import eu.etaxonomy.cdm.model.common.CdmBase;
import eu.etaxonomy.cdm.model.taxon.Classification;
import eu.etaxonomy.cdm.model.taxon.ITaxonTreeNode;
import eu.etaxonomy.cdm.model.taxon.Taxon;
*/
public class NewTaxonNodeWizard extends AbstractNewEntityWizard<ITaxonTreeNode>{
- private TaxonNodeWizardPage taxonNodePage;
- private boolean openEmptyEditor;
- private UUID generatedTaxonNodeUuid;
+ private TaxonNodeWizardPage taxonNodePage;
+ private boolean openEmptyEditor;
+ private UUID generatedTaxonNodeUuid;
private IWizardPageListener wizardPageListener;
- @Override
- public void addPages() {
- taxonNodePage = new TaxonNodeWizardPage(formFactory, getConversationHolder(), getEntity(), wizardPageListener);
- addPage(taxonNodePage);
- }
-
- @Override
- protected void saveEntity() {
- if(taxonNodePage.getTaxon() == null || StringUtils.isEmpty(taxonNodePage.getTaxon().getName().getFullTitleCache())){
- openEmptyEditor = true;
- }else{
- getConversationHolder().bind();
- ITaxonTreeNode parent = getParentTreeNode();
- Taxon taxon = taxonNodePage.getTaxon();
- try{
- TaxonNode taxonNode = parent.addChildTaxon(taxon, parent.getReference(), parent.getMicroReference());
- generatedTaxonNodeUuid = CdmStore.getService(ITaxonNodeService.class).saveOrUpdate(taxonNode);
- }catch(IllegalArgumentException e){
- MessagingUtils.warningDialog("Taxon already exists in classfication", getClass(), e.getMessage());
- }
- }
- }
-
- @Override
- protected ITaxonTreeNode createNewEntity() {
- if(getSelection() != null){
- Object selectedObject = getSelection().getFirstElement();
- if(selectedObject instanceof ITaxonTreeNode){
- ITaxonTreeNode treeNode = (ITaxonTreeNode) selectedObject;
-
- if(treeNode instanceof Classification){
- return CdmStore.getService(IClassificationService.class).load(treeNode.getUuid());
- }
- else if(treeNode instanceof TaxonNode){
- return CdmStore.getService(ITaxonNodeService.class).load(treeNode.getUuid());
- }
- }
- }
-
- return null;
- }
-
- /**
- * <p>openInEditor</p>
- *
- * @return a boolean.
- */
- public boolean openInEditor(){
- return taxonNodePage.openInEditor();
- }
-
- /**
- * <p>openEmpty</p>
- *
- * @return a boolean.
- */
- public boolean openEmpty(){
- return openInEditor() && openEmptyEditor;
- }
-
- /**
- * <p>getTaxonNode</p>
- *
- * @return a {@link eu.etaxonomy.cdm.model.taxon.TaxonNode} object.
- */
- public TaxonNode getTaxonNode(){
- if(generatedTaxonNodeUuid != null){
- return CdmStore.getService(ITaxonNodeService.class).load(generatedTaxonNodeUuid);
- }
- return null;
- }
-
- public ITaxonTreeNode getParentTreeNode(){
- return taxonNodePage.getParentTreeNode();
- }
-
- @Override
- protected String getEntityName() {
- return "Taxon";
- }
-
- public void addWizardPageListener(IWizardPageListener wizardPageListener){
- this.wizardPageListener = wizardPageListener;
- }
+ @Override
+ public void addPages() {
+ taxonNodePage = new TaxonNodeWizardPage(formFactory, getConversationHolder(), getEntity(), wizardPageListener);
+ addPage(taxonNodePage);
+ }
+
+ @Override
+ protected void saveEntity() {
+ if(taxonNodePage.getTaxon() == null || StringUtils.isEmpty(taxonNodePage.getTaxon().getName().getFullTitleCache())){
+ openEmptyEditor = true;
+ }else{
+ getConversationHolder().bind();
+ ITaxonTreeNode parent = getParentTreeNode();
+ Taxon taxon = taxonNodePage.getTaxon();
+ try{
+ TaxonNode taxonNode = parent.addChildTaxon(taxon, parent.getReference(), parent.getMicroReference());
+ taxonNode = CdmStore.getService(ITaxonNodeService.class).merge(taxonNode);
+ generatedTaxonNodeUuid = taxonNode.getUuid();
+ Set<CdmBase> affectedObjects = new HashSet<CdmBase>();
+ //FIXME:Remoting Hack for now - need to generalise this
+ // by making the affected objects a set of ICdmBase
+ // Also, this needs to be moved to the new operations
+ // architecture.
+
+ TaxonNode parentNode = taxonNode.getParent();
+ if(parentNode.getParent() == null) {
+ affectedObjects.add(taxonNode.getClassification());
+ }
+
+ if(parentNode instanceof TaxonNode) {
+ affectedObjects.add(parentNode);
+ }
+
+ CdmApplicationState.getCurrentDataChangeService()
+ .fireChangeEvent(new CdmChangeEvent(Action.Create, affectedObjects, NewTaxonNodeWizard.class), true);
+
+ }catch(IllegalArgumentException e){
+ MessagingUtils.warningDialog("Taxon already exists in classfication", getClass(), e.getMessage());
+ }
+ }
+ }
+
+ @Override
+ protected ITaxonTreeNode createNewEntity() {
+ if(getSelection() != null){
+ Object selectedObject = getSelection().getFirstElement();
+ if(selectedObject instanceof ITaxonTreeNode){
+ ITaxonTreeNode treeNode = (ITaxonTreeNode) selectedObject;
+
+ if(treeNode instanceof Classification){
+ return CdmStore.getService(IClassificationService.class).load(treeNode.getUuid());
+ }
+ else if(treeNode instanceof TaxonNode){
+ return CdmStore.getService(ITaxonNodeService.class).load(treeNode.getUuid());
+ }
+ }
+ }
+
+ return null;
+ }
+
+ /**
+ * <p>openInEditor</p>
+ *
+ * @return a boolean.
+ */
+ public boolean openInEditor(){
+ return taxonNodePage.openInEditor();
+ }
+
+ /**
+ * <p>openEmpty</p>
+ *
+ * @return a boolean.
+ */
+ public boolean openEmpty(){
+ return openInEditor() && openEmptyEditor;
+ }
+
+ /**
+ * <p>getTaxonNode</p>
+ *
+ * @return a {@link eu.etaxonomy.cdm.model.taxon.TaxonNode} object.
+ */
+ public TaxonNode getTaxonNode(){
+ if(generatedTaxonNodeUuid != null){
+ return CdmStore.getService(ITaxonNodeService.class).load(generatedTaxonNodeUuid);
+ }
+ return null;
+ }
+
+ public ITaxonTreeNode getParentTreeNode(){
+ return taxonNodePage.getParentTreeNode();
+ }
+
+ @Override
+ protected String getEntityName() {
+ return "Taxon";
+ }
+
+ public void addWizardPageListener(IWizardPageListener wizardPageListener){
+ this.wizardPageListener = wizardPageListener;
+ }
}
\ No newline at end of file
// $Id$
/**
* Copyright (C) 2007 EDIT
-* European Distributed Institute of Taxonomy
+* European Distributed Institute of Taxonomy
* http://www.e-taxonomy.eu
-*
+*
* The contents of this file are subject to the Mozilla Public License Version 1.1
* See LICENSE.TXT at the top of this package for the full license terms.
*/
public void addPages() {
addPage(new TeamWizardPage(formFactory, getConversationHolder(), getEntity()));
}
-
+
/* (non-Javadoc)
* @see eu.etaxonomy.taxeditor.editor.newWizard.AbstractNewEntityWizard#createNewEntity()
*/
/** {@inheritDoc} */
@Override
protected void saveEntity() {
- CdmStore.getService(IAgentService.class).saveOrUpdate(getEntity());
+ CdmStore.getService(IAgentService.class).merge(getEntity());
}
@Override
/**
- *
+ *
*/
package eu.etaxonomy.taxeditor.newWizard;
public class NewUserWizard extends AbstractNewEntityWizard<User> {
private UserDetailWizardPage userPage;
-
+
@Override
public void addPages() {
userPage = new UserDetailWizardPage(formFactory, getConversationHolder(), getEntity());
addPage(userPage);
}
-
+
@Override
protected void saveEntity() {
- CdmStore.getService(IUserService.class).saveOrUpdate(getEntity());
+ CdmStore.getService(IUserService.class).merge(getEntity());
}
@Override
import eu.etaxonomy.cdm.model.common.CdmBase;
import eu.etaxonomy.cdm.model.taxon.ITaxonTreeNode;
import eu.etaxonomy.cdm.model.taxon.TaxonNode;
+import eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled;
/**
* Superclass for all operation that have to be committed imediately after execution.
* @version 1.0
*/
public abstract class AbstractPersistentPostOperation extends AbstractPostTaxonOperation {
- private IConversationEnabled conversationEnabled;
+ private final IConversationEnabled conversationEnabled;
protected ITaxonTreeNode parentNode;
+ /**
+ * <p>Constructor for AbstractPersistentPostOperation.</p>
+ *
+ * @param label a {@link java.lang.String} object.
+ * @param undoContext a {@link org.eclipse.core.commands.operations.IUndoContext} object.
+ * @param postOperationEnabled a {@link eu.etaxonomy.taxeditor.operation.IPostOperationEnabled} object.
+ * @param conversationEnabled a {@link eu.etaxonomy.cdm.api.conversation.IConversationEnabled} object.
+ */
+ protected AbstractPersistentPostOperation(String label, IUndoContext undoContext,
+ IPostOperationEnabled postOperationEnabled,
+ IConversationEnabled conversationEnabled) {
+ this(label, undoContext, postOperationEnabled, conversationEnabled, null);
+ }
+
/**
* <p>Constructor for AbstractPersistentPostOperation.</p>
*
*/
protected AbstractPersistentPostOperation(String label, IUndoContext undoContext,
IPostOperationEnabled postOperationEnabled,
- IConversationEnabled conversationEnabled) {
- super(label, undoContext, postOperationEnabled);
+ IConversationEnabled conversationEnabled,
+ ICdmEntitySessionEnabled cdmEntitySessionEnabled) {
+ super(label, undoContext, postOperationEnabled, cdmEntitySessionEnabled);
this.conversationEnabled = conversationEnabled;
}
public AbstractPersistentPostOperation(String label,
IUndoContext undoContext, TaxonNode taxonNode,
IPostOperationEnabled postOperationEnabled,
- IConversationEnabled conversationEnabled) {
- super(label, undoContext, taxonNode, postOperationEnabled);
+ IConversationEnabled conversationEnabled,
+ ICdmEntitySessionEnabled cdmEntitySessionEnabled) {
+ super(label, undoContext, taxonNode, postOperationEnabled, cdmEntitySessionEnabled);
this.conversationEnabled = conversationEnabled;
+
}
/**
public AbstractPersistentPostOperation(String label,
IUndoContext undoContext, ITaxonTreeNode parentNode,
IPostOperationEnabled postOperationEnabled,
- IConversationEnabled conversationEnabled) {
- super(label, undoContext, postOperationEnabled);
+ IConversationEnabled conversationEnabled,
+ ICdmEntitySessionEnabled cdmEntitySessionEnabled) {
+ super(label, undoContext, postOperationEnabled, cdmEntitySessionEnabled);
this.parentNode = parentNode;
this.conversationEnabled = conversationEnabled;
+
}
/* (non-Javadoc)
protected IStatus postExecute(CdmBase objectAffectedByOperation) {
Assert.isNotNull(conversationEnabled, "Operation has to have a valid conversation attached.");
-
+
if (!conversationEnabled.getConversationHolder().isClosed()){
conversationEnabled.getConversationHolder().bind();
conversationEnabled.getConversationHolder().commit(true);
*/
public void bind(){
conversationEnabled.getConversationHolder().bind();
+ if(getCdmEntitySessionEnabled() != null) {
+ getCdmEntitySessionEnabled().getCdmEntitySession().bind();
+ }
}
}
import eu.etaxonomy.cdm.model.common.CdmBase;
import eu.etaxonomy.cdm.model.common.ICdmBase;
+import eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled;
/**
* @author pplitzner
*/
protected IPostOperationEnabled postOperationEnabled;
+ private ICdmEntitySessionEnabled cdmEntitySessionEnabled;
+
/**
* <p>Constructor for AbstractPostOperation.</p>
this.postOperationEnabled = postOperationEnabled;
}
+ public AbstractPostOperation(String label, IUndoContext undoContext,
+ T element, IPostOperationEnabled postOperationEnabled,
+ ICdmEntitySessionEnabled cdmEntitySessionEnabled) {
+ this(label, undoContext);
+ this.element = element;
+ this.postOperationEnabled = postOperationEnabled;
+ this.cdmEntitySessionEnabled = cdmEntitySessionEnabled;
+ }
+
/**
* This method will try to call the post operation on a possibly registered
* IPostOperationEnabled implementor. Objects that were affected by the operation
* @return a {@link org.eclipse.core.runtime.IStatus} object.
*/
protected IStatus postExecute(CdmBase objectAffectedByOperation) {
- if(postOperationEnabled != null){
- return postOperationEnabled.postOperation(objectAffectedByOperation) ? Status.OK_STATUS : Status.CANCEL_STATUS;
- }
- return Status.OK_STATUS;
+
+ if(postOperationEnabled != null){
+ return postOperationEnabled.postOperation(objectAffectedByOperation) ? Status.OK_STATUS : Status.CANCEL_STATUS;
+ }
+ return Status.OK_STATUS;
}
/**
* @return a {@link eu.etaxonomy.taxeditor.operation.IPostOperationEnabled} object.
*/
public IPostOperationEnabled getPostOperationEnabled() {
- return postOperationEnabled;
+ return postOperationEnabled;
+ }
+
+// protected IStatus updateSession(CdmBase clientObjectAffectedByOperation, UpdateResult updateResult) {
+// Set<CdmBase> affectedObjects;
+// if(updateResult == null) {
+// affectedObjects = new HashSet<CdmBase>();
+// } else {
+// affectedObjects = updateResult.getUpdatedObjects();
+// }
+//
+// if(cdmEntitySessionEnabled != null) {
+// cdmEntitySessionEnabled.getCdmEntitySession().update(clientObjectAffectedByOperation, affectedObjects);
+// }
+// return Status.OK_STATUS;
+// }
+//
+// protected IStatus updateSession(UUID uuid) {
+//
+// if(cdmEntitySessionEnabled != null) {
+// CdmBase cdmBase = cdmEntitySessionEnabled.getCdmEntitySession().remoteLoad(CdmStore.getService(IService.class),uuid);
+// cdmEntitySessionEnabled.getCdmEntitySession().update(null, cdmBase);
+// }
+// return Status.OK_STATUS;
+// }
+
+ public ICdmEntitySessionEnabled getCdmEntitySessionEnabled() {
+ return cdmEntitySessionEnabled;
}
}
\ No newline at end of file
/**
-* Copyright (C) 2007 EDIT
-* European Distributed Institute of Taxonomy
-* http://www.e-taxonomy.eu
-*
-* The contents of this file are subject to the Mozilla Public License Version 1.1
-* See LICENSE.TXT at the top of this package for the full license terms.
-*/
+ * Copyright (C) 2007 EDIT
+ * European Distributed Institute of Taxonomy
+ * http://www.e-taxonomy.eu
+ *
+ * The contents of this file are subject to the Mozilla Public License Version 1.1
+ * See LICENSE.TXT at the top of this package for the full license terms.
+ */
package eu.etaxonomy.taxeditor.operation;
import eu.etaxonomy.cdm.model.taxon.ITaxonTreeNode;
import eu.etaxonomy.cdm.model.taxon.Taxon;
import eu.etaxonomy.cdm.model.taxon.TaxonNode;
+import eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled;
/**
* <p>Abstract AbstractPostOperation class.</p>
*/
public abstract class AbstractPostTaxonOperation extends AbstractPostOperation<Taxon> {
- /**
- * A reference to the taxons TaxonNode
- */
- protected ITaxonTreeNode taxonNode;
-
- protected UUID parentNodeUuid;
-
-
- /**
- * <p>Constructor for AbstractPostOperation.</p>
- *
- * @param label a {@link java.lang.String} object.
- * @param undoContext a {@link org.eclipse.core.commands.operations.IUndoContext} object.
- * @param taxon a {@link eu.etaxonomy.cdm.model.taxon.Taxon} object.
- * @param postOperationEnabled a {@link eu.etaxonomy.taxeditor.operation.IPostOperationEnabled} object.
- */
- public AbstractPostTaxonOperation(String label, IUndoContext undoContext,
- Taxon taxon, IPostOperationEnabled postOperationEnabled) {
- super(label, undoContext, taxon, postOperationEnabled);
- }
-
- /**
- * <p>Constructor for AbstractPostOperation.</p>
- *
- * @param label a {@link java.lang.String} object.
- * @param undoContext a {@link org.eclipse.core.commands.operations.IUndoContext} object.
- * @param taxonNode a {@link eu.etaxonomy.cdm.model.taxon.TaxonNode} object.
- * @param postOperationEnabled a {@link eu.etaxonomy.taxeditor.operation.IPostOperationEnabled} object.
- */
- public AbstractPostTaxonOperation(String label, IUndoContext undoContext, TaxonNode taxonNode, IPostOperationEnabled postOperationEnabled){
- this(label, undoContext, taxonNode.getTaxon(), postOperationEnabled);
- this.taxonNode = taxonNode;
- }
-
- /**
- * <p>Constructor for AbstractPostOperation.</p>
- *
- * @param label a {@link java.lang.String} object.
- * @param undoContext a {@link org.eclipse.core.commands.operations.IUndoContext} object.
- * @param parentNodeUuid a {@link java.util.UUID} object.
- * @param postOperationEnabled a {@link eu.etaxonomy.taxeditor.operation.IPostOperationEnabled} object.
- */
- public AbstractPostTaxonOperation(String label, IUndoContext undoContext, UUID parentNodeUuid, IPostOperationEnabled postOperationEnabled){
- super(label, undoContext, null, postOperationEnabled);
- this.parentNodeUuid = parentNodeUuid;
- }
-
- /**
- * <p>Constructor for AbstractPostOperation.</p>
- *
- * @param label a {@link java.lang.String} object.
- * @param undoContext a {@link org.eclipse.core.commands.operations.IUndoContext} object.
- * @param postOperationEnabled a {@link eu.etaxonomy.taxeditor.operation.IPostOperationEnabled} object.
- */
- public AbstractPostTaxonOperation(String label, IUndoContext undoContext,
- IPostOperationEnabled postOperationEnabled) {
- super(label, undoContext, null, postOperationEnabled);
- }
+ /**
+ * A reference to the taxons TaxonNode
+ */
+ protected ITaxonTreeNode taxonNode;
+
+ protected UUID parentNodeUuid;
+
+
+ /**
+ * <p>Constructor for AbstractPostOperation.</p>
+ *
+ * @param label a {@link java.lang.String} object.
+ * @param undoContext a {@link org.eclipse.core.commands.operations.IUndoContext} object.
+ * @param taxon a {@link eu.etaxonomy.cdm.model.taxon.Taxon} object.
+ * @param postOperationEnabled a {@link eu.etaxonomy.taxeditor.operation.IPostOperationEnabled} object.
+ */
+ public AbstractPostTaxonOperation(String label, IUndoContext undoContext,
+ Taxon taxon, IPostOperationEnabled postOperationEnabled) {
+ super(label, undoContext, taxon, postOperationEnabled, null);
+ }
+
+ public AbstractPostTaxonOperation(String label, IUndoContext undoContext,
+ Taxon taxon, IPostOperationEnabled postOperationEnabled, ICdmEntitySessionEnabled cdmEntitySessionEnabled) {
+ super(label, undoContext, taxon, postOperationEnabled, cdmEntitySessionEnabled);
+ }
+
+ /**
+ * <p>Constructor for AbstractPostOperation.</p>
+ *
+ * @param label a {@link java.lang.String} object.
+ * @param undoContext a {@link org.eclipse.core.commands.operations.IUndoContext} object.
+ * @param taxonNode a {@link eu.etaxonomy.cdm.model.taxon.TaxonNode} object.
+ * @param postOperationEnabled a {@link eu.etaxonomy.taxeditor.operation.IPostOperationEnabled} object.
+ */
+ public AbstractPostTaxonOperation(String label, IUndoContext undoContext, TaxonNode taxonNode, IPostOperationEnabled postOperationEnabled){
+ this(label, undoContext, taxonNode, postOperationEnabled, null);
+ }
+
+ public AbstractPostTaxonOperation(String label, IUndoContext undoContext, TaxonNode taxonNode, IPostOperationEnabled postOperationEnabled, ICdmEntitySessionEnabled cdmEntitySessionEnabled){
+ this(label, undoContext, taxonNode.getTaxon(), postOperationEnabled, cdmEntitySessionEnabled);
+ this.taxonNode = taxonNode;
+ }
+
+ /**
+ * <p>Constructor for AbstractPostOperation.</p>
+ *
+ * @param label a {@link java.lang.String} object.
+ * @param undoContext a {@link org.eclipse.core.commands.operations.IUndoContext} object.
+ * @param parentNodeUuid a {@link java.util.UUID} object.
+ * @param postOperationEnabled a {@link eu.etaxonomy.taxeditor.operation.IPostOperationEnabled} object.
+ */
+ public AbstractPostTaxonOperation(String label, IUndoContext undoContext, UUID parentNodeUuid, IPostOperationEnabled postOperationEnabled){
+ super(label, undoContext, null, postOperationEnabled, null);
+ this.parentNodeUuid = parentNodeUuid;
+ }
+
+ /**
+ * <p>Constructor for AbstractPostOperation.</p>
+ *
+ * @param label a {@link java.lang.String} object.
+ * @param undoContext a {@link org.eclipse.core.commands.operations.IUndoContext} object.
+ * @param postOperationEnabled a {@link eu.etaxonomy.taxeditor.operation.IPostOperationEnabled} object.
+ */
+ public AbstractPostTaxonOperation(String label, IUndoContext undoContext,
+ IPostOperationEnabled postOperationEnabled) {
+ super(label, undoContext, null, postOperationEnabled, null);
+ }
+
+ public AbstractPostTaxonOperation(String label, IUndoContext undoContext,
+ IPostOperationEnabled postOperationEnabled, ICdmEntitySessionEnabled cdmEntitySessionEnabled) {
+ super(label, undoContext, null, postOperationEnabled, cdmEntitySessionEnabled);
+ }
/**
* @param text
--- /dev/null
+// $Id$
+/**
+* Copyright (C) 2015 EDIT
+* European Distributed Institute of Taxonomy
+* http://www.e-taxonomy.eu
+*
+* The contents of this file are subject to the Mozilla Public License Version 1.1
+* See LICENSE.TXT at the top of this package for the full license terms.
+*/
+package eu.etaxonomy.taxeditor.operation;
+
+import org.eclipse.core.commands.AbstractHandler;
+import org.eclipse.core.commands.ExecutionEvent;
+import org.eclipse.core.commands.ExecutionException;
+import org.eclipse.core.commands.operations.AbstractOperation;
+import org.eclipse.core.runtime.IStatus;
+import org.eclipse.jface.dialogs.ErrorDialog;
+
+import eu.etaxonomy.taxeditor.model.AbstractUtility;
+import eu.etaxonomy.taxeditor.model.MessagingUtils;
+
+/**
+ * @author cmathew
+ * @date 16 Jun 2015
+ *
+ */
+public abstract class RemotingCdmHandler extends AbstractHandler {
+
+ private final String label;
+
+ public RemotingCdmHandler(String label) {
+ this.label = label;
+ }
+
+ /* (non-Javadoc)
+ * @see org.eclipse.core.commands.IHandler#execute(org.eclipse.core.commands.ExecutionEvent)
+ */
+ @Override
+ public Object execute(ExecutionEvent event) throws ExecutionException {
+ IStatus allowStatus = allowOperations(event);
+ if(allowStatus.isOK()) {
+ AbstractOperation op = prepareOperation(event);
+ if(op != null) {
+ AbstractUtility.executeOperation(op, this);
+ }
+ } else if(allowStatus.getSeverity() == IStatus.ERROR ||
+ allowStatus.getSeverity() == IStatus.WARNING ||
+ allowStatus.getSeverity() == IStatus.INFO) {
+ MessagingUtils.warningDialog("Can not perform " + label, event.getTrigger(), allowStatus);
+ }
+ return null;
+ }
+
+ public void postOperation(IStatus status) {
+
+ switch(status.getSeverity()) {
+ case IStatus.WARNING:
+ ErrorDialog.openError(null, "Operation successful but with warnings", null, status);
+ break;
+ case IStatus.ERROR:
+ ErrorDialog.openError(null, "Error executing operation", null, status);
+ break;
+ default:
+ }
+
+ onComplete();
+ }
+
+ public abstract IStatus allowOperations(ExecutionEvent event);
+
+ public abstract AbstractOperation prepareOperation(ExecutionEvent event);
+
+ public abstract void onComplete();
+
+}
--- /dev/null
+// $Id$
+/**
+* Copyright (C) 2015 EDIT
+* European Distributed Institute of Taxonomy
+* http://www.e-taxonomy.eu
+*
+* The contents of this file are subject to the Mozilla Public License Version 1.1
+* See LICENSE.TXT at the top of this package for the full license terms.
+*/
+package eu.etaxonomy.taxeditor.operation;
+
+import org.eclipse.core.runtime.IAdaptable;
+import org.eclipse.core.runtime.IProgressMonitor;
+import org.eclipse.core.runtime.IStatus;
+import org.eclipse.core.runtime.Status;
+
+import eu.etaxonomy.cdm.api.application.CdmChangeEvent.Action;
+import eu.etaxonomy.cdm.model.common.CdmBase;
+
+/**
+ * @author cmathew
+ * @date 21 Jul 2015
+ *
+ */
+public abstract class RemotingCdmMergeOperation extends RemotingCdmOperation {
+
+ private CdmBase mergedCdmEntity;
+
+ public RemotingCdmMergeOperation(String label, Action action, Object source, boolean async) {
+ super(label, action, source, async);
+ }
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.operation.RemotingCdmOperation#doExecute(org.eclipse.core.runtime.IProgressMonitor, org.eclipse.core.runtime.IAdaptable)
+ */
+ @Override
+ protected boolean doExecute(IProgressMonitor monitor, IAdaptable info) {
+ try {
+ mergedCdmEntity = doMergeExecute(monitor, info);
+ } catch (Exception e) {
+ throw new RuntimeException(e);
+ }
+ return true;
+ }
+
+ protected abstract CdmBase doMergeExecute(IProgressMonitor monitor, IAdaptable info) throws Exception;
+
+ @Override
+ protected void postExecute(boolean success) {
+ if(success && mergedCdmEntity != null) {
+ fireDataChangeEvent(mergedCdmEntity);
+ }
+
+ }
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.operation.RemotingCdmOperation#onComplete(boolean)
+ */
+ @Override
+ protected IStatus onComplete(boolean success) {
+ return Status.OK_STATUS;
+ }
+
+}
--- /dev/null
+// $Id$
+/**
+* Copyright (C) 2015 EDIT
+* European Distributed Institute of Taxonomy
+* http://www.e-taxonomy.eu
+*
+* The contents of this file are subject to the Mozilla Public License Version 1.1
+* See LICENSE.TXT at the top of this package for the full license terms.
+*/
+package eu.etaxonomy.taxeditor.operation;
+
+import java.util.Set;
+
+import org.eclipse.core.commands.ExecutionException;
+import org.eclipse.core.commands.operations.AbstractOperation;
+import org.eclipse.core.runtime.IAdaptable;
+import org.eclipse.core.runtime.IProgressMonitor;
+import org.eclipse.core.runtime.IStatus;
+
+import eu.etaxonomy.cdm.api.application.CdmApplicationState;
+import eu.etaxonomy.cdm.api.application.CdmChangeEvent;
+import eu.etaxonomy.cdm.api.application.CdmChangeEvent.Action;
+import eu.etaxonomy.cdm.api.service.UpdateResult;
+import eu.etaxonomy.cdm.model.common.CdmBase;
+
+/**
+ * @author cmathew
+ * @date 16 Jun 2015
+ *
+ */
+public abstract class RemotingCdmOperation extends AbstractOperation {
+
+ private final Object source;
+ private final Action action;
+ private final boolean async;
+ protected Class entityType;
+
+ public RemotingCdmOperation(String label, Action action, Object source, boolean async) {
+ super(label);
+ this.source = source;
+ this.action = action;
+ this.async = async;
+ }
+
+ /* (non-Javadoc)
+ * @see org.eclipse.core.commands.operations.AbstractOperation#execute(org.eclipse.core.runtime.IProgressMonitor, org.eclipse.core.runtime.IAdaptable)
+ */
+ @Override
+ public IStatus execute(IProgressMonitor monitor, IAdaptable info) throws ExecutionException {
+
+ boolean success = doExecute(monitor, info);
+ postExecute(success);
+ return onComplete(success);
+ }
+
+ protected abstract boolean doExecute(IProgressMonitor monitor, IAdaptable info);
+
+ protected void postExecute(boolean success) {}
+
+ protected abstract IStatus onComplete(boolean success);
+
+ protected void fireDataChangeEvent(Set<CdmBase> changedObjects) {
+ if(changedObjects != null && !changedObjects.isEmpty()) {
+ CdmApplicationState.getCurrentDataChangeService().fireChangeEvent(new CdmChangeEvent(action, changedObjects, source.getClass()), async);
+ }
+ }
+
+ protected void fireDataChangeEvent(UpdateResult updateResult) {
+ Set<CdmBase> updatedObjects = updateResult.getUpdatedObjects();
+ CdmApplicationState.getCurrentDataChangeService()
+ .fireChangeEvent(new CdmChangeEvent(action, updatedObjects, source.getClass(), entityType), async);
+ }
+
+ protected void fireDataChangeEvent(CdmBase cdmBase) {
+ if(cdmBase != null) {
+ CdmApplicationState.getCurrentDataChangeService().fireChangeEvent(new CdmChangeEvent(action, cdmBase, source.getClass()), async);
+ }
+ }
+
+ /* (non-Javadoc)
+ * @see org.eclipse.core.commands.operations.AbstractOperation#redo(org.eclipse.core.runtime.IProgressMonitor, org.eclipse.core.runtime.IAdaptable)
+ */
+ @Override
+ public IStatus redo(IProgressMonitor monitor, IAdaptable info) throws ExecutionException {
+ // TODO Auto-generated method stub
+ return null;
+ }
+
+ /* (non-Javadoc)
+ * @see org.eclipse.core.commands.operations.AbstractOperation#undo(org.eclipse.core.runtime.IProgressMonitor, org.eclipse.core.runtime.IAdaptable)
+ */
+ @Override
+ public IStatus undo(IProgressMonitor monitor, IAdaptable info) throws ExecutionException {
+ // TODO Auto-generated method stub
+ return null;
+ }
+
+}
--- /dev/null
+// $Id$
+/**
+ * Copyright (C) 2015 EDIT
+ * European Distributed Institute of Taxonomy
+ * http://www.e-taxonomy.eu
+ *
+ * The contents of this file are subject to the Mozilla Public License Version 1.1
+ * See LICENSE.TXT at the top of this package for the full license terms.
+ */
+package eu.etaxonomy.taxeditor.operation;
+
+import java.util.Collection;
+import java.util.HashSet;
+import java.util.Set;
+
+import org.eclipse.core.runtime.IAdaptable;
+import org.eclipse.core.runtime.IProgressMonitor;
+import org.eclipse.core.runtime.IStatus;
+import org.eclipse.core.runtime.MultiStatus;
+import org.eclipse.core.runtime.Status;
+
+import eu.etaxonomy.cdm.api.application.CdmChangeEvent.Action;
+import eu.etaxonomy.cdm.api.service.UpdateResult;
+
+/**
+ * @author cmathew
+ * @date 16 Jun 2015
+ *
+ */
+public abstract class RemotingCdmUpdateOperation extends RemotingCdmOperation {
+
+ private UpdateResult updateResult;
+ public static boolean throwExceptions = false;
+
+ /**
+ * @param label
+ */
+ public RemotingCdmUpdateOperation(String label, Action action, Object source, boolean async) {
+ super(label, action, source, async);
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.operation.RemotingCdmOperation#doExecute(org.eclipse.core.runtime.IProgressMonitor, org.eclipse.core.runtime.IAdaptable)
+ */
+ @Override
+ protected boolean doExecute(IProgressMonitor monitor, IAdaptable info) {
+ try {
+ updateResult = doUpdateExecute(monitor, info);
+ } catch (Exception e) {
+ if(throwExceptions) {
+ throw new RuntimeException(e);
+ } else {
+ UpdateResult exceptionResult = new UpdateResult();
+ exceptionResult.addException(e);
+ exceptionResult.setAbort();
+ updateResult = exceptionResult;
+ }
+ }
+ return updateResult.isOk();
+ }
+
+ protected abstract UpdateResult doUpdateExecute(IProgressMonitor monitor, IAdaptable info) throws Exception;
+
+ @Override
+ protected void postExecute(boolean success) {
+ if(success && updateResult != null) {
+ fireDataChangeEvent(updateResult);
+ }
+
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.operation.RemotingCdmOperation#onComplete(boolean)
+ */
+ @Override
+ protected IStatus onComplete(boolean success) {
+
+ if(updateResult != null) {
+ int statusFlag = IStatus.OK;
+
+ Collection<Exception> exceptions = updateResult.getExceptions();
+ StringBuffer statusMsg = new StringBuffer();
+ if(success && updateResult.isOk()) {
+ if(exceptions.isEmpty()) {
+ return Status.OK_STATUS;
+ } else {
+ statusFlag = IStatus.WARNING;
+ statusMsg.append(getLabel() + " executed sucessfully but with warnings." + System.lineSeparator());
+ }
+ } else if (updateResult.isError()) {
+ statusFlag = IStatus.ERROR;
+ statusMsg.append(getLabel() + " failed." + System.lineSeparator());
+ } else if (updateResult.isAbort()) {
+ statusFlag = IStatus.ERROR;
+ statusMsg.append(getLabel() + " aborted." + System.lineSeparator());
+ }
+
+ Status[] childStatus = new Status[exceptions.size()];
+ int count = 0;
+ Set<String> messages = new HashSet<String>();
+ for(Exception ex : exceptions) {
+ Status status = new Status(statusFlag,
+ "unknown",
+ statusFlag,
+ ex.getLocalizedMessage(),
+ ex);
+ messages.add(ex.getLocalizedMessage());
+ childStatus[count] = status;
+ count++;
+ }
+
+ statusMsg.append("Please click on the 'Details' button to see all the errors / warnings");
+
+ MultiStatus multiStatus = new MultiStatus("unknown",
+ statusFlag,
+ childStatus,
+ statusMsg.toString(),
+ null);
+ return multiStatus;
+ }
+ return null;
+ }
+}
import eu.etaxonomy.cdm.model.reference.INomenclaturalReference;
import eu.etaxonomy.cdm.model.reference.Reference;
import eu.etaxonomy.cdm.strategy.match.MatchException;
+import eu.etaxonomy.cdm.strategy.match.MatchStrategyConfigurator.MatchStrategy;
import eu.etaxonomy.cdm.strategy.parser.NonViralNameParserImpl;
import eu.etaxonomy.taxeditor.model.MessagingUtils;
import eu.etaxonomy.taxeditor.preference.PreferencesUtil;
* @param unparsedNameString a {@link java.lang.String} object.
* @return a {@link eu.etaxonomy.cdm.model.name.TaxonNameBase} object.
*/
- public static TaxonNameBase parseReferencedName(String unparsedNameString, Rank rank){
- TaxonNameBase name = nonViralNameParser.parseReferencedName(unparsedNameString,
+ public static NonViralName parseReferencedName(String unparsedNameString, Rank rank){
+ NonViralName name = nonViralNameParser.parseReferencedName(unparsedNameString,
PreferencesUtil.getPreferredNomenclaturalCode(), rank);
// if (name.hasProblem()) {
return name;
}
- public static TaxonNameBase parseName(String unparsedNameString, Rank rank){
- TaxonNameBase name = nonViralNameParser.parseFullName(unparsedNameString,
+ public static NonViralName parseName(String unparsedNameString, Rank rank){
+ NonViralName name = nonViralNameParser.parseFullName(unparsedNameString,
PreferencesUtil.getPreferredNomenclaturalCode(), rank);
return name;
*
* @return a {@link eu.etaxonomy.cdm.model.name.TaxonNameBase} object.
*/
- public static TaxonNameBase createEmptyName(){
+ public static NonViralName createEmptyName(){
return nonViralNameParser.getNonViralNameInstance("", PreferencesUtil.getPreferredNomenclaturalCode());
}
return new ArrayList<INomenclaturalReference>();
}
try{
- return CdmStore.getCommonService().findMatching(nomenclaturalReference, MatchStrategyConfigurator.ReferenceMatchStrategy());
+
+ return CdmStore.getCommonService().findMatching(nomenclaturalReference, MatchStrategy.Reference);
+
}catch (MatchException e) {
MessagingUtils.error(this.getClass(), "Error finding matching references", e);
}
}
try{
- return CdmStore.getCommonService().findMatching(authorTeam, MatchStrategyConfigurator.TeamOrPersonMatchStrategy());
+
+ return CdmStore.getCommonService().findMatching(authorTeam, MatchStrategy.TeamOrPerson);
+
}catch (MatchException e) {
MessagingUtils.error(this.getClass(), "Error finding matching authors", e);
}
private List<TaxonNameBase> findMatchingLatinNames(TaxonNameBase taxonNameBase) {
try {
- return CdmStore.getCommonService().findMatching(taxonNameBase, MatchStrategyConfigurator.NonViralNameMatchStrategy());
+
+ return CdmStore.getCommonService().findMatching(taxonNameBase, MatchStrategy.NonViralName);
+
} catch (MatchException e) {
MessagingUtils.error(this.getClass(), "Error finding matching names", e);
// $Id$
/**
-* Copyright (C) 2007 EDIT
-* European Distributed Institute of Taxonomy
-* http://www.e-taxonomy.eu
-*
-* The contents of this file are subject to the Mozilla Public License Version 1.1
-* See LICENSE.TXT at the top of this package for the full license terms.
-*/
+ * Copyright (C) 2007 EDIT
+ * European Distributed Institute of Taxonomy
+ * http://www.e-taxonomy.eu
+ *
+ * The contents of this file are subject to the Mozilla Public License Version 1.1
+ * See LICENSE.TXT at the top of this package for the full license terms.
+ */
package eu.etaxonomy.taxeditor.preference;
*/
public class CdmStorePropertyTester extends PropertyTester {
- private static final String EDITOR_IS_CONNECTED_TO_DB = "isCdmStoreConnected";
+ private static final String EDITOR_IS_CONNECTED_TO_DB = "isCdmStoreConnected";
+ private static final String IS_REMOTING = "isRemoting";
+ private static final String IS_STANDALONE = "isStandAlone";
+
+ @Override
+ public boolean test(Object receiver, String property, Object[] args,
+ Object expectedValue) {
+
+ if(EDITOR_IS_CONNECTED_TO_DB.equals(property)){
+ return isCdmStoreConnected();
+ }
+
+ if(IS_REMOTING.equals(property)){
+ if(!isCdmStoreConnected()) {
+ return false;
+ } else {
+ return isRemoting();
+ }
+ }
+
+ if(IS_STANDALONE.equals(property)){
+ if(!isCdmStoreConnected()) {
+ return false;
+ } else {
+ return !isRemoting();
+ }
+ }
+ return false;
+ }
+
+ private boolean isCdmStoreConnected(){
+ boolean active = CdmStore.isActive();
+ return active;
+ }
+
+ private boolean isRemoting() {
+ return CdmStore.getCurrentSessionManager().isRemoting();
- @Override
- public boolean test(Object receiver, String property, Object[] args,
- Object expectedValue) {
+ }
- if(EDITOR_IS_CONNECTED_TO_DB.equals(property)){
- return isCdmStoreConnected();
- }
- return false;
- }
- private boolean isCdmStoreConnected(){
- boolean active = CdmStore.isActive();
- return active;
- }
}
import java.util.List;
-import org.eclipse.jface.preference.PreferencePage;
import org.eclipse.jface.viewers.ISelectionChangedListener;
import org.eclipse.jface.viewers.IStructuredSelection;
import org.eclipse.jface.viewers.ListViewer;
import eu.etaxonomy.taxeditor.featuretree.FeatureTreeContentProvider;
import eu.etaxonomy.taxeditor.featuretree.FeatureTreeLabelProvider;
import eu.etaxonomy.taxeditor.model.MessagingUtils;
+import eu.etaxonomy.taxeditor.preference.menu.CdmPreferencePage;
import eu.etaxonomy.taxeditor.store.CdmStore;
/**
* @created Sep 16, 2010
* @version 1.0
*/
-public class DefaultFeatureTreePreferenecs extends PreferencePage implements IWorkbenchPreferencePage {
+public class DefaultFeatureTreePreferenecs extends CdmPreferencePage implements IWorkbenchPreferencePage {
private FeatureTree defaultFeatureTreeForTextualDescription;
private FeatureTree defaultFeatureTreeForStructuredDescription;
public static final String SHOW_ADVANCED_MEDIA_SECTION = "eu.etaxonomy.taxeditor.media.showAdvancedMedia";
+ public static final String ALWAYS_OPEN_SPECIMEN_IN_EDITOR = "eu.etaxonomy.taxeditor.specimen.alwaysOpenSpecimenInEditor";
+
+ public static final String PROMPT_FOR_OPEN_SPECIMEN_IN_EDITOR = "eu.etaxonomy.taxeditor.specimen.promptForOpenSpecimenInEditor";
+
// TODO RL
public static final String IS_RL = "eu.etaxonomy.taxeditor.isRL";
*/
package eu.etaxonomy.taxeditor.preference;
+import org.eclipse.jface.dialogs.MessageDialogWithToggle;
import org.eclipse.jface.preference.BooleanFieldEditor;
+import org.eclipse.jface.preference.ComboFieldEditor;
import org.eclipse.jface.preference.FieldEditorPreferencePage;
import org.eclipse.ui.IWorkbench;
import org.eclipse.ui.IWorkbenchPreferencePage;
*/
public class SpecimenOrObservationPreferences extends FieldEditorPreferencePage implements IWorkbenchPreferencePage {
- /* (non-Javadoc)
- * @see org.eclipse.ui.IWorkbenchPreferencePage#init(org.eclipse.ui.IWorkbench)
- */
@Override
public void init(IWorkbench workbench) {
setPreferenceStore(PreferencesUtil.getPreferenceStore());
}
- /* (non-Javadoc)
- * @see org.eclipse.jface.preference.FieldEditorPreferencePage#createFieldEditors()
- */
@Override
protected void createFieldEditors() {
addField(new BooleanFieldEditor(IPreferenceKeys.DETERMINATION_ONLY_FOR_FIELD_UNITS,
addField(new BooleanFieldEditor(IPreferenceKeys.SHOW_TAXON_ASSOCIATIONS,
"Show taxon associations of a specimen in the details view",
getFieldEditorParent()));
-
+ addField(new ComboFieldEditor(IPreferenceKeys.ALWAYS_OPEN_SPECIMEN_IN_EDITOR,
+ "Open newly created specimens in specimen editor", new String[][] {
+ { "always", MessageDialogWithToggle.ALWAYS }, { "never", MessageDialogWithToggle.NEVER } },
+ getFieldEditorParent()));
}
import eu.etaxonomy.cdm.strategy.match.MatchException;
import eu.etaxonomy.cdm.strategy.match.MatchMode;
import eu.etaxonomy.taxeditor.model.MessagingUtils;
-import eu.etaxonomy.taxeditor.parser.MatchStrategyConfigurator;
+import eu.etaxonomy.taxeditor.preference.PreferencesUtil;
import eu.etaxonomy.taxeditor.store.CdmStore;
/**
/** {@inheritDoc} */
@Override
protected void performApply() {
- MatchStrategyConfigurator.setMatchStrategy(matchStrategy);
+ PreferencesUtil.setMatchStrategy(matchStrategy);
super.performApply();
}
// $Id$
/**
* Copyright (C) 2007 EDIT
-* European Distributed Institute of Taxonomy
+* European Distributed Institute of Taxonomy
* http://www.e-taxonomy.eu
-*
+*
* The contents of this file are subject to the Mozilla Public License Version 1.1
* See LICENSE.TXT at the top of this package for the full license terms.
*/
import eu.etaxonomy.cdm.model.name.NonViralName;
import eu.etaxonomy.cdm.strategy.match.IMatchStrategy;
import eu.etaxonomy.cdm.strategy.match.MatchException;
+import eu.etaxonomy.cdm.strategy.match.MatchStrategyConfigurator;
import eu.etaxonomy.taxeditor.model.MessagingUtils;
-import eu.etaxonomy.taxeditor.parser.MatchStrategyConfigurator;
/**
* <p>NonViralNameMatchingPreference class.</p>
* @see org.eclipse.ui.IWorkbenchPreferencePage#init(org.eclipse.ui.IWorkbench)
*/
/** {@inheritDoc} */
- public void init(IWorkbench workbench) {
+ @Override
+ public void init(IWorkbench workbench) {
clazz = NonViralName.class;
-
+
try {
matchStrategy = MatchStrategyConfigurator.NonViralNameMatchStrategy();
} catch (MatchException e) {
throw new RuntimeException(e);
}
}
-
+
/* (non-Javadoc)
* @see eu.etaxonomy.taxeditor.preference.matching.AbstractMatchingPreferences#getDefaultMatchStrategy()
*/
// $Id$
/**
* Copyright (C) 2007 EDIT
-* European Distributed Institute of Taxonomy
+* European Distributed Institute of Taxonomy
* http://www.e-taxonomy.eu
-*
+*
* The contents of this file are subject to the Mozilla Public License Version 1.1
* See LICENSE.TXT at the top of this package for the full license terms.
*/
import eu.etaxonomy.cdm.model.reference.Reference;
import eu.etaxonomy.cdm.strategy.match.IMatchStrategy;
import eu.etaxonomy.cdm.strategy.match.MatchException;
+import eu.etaxonomy.cdm.strategy.match.MatchStrategyConfigurator;
import eu.etaxonomy.taxeditor.model.MessagingUtils;
-import eu.etaxonomy.taxeditor.parser.MatchStrategyConfigurator;
/**
* <p>ReferenceMatchingPreference class.</p>
* @see org.eclipse.ui.IWorkbenchPreferencePage#init(org.eclipse.ui.IWorkbench)
*/
/** {@inheritDoc} */
- public void init(IWorkbench workbench) {
+ @Override
+ public void init(IWorkbench workbench) {
clazz = Reference.class;
-
+
try {
matchStrategy = MatchStrategyConfigurator.ReferenceMatchStrategy();
} catch (MatchException e) {
// $Id$
/**
* Copyright (C) 2007 EDIT
-* European Distributed Institute of Taxonomy
+* European Distributed Institute of Taxonomy
* http://www.e-taxonomy.eu
-*
+*
* The contents of this file are subject to the Mozilla Public License Version 1.1
* See LICENSE.TXT at the top of this package for the full license terms.
*/
import eu.etaxonomy.cdm.model.agent.TeamOrPersonBase;
import eu.etaxonomy.cdm.strategy.match.IMatchStrategy;
import eu.etaxonomy.cdm.strategy.match.MatchException;
+import eu.etaxonomy.cdm.strategy.match.MatchStrategyConfigurator;
import eu.etaxonomy.taxeditor.model.MessagingUtils;
-import eu.etaxonomy.taxeditor.parser.MatchStrategyConfigurator;
/**
* <p>TeamOrPersonMatchingPreference class.</p>
* @see org.eclipse.ui.IWorkbenchPreferencePage#init(org.eclipse.ui.IWorkbench)
*/
/** {@inheritDoc} */
- public void init(IWorkbench workbench) {
+ @Override
+ public void init(IWorkbench workbench) {
clazz = TeamOrPersonBase.class;
-
+
try {
matchStrategy = MatchStrategyConfigurator.TeamOrPersonMatchStrategy();
} catch (MatchException e) {
MessagingUtils.error(this.getClass(), e);
throw new RuntimeException(e);
}
- }
+ }
/* (non-Javadoc)
* @see eu.etaxonomy.taxeditor.preference.matching.AbstractMatchingPreferences#getDefaultMatchStrategy()
import org.eclipse.core.commands.ParameterizedCommand;
import org.eclipse.core.commands.common.NotDefinedException;
import org.eclipse.core.runtime.IStatus;
-import org.eclipse.jface.preference.PreferencePage;
import org.eclipse.jface.viewers.CheckStateChangedEvent;
import org.eclipse.jface.viewers.CheckboxTableViewer;
import org.eclipse.jface.viewers.ICheckStateListener;
* @created 12.06.2009
* @version 1.0
*/
-public abstract class AbstractMenuPreferences<T extends DefinedTermBase> extends PreferencePage implements
+public abstract class AbstractMenuPreferences<T extends DefinedTermBase> extends CdmPreferencePage implements
IWorkbenchPreferencePage, IConversationEnabled{
private Button toggleButton;
PreferencesUtil.firePreferencesChanged(this.getClass());
- return true;
+
+ return super.performOk();
}
private boolean checkNoneChecked(){
--- /dev/null
+// $Id$
+/**
+* Copyright (C) 2015 EDIT
+* European Distributed Institute of Taxonomy
+* http://www.e-taxonomy.eu
+*
+* The contents of this file are subject to the Mozilla Public License Version 1.1
+* See LICENSE.TXT at the top of this package for the full license terms.
+*/
+package eu.etaxonomy.taxeditor.preference.menu;
+
+import java.util.Collection;
+import java.util.List;
+import java.util.Map;
+
+import org.eclipse.jface.preference.PreferencePage;
+
+import eu.etaxonomy.cdm.model.common.CdmBase;
+import eu.etaxonomy.taxeditor.session.ICdmEntitySession;
+import eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled;
+import eu.etaxonomy.taxeditor.store.CdmStore;
+
+/**
+ * @author cmathew
+ * @date 30 Jul 2015
+ *
+ */
+public abstract class CdmPreferencePage extends PreferencePage implements ICdmEntitySessionEnabled {
+
+ public CdmPreferencePage() {
+ bindNullSession();
+ }
+
+ public CdmPreferencePage(String title) {
+ super(title);
+ bindNullSession();
+ }
+
+ private void bindNullSession() {
+ if(CdmStore.isActive()) {
+ CdmStore.getCurrentSessionManager().bindNullSession(this);
+ }
+ }
+
+ protected void disposeNullSession() {
+ if(CdmStore.isActive()) {
+ CdmStore.getCurrentSessionManager().dispose(this);
+ }
+ }
+
+ @Override
+ public boolean performOk() {
+ disposeNullSession();
+ return super.performOk();
+ }
+
+ @Override
+ public boolean performCancel() {
+ disposeNullSession();
+ return super.performCancel();
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled#getCdmEntitySession()
+ */
+ @Override
+ public ICdmEntitySession getCdmEntitySession() {
+ return CdmStore.getCurrentSessionManager().getNullSession();
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled#getRootEntities()
+ */
+ @Override
+ public <T extends CdmBase> Collection<T> getRootEntities() {
+ return null;
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled#getPropertyPathsMap()
+ */
+ @Override
+ public Map<Object, List<String>> getPropertyPathsMap() {
+ return null;
+ }
+
+}
import java.util.ArrayList;
import java.util.Arrays;
+import java.util.Collection;
+import java.util.HashMap;
import java.util.List;
+import java.util.Map;
import java.util.Set;
import java.util.UUID;
import eu.etaxonomy.cdm.api.service.ITermService;
import eu.etaxonomy.cdm.api.service.IVocabularyService;
+import eu.etaxonomy.cdm.model.common.CdmBase;
import eu.etaxonomy.cdm.model.common.DefinedTermBase;
import eu.etaxonomy.cdm.model.common.TermType;
import eu.etaxonomy.cdm.model.common.TermVocabulary;
import eu.etaxonomy.taxeditor.editor.definedterm.TermContentProvider;
import eu.etaxonomy.taxeditor.editor.definedterm.TermLabelProvider;
import eu.etaxonomy.taxeditor.preference.PreferencesUtil;
+import eu.etaxonomy.taxeditor.session.ICdmEntitySession;
+import eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled;
import eu.etaxonomy.taxeditor.store.CdmStore;
/**
* @date 21.07.2014
*
*/
-public class AvailableDistributionPage extends WizardPage {
+public class AvailableDistributionPage extends WizardPage implements ICdmEntitySessionEnabled {
private CheckboxTreeViewer viewer;
protected AvailableDistributionPage(String pageName) {
super(pageName);
// TODO check if configuration exists
+ CdmStore.getCurrentSessionManager().bindNullSession(this);
}
/*
}
}
+ @Override
+ public void dispose() {
+ CdmStore.getCurrentSessionManager().dispose(this);
+ super.dispose();
+ }
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled#getCdmEntitySession()
+ */
+ @Override
+ public ICdmEntitySession getCdmEntitySession() {
+ return CdmStore.getCurrentSessionManager().getNullSession();
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled#getRootEntities()
+ */
+ @Override
+ public <T extends CdmBase> Collection<T> getRootEntities() {
+ return null;
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled#getPropertyPathsMap()
+ */
+ @Override
+ public Map<Object, List<String>> getPropertyPathsMap() {
+ Map<Object, List<String>> propertyPathsMap = new HashMap<Object, List<String>>();
+ List<String> termsPropertyPaths = Arrays.asList(new String[] {
+ "includes"
+ });
+ propertyPathsMap.put("includes", termsPropertyPaths);
+ propertyPathsMap.put("terms", termsPropertyPaths);
+ return propertyPathsMap;
+ }
+
}
--- /dev/null
+// $Id$
+/**
+* Copyright (C) 2015 EDIT
+* European Distributed Institute of Taxonomy
+* http://www.e-taxonomy.eu
+*
+* The contents of this file are subject to the Mozilla Public License Version 1.1
+* See LICENSE.TXT at the top of this package for the full license terms.
+*/
+package eu.etaxonomy.taxeditor.store;
+
+/**
+ * @author cmathew
+ * @date 24 Jul 2015
+ *
+ */
+public class CdmAuthenticationException extends RuntimeException {
+
+ public CdmAuthenticationException(String message, Throwable t) {
+ super(message,t);
+ }
+
+}
package eu.etaxonomy.taxeditor.store;
-import java.lang.reflect.InvocationTargetException;
-import java.lang.reflect.Method;
-import java.lang.reflect.Type;
import java.util.EnumSet;
import org.eclipse.core.runtime.IProgressMonitor;
import org.springframework.core.io.ClassPathResource;
import org.springframework.core.io.Resource;
import org.springframework.security.access.PermissionEvaluator;
-import org.springframework.security.authentication.ProviderManager;
+import org.springframework.security.authentication.AuthenticationManager;
import org.springframework.security.core.Authentication;
import org.springframework.security.core.context.SecurityContext;
import org.springframework.security.core.context.SecurityContextHolder;
+import eu.etaxonomy.cdm.api.application.CdmApplicationException;
+import eu.etaxonomy.cdm.api.application.CdmApplicationRemoteController;
+import eu.etaxonomy.cdm.api.application.CdmApplicationState;
import eu.etaxonomy.cdm.api.application.ICdmApplicationConfiguration;
+import eu.etaxonomy.cdm.api.cache.CdmServiceCacher;
import eu.etaxonomy.cdm.api.conversation.ConversationHolder;
import eu.etaxonomy.cdm.api.service.ICommonService;
import eu.etaxonomy.cdm.api.service.IService;
import eu.etaxonomy.cdm.config.ICdmSource;
import eu.etaxonomy.cdm.database.DbSchemaValidation;
-import eu.etaxonomy.cdm.ext.geo.IEditGeoService;
import eu.etaxonomy.cdm.model.common.CdmBase;
import eu.etaxonomy.cdm.model.common.Language;
import eu.etaxonomy.cdm.persistence.hibernate.permission.CRUD;
import eu.etaxonomy.cdm.persistence.hibernate.permission.ICdmPermissionEvaluator;
import eu.etaxonomy.cdm.persistence.hibernate.permission.Role;
-import eu.etaxonomy.cdm.remote.CdmRemoteSourceException;
import eu.etaxonomy.taxeditor.datasource.CdmDataSourceRepository;
import eu.etaxonomy.taxeditor.io.ExportManager;
import eu.etaxonomy.taxeditor.io.ImportManager;
import eu.etaxonomy.taxeditor.model.AbstractUtility;
import eu.etaxonomy.taxeditor.model.MessagingUtils;
import eu.etaxonomy.taxeditor.preference.PreferencesUtil;
+import eu.etaxonomy.taxeditor.remoting.cache.CdmRemoteCacheManager;
+import eu.etaxonomy.taxeditor.session.ICdmEntitySessionManager;
+import eu.etaxonomy.taxeditor.session.mock.MockCdmEntitySessionManager;
import eu.etaxonomy.taxeditor.store.internal.TaxeditorStorePlugin;
+import eu.etaxonomy.taxeditor.ui.dialog.RemotingLoginDialog;
import eu.etaxonomy.taxeditor.view.datasource.CdmDataSourceViewPart;
/**
*/
public class CdmStore {
- private static final Resource DEFAULT_APPLICATION_CONTEXT = new ClassPathResource(
- "/eu/etaxonomy/cdm/editorApplicationContext.xml",
- TaxeditorStorePlugin.class);
- private static final DbSchemaValidation DEFAULT_DB_SCHEMA_VALIDATION = DbSchemaValidation.VALIDATE;
-
- private static CdmStore instance;
-
- private final ICdmApplicationConfiguration applicationConfiguration;
-
- private static ContextManager contextManager = new ContextManager();
-
- private static LoginManager loginManager = new LoginManager();
-
- private static TermManager termManager = new TermManager();
-
- private static SearchManager searchManager = new SearchManager();
-
- private static EditorManager editorManager = new EditorManager();
-
- private static UseObjectStore useObjectInitializer = new UseObjectStore();
-
- private static CdmStoreConnector job;
-
- private Language language;
-
- private ICdmSource cdmSource;
-
- private boolean isConnected;
-
- /**
- * <p>
- * getDefault
- * </p>
- *
- * @return a {@link eu.etaxonomy.taxeditor.store.CdmStore} object.
- */
- protected static CdmStore getDefault() {
- if (instance != null && instance.isConnected) {
- return instance;
- } else{// if (instance == null || !instance.isConnected) {
-
- MessagingUtils.noDataSourceWarningDialog(instance);
-
- AbstractUtility.showView(CdmDataSourceViewPart.ID);
- return null;
- }
- }
-
- /**
- * Initialize the with the last edited datasource
- */
- public static void connect() {
-
- ICdmSource cdmSource;
- try {
- cdmSource = CdmDataSourceRepository.getCurrentCdmSource();
- connect(cdmSource);
- } catch (CdmRemoteSourceException e) {
- MessagingUtils.messageDialog("Connection to CDM Source Failed", CdmStore.class, "Could not connect to target CDM Source", e);
- }
-
-
- }
-
- /**
- * Initialize with a specific datasource
- *
- * @param datasource
- * a {@link eu.etaxonomy.cdm.database.ICdmDataSource} object.
- */
- public static void connect(ICdmSource cdmSource) {
- connect(cdmSource, DEFAULT_DB_SCHEMA_VALIDATION,
- DEFAULT_APPLICATION_CONTEXT);
- }
-
- /**
- * Initialize and provide
- *
- * @param datasource
- * @param dbSchemaValidation
- * @param applicationContextBean
- */
- private static void connect(final ICdmSource cdmSource,
- final DbSchemaValidation dbSchemaValidation,
- final Resource applicationContextBean) {
- MessagingUtils.info("Connecting to datasource: " + cdmSource);
-
- job = new CdmStoreConnector(Display.getDefault(), cdmSource,
- dbSchemaValidation, applicationContextBean);
- job.setUser(true);
- job.setPriority(Job.BUILD);
- job.schedule();
-
- }
-
- public static boolean isConnecting() {
- return job != null && job.getState() == Job.RUNNING;
- }
-
- /**
- * Closes the current application context
- *
- * @param monitor
- * a {@link org.eclipse.core.runtime.IProgressMonitor} object.
- */
- public static void close(final IProgressMonitor monitor) {
- Display.getDefault().asyncExec(new Runnable() {
- /*
- * (non-Javadoc)
- *
- * @see java.lang.Runnable#run()
- */
- @Override
- public void run() {
- getContextManager().notifyContextAboutToStop(monitor);
- if ((monitor == null || (!monitor.isCanceled()) && isActive())) {
- getContextManager().notifyContextStop(monitor);
- instance.close();
- }
- }
- });
- }
-
- private void close() {
- isConnected = false;
- cdmSource = null;
- }
-
- static void setInstance(ICdmApplicationConfiguration applicationController,
- ICdmSource cdmSource) {
- instance = new CdmStore(applicationController, cdmSource);
- }
-
- private CdmStore(ICdmApplicationConfiguration applicationController,
- ICdmSource cdmSource) {
- this.applicationConfiguration = applicationController;
- this.cdmSource = cdmSource;
- isConnected = true;
- }
-
- /**
- * All calls to the datastore require
- *
- * @return
- */
- private ICdmApplicationConfiguration getApplicationConfiguration() {
- try {
- return applicationConfiguration;
- } catch (Exception e) {
- MessagingUtils.error(CdmStore.class, e);
- }
- return null;
- }
-
- /**
- * <p>
- * getCurrentApplicationController
- * </p>
- *
- * @return a
- * {@link eu.etaxonomy.cdm.remote.api.application.CdmApplicationController}
- * object.
- */
- public static ICdmApplicationConfiguration getCurrentApplicationConfiguration() {
- if (getDefault() != null) {
- return getDefault().getApplicationConfiguration();
- }
- return null;
- }
-
- /*
- * CONVERSATIONS
- */
-
- /**
- * Creates a new conversation, binds resources to the conversation and start
- * a transaction for this conversation.
- *
- * @return a {@link eu.etaxonomy.cdm.api.conversation.ConversationHolder}
- * object.
- */
- public static ConversationHolder createConversation() {
- ConversationHolder conversation = getCurrentApplicationConfiguration()
- .NewConversation();
- try{
- conversation.startTransaction();
- }catch(Exception e){
- MessagingUtils.messageDialog("No database connection", CdmStore.class, "No database connection available", e);
- }
- return conversation;
- }
-
- /**
- * Generic method that will scan the getters of {@link ICdmApplicationConfiguration} for the given service
- * interface. If a matching getter is found the according service implementation is returned by
- * invoking the getter otherwise the method returns <code>null</code>.
- *
- * @param <T>
- * @param serviceClass
- * @return the configured implementation of <code>serviceClass</code> or <code>null</code>
- */
- public static <T extends IService> T getService(Class<T> serviceClass) {
- ICdmApplicationConfiguration configuration = getCurrentApplicationConfiguration();
-
- Method[] methods = ICdmApplicationConfiguration.class.getDeclaredMethods();
-
- T service = null;
-
- for (Method method : methods) {
- Type type = method.getGenericReturnType();
-
- if (type.equals(serviceClass)) {
- try {
- service = (T) method.invoke(configuration, null);
- break;
- } catch (IllegalArgumentException e) {
- MessagingUtils.error(CdmStore.class, e);
- } catch (IllegalAccessException e) {
- MessagingUtils.error(CdmStore.class, e);
- } catch (InvocationTargetException e) {
- MessagingUtils.error(CdmStore.class, e);
- }
- }
- }
-
- return service;
- }
-
- /**
- * @see #getService(Class)
- * As ICommonService is not extending IService we need a specific request here
- */
- public static ICommonService getCommonService() {
- ICdmApplicationConfiguration configuration = getCurrentApplicationConfiguration();
-
- return configuration.getCommonService();
-
- }
-
- /**
- * <p>
- * getAuthenticationManager
- * </p>
- *
- * @return a
- * {@link org.springframework.security.authentication.ProviderManager}
- * object.
- */
- public static ProviderManager getAuthenticationManager() {
- return getCurrentApplicationConfiguration().getAuthenticationManager();
- }
-
- /**
- * <p>
- * getAuthenticationManager
- * </p>
- *
- * @return a
- * {@link ICdmPermissionEvaluator} object.
- */
- public static ICdmPermissionEvaluator getPermissionEvaluator() {
- return getCurrentApplicationConfiguration().getPermissionEvaluator();
- }
-
- /**
- * <p>
- * getGeoService
- * </p>
- *
- * @return a {@link eu.etaxonomy.cdm.ext.geo.IEditGeoService} object.
- */
- public static IEditGeoService getGeoService() {
- return (IEditGeoService) getCurrentApplicationConfiguration().getBean(
- "editGeoService");
- }
-
- /*
- * SECURITY RELATED CONVENIENCE METHODS
- */
-
- /**
- * @see org.springframework.security.access.PermissionEvaluator#hasPermission(org.springframework.security.core.Authentication, java.lang.Object, java.lang.Object)
+ private static final Resource DEFAULT_APPLICATION_CONTEXT = new ClassPathResource(
+ "/eu/etaxonomy/cdm/editorApplicationContext.xml",
+ TaxeditorStorePlugin.class);
+ private static final DbSchemaValidation DEFAULT_DB_SCHEMA_VALIDATION = DbSchemaValidation.VALIDATE;
+
+ private static CdmStore instance;
+
+ //private final ICdmApplicationConfiguration applicationConfiguration;
+
+ private static ContextManager contextManager = new ContextManager();
+
+ private static LoginManager loginManager = new LoginManager();
+
+ private static TermManager termManager = new TermManager();
+
+ private static SearchManager searchManager = new SearchManager();
+
+ private static EditorManager editorManager = new EditorManager();
+
+ private static UseObjectStore useObjectInitializer = new UseObjectStore();
+
+ private static CdmStoreConnector job;
+
+ private Language language;
+
+ private ICdmSource cdmSource;
+
+ private boolean isConnected;
+
+
+
+ /**
+ * <p>
+ * getDefault
+ * </p>
+ *
+ * @return a {@link eu.etaxonomy.taxeditor.store.CdmStore} object.
+ */
+ protected static CdmStore getDefault() {
+ if (instance != null && instance.isConnected) {
+ return instance;
+ } else{// if (instance == null || !instance.isConnected) {
+
+ MessagingUtils.noDataSourceWarningDialog(instance);
+
+ AbstractUtility.showView(CdmDataSourceViewPart.ID);
+ return null;
+ }
+ }
+
+ /**
+ * Initialize the with the last edited datasource
+ */
+ public static void connect() {
+
+ ICdmSource cdmSource;
+ try {
+
+ cdmSource = CdmDataSourceRepository.getCurrentCdmSource();
+ connect(cdmSource);
+ } catch (Exception e) {
+ MessagingUtils.messageDialog("Connection to CDM Source Failed", CdmStore.class, "Could not connect to target CDM Source", e);
+ }
+
+
+ }
+
+ /**
+ * Initialize with a specific datasource
+ *
+ * @param datasource
+ * a {@link eu.etaxonomy.cdm.database.ICdmDataSource} object.
+ */
+ public static void connect(ICdmSource cdmSource) {
+ connect(cdmSource, DEFAULT_DB_SCHEMA_VALIDATION,
+ DEFAULT_APPLICATION_CONTEXT);
+ }
+
+ public static void connect(ICdmSource cdmSource, RemotingLoginDialog loginDialog) {
+ connect(cdmSource,
+ DEFAULT_DB_SCHEMA_VALIDATION,
+ DEFAULT_APPLICATION_CONTEXT,
+ loginDialog);
+ }
+
+ /**
+ * Initialize and provide
+ *
+ * @param datasource
+ * @param dbSchemaValidation
+ * @param applicationContextBean
+ */
+ private static void connect(final ICdmSource cdmSource,
+ final DbSchemaValidation dbSchemaValidation,
+ final Resource applicationContextBean) {
+
+ MessagingUtils.info("Connecting to datasource: " + cdmSource);
+
+ job = new CdmStoreConnector(Display.getDefault(), cdmSource,
+ dbSchemaValidation, applicationContextBean);
+ job.setUser(true);
+ job.setPriority(Job.BUILD);
+ job.schedule();
+
+ }
+
+ private static void connect(final ICdmSource cdmSource,
+ final DbSchemaValidation dbSchemaValidation,
+ final Resource applicationContextBean,
+ RemotingLoginDialog remotingLoginDialog) {
+ RemotingLoginDialog loginDialog = remotingLoginDialog;
+ if(isActive()) {
+ // before we connect we clear the entity caches and the sessions
+ CdmRemoteCacheManager.removeEntityCaches();
+ if(getCurrentSessionManager() != null) {
+ getCurrentSessionManager().disposeAll();
+ }
+ }
+ MessagingUtils.info("Connecting to datasource: " + cdmSource);
+
+ job = new CdmStoreConnector(Display.getDefault(),
+ cdmSource,
+ dbSchemaValidation,
+ applicationContextBean);
+ job.start(loginDialog);
+
+ }
+
+ public static boolean isConnecting() {
+ return job != null && job.getState() == Job.RUNNING;
+ }
+
+ /**
+ * Closes the current application context
+ *
+ * @param monitor
+ * a {@link org.eclipse.core.runtime.IProgressMonitor} object.
+ */
+ public static void close(final IProgressMonitor monitor) {
+ Display.getDefault().asyncExec(new Runnable() {
+ /*
+ * (non-Javadoc)
+ *
+ * @see java.lang.Runnable#run()
+ */
+ @Override
+ public void run() {
+ getContextManager().notifyContextAboutToStop(monitor);
+ if ((monitor == null || (!monitor.isCanceled()) && isActive())) {
+ getContextManager().notifyContextStop(monitor);
+ instance.close();
+ }
+ }
+ });
+ }
+
+ public static void close(IProgressMonitor monitor, boolean async) {
+ if(async) {
+ close(monitor);
+ } else {
+ getContextManager().notifyContextAboutToStop(monitor);
+ if ((monitor == null || (!monitor.isCanceled()) && isActive())) {
+ getContextManager().notifyContextStop(monitor);
+ instance.close();
+ }
+ }
+
+ }
+ private void close() {
+ isConnected = false;
+ cdmSource = null;
+ CdmApplicationState.dispose();
+ }
+
+ static void setInstance(ICdmApplicationConfiguration applicationController,
+ ICdmSource cdmSource) {
+ instance = new CdmStore(applicationController, cdmSource);
+ if(getCurrentSessionManager().isRemoting()) {
+ CdmApplicationState.setCdmServiceCacher(new CdmServiceCacher());
+ }
+ }
+
+ private CdmStore(ICdmApplicationConfiguration applicationController,
+ ICdmSource cdmSource) {
+ CdmApplicationState.setCurrentAppConfig(applicationController);
+ CdmApplicationState.setCurrentDataChangeService(new CdmUIDataChangeService());
+ this.cdmSource = cdmSource;
+ isConnected = true;
+ }
+
+ /**
+ * All calls to the datastore require
+ *
+ * @return
+ */
+ private ICdmApplicationConfiguration getApplicationConfiguration() {
+ try {
+ return CdmApplicationState.getCurrentAppConfig();
+ } catch (Exception e) {
+ MessagingUtils.error(CdmStore.class, e);
+ }
+ return null;
+ }
+
+ /**
+ * <p>
+ * getCurrentApplicationController
+ * </p>
+ *
+ * @return a
+ * {@link eu.etaxonomy.cdm.remote.api.application.CdmApplicationController}
+ * object.
+ */
+ public static ICdmApplicationConfiguration getCurrentApplicationConfiguration() {
+ if (getDefault() != null) {
+ return getDefault().getApplicationConfiguration();
+ }
+ return null;
+ }
+
+ /*
+ * CONVERSATIONS
+ */
+
+ /**
+ * Creates a new conversation, binds resources to the conversation and start
+ * a transaction for this conversation.
+ *
+ * @return a {@link eu.etaxonomy.cdm.api.conversation.ConversationHolder}
+ * object.
+ */
+ public static ConversationHolder createConversation() {
+ ConversationHolder conversation = getCurrentApplicationConfiguration()
+ .NewConversation();
+ try {
+ conversation.startTransaction();
+ }catch(Exception e){
+ MessagingUtils.messageDialog("No database connection", CdmStore.class, "No database connection available", e);
+ }
+ return conversation;
+ }
+
+ //FIXME:Remoting should be removed after moving completely to remoting
+ private MockCdmEntitySessionManager mockCdmEntitySessionManager;
+
+ private ICdmEntitySessionManager getSessionManager() {
+ //FIXME:Remoting we should only have CdmApplicationRemoteConfiguration after move to remoting
+ // bad hack which should be finally removed
+ if(getCurrentApplicationConfiguration() instanceof CdmApplicationRemoteController) {
+ return ((CdmApplicationRemoteController)getCurrentApplicationConfiguration()).getCdmEntitySessionManager();
+ } else {
+ if(mockCdmEntitySessionManager == null) {
+ mockCdmEntitySessionManager = new MockCdmEntitySessionManager();
+ }
+ return mockCdmEntitySessionManager;
+ }
+ }
+
+ public static ICdmEntitySessionManager getCurrentSessionManager() {
+ if (getDefault() != null) {
+ return getDefault().getSessionManager();
+ }
+ return null;
+
+ }
+
+ /**
+ * Generic method that will scan the getters of {@link ICdmApplicationConfiguration} for the given service
+ * interface. If a matching getter is found the according service implementation is returned by
+ * invoking the getter otherwise the method returns <code>null</code>.
+ *
+ * @param <T>
+ * @param serviceClass
+ * @return the configured implementation of <code>serviceClass</code> or <code>null</code>
+ */
+ public static <T extends IService> T getService(Class<T> serviceClass) {
+ T service = null;
+ try {
+ service = CdmApplicationState.getService(serviceClass);
+ } catch (CdmApplicationException cae) {
+ MessagingUtils.error(CdmStore.class, cae);
+ }
+
+ return service;
+ }
+
+ /**
+ * @see #getService(Class)
+ * As ICommonService is not extending IService we need a specific request here
+ */
+ public static ICommonService getCommonService() {
+ return CdmApplicationState.getCommonService();
+
+ }
+
+ /**
+ * <p>
+ * getAuthenticationManager
+ * </p>
+ *
+ * @return a
+ * {@link org.springframework.security.authentication.ProviderManager}
+ * object.
+ */
+ public static AuthenticationManager getAuthenticationManager() {
+ return getCurrentApplicationConfiguration().getAuthenticationManager();
+ }
+
+ /**
+ * <p>
+ * getAuthenticationManager
+ * </p>
*
- * @param targetDomainObject
- * @param permission
- * @return
- */
- public static boolean currentAuthentiationHasPermission(CdmBase targetDomainObject, EnumSet<CRUD> permission){
- //TODO use getCurrentApplicationConfiguration().currentAuthentiationHasPermission(CdmBase targetDomainObject, Operation permission) instead
- SecurityContext context = SecurityContextHolder.getContext();
- PermissionEvaluator pe = getPermissionEvaluator();
- boolean hasPermission = false;
- try {
+ * @return a
+ * {@link ICdmPermissionEvaluator} object.
+ */
+ public static ICdmPermissionEvaluator getPermissionEvaluator() {
+ return getCurrentApplicationConfiguration().getPermissionEvaluator();
+ }
+
+
+ /*
+ * SECURITY RELATED CONVENIENCE METHODS
+ */
+
+ /**
+ * @see org.springframework.security.access.PermissionEvaluator#hasPermission(org.springframework.security.core.Authentication, java.lang.Object, java.lang.Object)
+ *
+ * @param targetDomainObject
+ * @param permission
+ * @return
+ */
+ public static boolean currentAuthentiationHasPermission(CdmBase targetDomainObject, EnumSet<CRUD> permission){
+ //TODO use getCurrentApplicationConfiguration().currentAuthentiationHasPermission(CdmBase targetDomainObject, Operation permission) instead
+ SecurityContext context = SecurityContextHolder.getContext();
+ PermissionEvaluator pe = getPermissionEvaluator();
+ boolean hasPermission = false;
+ try {
hasPermission = getPermissionEvaluator().hasPermission(context.getAuthentication(), targetDomainObject,
permission);
} catch (org.springframework.security.access.AccessDeniedException e) {
/* IGNORE */
}
return hasPermission;
- }
+ }
- /**
- * @see org.springframework.security.access.PermissionEvaluator#hasPermission(org.springframework.security.core.Authentication, java.lang.Object, java.lang.Object)
+ /**
+ * @see org.springframework.security.access.PermissionEvaluator#hasPermission(org.springframework.security.core.Authentication, java.lang.Object, java.lang.Object)
*
- * @param targetDomainObject
- * @param permission
- * @return
- */
- public static boolean currentAuthentiationHasPermission(Class<? extends CdmBase> targetType, EnumSet<CRUD> permission){
- boolean hasPermission = false;
+ * @param targetDomainObject
+ * @param permission
+ * @return
+ */
+ public static boolean currentAuthentiationHasPermission(Class<? extends CdmBase> targetType, EnumSet<CRUD> permission){
+ boolean hasPermission = false;
try {
hasPermission = getPermissionEvaluator().hasPermission(getCurrentAuthentiation(), null, targetType.getName(), permission);
} catch (org.springframework.security.access.AccessDeniedException e) {
/* IGNORE */
}
return hasPermission;
- }
+ }
- public static boolean currentAuthentiationHasOneOfRoles(Role ... roles){
- boolean hasPermission = false;
+ public static boolean currentAuthentiationHasOneOfRoles(Role ... roles){
+ boolean hasPermission = false;
try {
hasPermission = getPermissionEvaluator().hasOneOfRoles(getCurrentAuthentiation(), roles);
} catch (org.springframework.security.access.AccessDeniedException e) {
/* IGNORE */
}
return hasPermission;
- }
-
- public static Authentication getCurrentAuthentiation() {
- SecurityContext context = SecurityContextHolder.getContext();
- return context.getAuthentication();
- }
-
- /*
- * LANGUAGE
- */
-
- /**
- * Provides access to the global default language set in the application preferences.
- *
- * @return a {@link eu.etaxonomy.cdm.model.common.Language} object.
- */
- public static Language getDefaultLanguage() {
- if (getDefault().getLanguage() == null) {
- getDefault().setLanguage(PreferencesUtil.getGlobalLanguage());
- }
- return getDefault().getLanguage();
- }
-
- /**
- * setDefaultLanguage
- * </p>
- *
- * @param language
- * a {@link eu.etaxonomy.cdm.model.common.Language} object.
- */
- public static void setDefaultLanguage(Language language) {
- getDefault().setLanguage(language);
- }
-
- /**
- * @return the language
- */
- private Language getLanguage() {
- return language;
- }
-
- /**
- * @param language
- * the language to set
- */
- private void setLanguage(Language language) {
- this.language = language;
- }
-
- /*
- * LOGIN
- */
-
- /**
- * Getter for the field <code>loginManager</code>.
- * </p>
- *
- * @return a {@link eu.etaxonomy.taxeditor.store.LoginManager} object.
- */
- public static LoginManager getLoginManager() {
- return loginManager;
- }
-
- /**
- * Getter for the field <code>contextManager</code>.
- * </p>
- *
- * @return a {@link eu.etaxonomy.taxeditor.store.ContextManager} object.
- */
- public static ContextManager getContextManager() {
- return contextManager;
- }
-
- public static TermManager getTermManager() {
- return termManager;
- }
-
- public static SearchManager getSearchManager() {
- return searchManager;
- }
-
- public static EditorManager getEditorManager() {
- return editorManager;
- }
-
- /*
- * IMPORT/EXPORT FACTORIES
- */
-
- /**
- * Getter for the field <code>importHandler</code>.
- * </p>
- *
- * @return a {@link eu.etaxonomy.taxeditor.io.ImportManager} object.
- */
- public static ImportManager getImportManager() {
- return ImportManager.NewInstance(getCurrentApplicationConfiguration());
- }
-
- /**
- * Getter for the field <code>exportHandler</code>.
- * </p>
- *
- * @return a {@link eu.etaxonomy.taxeditor.io.ExportManager} object.
- */
- public static ExportManager getExportManager() {
- return ExportManager.NewInstance(getCurrentApplicationConfiguration());
- }
-
- /**
- * Whether this CdmStore is currently connected to a datasource
- *
- * @return a boolean.
- */
- public static boolean isActive() {
- return instance != null && instance.isConnected;
- }
-
- public static ICdmSource getActiveCdmSource() {
- if (isActive()) {
- return instance.getCdmSource();
- }
- return null;
- }
-
- /**
- * getDataSource
- * </p>
- *
- * @return a {@link eu.etaxonomy.cdm.database.ICdmDataSource} object.
- * @deprecated currently retained for backward compatibility - use {@link getActiveCdmSource()} instead
- */
-// public static ICdmDataSource getDataSource() {
-// if (isActive()) {
-// return (ICdmDataSource)instance.getCdmSource();
-// }
-// return null;
-// }
-
- /**
- * @return
- */
- private ICdmSource getCdmSource() {
- return cdmSource;
- }
+ }
+
+ public static Authentication getCurrentAuthentiation() {
+ SecurityContext context = SecurityContextHolder.getContext();
+ return context.getAuthentication();
+ }
+
+ /*
+ * LANGUAGE
+ */
+
+ /**
+ * Provides access to the global default language set in the application preferences.
+ *
+ * @return a {@link eu.etaxonomy.cdm.model.common.Language} object.
+ */
+ public static Language getDefaultLanguage() {
+ if (getDefault().getLanguage() == null) {
+ getDefault().setLanguage(PreferencesUtil.getGlobalLanguage());
+ }
+ return getDefault().getLanguage();
+ }
+
+ /**
+ * <p>
+ * setDefaultLanguage
+ * </p>
+ *
+ * @param language
+ * a {@link eu.etaxonomy.cdm.model.common.Language} object.
+ */
+ public static void setDefaultLanguage(Language language) {
+ getDefault().setLanguage(language);
+ }
+
+ /**
+ * @return the language
+ */
+ private Language getLanguage() {
+ return language;
+ }
+
+ /**
+ * @param language
+ * the language to set
+ */
+ private void setLanguage(Language language) {
+ this.language = language;
+ }
+
+ /*
+ * LOGIN
+ */
+
+ /**
+ * <p>
+ * Getter for the field <code>loginManager</code>.
+ * </p>
+ *
+ * @return a {@link eu.etaxonomy.taxeditor.store.LoginManager} object.
+ */
+ public static LoginManager getLoginManager() {
+ return loginManager;
+ }
+
+ /**
+ * <p>
+ * Getter for the field <code>contextManager</code>.
+ * </p>
+ *
+ * @return a {@link eu.etaxonomy.taxeditor.store.ContextManager} object.
+ */
+ public static ContextManager getContextManager() {
+ return contextManager;
+ }
+
+ public static TermManager getTermManager() {
+ return termManager;
+ }
+
+ public static SearchManager getSearchManager() {
+ return searchManager;
+ }
+
+ public static EditorManager getEditorManager() {
+ return editorManager;
+ }
+
+ /*
+ * IMPORT/EXPORT FACTORIES
+ */
+
+ /**
+ * <p>
+ * Getter for the field <code>importHandler</code>.
+ * </p>
+ *
+ * @return a {@link eu.etaxonomy.taxeditor.io.ImportManager} object.
+ */
+ public static ImportManager getImportManager() {
+ return ImportManager.NewInstance(getCurrentApplicationConfiguration());
+ }
+
+ /**
+ * <p>
+ * Getter for the field <code>exportHandler</code>.
+ * </p>
+ *
+ * @return a {@link eu.etaxonomy.taxeditor.io.ExportManager} object.
+ */
+ public static ExportManager getExportManager() {
+ return ExportManager.NewInstance(getCurrentApplicationConfiguration());
+ }
+
+ /**
+ * Whether this CdmStore is currently connected to a datasource
+ *
+ * @return a boolean.
+ */
+ public static boolean isActive() {
+ return instance != null && instance.isConnected;
+ }
+
+ public static ICdmSource getActiveCdmSource() {
+ if (isActive()) {
+ return instance.getCdmSource();
+ }
+ return null;
+ }
+
+ /**
+ * <p>
+ * getDataSource
+ * </p>
+ *
+ * @return a {@link eu.etaxonomy.cdm.database.ICdmDataSource} object.
+ * @deprecated currently retained for backward compatibility - use {@link getActiveCdmSource()} instead
+ */
+ // public static ICdmDataSource getDataSource() {
+ // if (isActive()) {
+ // return (ICdmDataSource)instance.getCdmSource();
+ // }
+ // return null;
+ // }
+
+ /**
+ * @return
+ */
+ private ICdmSource getCdmSource() {
+ return cdmSource;
+ }
}
package eu.etaxonomy.taxeditor.store;
+import java.lang.reflect.InvocationTargetException;
import java.sql.SQLException;
import java.util.concurrent.CancellationException;
import org.eclipse.core.runtime.IStatus;
import org.eclipse.core.runtime.Status;
import org.eclipse.core.runtime.jobs.Job;
+import org.eclipse.jface.dialogs.ProgressMonitorDialog;
+import org.eclipse.jface.operation.IRunnableWithProgress;
import org.eclipse.swt.widgets.Display;
import org.springframework.core.io.Resource;
import eu.etaxonomy.cdm.database.DbSchemaValidation;
import eu.etaxonomy.cdm.database.ICdmDataSource;
import eu.etaxonomy.cdm.model.metadata.CdmMetaData;
-import eu.etaxonomy.cdm.remote.ICdmRemoteSource;
+import eu.etaxonomy.cdm.model.name.Rank;
import eu.etaxonomy.taxeditor.model.CdmProgressMonitorAdapter;
import eu.etaxonomy.taxeditor.model.MessagingUtils;
+import eu.etaxonomy.taxeditor.remoting.source.ICdmRemoteSource;
import eu.etaxonomy.taxeditor.ui.dialog.LoginDialog;
+import eu.etaxonomy.taxeditor.ui.dialog.RemotingLoginDialog;
import eu.etaxonomy.taxeditor.view.datasource.CdmDataSourceViewPart;
+
/**
* @author n.hoffmann
* @created Dec 8, 2010
* @version 1.0
*/
class CdmStoreConnector extends Job {
- private final Display display;
- private final ICdmSource cdmSource;
- private DbSchemaValidation dbSchemaValidation;
- private final Resource applicationContextBean;
-
- /**
- * @param datasource
- * @param dbSchemaValidation
- * @param applicationContextBean
- */
- public CdmStoreConnector(Display display, ICdmSource cdmSource,
- DbSchemaValidation dbSchemaValidation,
- Resource applicationContextBean) {
- super("Connecting to datasource: " + cdmSource);
- this.display = display;
- this.cdmSource = cdmSource;
- this.dbSchemaValidation = dbSchemaValidation;
- this.applicationContextBean = applicationContextBean;
- }
-
- @Override
- public IStatus run(final IProgressMonitor monitor) {
-
- monitor.beginTask(getConnectionMessage(), 10);
-
- // check if database is up and running
- checkDatabaseReachable(monitor);
-
- if (!monitor.isCanceled()) {
- // check if the datasource actually holds data
- checkIsNonEmptyCdmDatabase(monitor);
- }
-
- if (dbSchemaValidation != DbSchemaValidation.CREATE
- && !monitor.isCanceled()) {
- // if we do not create the datasource, we want to check if the
- // datasource is compatible with this editor
- checkDbSchemaVersionCompatibility(monitor);
- }
-
- // we are done with our low level checking and will free resources now
- cdmSource.closeOpenConnections();
-
- if (!monitor.isCanceled()) {
- CdmStore.close(monitor);
- }
-
- ICdmApplicationConfiguration applicationController = null;
-
- if (!monitor.isCanceled()) {
- CdmProgressMonitorAdapter subprogressMonitor = CdmProgressMonitorAdapter
- .CreateSubMonitor(monitor, 7);
- // This is where we instantiate the application controller
- int oldPriority = Thread.currentThread().getPriority();
- try {
- Thread.currentThread().setPriority(10);
- applicationController = getApplicationController(cdmSource,subprogressMonitor);
- } catch (Exception e) {
- if(! causeIsCancelationExceptionRecursive(e)){
- return new Status(IStatus.ERROR, "Could not connect to CDM Store", "An error occurred while trying to connect to datasource: " + cdmSource.getName(), e);
- }
- } finally {
- monitor.done();
- Thread.currentThread().setPriority(oldPriority);
- }
- }
-
-
-
- if (!monitor.isCanceled()) {
- CdmStore.setInstance(applicationController, cdmSource);
-
- display.asyncExec(new Runnable() {
- /*
- * (non-Javadoc)
- *
- * @see java.lang.Runnable#run()
- */
- @Override
- public void run() {
- authenticate();
-
- startContext();
- }
- });
-
- MessagingUtils.info("Application context initialized.");
- return Status.OK_STATUS;
- } else {
- // Show datasource view if not shown yet
- display.asyncExec(new Runnable() {
- /*
- * (non-Javadoc)
- *
- * @see java.lang.Runnable#run()
- */
- @Override
- public void run() {
- StoreUtil.showView(CdmDataSourceViewPart.ID);
- }
- });
- return Status.CANCEL_STATUS;
- }
-
- }
-
- private ICdmApplicationConfiguration getApplicationController(ICdmSource cdmSource, CdmProgressMonitorAdapter subprogressMonitor) {
- if(cdmSource instanceof ICdmDataSource) {
- return CdmApplicationController.NewInstance(applicationContextBean,
- (ICdmDataSource)cdmSource,
- dbSchemaValidation,
- false,
- subprogressMonitor);
- } else if(cdmSource instanceof ICdmRemoteSource) {
- return CdmApplicationRemoteController.NewInstance((ICdmRemoteSource)cdmSource,
- false,
- subprogressMonitor,
- null);
- } else {
- throw new UnsupportedOperationException("Cannot create application controller for " + cdmSource.getName());
- }
- }
- private void authenticate() {
- LoginDialog loginDialog = new LoginDialog(StoreUtil.getShell());
- loginDialog.open();
- }
-
- private void startContext() {
- CdmStore.getContextManager().notifyContextStart();
- }
-
- /**
- * @return
- */
- private String getConnectionMessage() {
- return cdmSource.getConnectionMessage();
- }
-
- /**
- * @return
- * @throws SQLException
- */
- private void checkDbSchemaVersionCompatibility(IProgressMonitor monitor) {
- monitor.subTask("Checking if datasource is compatible with this editor.");
- String dbSchemaVersion;
-
- String message = null;
- try {
- dbSchemaVersion = cdmSource.getDbSchemaVersion();
- // we assume that empty dbSchemaVersion means an empty database and
- // skip version checking
-
- if(dbSchemaVersion != null) {
- int compareVersion = CdmMetaData.compareVersion(dbSchemaVersion, CdmMetaData.getDbSchemaVersion(), 3, null);
- // if the datasource version is greater than the taxeditor compatible version then the taxeditor needs to
- // be updated else the datasource needs to be updated
- if(compareVersion > 0) {
- message = "Please update the Taxonomic Editor (Help->Check for Updates) or choose a compatible datasource";
- } else if (compareVersion < 0) {
- message = "Please update the chosen datasource or choose a new data source to connect to in the Datasource View.";
- }
- }
- monitor.worked(1);
- } catch (CdmSourceException e) {
- //
- }
-
- if (message != null) {
- // Show an error message
- MessagingUtils
- .messageDialog(
- "Datasource Compatibility Check failed",
- this,
- "The database schema for the chosen "
- + "datasource '"
- + cdmSource
- + "' \n is not compatible for this version of the taxonomic editor. \n\n"
- + message,
- null);
-
- monitor.setCanceled(true);
- }
-
- }
-
- private void checkIsNonEmptyCdmDatabase(IProgressMonitor monitor) {
- monitor.subTask("Checking if datasource is a non empty CDM database.");
- boolean isDbEmpty = false;
- try {
- isDbEmpty = cdmSource.isDbEmpty();
- } catch (CdmSourceException e) {
- isDbEmpty = true;
- }
- if(isDbEmpty) {
- dbSchemaValidation = DbSchemaValidation.CREATE;
- }
- }
-
- private boolean causeIsCancelationExceptionRecursive(Throwable throwable){
- if(throwable == null){
- return false;
- }else if(throwable instanceof CancellationException){
- return true;
- }else{
- return causeIsCancelationExceptionRecursive(throwable.getCause());
- }
- }
-
- private void checkDatabaseReachable(IProgressMonitor monitor) {
- try {
- monitor.subTask("Checking if datasource is reachable.");
- cdmSource.checkConnection();
- monitor.worked(1);
- } catch (CdmSourceException e) {
- MessagingUtils.messageDialog("Could not connect to chosen datasource",
- this, "Reason: " + e.getMessage(), e);
- monitor.setCanceled(true);
- }
- }
+ private final Display display;
+ private final ICdmSource cdmSource;
+ private DbSchemaValidation dbSchemaValidation;
+ private final Resource applicationContextBean;
+
+
+ /**
+ * @param datasource
+ * @param dbSchemaValidation
+ * @param applicationContextBean
+ */
+ public CdmStoreConnector(Display display,
+ ICdmSource cdmSource,
+ DbSchemaValidation dbSchemaValidation,
+ Resource applicationContextBean) {
+ super("Connecting to datasource: " + cdmSource);
+ this.display = display;
+ this.cdmSource = cdmSource;
+ this.dbSchemaValidation = dbSchemaValidation;
+ this.applicationContextBean = applicationContextBean;
+ }
+
+
+
+ @Override
+ public IStatus run(final IProgressMonitor monitor) {
+
+ monitor.beginTask(getConnectionMessage(), 10);
+
+ // check if database is up and running
+ checkDatabaseReachable(monitor);
+
+ if (!monitor.isCanceled()) {
+ // check if the datasource actually holds data
+ checkIsNonEmptyCdmDatabase(monitor);
+ }
+
+ if (dbSchemaValidation != DbSchemaValidation.CREATE
+ && !monitor.isCanceled()) {
+ // if we do not create the datasource, we want to check if the
+ // datasource is compatible with this editor
+ checkDbSchemaVersionCompatibility(monitor);
+ }
+
+ // we are done with our low level checking and will free resources now
+ cdmSource.closeOpenConnections();
+
+ if (!monitor.isCanceled()) {
+ CdmStore.close(monitor);
+ }
+
+ ICdmApplicationConfiguration applicationController = null;
+
+ if (!monitor.isCanceled()) {
+ CdmProgressMonitorAdapter subprogressMonitor = CdmProgressMonitorAdapter
+ .CreateSubMonitor(monitor, 7);
+ // This is where we instantiate the application controller
+ int oldPriority = Thread.currentThread().getPriority();
+ try {
+ Thread.currentThread().setPriority(10);
+ applicationController = getApplicationController(cdmSource,subprogressMonitor);
+ } catch (Exception e) {
+ if(! causeIsCancelationExceptionRecursive(e)){
+ return new Status(IStatus.ERROR, "Could not connect to CDM Store", "An error occurred while trying to connect to datasource: " + cdmSource.getName(), e);
+ }
+ } finally {
+ monitor.done();
+ Thread.currentThread().setPriority(oldPriority);
+ }
+ }
+
+
+
+ if (!monitor.isCanceled()) {
+ CdmStore.setInstance(applicationController, cdmSource);
+
+ display.asyncExec(new Runnable() {
+ /*
+ * (non-Javadoc)
+ *
+ * @see java.lang.Runnable#run()
+ */
+ @Override
+ public void run() {
+ authenticate();
+
+ startContext();
+ }
+ });
+
+ MessagingUtils.info("Application context initialized.");
+ return Status.OK_STATUS;
+ } else {
+ // Show datasource view if not shown yet
+ display.asyncExec(new Runnable() {
+ /*
+ * (non-Javadoc)
+ *
+ * @see java.lang.Runnable#run()
+ */
+ @Override
+ public void run() {
+ StoreUtil.showView(CdmDataSourceViewPart.ID);
+ }
+ });
+ return Status.CANCEL_STATUS;
+ }
+
+ }
+
+ public void start(final RemotingLoginDialog loginDialog) {
+ // hide login dialog and start connection dialog
+ loginDialog.setMessage(null);
+ loginDialog.hide(true);
+
+
+ ProgressMonitorDialog dialog = new ProgressMonitorDialog(StoreUtil.getShell());
+
+ try {
+ dialog.run(true, true, new IRunnableWithProgress() {
+ @Override
+ public void run(final IProgressMonitor monitor) {
+ try {
+ monitor.beginTask(getConnectionMessage(), 7);
+
+ // check if database is up and running
+ checkDatabaseReachable(monitor);
+
+ // check if the datasource actually holds data
+ checkIsNonEmptyCdmDatabase(monitor);
+
+ if (dbSchemaValidation != DbSchemaValidation.CREATE) {
+ // if we do not create the datasource, we want to check if the
+ // datasource is compatible with this editor
+ checkDbSchemaVersionCompatibility(monitor);
+ }
+
+ // we are done with our low level checking and will free resources now
+ cdmSource.closeOpenConnections();
+
+ display.syncExec(new Runnable() {
+ /*
+ * (non-Javadoc)
+ *
+ * @see java.lang.Runnable#run()
+ */
+ @Override
+ public void run() {
+ // close the current context
+ CdmStore.close(monitor, false);
+ }
+ });
+
+ ICdmApplicationConfiguration applicationController = null;
+
+ if (!monitor.isCanceled()) {
+ CdmProgressMonitorAdapter subprogressMonitor = CdmProgressMonitorAdapter
+ .CreateSubMonitor(monitor, 3);
+ // genrerate new application controller
+ applicationController = getApplicationController(cdmSource,subprogressMonitor);
+ }
+
+
+ if (!monitor.isCanceled()) {
+ CdmStore.setInstance(applicationController, cdmSource);
+ monitor.subTask("Authenticating user");
+ display.syncExec(new Runnable() {
+ /*
+ * (non-Javadoc)
+ *
+ * @see java.lang.Runnable#run()
+ */
+ @Override
+ public void run() {
+
+ try {
+ // create new security context
+ CdmStore.getLoginManager().doAuthenticate(loginDialog.getUsername(), loginDialog.getPassword());
+ loginDialog.onComplete();
+ CdmStore.getContextManager().notifyContextStart();
+ Rank.initDefaultTerms();
+ } catch(CdmAuthenticationException cae) {
+ loginDialog.hide(false);
+ loginDialog.setMessage(cae.getMessage());
+ }
+
+ }
+ });
+ } else {
+ throw new RuntimeException("Login cancelled");
+ }
+ } finally {
+ monitor.done();
+ }
+ }
+ });
+ } catch (InvocationTargetException e) {
+ loginDialog.hide(false);
+ loginDialog.setMessage(e.getMessage());
+ } catch (InterruptedException e) {
+ loginDialog.hide(false);
+ loginDialog.setMessage(e.getMessage());
+ }
+ }
+
+
+ private ICdmApplicationConfiguration getApplicationController(ICdmSource cdmSource, CdmProgressMonitorAdapter subprogressMonitor) {
+ if(cdmSource instanceof ICdmDataSource) {
+ return CdmApplicationController.NewInstance(applicationContextBean,
+ (ICdmDataSource)cdmSource,
+ dbSchemaValidation,
+ false,
+ subprogressMonitor);
+ } else if(cdmSource instanceof ICdmRemoteSource) {
+ return CdmApplicationRemoteController.NewInstance((ICdmRemoteSource)cdmSource,
+ subprogressMonitor,
+ null);
+ } else {
+ throw new UnsupportedOperationException("Cannot create application controller for " + cdmSource.getName());
+ }
+ }
+
+ private void authenticate() {
+ LoginDialog saloginDialog = new LoginDialog(StoreUtil.getShell());
+ saloginDialog.open();
+ }
+
+ private void startContext() {
+ CdmStore.getContextManager().notifyContextStart();
+ }
+
+ /**
+ * @return
+ */
+ private String getConnectionMessage() {
+ return cdmSource.getConnectionMessage();
+ }
+
+ /**
+ * @return
+ * @throws SQLException
+ */
+ private void checkDbSchemaVersionCompatibility(IProgressMonitor monitor) {
+ monitor.subTask("Checking if datasource is compatible with this editor.");
+ String dbSchemaVersion;
+
+ String message = null;
+ try {
+ dbSchemaVersion = cdmSource.getDbSchemaVersion();
+ // we assume that empty dbSchemaVersion means an empty database and
+ // skip version checking
+
+ if(dbSchemaVersion != null) {
+ int compareVersion = CdmMetaData.compareVersion(dbSchemaVersion, CdmMetaData.getDbSchemaVersion(), 3, null);
+ // if the datasource version is greater than the taxeditor compatible version then the taxeditor needs to
+ // be updated else the datasource needs to be updated
+ if(compareVersion > 0) {
+ message = "Please update the Taxonomic Editor (Help->Check for Updates) or choose a compatible datasource";
+ } else if (compareVersion < 0) {
+ message = "Please update the chosen datasource or choose a new data source to connect to in the Datasource View.";
+ }
+ }
+ monitor.worked(1);
+ } catch (CdmSourceException e) {
+ //
+ }
+
+ if (message != null) {
+ // Show an error message
+ MessagingUtils
+ .messageDialog(
+ "Datasource Compatibility Check failed",
+ this,
+ "The database schema for the chosen "
+ + "datasource '"
+ + cdmSource
+ + "' \n is not compatible for this version of the taxonomic editor. \n\n"
+ + message,
+ null);
+
+ monitor.setCanceled(true);
+ }
+
+ }
+
+ private void checkIsNonEmptyCdmDatabase(IProgressMonitor monitor) {
+ monitor.subTask("Checking if datasource is a non empty CDM database.");
+ boolean isDbEmpty = false;
+ try {
+ isDbEmpty = cdmSource.isDbEmpty();
+ } catch (CdmSourceException e) {
+ isDbEmpty = true;
+ }
+ if(isDbEmpty) {
+ dbSchemaValidation = DbSchemaValidation.CREATE;
+ }
+ }
+
+ private boolean causeIsCancelationExceptionRecursive(Throwable throwable){
+ if(throwable == null){
+ return false;
+ }else if(throwable instanceof CancellationException){
+ return true;
+ }else{
+ return causeIsCancelationExceptionRecursive(throwable.getCause());
+ }
+ }
+
+ private void checkDatabaseReachable(IProgressMonitor monitor) {
+ try {
+ monitor.subTask("Checking if datasource is reachable.");
+ cdmSource.checkConnection();
+ monitor.worked(1);
+ } catch (CdmSourceException e) {
+ MessagingUtils.messageDialog("Could not connect to chosen datasource",
+ this, "Reason: " + e.getMessage(), e);
+ monitor.setCanceled(true);
+ }
+ }
+
+
}
--- /dev/null
+// $Id$
+/**
+* Copyright (C) 2015 EDIT
+* European Distributed Institute of Taxonomy
+* http://www.e-taxonomy.eu
+*
+* The contents of this file are subject to the Mozilla Public License Version 1.1
+* See LICENSE.TXT at the top of this package for the full license terms.
+*/
+package eu.etaxonomy.taxeditor.store;
+
+import org.eclipse.swt.widgets.Display;
+
+import eu.etaxonomy.cdm.api.application.CdmChangeEvent;
+import eu.etaxonomy.cdm.api.application.CdmDataChangeService;
+import eu.etaxonomy.cdm.api.application.ICdmChangeListener;
+
+/**
+ * @author cmathew
+ * @date 18 Jun 2015
+ *
+ */
+public class CdmUIDataChangeService extends CdmDataChangeService {
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.store.ICdmDataChangeService#fireChangeEvent(eu.etaxonomy.cdm.api.application.CdmChangeEvent, boolean)
+ */
+ @Override
+ public void fireChangeEvent(final CdmChangeEvent event, boolean async) {
+ for(final ICdmChangeListener listener : listeners) {
+ // Update the user interface asynchronously
+ if(async) {
+ Display.getDefault().asyncExec(new Runnable() {
+ @Override
+ public void run() {
+ listener.onChange(event);
+ }
+ });
+ }
+ // Update the user interface synchronously
+ Display.getDefault().syncExec(new Runnable() {
+ @Override
+ public void run() {
+ listener.onChange(event);
+ }
+ });
+ }
+ }
+
+}
// $Id$
/**
-* Copyright (C) 2007 EDIT
-* European Distributed Institute of Taxonomy
-* http://www.e-taxonomy.eu
-*
-* The contents of this file are subject to the Mozilla Public License Version 1.1
-* See LICENSE.TXT at the top of this package for the full license terms.
-*/
+ * Copyright (C) 2007 EDIT
+ * European Distributed Institute of Taxonomy
+ * http://www.e-taxonomy.eu
+ *
+ * The contents of this file are subject to the Mozilla Public License Version 1.1
+ * See LICENSE.TXT at the top of this package for the full license terms.
+ */
package eu.etaxonomy.taxeditor.store;
import org.eclipse.ui.IWorkbenchListener;
import org.eclipse.ui.PlatformUI;
import org.eclipse.ui.XMLMemento;
+import org.eclipse.ui.internal.Workbench;
import eu.etaxonomy.taxeditor.model.IContextListener;
import eu.etaxonomy.taxeditor.model.MementoHelper;
* @version 1.0
*/
public class ContextManager implements IWorkbenchListener{
-
- private ListenerList contextListeners = new ListenerList();
-
- private IMemento memento;
-
- /**
- * <p>Constructor for ContextManager.</p>
- */
- protected ContextManager() {
- PlatformUI.getWorkbench().addWorkbenchListener(this);
- }
-
- /**
- * <p>addContextListener</p>
- *
- * @param listener a {@link eu.etaxonomy.taxeditor.model.IContextListener} object.
- */
- public void addContextListener(IContextListener listener){
- contextListeners.add(listener);
- }
-
- /**
- * <p>removeContextListener</p>
- *
- * @param listener a {@link eu.etaxonomy.taxeditor.model.IContextListener} object.
- */
- public void removeContextListener(IContextListener listener) {
- contextListeners.remove(listener);
- }
-
- /**
- * <p>notifyContextStart</p>
- */
- public void notifyContextStart() {
- MessagingUtils.info("Notifying context listeners, that the context has started.");
- ProgressMonitorDialog dialog = new ProgressMonitorDialog(StoreUtil.getShell());
-
- try {
- dialog.run(false, false, new IRunnableWithProgress() {
- /* (non-Javadoc)
- * @see org.eclipse.jface.operation.IRunnableWithProgress#run(org.eclipse.core.runtime.IProgressMonitor)
- */
- @Override
- public void run(IProgressMonitor monitor)
- throws InvocationTargetException, InterruptedException {
- monitor.beginTask("Starting context", contextListeners.size());
-
-
- readMemento();
-
- for(final Object listener : contextListeners.getListeners()){
- ((IContextListener) listener).contextStart(memento, monitor);
- monitor.worked(1);
- }
- monitor.done();
- }
- });
- } catch (InvocationTargetException e) {
- MessagingUtils.error(getClass(), e);
- } catch (InterruptedException e) {
- MessagingUtils.error(getClass(), e);
- }
- }
-
-
- /**
- *
- */
- public void notifyContextRefresh() {
- MessagingUtils.info("Notifying context listeners, that the context needs to be refreshed.");
- ProgressMonitorDialog dialog = new ProgressMonitorDialog(StoreUtil.getShell());
-
- try {
- dialog.run(false, false, new IRunnableWithProgress() {
- /* (non-Javadoc)
- * @see org.eclipse.jface.operation.IRunnableWithProgress#run(org.eclipse.core.runtime.IProgressMonitor)
- */
- @Override
- public void run(IProgressMonitor monitor)
- throws InvocationTargetException, InterruptedException {
- monitor.beginTask("Refreshing context", contextListeners.size());
-
- for(final Object listener : contextListeners.getListeners()){
- ((IContextListener) listener).contextRefresh(monitor);
- monitor.worked(1);
- }
- monitor.done();
- }
- });
- } catch (InvocationTargetException e) {
- MessagingUtils.error(getClass(), e);
- } catch (InterruptedException e) {
- MessagingUtils.error(getClass(), e);
- }
- }
-
- /**
- * <p>notifyContextAboutToStop</p>
- *
- * @param monitor a {@link org.eclipse.core.runtime.IProgressMonitor} object.
- */
- public void notifyContextAboutToStop(final IProgressMonitor monitor){
-
- IProgressMonitor subMonitor = StoreUtil.getSubProgressMonitor(monitor, 1);
-
- subMonitor.beginTask("Stoping context", contextListeners.size());
- // we are creating the memento here; even if the context is not stopped
- createMemento();
-
- for(final Object listener : contextListeners.getListeners()){
- ((IContextListener) listener).contextAboutToStop(memento, subMonitor);
- subMonitor.worked(1);
- }
-
- subMonitor.done();
- }
-
- /**
- * <p>notifyContextStop</p>
- *
- * @param monitor a {@link org.eclipse.core.runtime.IProgressMonitor} object.
- */
- public void notifyContextStop(IProgressMonitor monitor) {
-
- IProgressMonitor subMonitor = StoreUtil.getSubProgressMonitor(monitor, 1);
-
- subMonitor.beginTask("Stoping context", contextListeners.size());
- MessagingUtils.info("Notifying context listeners, that the context has stopped.");
-
- for(Object listener : contextListeners.getListeners()){
- ((IContextListener) listener).contextStop(memento, subMonitor);
- subMonitor.worked(1);
- }
-
- saveMemento();
- subMonitor.done();
- }
-
- /* (non-Javadoc)
- * @see org.eclipse.ui.IWorkbenchListener#preShutdown(org.eclipse.ui.IWorkbench, boolean)
- */
- /** {@inheritDoc} */
- @Override
- public boolean preShutdown(IWorkbench workbench, boolean forced) {
-
- createMemento();
-
- IProgressMonitor monitor = null;
-
- for(Object listener : contextListeners.getListeners()){
- ((IContextListener) listener).workbenchShutdown(memento, monitor);
- }
-
- saveMemento();
-
- // return true in any case, otherwise the application will not stop
- return true;
- }
-
- /* (non-Javadoc)
- * @see org.eclipse.ui.IWorkbenchListener#postShutdown(org.eclipse.ui.IWorkbench)
- */
- /** {@inheritDoc} */
- @Override
- public void postShutdown(IWorkbench workbench) {
-
-
- }
-
-
- private void readMemento(){
- try {
- memento = MementoHelper.readMementoFromFile(getStateFileForCurrentDatabase());
- } catch (FileNotFoundException e) {
- // no memento -> no previous state
- MessagingUtils.info("No state file for datasource");
- }
- }
-
- private void createMemento(){
-
- if (CdmStore.getActiveCdmSource() != null) {
-
- try {
- String name = CdmStore.getActiveCdmSource().getName();
- name = name.trim();
- name = name.replace(" ", "_");
- memento = XMLMemento.createWriteRoot(name);
-
- MessagingUtils.info("DataSource found. Memento created.");
- } catch (Exception e) {
- // The memento could not be created, but a not closable editor is avoided for this case.
- MessagingUtils.error(this.getClass(), "The memento could not be created", e);
- }
- } else {
- MessagingUtils.info("Not storing state data, because no DataSource present.");
- }
-
- }
-
- private boolean saveMemento(){
- return MementoHelper.saveMementoToFile(memento, getStateFileForCurrentDatabase()) != null;
- }
-
- /**
- * <p>getStateFileForCurrentDatabase</p>
- *
- * @return a {@link java.io.File} object.
- */
- protected File getStateFileForCurrentDatabase() {
- if(CdmStore.getActiveCdmSource() == null){
- return null;
- }
-
- IPath path = TaxeditorStorePlugin.getDefault().getStateLocation();
- if (path == null) {
- return null;
- }
- path = path.append("editor_state_" + CdmStore.getActiveCdmSource().getName() + ".xml");
- return path.toFile();
- }
+
+ private final ListenerList contextListeners = new ListenerList();
+
+ private IMemento memento;
+
+ /**
+ * <p>Constructor for ContextManager.</p>
+ */
+ protected ContextManager() {
+ if(Workbench.getInstance() != null) {
+ PlatformUI.getWorkbench().addWorkbenchListener(this);
+ }
+ }
+
+ /**
+ * <p>addContextListener</p>
+ *
+ * @param listener a {@link eu.etaxonomy.taxeditor.model.IContextListener} object.
+ */
+ public void addContextListener(IContextListener listener){
+ contextListeners.add(listener);
+ }
+
+ /**
+ * <p>removeContextListener</p>
+ *
+ * @param listener a {@link eu.etaxonomy.taxeditor.model.IContextListener} object.
+ */
+ public void removeContextListener(IContextListener listener) {
+ contextListeners.remove(listener);
+ }
+
+ public void notifyContextStartWithoutDialog(IProgressMonitor monitor) {
+ MessagingUtils.info("Notifying context listeners, that the context has started.");
+
+ readMemento();
+
+ for(final Object listener : contextListeners.getListeners()){
+ ((IContextListener) listener).contextStart(memento, monitor);
+ }
+ }
+ /**
+ * <p>notifyContextStart</p>
+ */
+ public void notifyContextStart() {
+ MessagingUtils.info("Notifying context listeners, that the context has started.");
+ ProgressMonitorDialog dialog = new ProgressMonitorDialog(StoreUtil.getShell());
+
+ try {
+ dialog.run(false, false, new IRunnableWithProgress() {
+ /* (non-Javadoc)
+ * @see org.eclipse.jface.operation.IRunnableWithProgress#run(org.eclipse.core.runtime.IProgressMonitor)
+ */
+ @Override
+ public void run(IProgressMonitor monitor)
+ throws InvocationTargetException, InterruptedException {
+ monitor.beginTask("Starting context", contextListeners.size());
+
+
+ readMemento();
+
+ for(final Object listener : contextListeners.getListeners()){
+ ((IContextListener) listener).contextStart(memento, monitor);
+ monitor.worked(1);
+ }
+ monitor.done();
+ }
+ });
+ } catch (InvocationTargetException e) {
+ MessagingUtils.error(getClass(), e);
+ } catch (InterruptedException e) {
+ MessagingUtils.error(getClass(), e);
+ }
+ }
+
+
+ /**
+ *
+ */
+ public void notifyContextRefresh() {
+ MessagingUtils.info("Notifying context listeners, that the context needs to be refreshed.");
+ ProgressMonitorDialog dialog = new ProgressMonitorDialog(StoreUtil.getShell());
+
+ try {
+ dialog.run(false, false, new IRunnableWithProgress() {
+ /* (non-Javadoc)
+ * @see org.eclipse.jface.operation.IRunnableWithProgress#run(org.eclipse.core.runtime.IProgressMonitor)
+ */
+ @Override
+ public void run(IProgressMonitor monitor)
+ throws InvocationTargetException, InterruptedException {
+ monitor.beginTask("Refreshing context", contextListeners.size());
+
+ for(final Object listener : contextListeners.getListeners()){
+ ((IContextListener) listener).contextRefresh(monitor);
+ monitor.worked(1);
+ }
+ monitor.done();
+ }
+ });
+ } catch (InvocationTargetException e) {
+ MessagingUtils.error(getClass(), e);
+ } catch (InterruptedException e) {
+ MessagingUtils.error(getClass(), e);
+ }
+ }
+
+ /**
+ * <p>notifyContextAboutToStop</p>
+ *
+ * @param monitor a {@link org.eclipse.core.runtime.IProgressMonitor} object.
+ */
+ public void notifyContextAboutToStop(final IProgressMonitor monitor){
+
+ IProgressMonitor subMonitor = StoreUtil.getSubProgressMonitor(monitor, 1);
+
+ subMonitor.beginTask("Stoping context", contextListeners.size());
+ // we are creating the memento here; even if the context is not stopped
+ createMemento();
+
+ for(final Object listener : contextListeners.getListeners()){
+ ((IContextListener) listener).contextAboutToStop(memento, subMonitor);
+ subMonitor.worked(1);
+ }
+
+ subMonitor.done();
+ }
+
+ /**
+ * <p>notifyContextStop</p>
+ *
+ * @param monitor a {@link org.eclipse.core.runtime.IProgressMonitor} object.
+ */
+ public void notifyContextStop(IProgressMonitor monitor) {
+
+ IProgressMonitor subMonitor = StoreUtil.getSubProgressMonitor(monitor, 1);
+
+ subMonitor.beginTask("Stoping context", contextListeners.size());
+ MessagingUtils.info("Notifying context listeners, that the context has stopped.");
+
+ for(Object listener : contextListeners.getListeners()){
+ ((IContextListener) listener).contextStop(memento, subMonitor);
+ subMonitor.worked(1);
+ }
+
+ saveMemento();
+ subMonitor.done();
+ }
+
+ /* (non-Javadoc)
+ * @see org.eclipse.ui.IWorkbenchListener#preShutdown(org.eclipse.ui.IWorkbench, boolean)
+ */
+ /** {@inheritDoc} */
+ @Override
+ public boolean preShutdown(IWorkbench workbench, boolean forced) {
+
+ createMemento();
+
+ IProgressMonitor monitor = null;
+
+ for(Object listener : contextListeners.getListeners()){
+ ((IContextListener) listener).workbenchShutdown(memento, monitor);
+ }
+
+ saveMemento();
+
+ // return true in any case, otherwise the application will not stop
+ return true;
+ }
+
+ /* (non-Javadoc)
+ * @see org.eclipse.ui.IWorkbenchListener#postShutdown(org.eclipse.ui.IWorkbench)
+ */
+ /** {@inheritDoc} */
+ @Override
+ public void postShutdown(IWorkbench workbench) {
+
+
+ }
+
+
+ private void readMemento(){
+ try {
+ memento = MementoHelper.readMementoFromFile(getStateFileForCurrentDatabase());
+ } catch (FileNotFoundException e) {
+ // no memento -> no previous state
+ MessagingUtils.info("No state file for datasource");
+ }
+ }
+
+ private void createMemento(){
+
+ if (CdmStore.getActiveCdmSource() != null) {
+
+ try {
+ String name = CdmStore.getActiveCdmSource().getName();
+ name = name.trim();
+ name = name.replace(" ", "_");
+ memento = XMLMemento.createWriteRoot(name);
+
+ MessagingUtils.info("DataSource found. Memento created.");
+ } catch (Exception e) {
+ // The memento could not be created, but a not closable editor is avoided for this case.
+ MessagingUtils.error(this.getClass(), "The memento could not be created", e);
+ }
+ } else {
+ MessagingUtils.info("Not storing state data, because no DataSource present.");
+ }
+
+ }
+
+ private boolean saveMemento(){
+ return MementoHelper.saveMementoToFile(memento, getStateFileForCurrentDatabase()) != null;
+ }
+
+ /**
+ * <p>getStateFileForCurrentDatabase</p>
+ *
+ * @return a {@link java.io.File} object.
+ */
+ protected File getStateFileForCurrentDatabase() {
+ if(CdmStore.getActiveCdmSource() == null){
+ return null;
+ }
+
+ IPath path = TaxeditorStorePlugin.getDefault().getStateLocation();
+ if (path == null) {
+ return null;
+ }
+ path = path.append("editor_state_" + CdmStore.getActiveCdmSource().getName() + ".xml");
+ return path.toFile();
+ }
}
import org.springframework.security.core.GrantedAuthority;
import org.springframework.security.core.context.SecurityContextHolder;
+import eu.etaxonomy.cdm.api.application.CdmApplicationState;
import eu.etaxonomy.cdm.api.conversation.ConversationHolder;
import eu.etaxonomy.cdm.api.conversation.IConversationEnabled;
import eu.etaxonomy.cdm.model.common.Group;
*/
public boolean authenticate(String username, String password){
- // close all open editors
- if(!AbstractUtility.closeAll()){
- return false;
- }
-
-
- try{
- SecurityContextHolder.clearContext();
-
- Authentication lastAuthentication = CdmStore.getCurrentAuthentiation();
-
- UsernamePasswordAuthenticationToken token = new UsernamePasswordAuthenticationToken(username, password);
- Authentication authentication = CdmStore.getAuthenticationManager().authenticate(token);
+ // close all open editors
+ if(!AbstractUtility.closeAll()){
+ return false;
+ }
- User user = (User) authentication.getPrincipal();
- /* circumventing problem with hibernate not refreshing the transient collection authorities in this case,
- * see http://dev.e-taxonomy.eu/trac/ticket/4053 */
- user.initAuthorities();
- if(logger.isDebugEnabled()){
- StringBuilder gaText = new StringBuilder();
- String indent = " ";
- Set<GrantedAuthority> gaSet = user.getGrantedAuthorities();
- _logGrantedAuthotities(gaText, indent, gaSet);
- for(Group gr : user.getGroups()){
- gaText.append(indent).append("gr[").append(gr.hashCode()).append("] \"").append(gr.getName()).append("\" ").append(gr.toString()).append("\n");
- _logGrantedAuthotities(gaText, indent + indent, gr.getGrantedAuthorities());
- }
- logger.debug("User authenticated: " + user.getUsername() + "\n" + gaText.toString());
- }
+ try{
+ doAuthenticate(username, password);
+ } catch (CdmAuthenticationException e) {
+ MessagingUtils.warningDialog("Could not authenticate", this, e.getMessage());
+ }
+ return true;
+ }
- SecurityContextHolder.getContext().setAuthentication(authentication);
+ public void doAuthenticate(String username, String password) throws CdmAuthenticationException {
+ try {
+ SecurityContextHolder.clearContext();
+ Authentication lastAuthentication = CdmStore.getCurrentAuthentiation();
+
+ UsernamePasswordAuthenticationToken token = new UsernamePasswordAuthenticationToken(username, password);
+ Authentication authentication = CdmStore.getAuthenticationManager().authenticate(token);
+
+ User user = (User) authentication.getPrincipal();
+ /* circumventing problem with hibernate not refreshing the transient collection authorities in this case,
+ * see http://dev.e-taxonomy.eu/trac/ticket/4053 */
+ user.initAuthorities();
+
+ if(logger.isDebugEnabled()){
+ StringBuilder gaText = new StringBuilder();
+ String indent = " ";
+ Set<GrantedAuthority> gaSet = user.getGrantedAuthorities();
+ _logGrantedAuthotities(gaText, indent, gaSet);
+ for(Group gr : user.getGroups()){
+ gaText.append(indent).append("gr[").append(gr.hashCode()).append("] \"").append(gr.getName()).append("\" ").append(gr.toString()).append("\n");
+ _logGrantedAuthotities(gaText, indent + indent, gr.getGrantedAuthorities());
+ }
+ logger.debug("User authenticated: " + user.getUsername() + "\n" + gaText.toString());
+ }
+
+ authentication = new UsernamePasswordAuthenticationToken(user,password, authentication.getAuthorities());
+ SecurityContextHolder.getContext().setAuthentication(authentication);
+ CdmApplicationState.setCurrentSecurityContext(SecurityContextHolder.getContext());
+
+ if(!authentication.equals(lastAuthentication)){
+ this.setChanged();
+ this.notifyObservers();
+ }
+ } catch(BadCredentialsException e){
+ throw new CdmAuthenticationException("Login and/or Password incorrect", e);
+ } catch(LockedException e){
+ throw new CdmAuthenticationException("Account is locked", e);
+ } catch(IllegalArgumentException e){
+ throw new CdmAuthenticationException("Login and/or Password empty", e);
+ }
- if(!authentication.equals(lastAuthentication)){
- this.setChanged();
- this.notifyObservers();
- }
- return true;
- }
- catch(BadCredentialsException e){
- MessagingUtils.warningDialog("Could not authenticate", this, "Could not authenticate. Reason: Bad Credentials.");
- }
- catch(LockedException e){
- MessagingUtils.warningDialog("Could not authenticate", this, "Could not authenticate. Reason: Account is locked.");
- }
- catch(IllegalArgumentException e){
- MessagingUtils.warningDialog("Could not authenticate", this, "Could not authenticate. Reason: Username and/or Password empty.");
- }
- return false;
}
private void _logGrantedAuthotities(StringBuilder gaText, String indent,
* @return a {@link eu.etaxonomy.cdm.model.common.User} object.
*/
public User getAuthenticatedUser(){
- Authentication authentication = SecurityContextHolder.getContext().getAuthentication();
+ Authentication authentication = SecurityContextHolder.getContext().getAuthentication();
if(authentication != null
&& authentication.getPrincipal() != null
configurator.setClazz(DerivedUnit.class);
}
}
+ final List<String> OCCURRENCE_INIT_STRATEGY = Arrays.asList(new String[] {
+ "descriptions",
+ "identifiers",
+ "derivationEvents.originals"
+ });
+ configurator.setPropertyPaths(OCCURRENCE_INIT_STRATEGY);
if(configurator.getClazz().equals(SpecimenOrObservationBase.class)){
//get FieldUnits + DerivedUnits
configurator.setClazz(DerivedUnit.class);
// $Id$
/**
-* Copyright (C) 2007 EDIT
-* European Distributed Institute of Taxonomy
-* http://www.e-taxonomy.eu
-*
-* The contents of this file are subject to the Mozilla Public License Version 1.1
-* See LICENSE.TXT at the top of this package for the full license terms.
-*/
+ * Copyright (C) 2007 EDIT
+ * European Distributed Institute of Taxonomy
+ * http://www.e-taxonomy.eu
+ *
+ * The contents of this file are subject to the Mozilla Public License Version 1.1
+ * See LICENSE.TXT at the top of this package for the full license terms.
+ */
package eu.etaxonomy.taxeditor.ui.bar;
import java.util.Observer;
import org.eclipse.swt.SWT;
-import org.eclipse.swt.layout.GridLayout;
import org.eclipse.swt.widgets.Composite;
import org.eclipse.swt.widgets.Control;
import org.eclipse.swt.widgets.Label;
+import org.eclipse.ui.PlatformUI;
import org.eclipse.ui.menus.WorkbenchWindowControlContribution;
import eu.etaxonomy.cdm.model.common.User;
+import eu.etaxonomy.taxeditor.remoting.source.CdmRemoteSource;
import eu.etaxonomy.taxeditor.store.CdmStore;
+import eu.etaxonomy.taxeditor.util.ApplicationUtil;
/**
* Shows the currently logged in user in status bar
*/
public class AuthenticatedUserBar extends WorkbenchWindowControlContribution implements Observer{
- private Label label_authenticatedUser;
-
- /**
- * <p>Constructor for AuthenticatedUserBar.</p>
- */
- public AuthenticatedUserBar(){
- CdmStore.getLoginManager().addObserver(this);
- }
-
- /* (non-Javadoc)
- * @see org.eclipse.jface.action.ControlContribution#createControl(org.eclipse.swt.widgets.Composite)
- */
- /** {@inheritDoc} */
- @Override
- protected Control createControl(Composite parent) {
- final Composite composite = new Composite(parent, SWT.NONE);
- final GridLayout layout = new GridLayout();
- composite.setLayout(layout);
-
- label_authenticatedUser = new Label(composite, SWT.NULL);
-
- update(null, null);
-
- return composite;
- }
-
- /* (non-Javadoc)
- * @see java.util.Observer#update(java.util.Observable, java.lang.Object)
- */
- /** {@inheritDoc} */
- public void update(Observable o, Object arg) {
- User authenticatedUser = CdmStore.getLoginManager().getAuthenticatedUser();
- // TODO find a method to recompute width for parental toolbar item
- String text = authenticatedUser == null ? "Not logged in " :
- "Logged in as: " + authenticatedUser.getUsername() + " ";
- label_authenticatedUser.setText(text);
- }
-
- /* (non-Javadoc)
- * @see org.eclipse.jface.action.ContributionItem#dispose()
- */
- /** {@inheritDoc} */
- @Override
- public void dispose() {
- super.dispose();
-
- CdmStore.getLoginManager().deleteObserver(this);
- }
-
+ private Label label_authenticatedUser;
+
+ /**
+ * <p>Constructor for AuthenticatedUserBar.</p>
+ */
+ public AuthenticatedUserBar(){
+ CdmStore.getLoginManager().addObserver(this);
+ }
+
+ /* (non-Javadoc)
+ * @see org.eclipse.jface.action.ControlContribution#createControl(org.eclipse.swt.widgets.Composite)
+ */
+ /** {@inheritDoc} */
+ @Override
+ protected Control createControl(Composite parent) {
+
+ label_authenticatedUser = new Label(parent, SWT.NULL);
+
+ update(null, null);
+
+ return label_authenticatedUser;
+ }
+
+ /* (non-Javadoc)
+ * @see java.util.Observer#update(java.util.Observable, java.lang.Object)
+ */
+ /** {@inheritDoc} */
+ @Override
+ public void update(Observable o, Object arg) {
+ User authenticatedUser = CdmStore.getLoginManager().getAuthenticatedUser();
+ // TODO find a method to recompute width for parental toolbar item
+ String text = "";
+ if(authenticatedUser == null) {
+ text = "Not logged in " ;
+ } else {
+ if(CdmStore.getCurrentSessionManager().isRemoting()) {
+ CdmRemoteSource source = (CdmRemoteSource) CdmStore.getActiveCdmSource();
+ String loginInfo = authenticatedUser.getUsername() + "@" + source.getName() + ":" + source.getContextPath();
+ PlatformUI.getWorkbench().getActiveWorkbenchWindow().getShell().setText(ApplicationUtil.getTitle() + " " + loginInfo);
+ }
+ text = "Logged in as: " + authenticatedUser.getUsername() + " ";
+ }
+
+ label_authenticatedUser.setText(text);
+ }
+
+ /* (non-Javadoc)
+ * @see org.eclipse.jface.action.ContributionItem#dispose()
+ */
+ /** {@inheritDoc} */
+ @Override
+ public void dispose() {
+ super.dispose();
+ CdmStore.getLoginManager().deleteObserver(this);
+ }
+
}
--- /dev/null
+// $Id$
+/**
+ * Copyright (C) 2015 EDIT
+ * European Distributed Institute of Taxonomy
+ * http://www.e-taxonomy.eu
+ *
+ * The contents of this file are subject to the Mozilla Public License Version 1.1
+ * See LICENSE.TXT at the top of this package for the full license terms.
+ */
+package eu.etaxonomy.taxeditor.ui.dialog;
+
+import java.util.HashMap;
+import java.util.List;
+import java.util.Map;
+
+import org.eclipse.core.runtime.IProgressMonitor;
+import org.eclipse.core.runtime.IStatus;
+import org.eclipse.core.runtime.Status;
+import org.eclipse.core.runtime.jobs.Job;
+import org.eclipse.core.runtime.preferences.ConfigurationScope;
+import org.eclipse.core.runtime.preferences.IEclipsePreferences;
+import org.eclipse.swt.SWT;
+import org.eclipse.swt.custom.StyledText;
+import org.eclipse.swt.events.MouseAdapter;
+import org.eclipse.swt.events.MouseEvent;
+import org.eclipse.swt.events.SelectionAdapter;
+import org.eclipse.swt.events.SelectionEvent;
+import org.eclipse.swt.graphics.Point;
+import org.eclipse.swt.layout.FillLayout;
+import org.eclipse.swt.layout.GridData;
+import org.eclipse.swt.layout.GridLayout;
+import org.eclipse.swt.widgets.Button;
+import org.eclipse.swt.widgets.Combo;
+import org.eclipse.swt.widgets.Composite;
+import org.eclipse.swt.widgets.Dialog;
+import org.eclipse.swt.widgets.Display;
+import org.eclipse.swt.widgets.Label;
+import org.eclipse.swt.widgets.Shell;
+import org.eclipse.swt.widgets.Text;
+import org.eclipse.ui.forms.events.ExpansionEvent;
+import org.eclipse.ui.forms.events.IExpansionListener;
+import org.eclipse.ui.forms.widgets.ExpandableComposite;
+import org.eclipse.wb.swt.SWTResourceManager;
+import org.osgi.service.prefs.BackingStoreException;
+import org.osgi.service.prefs.Preferences;
+
+import eu.etaxonomy.taxeditor.model.MessagingUtils;
+import eu.etaxonomy.taxeditor.remoting.server.CDMServerException;
+import eu.etaxonomy.taxeditor.remoting.source.CdmRemoteSource;
+import eu.etaxonomy.taxeditor.remoting.source.CdmServerInfo;
+import eu.etaxonomy.taxeditor.remoting.source.CdmServerInfo.CdmInstanceInfo;
+import eu.etaxonomy.taxeditor.remoting.source.ICdmRemoteSource;
+import eu.etaxonomy.taxeditor.store.CdmStore;
+
+/**
+ * @author cmathew
+ * @date 20 Jan 2015
+ *
+ */
+public class RemotingLoginDialog extends Dialog {
+
+ protected Object result;
+ protected Shell shlConnect;
+ private Text txtCdmServerStatus;
+ private Text txtCdmInstanceStatus;
+ private Combo comboCdmServer;
+ private Combo comboCdmInstance;
+ private Button btnConnect;
+
+ private final Map<String, CdmServerInfo> csiiMap = new HashMap<String, CdmServerInfo>();
+
+ private final static String STATUS_AVAILABLE = "Available";
+ private final static String STATUS_NOT_AVAILABLE = "Not Available";
+ private final static String STATUS_RETRIEVING = "Retrieving ...";
+ private final static String STATUS_CHECKING_AVAILABILITY = "Checking ...";
+ private final static String STATUS_NO_INSTANCES = "No Instances Found";
+ private final static String STATUS_ERROR = "Error";
+ private final static String STATUS_REMOTING_NOT_ACTIVATED = "Remoting not activated";
+ private final static String STORE_PREFERENCES_NODE = "eu.etaxonomy.taxeditor.store";
+
+ private final static String LOGIN_NODE = "login";
+ private final static String USERNAME_SUFFIX = "_username";
+ private final static String PASSWORD_SUFFIX = "_password";
+
+ private final static String LAST_SERVER_INSTANCE_NODE = "lastServerInstance";
+ private final static String LAST_SERVER_KEY = "lastServerKey";
+ private final static String LAST_INSTANCE_KEY = "lastInstanceKey";
+
+
+ private Composite remotingComposite;
+ private CdmServerInfo selectedCsii;
+ private CdmInstanceInfo selectedCdmInstance;
+ private Button btnCdmServerRefresh;
+ private Composite loginComposite;
+ private Label lblLogin;
+ private Text txtLogin;
+ private Label lblPassword;
+ private Text txtPassword;
+ private Button btnRememberMe;
+ private Composite compAdvanced;
+ private Label lblPort;
+ private Text txtPort;
+ private Label lblServerVersion;
+ private Text txtServerVersion;
+ private ExpandableComposite xpndblcmpstAdvanced;
+ private StyledText styledTxtMessage;
+
+
+ private final int MIN_WIDTH = 530;
+ private final int MIN_HEIGHT = 220;
+ private final int MIN_EXP_HEIGHT = 350;
+ private final int MESSAGE_HEIGHT = 25;
+ private Label lblEditorVersion;
+ private Text txtEditorVersion;
+ private Label lblServerCDMVersion;
+ private Text txtServerCDMVersion;
+ private Label lblEditorCDMVersion;
+ private Text txtEditorCDMVersion;
+
+ private String serverName, instanceName;
+ private boolean autoConnect = false;
+ private boolean loadLoginPrefs = true;
+ private boolean isDevRemoteSource = false;
+
+ /**
+ * Create the dialog.
+ * @param parent
+ * @param style
+ */
+ public RemotingLoginDialog(Shell parent, int style) {
+ super(parent, style);
+ setText("Login");
+ }
+
+ public Object open(CdmRemoteSource source, boolean loadLoginPrefs, boolean autoConnect) {
+ this.loadLoginPrefs = loadLoginPrefs;
+ this.serverName = source.getName();
+ String contextPath = source.getContextPath();
+ this.instanceName = contextPath.substring(contextPath.lastIndexOf("/") + 1);
+ return open(serverName, instanceName, loadLoginPrefs, autoConnect);
+ }
+
+
+ public Object open(String serverName, String instanceName, boolean loadLoginPrefs, boolean autoConnect) {
+ this.serverName = serverName;
+ this.instanceName = instanceName;
+ this.loadLoginPrefs = loadLoginPrefs;
+ this.autoConnect = autoConnect;
+ return open();
+ }
+
+ /**
+ * Open the dialog.
+ * @return the result
+ */
+ public Object open() {
+ // ICdmRemoteSource devRemoteSource = CdmServerInfo.getDevServerRemoteSource();
+ // if(devRemoteSource != null) {
+ // connect(devRemoteSource);
+ // } else {
+ createContents();
+ if(serverName == null && instanceName == null) {
+ readPrefLastServerInstance();
+ }
+
+ populateCdmServerCombo();
+ shlConnect.open();
+ shlConnect.layout();
+
+ xpndblcmpstAdvanced.setExpanded(false);
+
+ Display display = getParent().getDisplay();
+
+ while (!shlConnect.isDisposed()) {
+ if (!display.readAndDispatch()) {
+ display.sleep();
+ }
+ }
+ //}
+ return result;
+ }
+
+ /**
+ * Create contents of the dialog.
+ */
+ private void createContents() {
+ shlConnect = new Shell(getParent(), SWT.DIALOG_TRIM);
+ shlConnect.setMinimumSize(new Point(MIN_WIDTH, MIN_HEIGHT));
+ shlConnect.setSize(MIN_WIDTH, MIN_HEIGHT);
+ shlConnect.setText("Connect");
+ shlConnect.setLayout(new FillLayout(SWT.HORIZONTAL));
+
+ remotingComposite = new Composite(shlConnect, SWT.NONE);
+ remotingComposite.setLayout(new GridLayout(1, false));
+
+ Composite cdmServerComposite = new Composite(remotingComposite, SWT.NONE);
+ GridData gd_cdmServerComposite = new GridData(SWT.LEFT, SWT.CENTER, false, false, 1, 1);
+ gd_cdmServerComposite.heightHint = 68;
+ cdmServerComposite.setLayoutData(gd_cdmServerComposite);
+ cdmServerComposite.setLayout(new GridLayout(4, false));
+
+ Label lblCdmServer = new Label(cdmServerComposite, SWT.NONE);
+ lblCdmServer.setText("CDM Server : ");
+ lblCdmServer.setFont(SWTResourceManager.getFont("Ubuntu", 9, SWT.NORMAL));
+ lblCdmServer.setLayoutData(new GridData(SWT.RIGHT, SWT.CENTER, false, false, 1, 1));
+
+ comboCdmServer = new Combo(cdmServerComposite, SWT.READ_ONLY);
+ comboCdmServer.addSelectionListener(new SelectionAdapter() {
+ @Override
+ public void widgetSelected(SelectionEvent e) {
+ refreshCdmServer();
+ updatePort();
+ }
+ });
+ GridData gd_comboCdmServer = new GridData(SWT.FILL, SWT.FILL, true, false, 1, 1);
+ gd_comboCdmServer.widthHint = 150;
+ comboCdmServer.setLayoutData(gd_comboCdmServer);
+ comboCdmServer.select(0);
+
+ txtCdmServerStatus = new Text(cdmServerComposite, SWT.BORDER);
+ txtCdmServerStatus.setBackground(SWTResourceManager.getColor(SWT.COLOR_INFO_BACKGROUND));
+ txtCdmServerStatus.setEditable(false);
+ GridData gd_txtCdmServerStatus = new GridData(SWT.FILL, SWT.CENTER, true, false, 1, 1);
+ gd_txtCdmServerStatus.widthHint = 100;
+ txtCdmServerStatus.setLayoutData(gd_txtCdmServerStatus);
+
+ btnCdmServerRefresh = new Button(cdmServerComposite, SWT.NONE);
+ btnCdmServerRefresh.addSelectionListener(new SelectionAdapter() {
+ @Override
+ public void widgetSelected(SelectionEvent e) {
+ refreshCdmServer();
+ }
+ });
+ btnCdmServerRefresh.setLayoutData(new GridData(SWT.FILL, SWT.CENTER, false, false, 1, 1));
+ btnCdmServerRefresh.setText("Refresh");
+
+ Label lblCdmInstance = new Label(cdmServerComposite, SWT.NONE);
+ GridData gd_lblCdmInstance = new GridData(SWT.RIGHT, SWT.CENTER, false, false, 1, 1);
+ gd_lblCdmInstance.heightHint = 30;
+ lblCdmInstance.setLayoutData(gd_lblCdmInstance);
+ lblCdmInstance.setText("CDM Instance : ");
+ lblCdmInstance.setFont(SWTResourceManager.getFont("Ubuntu", 9, SWT.NORMAL));
+
+ comboCdmInstance = new Combo(cdmServerComposite, SWT.READ_ONLY);
+ comboCdmInstance.addSelectionListener(new SelectionAdapter() {
+ @Override
+ public void widgetSelected(SelectionEvent e) {
+ updateSelectedCdmInstance();
+ checkSelectedCdmInstance();
+ }
+ });
+ GridData gd_comboCdmInstance = new GridData(SWT.FILL, SWT.FILL, true, false, 1, 1);
+ gd_comboCdmInstance.widthHint = 150;
+ comboCdmInstance.setLayoutData(gd_comboCdmInstance);
+ comboCdmInstance.select(0);
+
+ txtCdmInstanceStatus = new Text(cdmServerComposite, SWT.BORDER);
+ txtCdmInstanceStatus.setBackground(SWTResourceManager.getColor(SWT.COLOR_INFO_BACKGROUND));
+ txtCdmInstanceStatus.setEditable(false);
+ GridData gd_txtCdmInstanceStatus = new GridData(SWT.FILL, SWT.CENTER, true, false, 1, 1);
+ gd_txtCdmInstanceStatus.widthHint = 100;
+ txtCdmInstanceStatus.setLayoutData(gd_txtCdmInstanceStatus);
+
+ Button btnCdmInstanceRefresh = new Button(cdmServerComposite, SWT.FLAT);
+ btnCdmInstanceRefresh.addSelectionListener(new SelectionAdapter() {
+ @Override
+ public void widgetSelected(SelectionEvent e) {
+ refreshCdmInstance();
+ }
+ });
+ GridData gd_btnCdmInstanceRefresh = new GridData(SWT.FILL, SWT.CENTER, true, false, 1, 1);
+ gd_btnCdmInstanceRefresh.widthHint = 110;
+ gd_btnCdmInstanceRefresh.heightHint = 30;
+ btnCdmInstanceRefresh.setLayoutData(gd_btnCdmInstanceRefresh);
+ btnCdmInstanceRefresh.setText("Refresh");
+
+ loginComposite = new Composite(remotingComposite, SWT.NONE);
+ GridData gd_loginComposite = new GridData(SWT.LEFT, SWT.CENTER, false, false, 1, 1);
+ gd_loginComposite.widthHint = 487;
+ gd_loginComposite.heightHint = 70;
+ loginComposite.setLayoutData(gd_loginComposite);
+ GridLayout gl_loginComposite = new GridLayout(6, false);
+ gl_loginComposite.marginTop = 5;
+ loginComposite.setLayout(gl_loginComposite);
+
+ lblLogin = new Label(loginComposite, SWT.CENTER);
+ GridData gd_lblLogin = new GridData(SWT.RIGHT, SWT.CENTER, false, false, 1, 1);
+ gd_lblLogin.widthHint = 50;
+ lblLogin.setLayoutData(gd_lblLogin);
+ lblLogin.setText("Login : ");
+ lblLogin.setFont(SWTResourceManager.getFont("Ubuntu", 9, SWT.NORMAL));
+
+ txtLogin = new Text(loginComposite, SWT.BORDER);
+ GridData gd_txtLogin = new GridData(SWT.FILL, SWT.FILL, true, false, 1, 1);
+ gd_txtLogin.minimumWidth = 80;
+ gd_txtLogin.widthHint = 80;
+ gd_txtLogin.heightHint = 15;
+ txtLogin.setLayoutData(gd_txtLogin);
+
+ lblPassword = new Label(loginComposite, SWT.CENTER);
+ lblPassword.setLayoutData(new GridData(SWT.RIGHT, SWT.CENTER, false, false, 1, 1));
+ lblPassword.setText("Password : ");
+ lblPassword.setFont(SWTResourceManager.getFont("Ubuntu", 9, SWT.NORMAL));
+
+ txtPassword = new Text(loginComposite, SWT.BORDER | SWT.PASSWORD);
+ GridData gd_txtPassword = new GridData(SWT.FILL, SWT.FILL, true, false, 1, 1);
+ gd_txtPassword.minimumWidth = 80;
+ gd_txtPassword.widthHint = 80;
+ gd_txtPassword.heightHint = 15;
+ txtPassword.setLayoutData(gd_txtPassword);
+ new Label(loginComposite, SWT.NONE);
+
+ btnConnect = new Button(loginComposite, SWT.FLAT);
+ btnConnect.setLayoutData(new GridData(SWT.FILL, SWT.FILL, true, false, 1, 1));
+ btnConnect.addMouseListener(new MouseAdapter() {
+ @Override
+ public void mouseUp(MouseEvent e) {
+ connect();
+ }
+ });
+ btnConnect.setText("Connect");
+
+ btnRememberMe = new Button(loginComposite, SWT.CHECK);
+ btnRememberMe.setSelection(true);
+ GridData gd_btnRememberMe = new GridData(SWT.LEFT, SWT.CENTER, false, false, 2, 1);
+ gd_btnRememberMe.widthHint = 107;
+ btnRememberMe.setLayoutData(gd_btnRememberMe);
+ btnRememberMe.setText("Remember Me");
+ new Label(loginComposite, SWT.NONE);
+ new Label(loginComposite, SWT.NONE);
+ new Label(loginComposite, SWT.NONE);
+ new Label(loginComposite, SWT.NONE);
+
+ styledTxtMessage = new StyledText(remotingComposite, SWT.NONE);
+ styledTxtMessage.setBackground(SWTResourceManager.getColor(SWT.COLOR_INFO_BACKGROUND));
+ styledTxtMessage.setForeground(SWTResourceManager.getColor(SWT.COLOR_DARK_RED));
+ styledTxtMessage.setFont(SWTResourceManager.getFont("Ubuntu", 12, SWT.BOLD));
+ styledTxtMessage.setSelectionBackground(SWTResourceManager.getColor(SWT.COLOR_LIST_SELECTION_TEXT));
+ styledTxtMessage.setSelectionForeground(SWTResourceManager.getColor(SWT.COLOR_DARK_RED));
+ styledTxtMessage.setDoubleClickEnabled(false);
+ styledTxtMessage.setEditable(false);
+ GridData gd_styledTxtMessage = new GridData(SWT.FILL, SWT.FILL, true, false, 1, 1);
+ gd_styledTxtMessage.exclude = true;
+ gd_styledTxtMessage.minimumHeight = MESSAGE_HEIGHT;
+ gd_styledTxtMessage.heightHint = MESSAGE_HEIGHT;
+ styledTxtMessage.setLayoutData(gd_styledTxtMessage);
+
+ xpndblcmpstAdvanced = new ExpandableComposite(remotingComposite, SWT.NONE, ExpandableComposite.TWISTIE);
+ GridData gd_xpndblcmpstAdvanced = new GridData(SWT.FILL, SWT.FILL, false, true, 1, 1);
+ gd_xpndblcmpstAdvanced.heightHint = 19;
+ xpndblcmpstAdvanced.setLayoutData(gd_xpndblcmpstAdvanced);
+ xpndblcmpstAdvanced.addExpansionListener(new IExpansionListener() {
+ @Override
+ public void expansionStateChanged(ExpansionEvent e) {
+ GridData gridData = (GridData) xpndblcmpstAdvanced.getLayoutData();
+ if(e.getState()) {
+ shlConnect.setSize(MIN_WIDTH, MIN_EXP_HEIGHT);
+ } else {
+ shlConnect.setSize(MIN_WIDTH, MIN_HEIGHT);
+ }
+
+ }
+ @Override
+ public void expansionStateChanging(ExpansionEvent e) {
+ }
+ });
+ xpndblcmpstAdvanced.setText("advanced");
+ xpndblcmpstAdvanced.setExpanded(true);
+
+ compAdvanced = new Composite(xpndblcmpstAdvanced, SWT.NONE);
+ xpndblcmpstAdvanced.setClient(compAdvanced);
+ compAdvanced.setLayout(new GridLayout(4, false));
+
+ lblPort = new Label(compAdvanced, SWT.CENTER);
+ lblPort.setLayoutData(new GridData(SWT.RIGHT, SWT.CENTER, false, false, 1, 1));
+ lblPort.setSize(0, 0);
+ lblPort.setText("Port : ");
+ lblPort.setFont(SWTResourceManager.getFont("Ubuntu", 9, SWT.NORMAL));
+
+ txtPort = new Text(compAdvanced, SWT.BORDER);
+ GridData gd_txtPort = new GridData(SWT.FILL, SWT.CENTER, false, false, 1, 1);
+ gd_txtPort.minimumWidth = 50;
+ gd_txtPort.widthHint = 50;
+ txtPort.setLayoutData(gd_txtPort);
+
+ lblServerVersion = new Label(compAdvanced, SWT.CENTER);
+ lblServerVersion.setLayoutData(new GridData(SWT.RIGHT, SWT.CENTER, false, false, 1, 1));
+ lblServerVersion.setText("Server Version :");
+ lblServerVersion.setFont(SWTResourceManager.getFont("Ubuntu", 9, SWT.NORMAL));
+
+ txtServerVersion = new Text(compAdvanced, SWT.BORDER);
+ txtServerVersion.setEnabled(false);
+ txtServerVersion.setEditable(false);
+ txtServerVersion.setLayoutData(new GridData(SWT.FILL, SWT.CENTER, false, false, 1, 1));
+ new Label(compAdvanced, SWT.NONE);
+ new Label(compAdvanced, SWT.NONE);
+
+ lblEditorVersion = new Label(compAdvanced, SWT.CENTER);
+ lblEditorVersion.setLayoutData(new GridData(SWT.RIGHT, SWT.CENTER, false, false, 1, 1));
+ lblEditorVersion.setText("Editor Version :");
+ lblEditorVersion.setFont(SWTResourceManager.getFont("Ubuntu", 9, SWT.NORMAL));
+
+ txtEditorVersion = new Text(compAdvanced, SWT.BORDER);
+ txtEditorVersion.setEnabled(false);
+ txtEditorVersion.setEditable(false);
+ txtEditorVersion.setLayoutData(new GridData(SWT.FILL, SWT.CENTER, true, false, 1, 1));
+ new Label(compAdvanced, SWT.NONE);
+ new Label(compAdvanced, SWT.NONE);
+
+ lblServerCDMVersion = new Label(compAdvanced, SWT.CENTER);
+ lblServerCDMVersion.setLayoutData(new GridData(SWT.RIGHT, SWT.CENTER, false, false, 1, 1));
+ lblServerCDMVersion.setText("Server CDM Version :");
+ lblServerCDMVersion.setFont(SWTResourceManager.getFont("Ubuntu", 9, SWT.NORMAL));
+
+ txtServerCDMVersion = new Text(compAdvanced, SWT.BORDER);
+ txtServerCDMVersion.setEnabled(false);
+ txtServerCDMVersion.setEditable(false);
+ txtServerCDMVersion.setLayoutData(new GridData(SWT.FILL, SWT.CENTER, true, false, 1, 1));
+ new Label(compAdvanced, SWT.NONE);
+ new Label(compAdvanced, SWT.NONE);
+
+ lblEditorCDMVersion = new Label(compAdvanced, SWT.CENTER);
+ lblEditorCDMVersion.setLayoutData(new GridData(SWT.RIGHT, SWT.CENTER, false, false, 1, 1));
+ lblEditorCDMVersion.setText("Editor CDM Version :");
+ lblEditorCDMVersion.setFont(SWTResourceManager.getFont("Ubuntu", 9, SWT.NORMAL));
+
+ txtEditorCDMVersion = new Text(compAdvanced, SWT.BORDER);
+ txtEditorCDMVersion.setEnabled(false);
+ txtEditorCDMVersion.setEditable(false);
+ txtEditorCDMVersion.setLayoutData(new GridData(SWT.FILL, SWT.CENTER, true, false, 1, 1));
+
+ }
+
+
+
+ private void populateCdmServerCombo() {
+ Job job = new Job("Retrieve Server Instances") {
+ @Override
+ protected IStatus run(IProgressMonitor monitor) {
+ Display.getDefault().syncExec(new Runnable() {
+ @Override
+ public void run() {
+ for(CdmServerInfo csii : CdmServerInfo.getCdmServers()) {
+ csiiMap.put(csii.getName(), csii);
+ comboCdmServer.add(csii.getName());
+ }
+ int serverIndex = -1;
+ if(serverName != null) {
+ serverIndex = comboCdmServer.indexOf(serverName);
+ }
+ if(serverIndex == -1) {
+ comboCdmServer.select(0);
+ autoConnect = false;
+ } else {
+ comboCdmServer.select(serverIndex);
+ }
+ CdmRemoteSource devRemoteSource = CdmServerInfo.getDevServerRemoteSource();
+ if(devRemoteSource != null) {
+ isDevRemoteSource = true;
+ }
+ refreshCdmServer();
+ updatePort();
+
+ if(devRemoteSource != null) {
+ String username = System.getProperty("cdm.server.dev.username");
+ String password = System.getProperty("cdm.server.dev.password");
+ if(username != null && !username.isEmpty() && password != null && !password.isEmpty()) {
+ txtLogin.setText(username);
+ txtPassword.setText(password);
+ CdmStore.connect(devRemoteSource, RemotingLoginDialog.this);
+ }
+ }
+ }
+ });
+ return Status.OK_STATUS;
+ }
+ };
+ job.schedule();
+ }
+
+
+ private void refreshCdmServer() {
+ txtCdmServerStatus.setText(STATUS_CHECKING_AVAILABILITY);
+ updateSelectedCdmServer();
+ checkSelectedCdmServer();
+ }
+
+ private void updateSelectedCdmServer() {
+ int selIndex = comboCdmServer.getSelectionIndex();
+ if(selIndex != -1) {
+ selectedCsii = csiiMap.get(comboCdmServer.getItem(selIndex));
+ }
+ }
+
+ private void updatePort() {
+ txtPort.setText("");
+ if(selectedCsii != null) {
+ txtPort.setText(String.valueOf(selectedCsii.getPort()));
+ }
+ }
+
+ private int getPort() {
+ int port = 0;
+ try {
+ port = Integer.valueOf(txtPort.getText());
+ } catch (NumberFormatException nfe) {
+ setMessage("Port should be an integer");
+ }
+ return port;
+ }
+
+ private void checkSelectedCdmServer() {
+
+ txtCdmInstanceStatus.setText("");
+ txtPort.setEditable(false);
+ txtPort.setEnabled(false);
+ emptyCredentials();
+
+ if(selectedCsii != null) {
+ if(selectedCsii.isLocalhost()) {
+ txtPort.setEditable(true);
+ txtPort.setEnabled(true);
+ }
+ if(selectedCsii.pingServer()) {
+ txtCdmServerStatus.setText(STATUS_AVAILABLE);
+ populateCdmInstanceCombo(true);
+
+ } else {
+ txtCdmServerStatus.setText(STATUS_NOT_AVAILABLE);
+ comboCdmInstance.removeAll();
+ }
+ }
+ }
+
+
+ private void populateCdmInstanceCombo(final boolean forceRefresh) {
+ comboCdmInstance.removeAll();
+ comboCdmInstance.setEnabled(false);
+ btnConnect.setEnabled(false);
+ txtCdmInstanceStatus.setText(STATUS_RETRIEVING);
+
+ Job job = new Job("Retrieve Server Instances") {
+ @Override
+ protected IStatus run(IProgressMonitor monitor) {
+ try {
+ if(selectedCsii != null) {
+ if(forceRefresh) {
+ selectedCsii.refreshInstances();
+ }
+ final List<CdmInstanceInfo> instances = selectedCsii.getInstances();
+ Display.getDefault().asyncExec(new Runnable() {
+ @Override
+ public void run() {
+ if(!instances.isEmpty()) {
+ for(CdmInstanceInfo cdmInstance : instances) {
+ comboCdmInstance.add(cdmInstance.getName());
+ }
+ int instanceIndex = -1;
+ if(instanceName != null) {
+ instanceIndex = comboCdmInstance.indexOf(instanceName);
+ }
+ if(instanceIndex == -1) {
+ comboCdmInstance.select(0);
+ autoConnect = false;
+ } else {
+ comboCdmInstance.select(instanceIndex);
+ }
+ updateSelectedCdmInstance();
+ checkSelectedCdmInstance();
+ comboCdmInstance.setEnabled(true);
+ if(autoConnect) {
+ connect();
+ }
+
+ } else {
+ txtCdmInstanceStatus.setText(STATUS_NO_INSTANCES);
+ btnConnect.setEnabled(false);
+ }
+ }
+ });
+ }
+ } catch (CDMServerException e) {
+ MessagingUtils.warn(getClass(), e);
+ Display.getDefault().asyncExec(new Runnable() {
+ @Override
+ public void run() {
+ txtCdmInstanceStatus.setText(STATUS_REMOTING_NOT_ACTIVATED);
+ comboCdmInstance.setEnabled(false);
+ btnConnect.setEnabled(false);
+ }
+ });
+ }
+ return Status.OK_STATUS;
+ }
+ };
+
+ if(txtCdmServerStatus.getText().equals(STATUS_AVAILABLE) && !isDevRemoteSource) {
+ // Start the Job
+ job.schedule();
+ }
+
+ }
+
+ private void refreshCdmInstance() {
+ txtCdmInstanceStatus.setText(STATUS_CHECKING_AVAILABILITY);
+ updateSelectedCdmInstance();
+ checkSelectedCdmInstance();
+ }
+
+ private void updateSelectedCdmInstance() {
+ int selIndex = comboCdmInstance.getSelectionIndex();
+ if(selIndex != -1) {
+ selectedCdmInstance = selectedCsii.getInstanceFromName(comboCdmInstance.getItem(selIndex));
+ if(loadLoginPrefs && !isDevRemoteSource) {
+ readPrefCredentials();
+ }
+ }
+ }
+
+ private void checkSelectedCdmInstance() {
+ if(txtCdmServerStatus.getText().equals(STATUS_AVAILABLE)) {
+ try {
+ if(selectedCsii.pingInstance(selectedCdmInstance, getPort())) {
+ txtCdmInstanceStatus.setText(STATUS_AVAILABLE);
+ btnConnect.setEnabled(true);
+ } else {
+ txtCdmInstanceStatus.setText(STATUS_NOT_AVAILABLE);
+ btnConnect.setEnabled(false);
+ }
+ } catch (Exception e) {
+ txtCdmInstanceStatus.setText(STATUS_NOT_AVAILABLE);
+ txtCdmInstanceStatus.setToolTipText(e.getMessage());
+ }
+ }
+
+ }
+
+ private void connect() {
+ checkSelectedCdmInstance();
+
+ if(!txtCdmInstanceStatus.getText().equals(STATUS_AVAILABLE)) {
+ return;
+ }
+
+ ICdmRemoteSource source = selectedCsii.getCdmRemoteSource(selectedCdmInstance, getPort());
+
+ if(!validateLogin()) {
+ return;
+ }
+
+ try {
+ CdmStore.connect(source, this);
+ } catch (Exception e) {
+ // Do not expect anything to go wrong at this point, so we throw a runtime exception
+ // if any problems
+ throw new RuntimeException(e);
+ }
+
+ }
+
+
+ public boolean isRememberMe() {
+ return btnRememberMe.getSelection();
+ }
+
+ private void persistPrefLastServerInstance() {
+ IEclipsePreferences preferences = ConfigurationScope.INSTANCE.getNode(STORE_PREFERENCES_NODE);
+ Preferences lastServerInstancePrefs = preferences.node(LAST_SERVER_INSTANCE_NODE);
+
+ lastServerInstancePrefs.put(LAST_SERVER_KEY, selectedCsii.getName());
+ lastServerInstancePrefs.put(LAST_INSTANCE_KEY, selectedCdmInstance.getName());
+
+ flushPreferences(lastServerInstancePrefs);
+ }
+
+ private void persistPrefCredentials() {
+ IEclipsePreferences preferences = ConfigurationScope.INSTANCE.getNode(STORE_PREFERENCES_NODE);
+ Preferences credentialsPrefs = preferences.node(LOGIN_NODE);
+ credentialsPrefs.put(getUsernamePrefKey(), txtLogin.getText());
+ credentialsPrefs.put(getPasswordPrefKey(), txtPassword.getText());
+ flushPreferences(credentialsPrefs);
+ }
+
+ private void flushPreferences(Preferences prefs) {
+ try {
+ prefs.flush();
+ } catch (BackingStoreException bse) {
+ setMessage(bse.getMessage());
+ }
+ }
+
+ private void readPrefCredentials() {
+ String username, password;
+ IEclipsePreferences preferences = ConfigurationScope.INSTANCE.getNode(STORE_PREFERENCES_NODE);
+ Preferences credentialsPrefs = preferences.node(LOGIN_NODE);
+ username = credentialsPrefs.get(getUsernamePrefKey(), "");
+ txtLogin.setText(username);
+ password = credentialsPrefs.get(getPasswordPrefKey(),"");
+ txtPassword.setText(password);
+ if(username.isEmpty() || password.isEmpty()) {
+ autoConnect = false;
+ }
+ }
+
+ private void readPrefLastServerInstance() {
+ IEclipsePreferences preferences = ConfigurationScope.INSTANCE.getNode(STORE_PREFERENCES_NODE);
+ Preferences lastServerInstancePrefs = preferences.node(LAST_SERVER_INSTANCE_NODE);
+
+ serverName = lastServerInstancePrefs.get(LAST_SERVER_KEY, null);
+ instanceName = lastServerInstancePrefs.get(LAST_INSTANCE_KEY, null);
+ }
+
+ private void emptyCredentials() {
+ txtLogin.setText("");
+ txtPassword.setText("");
+ }
+
+ private String getUsernamePrefKey() {
+ return selectedCsii.toString(selectedCdmInstance.getName(), getPort()) + USERNAME_SUFFIX;
+ }
+
+ private String getPasswordPrefKey() {
+ return selectedCsii.toString(selectedCdmInstance.getName(), getPort()) + PASSWORD_SUFFIX;
+ }
+
+ private boolean validateLogin() {
+ if(getUsername() == null || getUsername().isEmpty()) {
+ setMessage("User login cannot be empty");
+ return false;
+ }
+ if(getPassword() == null || getPassword().isEmpty()) {
+ setMessage("Password cannot be empty");
+ return false;
+ }
+ return true;
+ }
+ public String getUsername() {
+ return txtLogin.getText();
+ }
+
+ public String getPassword() {
+ return txtPassword.getText();
+ }
+
+ public void setMessage(String message) {
+ if(message != null && !message.isEmpty()) {
+ if(message.length() > 60) {
+ styledTxtMessage.setToolTipText(message);
+ message = message.substring(0, 60) + "...";
+ }
+ styledTxtMessage.setText(message);
+ styledTxtMessage.setVisible(true);
+ ((GridData)styledTxtMessage.getLayoutData()).exclude = false;
+ shlConnect.setSize(MIN_WIDTH, MIN_HEIGHT+MESSAGE_HEIGHT);
+ shlConnect.setMinimumSize(MIN_WIDTH, MIN_HEIGHT+MESSAGE_HEIGHT);
+ } else {
+ styledTxtMessage.setText("");
+ styledTxtMessage.setVisible(false);
+ ((GridData)styledTxtMessage.getLayoutData()).exclude = true;
+ shlConnect.setSize(MIN_WIDTH, MIN_HEIGHT);
+ shlConnect.setMinimumSize(MIN_WIDTH, MIN_HEIGHT);
+ }
+ remotingComposite.layout();
+ }
+
+
+
+ public void hide(boolean isHidden) {
+ if(shlConnect != null && shlConnect.getDisplay() != null) {
+ shlConnect.setVisible(!isHidden);
+ }
+ }
+ public void dispose() {
+ if(shlConnect != null && shlConnect.getDisplay() != null) {
+ shlConnect.dispose();
+ }
+ }
+
+ public void onComplete() {
+ Display.getDefault().asyncExec(new Runnable() {
+ @Override
+ public void run() {
+ if(!isDevRemoteSource) {
+ if(isRememberMe()) {
+ persistPrefCredentials();
+ }
+ persistPrefLastServerInstance();
+ }
+ dispose();
+ }
+ });
+ }
+}
import org.eclipse.swt.events.SelectionAdapter;
import org.eclipse.swt.events.SelectionEvent;
import org.eclipse.swt.events.SelectionListener;
+import org.eclipse.swt.graphics.Cursor;
import org.eclipse.swt.widgets.Composite;
import org.eclipse.swt.widgets.Control;
import org.eclipse.swt.widgets.Link;
protected T cdmBaseToBeFiltered;
+
/**
* <p>Constructor for AbstractFilteredCdmResourceSelectionDialog.</p>
*
this.conversation = conversation;
+ Cursor cursor = shell.getCursor();
+ shell.setCursor(shell.getDisplay().getSystemCursor(SWT.CURSOR_WAIT));
init();
-
initModel();
-
+ shell.setCursor(cursor);
String objectTitle = getTitle(cdmObject);
if (objectTitle != null) {
setInitialPattern(objectTitle);
/** {@inheritDoc} */
@Override
public void refresh() {
- initModel();
+ //initModel();
filterExcludedObjects();
super.refresh();
}
if (status == IStatus.OK) {
T entity = (T) wizard.getEntity();
+ model.add(new UuidAndTitleCache<T>(entity.getUuid(),
+ entity.getId(),
+ getTitle(entity)));
refresh();
setPattern(entity);
getConversationHolder().bind();
return (T) ClassificationSelectionDialog.select(shell, conversation, (Classification) currentSelection);
}
if(clazz.equals(TaxonNode.class)){
- return (T) TaxonNodeSelectionDialog.select(shell, conversation, null, null, (TaxonNode) currentSelection, null);
+ return (T) TaxonNodeSelectionDialog.select(shell, conversation, null, null, (TaxonNode) currentSelection, ((TaxonNode) currentSelection).getClassification());
}
if(clazz.equals(Reference.class)){
return (T) ReferenceSelectionDialog.select(shell, conversation, (Reference) currentSelection);
// $Id$\r
/**\r
-* Copyright (C) 2007 EDIT\r
-* European Distributed Institute of Taxonomy \r
-* http://www.e-taxonomy.eu\r
-* \r
-* The contents of this file are subject to the Mozilla Public License Version 1.1\r
-* See LICENSE.TXT at the top of this package for the full license terms.\r
-*/\r
+ * Copyright (C) 2007 EDIT\r
+ * European Distributed Institute of Taxonomy\r
+ * http://www.e-taxonomy.eu\r
+ *\r
+ * The contents of this file are subject to the Mozilla Public License Version 1.1\r
+ * See LICENSE.TXT at the top of this package for the full license terms.\r
+ */\r
\r
package eu.etaxonomy.taxeditor.ui.dialog.selection;\r
\r
* @created Sep 21, 2009\r
* @version 1.0\r
*/\r
-public class TaxonBaseSelectionDialog extends\r
- AbstractFilteredCdmResourceSelectionDialog<TaxonBase> {\r
- \r
- \r
- /**\r
- * <p>select</p>\r
- *\r
- * @param shell a {@link org.eclipse.swt.widgets.Shell} object.\r
- * @param conversation a {@link eu.etaxonomy.cdm.api.conversation.ConversationHolder} object.\r
- * @return a {@link eu.etaxonomy.cdm.model.taxon.TaxonBase} object.\r
- */\r
- public static TaxonBase selectTaxonBase(Shell shell, ConversationHolder conversation) {\r
- AbstractFilteredCdmResourceSelectionDialog<TaxonBase> dialog = new TaxonBaseSelectionDialog(TaxonBase.class, shell, conversation,\r
- "Choose a taxon", false, null, null);\r
- return getSelectionFromDialog(dialog);\r
- }\r
- \r
- /**\r
- * <p>select</p>\r
- *\r
- * @param shell a {@link org.eclipse.swt.widgets.Shell} object.\r
- * @param conversation a {@link eu.etaxonomy.cdm.api.conversation.ConversationHolder} object.\r
- * @return a {@link eu.etaxonomy.cdm.model.taxon.TaxonBase} object.\r
- */\r
- public static Taxon selectTaxon(Shell shell, ConversationHolder conversation, Taxon taxonToBeFiltered) {\r
- \r
-\r
- AbstractFilteredCdmResourceSelectionDialog<TaxonBase> dialog = new TaxonBaseSelectionDialog(Taxon.class, shell, conversation,\r
- "Choose a taxon", false, null, taxonToBeFiltered);\r
- return (Taxon) getSelectionFromDialog(dialog);\r
- }\r
- \r
- /**\r
- * <p>select</p>\r
- *\r
- * @param shell a {@link org.eclipse.swt.widgets.Shell} object.\r
- * @param conversation a {@link eu.etaxonomy.cdm.api.conversation.ConversationHolder} object.\r
- * @return a {@link eu.etaxonomy.cdm.model.taxon.TaxonBase} object.\r
- */\r
- public static Synonym selectSynonym(Shell shell, ConversationHolder conversation) {\r
- AbstractFilteredCdmResourceSelectionDialog<TaxonBase> dialog = new TaxonBaseSelectionDialog(Synonym.class, shell, conversation,\r
- "Choose a taxon", false, null, null);\r
- return (Synonym) getSelectionFromDialog(dialog);\r
- }\r
-\r
- private final Class<? extends TaxonBase> clazz;\r
- \r
- /**\r
- * <p>Constructor for FilteredTaxonBaseSelectionDialog.</p>\r
- *\r
- * @param shell a {@link org.eclipse.swt.widgets.Shell} object.\r
- * @param title a {@link java.lang.String} object.\r
- * @param conversation a {@link eu.etaxonomy.cdm.api.conversation.ConversationHolder} object.\r
- * @param multi a boolean.\r
- * @param taxon a {@link eu.etaxonomy.cdm.model.taxon.TaxonBase} object.\r
- */\r
- protected TaxonBaseSelectionDialog(Class<? extends TaxonBase> clazz, Shell shell, ConversationHolder conversation, String title, boolean multi, TaxonBase taxon, TaxonBase taxonToBeFiltered) {\r
- super(shell, conversation, title, multi, ReferenceSelectionDialog.class.getCanonicalName(), taxon);\r
- this.cdmBaseToBeFiltered = taxonToBeFiltered;\r
-\r
- \r
- \r
- this.clazz = clazz;\r
- }\r
-\r
- /* (non-Javadoc)\r
- * @see org.eclipse.ui.dialogs.FilteredItemsSelectionDialog#createExtendedContentArea(org.eclipse.swt.widgets.Composite)\r
- */\r
- /** {@inheritDoc} */\r
- @Override\r
- protected Control createExtendedContentArea(Composite parent) {\r
- return null;\r
- }\r
-\r
- /* (non-Javadoc)\r
- * @see eu.etaxonomy.taxeditor.dialogs.AbstractFilteredCdmResourceSelectionDialog#getPersistentObject(java.util.UUID)\r
- */\r
- /** {@inheritDoc} */\r
- @Override\r
- protected TaxonBase getPersistentObject(UUID uuid) {\r
- return CdmStore.getService(ITaxonService.class).load(uuid);\r
- }\r
-\r
- /* (non-Javadoc)\r
- * @see eu.etaxonomy.taxeditor.dialogs.AbstractFilteredCdmResourceSelectionDialog#initModel()\r
- */\r
- /** {@inheritDoc} */\r
- @Override\r
- protected void initModel() {\r
- if(clazz == TaxonBase.class){\r
- model = CdmStore.getService(ITaxonService.class).getUuidAndTitleCache();\r
- }\r
- else if(clazz == Taxon.class){\r
- \r
- model = CdmStore.getService(ITaxonService.class).getUuidAndTitleCacheTaxon();\r
- \r
- }\r
- else if(clazz == Synonym.class){\r
- model = CdmStore.getService(ITaxonService.class).getUuidAndTitleCacheSynonym();\r
- }\r
- }\r
-\r
- /** {@inheritDoc} */\r
- @Override\r
- protected AbstractNewEntityWizard getNewEntityWizard(String parameter) {\r
- return null;\r
- }\r
-\r
- /** {@inheritDoc} */\r
- @Override\r
- protected String getNewWizardLinkText() {\r
- return null;\r
- }\r
+public class TaxonBaseSelectionDialog extends AbstractFilteredCdmResourceSelectionDialog<TaxonBase> {\r
+\r
+\r
+ /**\r
+ * <p>select</p>\r
+ *\r
+ * @param shell a {@link org.eclipse.swt.widgets.Shell} object.\r
+ * @param conversation a {@link eu.etaxonomy.cdm.api.conversation.ConversationHolder} object.\r
+ * @return a {@link eu.etaxonomy.cdm.model.taxon.TaxonBase} object.\r
+ */\r
+ public static TaxonBase selectTaxonBase(Shell shell, ConversationHolder conversation) {\r
+ AbstractFilteredCdmResourceSelectionDialog<TaxonBase> dialog = new TaxonBaseSelectionDialog(TaxonBase.class, shell, conversation,\r
+ "Choose a taxon", false, null, null);\r
+ return getSelectionFromDialog(dialog);\r
+ }\r
+\r
+ /**\r
+ * <p>select</p>\r
+ *\r
+ * @param shell a {@link org.eclipse.swt.widgets.Shell} object.\r
+ * @param conversation a {@link eu.etaxonomy.cdm.api.conversation.ConversationHolder} object.\r
+ * @return a {@link eu.etaxonomy.cdm.model.taxon.TaxonBase} object.\r
+ */\r
+ public static Taxon selectTaxon(Shell shell, ConversationHolder conversation, Taxon taxonToBeFiltered) {\r
+\r
+\r
+ AbstractFilteredCdmResourceSelectionDialog<TaxonBase> dialog = new TaxonBaseSelectionDialog(Taxon.class, shell, conversation,\r
+ "Choose a taxon", false, null, taxonToBeFiltered);\r
+ return (Taxon) getSelectionFromDialog(dialog);\r
+ }\r
+\r
+ /**\r
+ * <p>select</p>\r
+ *\r
+ * @param shell a {@link org.eclipse.swt.widgets.Shell} object.\r
+ * @param conversation a {@link eu.etaxonomy.cdm.api.conversation.ConversationHolder} object.\r
+ * @return a {@link eu.etaxonomy.cdm.model.taxon.TaxonBase} object.\r
+ */\r
+ public static Synonym selectSynonym(Shell shell, ConversationHolder conversation) {\r
+ AbstractFilteredCdmResourceSelectionDialog<TaxonBase> dialog = new TaxonBaseSelectionDialog(Synonym.class, shell, conversation,\r
+ "Choose a taxon", false, null, null);\r
+ return (Synonym) getSelectionFromDialog(dialog);\r
+ }\r
+\r
+ private final Class<? extends TaxonBase> clazz;\r
+\r
+ /**\r
+ * <p>Constructor for FilteredTaxonBaseSelectionDialog.</p>\r
+ *\r
+ * @param shell a {@link org.eclipse.swt.widgets.Shell} object.\r
+ * @param title a {@link java.lang.String} object.\r
+ * @param conversation a {@link eu.etaxonomy.cdm.api.conversation.ConversationHolder} object.\r
+ * @param multi a boolean.\r
+ * @param taxon a {@link eu.etaxonomy.cdm.model.taxon.TaxonBase} object.\r
+ */\r
+ protected TaxonBaseSelectionDialog(Class<? extends TaxonBase> clazz, Shell shell, ConversationHolder conversation, String title, boolean multi, TaxonBase taxon, TaxonBase taxonToBeFiltered) {\r
+ super(shell, conversation, title, multi, ReferenceSelectionDialog.class.getCanonicalName(), taxon);\r
+ this.cdmBaseToBeFiltered = taxonToBeFiltered;\r
+ this.clazz = clazz;\r
+ initModel();\r
+ }\r
+\r
+ /* (non-Javadoc)\r
+ * @see org.eclipse.ui.dialogs.FilteredItemsSelectionDialog#createExtendedContentArea(org.eclipse.swt.widgets.Composite)\r
+ */\r
+ /** {@inheritDoc} */\r
+ @Override\r
+ protected Control createExtendedContentArea(Composite parent) {\r
+ return null;\r
+ }\r
+\r
+ /* (non-Javadoc)\r
+ * @see eu.etaxonomy.taxeditor.dialogs.AbstractFilteredCdmResourceSelectionDialog#getPersistentObject(java.util.UUID)\r
+ */\r
+ /** {@inheritDoc} */\r
+ @Override\r
+ protected TaxonBase getPersistentObject(UUID uuid) {\r
+ return CdmStore.getService(ITaxonService.class).load(uuid);\r
+ }\r
+\r
+ /* (non-Javadoc)\r
+ * @see eu.etaxonomy.taxeditor.dialogs.AbstractFilteredCdmResourceSelectionDialog#initModel()\r
+ */\r
+ /** {@inheritDoc} */\r
+ @Override\r
+ protected void initModel() {\r
+ if(clazz == TaxonBase.class){\r
+ model = CdmStore.getService(ITaxonService.class).getUuidAndTitleCache();\r
+ }\r
+ else if(clazz == Taxon.class){\r
+\r
+ model = CdmStore.getService(ITaxonService.class).getUuidAndTitleCacheTaxon();\r
+\r
+ }\r
+ else if(clazz == Synonym.class){\r
+ model = CdmStore.getService(ITaxonService.class).getUuidAndTitleCacheSynonym();\r
+ }\r
+ }\r
+\r
+ /** {@inheritDoc} */\r
+ @Override\r
+ protected AbstractNewEntityWizard getNewEntityWizard(String parameter) {\r
+ return null;\r
+ }\r
+\r
+ /** {@inheritDoc} */\r
+ @Override\r
+ protected String getNewWizardLinkText() {\r
+ return null;\r
+ }\r
}\r
*/
package eu.etaxonomy.taxeditor.ui.dialog.selection;
+import java.util.Collections;
+import java.util.Comparator;
import java.util.List;
import java.util.UUID;
import eu.etaxonomy.taxeditor.store.CdmStore;
/**
- * <p>FilteredTaxonNodeSelectionDialog class.</p>
- *
* @author p.ciardelli
* @version $Id: $
*/
public class TaxonNodeSelectionDialog extends AbstractFilteredCdmResourceSelectionDialog<TaxonNode> implements SelectionListener{
- /**
- * <p>select</p>
- *
- * @param shell a {@link org.eclipse.swt.widgets.Shell} object.
- * @param conversation a {@link eu.etaxonomy.cdm.api.conversation.ConversationHolder} object.
- * @param title a {@link java.lang.String} object.
- * @param excludeTaxa a {@link java.util.List} object.
- * @param node a {@link eu.etaxonomy.cdm.model.taxon.TaxonNode} object.
- * @return a {@link eu.etaxonomy.cdm.model.taxon.TaxonNode} object.
- */
public static TaxonNode select(Shell shell, ConversationHolder conversation, String title, List<UUID> excludeTaxa, TaxonNode node, Classification classification) {
TaxonNodeSelectionDialog dialog = new TaxonNodeSelectionDialog(shell,
conversation,
private Classification selectedClassification;
- /**
- * <p>Constructor for FilteredTaxonNodeSelectionDialog.</p>
- *
- * @param shell a {@link org.eclipse.swt.widgets.Shell} object.
- * @param title a {@link java.lang.String} object.
- * @param conversation a {@link eu.etaxonomy.cdm.api.conversation.ConversationHolder} object.
- * @param excludeTaxa a {@link java.util.List} object.
- * @param multi a boolean.
- * @param node a {@link eu.etaxonomy.cdm.model.taxon.TaxonNode} object.
- */
protected TaxonNodeSelectionDialog(Shell shell, ConversationHolder conversation, String title, List<UUID> excludeTaxa, boolean multi, TaxonNode node, Classification classification) {
super(shell, conversation, title, multi, TaxonNodeSelectionDialog.class.getCanonicalName(), node);
}
}
-
- /* (non-Javadoc)
- * @see org.eclipse.ui.dialogs.FilteredItemsSelectionDialog#createExtendedContentArea(org.eclipse.swt.widgets.Composite)
- */
/** {@inheritDoc} */
@Override
protected Control createExtendedContentArea(Composite parent) {
return "";
}
- /* (non-Javadoc)
- * @see eu.etaxonomy.taxeditor.dialogs.AbstractFilteredCdmResourceSelectionDialog#getPersistentObject(java.util.UUID)
- */
/** {@inheritDoc} */
@Override
protected TaxonNode getPersistentObject(UUID uuid) {
return CdmStore.getService(IClassificationService.class).getTaxonNodeByUuid(uuid);
}
- /* (non-Javadoc)
- * @see eu.etaxonomy.taxeditor.dialogs.AbstractFilteredCdmResourceSelectionDialog#initModel()
- */
/** {@inheritDoc} */
@Override
protected void initModel() {
if(classifications == null){
classifications = CdmStore.getService(IClassificationService.class).list(null, null, null, null, null);
+ Collections.sort(classifications, new Comparator<Classification>() {
+
+ @Override
+ public int compare(Classification o1, Classification o2) {
+ return o1.getTitleCache().compareTo(o2.getTitleCache());
+ }
+ });
selectedClassification = classifications.iterator().next();
}
--- /dev/null
+// $Id$
+/**
+* Copyright (C) 2007 EDIT
+* European Distributed Institute of Taxonomy
+* http://www.e-taxonomy.eu
+*
+* The contents of this file are subject to the Mozilla Public License Version 1.1
+* See LICENSE.TXT at the top of this package for the full license terms.
+*/
+
+package eu.etaxonomy.taxeditor.ui.element;
+
+import org.eclipse.jface.resource.JFaceResources;
+import org.eclipse.swt.SWT;
+import org.eclipse.swt.widgets.Composite;
+import org.eclipse.swt.widgets.Display;
+import org.eclipse.swt.widgets.Label;
+import org.eclipse.ui.forms.widgets.TableWrapLayout;
+
+import eu.etaxonomy.taxeditor.Messages;
+
+/**
+ *
+ * @author pplitzner
+ * @date Sep 21, 2015
+ *
+ */
+public abstract class AbstractUriWithExceptionLabelElement <T> extends TextWithLabelElement {
+
+ protected Label labelException;
+
+ protected AbstractUriWithExceptionLabelElement(CdmFormFactory formFactory,
+ ICdmFormElement parentElement, String labelString,
+ T initialObject, Integer textHeight, int style) {
+ super(formFactory, parentElement, false);
+
+ init(formFactory, labelString, initialObject, textHeight, style);
+ }
+
+ protected void init(CdmFormFactory formFactory, String labelString, T initialObject, Integer textHeight, int style) {
+ //label
+ initLabel(formFactory, labelString, false, getLayoutComposite());
+
+ //uri text
+ initText(formFactory, null, textHeight, null, false, style, getLayoutComposite());
+
+ //exceptionLabel
+ initExceptionLabel(getLayoutComposite(), formFactory, initialObject);
+ }
+
+ protected void initExceptionLabel(Composite parent, CdmFormFactory formFactory, T initialObject) {
+ labelException = formFactory.createLabel(parent, "", SWT.WRAP); //$NON-NLS-1$
+ int numColumns = AbstractFormSection.DEFAULT_NUM_COLUMNS;
+ if(parent.getLayout() instanceof TableWrapLayout){
+ numColumns = ((TableWrapLayout)parent.getLayout()).numColumns;
+ }
+ labelException.setLayoutData(LayoutConstants.FILL_HORIZONTALLY(numColumns, 1));
+ addControl(labelException);
+ setParsedText(initialObject);
+ }
+
+
+ public abstract void setParsedText(T object);
+
+ protected abstract T getParsedText() throws Exception;
+
+ public T parseText(){
+ try {
+ labelException.setFont(JFaceResources.getFontRegistry().get(JFaceResources.DEFAULT_FONT));
+ labelException.setForeground(getPersistentBackground());
+ labelException.setText(""); //$NON-NLS-1$
+ return getParsedText();
+ } catch (Exception e) {
+ labelException.setFont(JFaceResources.getFontRegistry().getBold(JFaceResources.DEFAULT_FONT));
+ labelException.setForeground(Display.getCurrent().getSystemColor(SWT.COLOR_RED));
+ labelException.setText(Messages.UriWithLabelElement_URL_NOT_SAVED+e.getLocalizedMessage());
+ return null;
+ }
+ }
+
+}
import eu.etaxonomy.cdm.model.common.IEnumTerm;
import eu.etaxonomy.cdm.model.common.IdentifiableSource;
import eu.etaxonomy.cdm.model.common.Identifier;
+import eu.etaxonomy.cdm.model.common.LSID;
import eu.etaxonomy.cdm.model.common.Language;
import eu.etaxonomy.cdm.model.common.LanguageString;
import eu.etaxonomy.cdm.model.common.Marker;
import eu.etaxonomy.taxeditor.ui.section.occurrence.GatheringEventDetailElement;
import eu.etaxonomy.taxeditor.ui.section.occurrence.GatheringEventDetailSection;
import eu.etaxonomy.taxeditor.ui.section.occurrence.GeoScopeDetailSection;
+import eu.etaxonomy.taxeditor.ui.section.occurrence.GeoScopePolyKeyDetailSection;
import eu.etaxonomy.taxeditor.ui.section.occurrence.NamedAreaDetailElement;
import eu.etaxonomy.taxeditor.ui.section.occurrence.OriginalLabelDataSection;
import eu.etaxonomy.taxeditor.ui.section.occurrence.SourceCollectionDetailSection;
return element;
}
+ public LsidWithExceptionLabelElement createLsidWithExceptionLabelElement(ICdmFormElement parentElement, String labelString,
+ LSID initialLsid, int style) {
+ LsidWithExceptionLabelElement element = new LsidWithExceptionLabelElement(this, parentElement, labelString, initialLsid, null, style);
+ adapt(element);
+ parentElement.addElement(element);
+ return element;
+ }
+
public UriWithLabelElement createUriWithLabelElement(ICdmFormElement parentElement, String labelString,
URI initialUri, int style) {
UriWithLabelElement element = new UriWithLabelElement(this, parentElement, labelString, initialUri, null, style);
return section;
}
+ public GeoScopePolyKeyDetailSection createGeoScopePolyKeyDetailSection(ConversationHolder conversation, ICdmFormElement parentElement, int style){
+ GeoScopePolyKeyDetailSection section = new GeoScopePolyKeyDetailSection(this, conversation, parentElement, style);
+ addAndAdaptSection(parentElement, section);
+ return section;
+ }
+
public IdentifierDetailSection createIdentifierDetailSection(ConversationHolder conversation, ICdmFormElement parentElement, int style){
IdentifierDetailSection section = new IdentifierDetailSection(this, conversation, parentElement, style);
addAndAdaptSection(parentElement, section);
// $Id$
/**
* Copyright (C) 2007 EDIT
-* European Distributed Institute of Taxonomy
+* European Distributed Institute of Taxonomy
* http://www.e-taxonomy.eu
-*
+*
* The contents of this file are subject to the Mozilla Public License Version 1.1
* See LICENSE.TXT at the top of this package for the full license terms.
*/
/**
- * <p>ISelectableElement interface.</p>
+ * Implementors of this interface provide a {@link SelectionArbitrator}.<br>
+ * The arbitrator allows the element to be selected to show e.g.
+ * supplemental data.<br>
+ * An arbitrator can be added like in the following code example:
+ * <br>
+ * <br>
+ * <pre>
+ * //make element selectable
+ * if(cdmFormFactory.getSelectionProvider() != null){
+ * selectionArbitrator = cdmFormFactory.createSelectionArbitrator(this);
+ * }
+ * </pre>
*
* @author n.hoffmann
* @created Mar 5, 2010
return languageString;
}
+ public LanguageString updateLanguageString(LanguageString ls) {
+ if(ls == null){
+ ls = LanguageString.NewInstance("", CdmStore.getDefaultLanguage());
+ }
+ ls.setText(text.getText());
+ return ls;
+ }
+
/** {@inheritDoc} */
@Override
public void modifyText(ModifyEvent e) {
--- /dev/null
+// $Id$
+/**
+* Copyright (C) 2007 EDIT
+* European Distributed Institute of Taxonomy
+* http://www.e-taxonomy.eu
+*
+* The contents of this file are subject to the Mozilla Public License Version 1.1
+* See LICENSE.TXT at the top of this package for the full license terms.
+*/
+
+package eu.etaxonomy.taxeditor.ui.element;
+
+import eu.etaxonomy.cdm.model.common.LSID;
+
+/**
+ *
+ * @author pplitzner
+ * @date Sep 21, 2015
+ *
+ */
+public class LsidWithExceptionLabelElement extends AbstractUriWithExceptionLabelElement<LSID> {
+
+ protected LsidWithExceptionLabelElement(CdmFormFactory formFactory, ICdmFormElement parentElement,
+ String labelString, LSID initialObject, Integer textHeight, int style) {
+ super(formFactory, parentElement, labelString, initialObject, textHeight, style);
+ }
+
+ /**
+ * {@inheritDoc}
+ */
+ @Override
+ public void setParsedText(LSID object) {
+ if(object != null){
+ super.setText(object.toString());
+ }
+ }
+
+ /**
+ * {@inheritDoc}
+ */
+ @Override
+ public LSID getParsedText() throws Exception {
+ return new LSID(super.getText());
+ }
+
+}
import org.eclipse.core.runtime.IStatus;
import org.eclipse.core.runtime.Status;
-import org.eclipse.jface.resource.JFaceResources;
import org.eclipse.swt.SWT;
import org.eclipse.swt.events.SelectionAdapter;
import org.eclipse.swt.events.SelectionEvent;
import org.eclipse.swt.widgets.Button;
import org.eclipse.swt.widgets.Composite;
-import org.eclipse.swt.widgets.Display;
-import org.eclipse.swt.widgets.Label;
import org.eclipse.ui.PartInitException;
import org.eclipse.ui.PlatformUI;
-import org.eclipse.ui.forms.widgets.TableWrapLayout;
import eu.etaxonomy.taxeditor.Messages;
import eu.etaxonomy.taxeditor.model.ImageResources;
* @created Dec 20, 2010
* @version 1.0
*/
-public class UriWithLabelElement extends TextWithLabelElement {
+public class UriWithLabelElement extends AbstractUriWithExceptionLabelElement<URI> {
- private final Label labelException;
- private final Button btnOpenBrowser;
+ private Button btnOpenBrowser;
- protected UriWithLabelElement(CdmFormFactory formFactory,
- ICdmFormElement parentElement, String labelString,
- URI initialUri, Integer textHeight, int style) {
- super(formFactory, parentElement, false);
+ protected UriWithLabelElement(CdmFormFactory formFactory, ICdmFormElement parentElement, String labelString,
+ URI initialObject, Integer textHeight, int style) {
+ super(formFactory, parentElement, labelString, initialObject, textHeight, style);
- //label
+ }
+
+ /**
+ * {@inheritDoc}
+ */
+ @Override
+ protected void init(CdmFormFactory formFactory, String labelString, URI initialObject, Integer textHeight, int style) {
+
+ //label
initLabel(formFactory, labelString, false, getLayoutComposite());
//composite(uri + button)
initText(formFactory, null, textHeight, null, false, style, textAndButton);
//button
- btnOpenBrowser = formFactory.createButton(textAndButton, "", SWT.NONE); //$NON-NLS-1$
- btnOpenBrowser.setImage(ImageResources.getImage(ImageResources.WEB));
- btnOpenBrowser.setToolTipText(Messages.UriWithLabelElement_OPEN_EXTERNAL_BROWSER);
- btnOpenBrowser.addSelectionListener(new SelectionAdapter() {
- @Override
- public void widgetSelected(SelectionEvent e) {
- String errorTitle = Messages.UriWithLabelElement_INVALID_URL;
- String errorText = Messages.UriWithLabelElement_COULD_NOT_OPEN_BROWSER;
-
- URI uri = getUri();
- if(uri!=null){
- try {
+ btnOpenBrowser = formFactory.createButton(textAndButton, "", SWT.NONE); //$NON-NLS-1$
+ btnOpenBrowser.setImage(ImageResources.getImage(ImageResources.WEB));
+ btnOpenBrowser.setToolTipText(Messages.UriWithLabelElement_OPEN_EXTERNAL_BROWSER);
+ btnOpenBrowser.addSelectionListener(new SelectionAdapter() {
+ @Override
+ public void widgetSelected(SelectionEvent e) {
+ String errorTitle = Messages.UriWithLabelElement_INVALID_URL;
+ String errorText = Messages.UriWithLabelElement_COULD_NOT_OPEN_BROWSER;
+
+ URI uri = parseText();
+ if(uri!=null){
+ try {
PlatformUI.getWorkbench().getBrowserSupport().getExternalBrowser().openURL(uri.toURL());
} catch (PartInitException pie) {
MessagingUtils.informationDialog(errorTitle, new Status(IStatus.WARNING, TaxeditorStorePlugin.PLUGIN_ID, errorText, pie));
} catch (IllegalArgumentException iae) {
MessagingUtils.informationDialog(errorTitle, new Status(IStatus.WARNING, TaxeditorStorePlugin.PLUGIN_ID, errorText, iae));
}
- }
- else{
- MessagingUtils.informationDialog(errorTitle, new Status(IStatus.WARNING, TaxeditorStorePlugin.PLUGIN_ID, errorText, null));
- }
- }
+ }
+ else{
+ MessagingUtils.informationDialog(errorTitle, new Status(IStatus.WARNING, TaxeditorStorePlugin.PLUGIN_ID, errorText, null));
+ }
+ }
});
- btnOpenBrowser.setLayoutData(LayoutConstants.RIGHT());
-
- labelException = formFactory.createLabel(getLayoutComposite(), "", SWT.WRAP); //$NON-NLS-1$
- int numColumns = AbstractFormSection.DEFAULT_NUM_COLUMNS;
- if(getLayoutComposite().getLayout() instanceof TableWrapLayout){
- numColumns = ((TableWrapLayout)getLayoutComposite().getLayout()).numColumns;
- }
- labelException.setLayoutData(LayoutConstants.FILL_HORIZONTALLY(numColumns, 1));
- addControl(labelException);
- setUri(initialUri);
- }
+ btnOpenBrowser.setLayoutData(LayoutConstants.RIGHT());
+
+ initExceptionLabel(getLayoutComposite(), formFactory, initialObject);
+ }
- public void setUri(URI uri) {
- if(uri != null){
- super.setText(uri.toString());
- }
- }
- public URI getUri(){
- try {
- labelException.setFont(JFaceResources.getFontRegistry().get(JFaceResources.DEFAULT_FONT));
- labelException.setForeground(getPersistentBackground());
- labelException.setText(""); //$NON-NLS-1$
- return new URI(super.getText());
- } catch (Exception e) {
- labelException.setFont(JFaceResources.getFontRegistry().getBold(JFaceResources.DEFAULT_FONT));
- labelException.setForeground(Display.getCurrent().getSystemColor(SWT.COLOR_RED));
- labelException.setText(Messages.UriWithLabelElement_URL_NOT_SAVED+e.getLocalizedMessage());
- return null;
+
+ /**
+ * {@inheritDoc}
+ */
+ @Override
+ public void setParsedText(URI object) {
+ if(object != null){
+ super.setText(object.toString());
}
- }
+ }
+
+ /**
+ * {@inheritDoc}
+ */
+ @Override
+ protected URI getParsedText() throws Exception {
+ return new URI(super.getText());
+ }
}
import org.eclipse.swt.SWT;
import org.eclipse.swt.widgets.Label;
+import eu.etaxonomy.cdm.api.application.CdmApplicationRemoteConfiguration;
import eu.etaxonomy.cdm.common.UriUtils;
+import eu.etaxonomy.cdm.ext.geo.IEditGeoService;
import eu.etaxonomy.cdm.model.common.Language;
import eu.etaxonomy.cdm.model.description.PresenceAbsenceTerm;
import eu.etaxonomy.cdm.model.description.TaxonDescription;
List<Language> languages = Arrays.asList(new Language[]{CdmStore.getDefaultLanguage()});
- String parameter = CdmStore.getGeoService().getDistributionServiceRequestParameterString(
+ IEditGeoService editGeoService = ((CdmApplicationRemoteConfiguration)CdmStore.getCurrentApplicationConfiguration()).getEditGeoService();
+ String parameter = editGeoService.getDistributionServiceRequestParameterString(
getTaxonDescriptions(),
- false,
- false,
-
+ false,
+ false,
null,
- presenceAbsenceTermColors,
+ presenceAbsenceTermColors,
languages);
String mapUriString = String.format("%s?%s&ms=1000&bbox=-180,-90,180,90&l=earth", accessPoint, parameter);
*/
package eu.etaxonomy.taxeditor.ui.section.key;
+import org.eclipse.swt.SWT;
+
import eu.etaxonomy.cdm.model.description.PolytomousKey;
import eu.etaxonomy.taxeditor.ui.element.CdmFormFactory;
import eu.etaxonomy.taxeditor.ui.element.CdmPropertyChangeEvent;
import eu.etaxonomy.taxeditor.ui.element.ICdmFormElement;
+import eu.etaxonomy.taxeditor.ui.element.LayoutConstants;
import eu.etaxonomy.taxeditor.ui.element.NumberWithLabelElement;
import eu.etaxonomy.taxeditor.ui.element.TextWithLabelElement;
import eu.etaxonomy.taxeditor.ui.section.AbstractCdmDetailElement;
+import eu.etaxonomy.taxeditor.ui.section.occurrence.GeoScopePolyKeyDetailSection;
/**
* @author n.hoffmann
private TextWithLabelElement textLabel;
private NumberWithLabelElement numberStartNumber;
+ private TaxonomicScopeSection sectionTaxonomicScope;
+ private GeoScopePolyKeyDetailSection sectionGeoScopes;
public PolytomousKeyDetailElement(CdmFormFactory formFactory,
ICdmFormElement formElement) {
protected void createControls(ICdmFormElement formElement,
PolytomousKey entity, int style) {
textLabel = formFactory.createTextWithLabelElement(formElement, "Title", entity.getTitleCache(), style);
- numberStartNumber = formFactory.createNumberTextWithLabelElement(formElement, "Start Number", entity.getStartNumber(), style);
+
+ numberStartNumber = formFactory.createNumberTextWithLabelElement(formElement, "Start Number", entity.getStartNumber(), style);
+
+ sectionTaxonomicScope = formFactory.createTaxonomicScopeSection(getConversationHolder(), formElement, style);
+ sectionTaxonomicScope.setLayoutData(LayoutConstants.FILL_HORIZONTALLY(2, 1));
+ sectionTaxonomicScope.setEntity(entity);
+
+ sectionGeoScopes = formFactory.createGeoScopePolyKeyDetailSection(getConversationHolder(), formElement, SWT.NULL);
+ sectionGeoScopes.setLayoutData(LayoutConstants.FILL_HORIZONTALLY(2, 1));
+ sectionGeoScopes.setEntity(entity);
}
public String getText() {
return textLabel.getText();
}
- /*
- * (non-Javadoc)
- *
- * @see
- * eu.etaxonomy.taxeditor.section.AbstractCdmDetailElement#handleEvent(java
- * .lang.Object)
- */
@Override
public void handleEvent(Object eventSource) {
if(eventSource==textLabel){
public void handleEvent(Object eventSource) {
if(eventSource == text_uri){
try {
- URI uri = text_uri.getUri();
+ URI uri = text_uri.parseText();
getEntity().setUri(uri);
if(uri==null){
//buffer URI if parsing error occurred
public void handleEvent(Object eventSource){
if(eventSource==textUri){
textUri.setBackground(getPersistentBackground());
- URI uri = textUri.getUri();
+ URI uri = textUri.parseText();
singleMediaRepresentationPart.setUri(uri);
if(uri==null){
uriBuffer=textUri.getText();
}
textUri = formFactory.createUriWithLabelElement(parentFormElement, "Media URI", null, style);
URI uri = singleMediaRepresentationPart.getUri();
- textUri.setUri(uri);
+ textUri.setParsedText(uri);
//set buffered uri as text if uri had parsing problems in advanced view
if(uri==null && uriBuffer!=null){
textUri.setText(uriBuffer);
- textUri.getUri();
+ textUri.parseText();
}
textUri.getLayoutComposite().layout();
}
import eu.etaxonomy.taxeditor.ui.element.AbstractFormSection;
import eu.etaxonomy.taxeditor.ui.element.CdmFormFactory;
import eu.etaxonomy.taxeditor.ui.element.ICdmFormElement;
+import eu.etaxonomy.taxeditor.ui.element.ISelectableElement;
import eu.etaxonomy.taxeditor.ui.element.LanguageStringWithLabelElement;
+import eu.etaxonomy.taxeditor.ui.element.SelectionArbitrator;
import eu.etaxonomy.taxeditor.ui.section.AbstractCdmDetailSection;
import eu.etaxonomy.taxeditor.ui.section.AbstractEntityCollectionElement;
import eu.etaxonomy.taxeditor.ui.selection.EntitySelectionElement;
* @created Nov 17, 2009
* @version 1.0
*/
-public class MediaMetaElement extends AbstractEntityCollectionElement<Media> implements ITogglableMediaElement{
+public class MediaMetaElement extends AbstractEntityCollectionElement<Media> implements ISelectableElement, ITogglableMediaElement{
private EntitySelectionElement<AgentBase> selection_artist;
private LanguageStringWithLabelElement text_description;
private LanguageStringWithLabelElement text_title;
private MediaDetailElement mediaDetailElement;
+ private SelectionArbitrator selectionArbitrator;
public MediaMetaElement(CdmFormFactory cdmFormFactory,
AbstractFormSection<?> formElement, Media element,
SelectionListener removeListener, boolean isChoosableEntity, int style) {
super(cdmFormFactory, formElement, element, removeListener, isChoosableEntity, null, style);
+ //make element selectable
+ if(cdmFormFactory.getSelectionProvider() != null){
+ selectionArbitrator = cdmFormFactory.createSelectionArbitrator(this);
+ }
}
/** {@inheritDoc} */
}
}
+ @Override
+ public SelectionArbitrator getSelectionArbitrator() {
+ return selectionArbitrator;
+ }
+
}
text_size.setText(FileUtils.byteCountToDisplaySize(entity.getSize()));
}
if(entity.getUri() != null){
- text_uri.setUri(entity.getUri());
+ text_uri.setParsedText(entity.getUri());
} else {
String uriBuffer = getParentMediaDetailElement().getUriBuffer();
if(uriBuffer!=null){
text_uri.setText(uriBuffer);
- text_uri.getUri();//just to update the error label
+ text_uri.parseText();//just to update the error label
}
}
}
@Override
public void handleEvent(Object eventSource) {
if(eventSource == text_uri){
- URI uri = text_uri.getUri();
+ URI uri = text_uri.parseText();
getEntity().setUri(uri);
if(uri==null){
//buffer URI if parsing error occurred
public NameDetailElement(CdmFormFactory cdmFormFactory, ICdmFormElement formElement,
int style) {
super(cdmFormFactory, formElement);
- // register as selection listener
+ // make this element selectable
if(cdmFormFactory.getSelectionProvider() != null){
selectionArbitrator = cdmFormFactory.createSelectionArbitrator(this);
}
import eu.etaxonomy.taxeditor.ui.element.CdmFormFactory;
import eu.etaxonomy.taxeditor.ui.element.ICdmFormElement;
import eu.etaxonomy.taxeditor.ui.element.LayoutConstants;
+import eu.etaxonomy.taxeditor.ui.element.LsidWithExceptionLabelElement;
import eu.etaxonomy.taxeditor.ui.section.AbstractCdmDetailSection;
import eu.etaxonomy.taxeditor.ui.section.AbstractIdentifiableEntityDetailElement;
private AuthorshipDetailSection section_author;
private EnumComboElement<NomenclaturalCode> combo_nomenclaturalCode;
private HybridDetailSection section_hybrid;
+ private LsidWithExceptionLabelElement textLsid;
public NonViralNameDetailElement(CdmFormFactory formFactory,
ICdmFormElement formElement) {
addControl(section_hybrid);
addElement(section_hybrid);
}
+
+ textLsid = formFactory.createLsidWithExceptionLabelElement(formElement, "Lsid", entity.getLsid(), style);
}
/** {@inheritDoc} */
section_name.setEntity(getEntity());
getLayoutComposite().layout();
}
+ else if(eventSource==textLsid){
+ getEntity().setLsid(textLsid.parseText());
+ }
}
}
@Override
public void handleEvent(Object eventSource) {
if(eventSource == protologueUriText && protologueUriText.getText()!=null){
- mediaRepresentationPart.setUri(protologueUriText.getUri());
+ mediaRepresentationPart.setUri(protologueUriText.parseText());
}
}
*/
public class DerivedUnitBaseWizardPage extends AbstractCdmEntityWizardPage<DerivedUnitFacade> {
- /**
- * @param formFactory
- * @param conversation
- * @param entity
- */
public DerivedUnitBaseWizardPage(CdmFormFactory formFactory,
ConversationHolder conversation, DerivedUnitFacade entity) {
super(formFactory, conversation, entity);
setPageComplete(true);
}
- /* (non-Javadoc)
- * @see eu.etaxonomy.taxeditor.ui.forms.AbstractCdmEntityWizardPage#checkComplete()
- */
@Override
protected void checkComplete() {
setPageComplete(true);
}
- /* (non-Javadoc)
- * @see eu.etaxonomy.taxeditor.forms.AbstractCdmEntityWizardPage#createElement(eu.etaxonomy.taxeditor.forms.ICdmFormElement)
- */
@Override
public AbstractCdmDetailElement<DerivedUnitFacade> createElement(ICdmFormElement rootElement) {
DerivedUnitBaseDetailElement detailElement = formFactory.createDerivedUnitBaseDetailElement(rootElement);
AbstractCdmDetailElement<DerivedUnitFacade> {
boolean showOnlyDerivedUnitData = false;
+ //TODO: flag to disable specimen type dropdown (#5244)
+ boolean showSpecimenType = true;
private ToggleableTextElement toggleableText_titleCache;
private EnumComboElement<SpecimenOrObservationType> combo_specorobstype;
super(formFactory, formElement);
}
- /*
- * (non-Javadoc)
- *
- * @see
- * eu.etaxonomy.taxeditor.section.AbstractCdmDetailElement#createControls
- * (eu.etaxonomy.taxeditor.forms.ICdmFormElement, java.lang.Object, int)
- */
@Override
protected void createControls(ICdmFormElement formElement,
DerivedUnitFacade entity, int style) {
else{
combo_specorobstype = formFactory.createEnumComboElement(SpecimenOrObservationType.class, formElement, style);
combo_specorobstype.setSelection(entity.getType());
+ combo_specorobstype.setEnabled(showSpecimenType);
selection_country = formFactory.createSelectionElement(NamedArea.class, getConversationHolder(),
formElement, "Country",
entity.getCountry(), EntitySelectionElement.NOTHING, style);
}
- /*
- * (non-Javadoc)
- *
- * @see
- * eu.etaxonomy.taxeditor.section.AbstractCdmDetailElement#handleEvent(java
- * .lang.Object)
- */
@Override
public void handleEvent(Object eventSource) {
if (eventSource == toggleableText_titleCache) {
this.showOnlyDerivedUnitData = showOnlyDerivedUnitData;
}
+ public void setShowSpecimenType(boolean showSpecimenType) {
+ this.showSpecimenType = showSpecimenType;
+ }
+
}
*/
public class DerivedUnitGeneralWizardPage extends AbstractCdmEntityWizardPage<DerivedUnitFacade> {
- /**
- * @param formFactory
- * @param conversation
- * @param entity
- */
public DerivedUnitGeneralWizardPage(CdmFormFactory formFactory,
ConversationHolder conversation, DerivedUnitFacade entity) {
super(formFactory, conversation, entity);
setTitle("General Specimen Data");
}
- /* (non-Javadoc)
- * @see eu.etaxonomy.taxeditor.ui.forms.AbstractCdmEntityWizardPage#checkComplete()
- */
@Override
protected void checkComplete() {
setPageComplete(true);
}
- /* (non-Javadoc)
- * @see eu.etaxonomy.taxeditor.forms.AbstractCdmEntityWizardPage#createElement(eu.etaxonomy.taxeditor.forms.ICdmFormElement)
- */
@Override
public AbstractCdmDetailElement<DerivedUnitFacade> createElement(ICdmFormElement rootElement) {
DerivedUnitGeneralDetailElement detailElement = formFactory.createDerivedUnitGeneralDetailElement(rootElement);
+ detailElement.setShowSpecimenType(false);
detailElement.setEntity(getEntity());
checkComplete();
return detailElement;
} else if (eventSource == selection_country) {
getEntity().setCountry(selection_country.getSelection());
} else if (eventSource == languageText_locality) {
- LanguageString locality = languageText_locality.getLanguageString();
+ LanguageString locality = languageText_locality.updateLanguageString(getEntity().getLocality());
getEntity().setLocality(locality);
} else if (eventSource == element_point) {
getEntity().setExactLocation(element_point.getPoint());
*/
public class FieldUnitWizardPage extends AbstractCdmEntityWizardPage<DerivedUnitFacade> {
- /**
- * @param formFactory
- * @param conversation
- * @param entity
- */
public FieldUnitWizardPage(CdmFormFactory formFactory,
ConversationHolder conversation, DerivedUnitFacade entity) {
super(formFactory, conversation, entity);
setPageComplete(true);
}
- /* (non-Javadoc)
- * @see eu.etaxonomy.taxeditor.ui.forms.AbstractCdmEntityWizardPage#checkComplete()
- */
@Override
protected void checkComplete() {
setPageComplete(true);
}
- /* (non-Javadoc)
- * @see eu.etaxonomy.taxeditor.forms.AbstractCdmEntityWizardPage#createElement(eu.etaxonomy.taxeditor.forms.ICdmFormElement)
- */
@Override
public AbstractCdmDetailElement<DerivedUnitFacade> createElement(ICdmFormElement rootElement) {
FieldUnitDetailElement detailElement = formFactory.createFieldUnitDetailElement(rootElement);
*/
public class GatheringEventWizardPage extends AbstractCdmEntityWizardPage<DerivedUnitFacade> {
- /**
- * @param formFactory
- * @param conversation
- * @param entity
- */
public GatheringEventWizardPage(CdmFormFactory formFactory,
ConversationHolder conversation, DerivedUnitFacade entity) {
super(formFactory, conversation, entity);
setPageComplete(true);
}
- /* (non-Javadoc)
- * @see eu.etaxonomy.taxeditor.ui.forms.AbstractCdmEntityWizardPage#checkComplete()
- */
@Override
protected void checkComplete() {
setPageComplete(true);
}
- /* (non-Javadoc)
- * @see eu.etaxonomy.taxeditor.forms.AbstractCdmEntityWizardPage#createElement(eu.etaxonomy.taxeditor.forms.ICdmFormElement)
- */
@Override
public AbstractCdmDetailElement<DerivedUnitFacade> createElement(ICdmFormElement rootElement) {
GatheringEventDetailElement detailElement = formFactory.createGatheringEventDetailElement(rootElement);
--- /dev/null
+// $Id$
+/**
+* Copyright (C) 2007 EDIT
+* European Distributed Institute of Taxonomy
+* http://www.e-taxonomy.eu
+*
+* The contents of this file are subject to the Mozilla Public License Version 1.1
+* See LICENSE.TXT at the top of this package for the full license terms.
+*/
+
+package eu.etaxonomy.taxeditor.ui.section.occurrence;
+
+import java.util.Collection;
+
+import eu.etaxonomy.cdm.api.conversation.ConversationHolder;
+import eu.etaxonomy.cdm.model.description.PolytomousKey;
+import eu.etaxonomy.cdm.model.location.NamedArea;
+import eu.etaxonomy.taxeditor.ui.dialog.selection.NamedAreaSelectionDialog;
+import eu.etaxonomy.taxeditor.ui.element.CdmFormFactory;
+import eu.etaxonomy.taxeditor.ui.element.ICdmFormElement;
+import eu.etaxonomy.taxeditor.ui.section.AbstractEntityCollectionSection;
+
+/**
+ *
+ * @author pplitzner
+ * @date Sep 21, 2015
+ *
+ */
+public class GeoScopePolyKeyDetailSection extends AbstractEntityCollectionSection<PolytomousKey, NamedArea> {
+
+ public GeoScopePolyKeyDetailSection(CdmFormFactory formFactory,
+ ConversationHolder conversation, ICdmFormElement parentElement, int style) {
+ super(formFactory, conversation, parentElement, "Geo Scopes", style);
+ }
+
+ /** {@inheritDoc} */
+ @Override
+ public Collection<NamedArea> getCollection(PolytomousKey entity) {
+ return entity.getGeographicalScope();
+ }
+
+ /** {@inheritDoc} */
+ @Override
+ public NamedArea createNewElement() {
+ NamedArea selection = NamedAreaSelectionDialog.select(getLayoutComposite().getShell(), getConversationHolder(), null);
+
+ return selection;
+ }
+
+ /** {@inheritDoc} */
+ @Override
+ public void addElement(NamedArea element) {
+ getEntity().addGeographicalScope(element);
+ }
+
+ /** {@inheritDoc} */
+ @Override
+ public void removeElement(NamedArea element) {
+ getEntity().removeGeographicalScope(element);
+ }
+
+ /** {@inheritDoc} */
+ @Override
+ public String getEmptyString() {
+ return "No geo scopes yet.";
+ }
+
+ /** {@inheritDoc} */
+ @Override
+ protected String getTooltipString() {
+ return "Add a geo scope";
+ }
+
+}
getEntity().setGeneticAccessionNumber(textGeneticAccessNo.getText());
if(textGeneticAccessNo.getText()!=null && !textGeneticAccessNo.getText().isEmpty()){
try {
- textNCBIUri.setUri(getEntity().getGenBankUri());
- textENAUri.setUri(getEntity().getEmblUri());
- textDDBJUri.setUri(getEntity().getDdbjUri());
+ textNCBIUri.setParsedText(getEntity().getGenBankUri());
+ textENAUri.setParsedText(getEntity().getEmblUri());
+ textDDBJUri.setParsedText(getEntity().getDdbjUri());
} catch (URISyntaxException e) {
textGeneticAccessNo.setBackground(getColor(Resources.COLOR_PARSE_ERROR));
}
getEntity().setBoldProcessId(textBoldProcessID.getText());
if(textBoldProcessID.getText()!=null && !textBoldProcessID.getText().isEmpty()){
try {
- textBoldUri.setUri(getEntity().getBoldUri());
+ textBoldUri.setParsedText(getEntity().getBoldUri());
} catch (URISyntaxException e) {
textBoldProcessID.setBackground(getColor(Resources.COLOR_PARSE_ERROR));
}
getEntity().setAbbrevTitle(text_abbrevTitle.getText());
toggleableAbbrevCache.setText(text_abbrevTitle.getText());
} else if (eventSource == text_uri) {
- getEntity().setUri(text_uri.getUri());
+ getEntity().setUri(text_uri.parseText());
} else if (eventSource == text_volume) {
getEntity().setVolume(text_volume.getText());
}
.createEnumComboElement(OriginalSourceType.class,
formElement, style);
super.createControls(formElement, style);
- text_idInSource = formFactory.createTextWithLabelElement(formElement, "Id In Source", null, style);
+ text_idInSource = formFactory.createTextWithLabelElement(formElement, "ID in Source", null, style);
text_idNamespace = formFactory.createTextWithLabelElement(formElement, "ID Namespace", null, style);
text_originaleNameString = formFactory.createTextWithLabelElement(
formElement, "Original Name", null, SWT.NULL);
} else if (eventSource == text_description) {\r
getEntity().getRepresentation(Language.getDefaultLanguage()).setText(text_description.getText());\r
} else if (eventSource == uri_uri) {\r
- getEntity().setUri(uri_uri.getUri());\r
+ getEntity().setUri(uri_uri.parseText());\r
} else if (eventSource == text_abbreviatedLabel) {\r
getEntity().getRepresentation(Language.getDefaultLanguage()).setAbbreviatedLabel(text_abbreviatedLabel.getText());\r
} else if (eventSource == timePeriod_validPeriod) {\r
handleRepresentation(eventSource);\r
\r
if (eventSource == uri_uri) {\r
- getEntity().setUri(uri_uri.getUri());\r
+ getEntity().setUri(uri_uri.parseText());\r
} else if (eventSource == uri_uriTermSource) {\r
- getEntity().setTermSourceUri(uri_uriTermSource.getUri());\r
+ getEntity().setTermSourceUri(uri_uriTermSource.parseText());\r
}\r
}\r
\r
* See LICENSE.TXT at the top of this package for the full license terms.
*/
-package eu.etaxonomy.taxeditor;
+package eu.etaxonomy.taxeditor.util;
import org.eclipse.core.runtime.Platform;
import org.osgi.framework.Bundle;
/**
* Prefix to declare the version as beta
*/
- private static final String BETA_PREFIX = "[Beta]";
+ private static final String BETA_PREFIX = "[REMOTING]";
+ public static String getTitle() {
+ return "EDIT Taxonomic Editor " + ApplicationUtil.getVersion();
+ }
/**
* @return
*/
public static boolean isStable() {
return !getVersion().startsWith("[");
}
- /**
- * <p>getPluginId</p>
- *
- * @return a {@link java.lang.String} object.
- */
- public static String getPluginId(){
- return TaxonomicEditorPlugin.PLUGIN_ID;
- }
-
}
--- /dev/null
+// $Id$
+/**
+* Copyright (C) 2015 EDIT
+* European Distributed Institute of Taxonomy
+* http://www.e-taxonomy.eu
+*
+* The contents of this file are subject to the Mozilla Public License Version 1.1
+* See LICENSE.TXT at the top of this package for the full license terms.
+*/
+package eu.etaxonomy.taxeditor.util;
+
+import java.util.ArrayList;
+import java.util.List;
+import java.util.UUID;
+
+import eu.etaxonomy.cdm.model.common.CdmBase;
+
+/**
+ * @author cmathew
+ * @date 29 Jun 2015
+ *
+ */
+public class OperationsUtil {
+
+ public static List<UUID> convertToUuidList(List<CdmBase> cdmBaseList) {
+ List<UUID> uuids = new ArrayList<UUID>();
+ for(CdmBase cdmBase : cdmBaseList) {
+ if(cdmBase == null) {
+ uuids.add(null);
+ } else {
+ uuids.add(cdmBase.getUuid());
+ }
+ }
+ return uuids;
+ }
+}
// $Id$
/**
-* Copyright (C) 2007 EDIT
-* European Distributed Institute of Taxonomy
-* http://www.e-taxonomy.eu
-*
-* The contents of this file are subject to the Mozilla Public License Version 1.1
-* See LICENSE.TXT at the top of this package for the full license terms.
-*/
+ * Copyright (C) 2007 EDIT
+ * European Distributed Institute of Taxonomy
+ * http://www.e-taxonomy.eu
+ *
+ * The contents of this file are subject to the Mozilla Public License Version 1.1
+ * See LICENSE.TXT at the top of this package for the full license terms.
+ */
package eu.etaxonomy.taxeditor.view;
+import java.util.Arrays;
+import java.util.List;
+import java.util.Map;
+
import org.eclipse.jface.viewers.ISelection;
import org.eclipse.jface.viewers.IStructuredSelection;
import org.eclipse.jface.viewers.StructuredSelection;
import eu.etaxonomy.taxeditor.model.AbstractUtility;
import eu.etaxonomy.taxeditor.model.IDirtyMarkable;
import eu.etaxonomy.taxeditor.operation.IPostOperationEnabled;
+import eu.etaxonomy.taxeditor.session.ICdmEntitySession;
+import eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled;
/**
* <p>Abstract AbstractCdmViewPart class.</p>
* @created Jun 15, 2010
* @version 1.0
*/
-public abstract class AbstractCdmViewPart extends ViewPart implements ISelectionListener, IPostOperationEnabled, IConversationEnabled, IDirtyMarkable{
+public abstract class AbstractCdmViewPart extends ViewPart implements ISelectionListener, IPostOperationEnabled, IConversationEnabled, ICdmEntitySessionEnabled, IDirtyMarkable{
- protected ISelectionService selectionService;
+ protected ISelectionService selectionService;
- public static IStructuredSelection EMPTY_SELECTION = new StructuredSelection();
+ public static IStructuredSelection EMPTY_SELECTION = new StructuredSelection();
- protected IWorkbenchPart part;
+ protected IWorkbenchPart part;
private PageBook pageBook;
- private Label emptySelectionLabel;
+ private Label emptySelectionLabel;
- private Composite viewerComposite;
+ private Composite viewerComposite;
- /** {@inheritDoc} */
- @Override
- public void createPartControl(Composite parent) {
- selectionService = getSite().getWorkbenchWindow().getSelectionService();
- selectionService.addSelectionListener(this);
+ /** {@inheritDoc} */
+ @Override
+ public void createPartControl(Composite parent) {
+ selectionService = getSite().getWorkbenchWindow().getSelectionService();
+ selectionService.addSelectionListener(this);
- pageBook = new PageBook(parent, SWT.NULL);
- //create viewerComposite
- viewerComposite = new SashForm(pageBook, SWT.HORIZONTAL);
- createViewer(viewerComposite);
+ pageBook = new PageBook(parent, SWT.NULL);
+ //create viewerComposite
+ viewerComposite = new SashForm(pageBook, SWT.HORIZONTAL);
+ createViewer(viewerComposite);
- // Page 2: Nothing selected
+ // Page 2: Nothing selected
emptySelectionLabel = new Label(pageBook, SWT.TOP + SWT.LEFT + SWT.WRAP);
setInitialSelection();
- }
-
- /**
- *
- */
- private void setInitialSelection() {
- selectionChanged(AbstractUtility.getActivePart(), getInitialSelection());
- }
-
- /**
-
* <p>getInitialSelection</p>
- *
- * @return a {@link org.eclipse.jface.viewers.ISelection} object.
- */
- protected ISelection getInitialSelection() {
- return selectionService.getSelection();
- }
-
- /**
- */
- public void showEmptyPage(){
- pageBook.showPage(emptySelectionLabel);
- }
+ }
+
+ /**
+ *
+ */
+ private void setInitialSelection() {
+ selectionChanged(AbstractUtility.getActivePart(), getInitialSelection());
+ }
+
+ /**
+ * <p>getInitialSelection</p>
+ *
+ * @return a {@link org.eclipse.jface.viewers.ISelection} object.
+ */
+ protected ISelection getInitialSelection() {
+ return selectionService.getSelection();
+ }
+
+ /**
+ * <p>showEmptyPage</p>
+ */
+ public void showEmptyPage(){
+ pageBook.showPage(emptySelectionLabel);
+ }
/**
* <p>showViewer</p>
* @param selection a {@link org.eclipse.jface.viewers.ISelection} object.
*/
public void showViewer(IWorkbenchPart part, IStructuredSelection selection){
- this.part = part;
+ this.part = part;
- Object element = selection.getFirstElement();
+ Object element = selection.getFirstElement();
- getViewer().setInput(element);
+ getViewer().setInput(element);
- showViewer();
+ showViewer();
}
/**
*/
public abstract Viewer getViewer();
- /**
- * <p>showViewer</p>
- */
- public void showViewer(){
- pageBook.showPage(viewerComposite);
- }
-
- public void setEnabled(boolean enabled){
- pageBook.setEnabled(enabled);
- }
-
- /** {@inheritDoc} */
- @Override
- public void setFocus() {
- if(getConversationHolder() != null){
- getConversationHolder().bind();
- }
- getViewer().getControl().setFocus();
- }
-
- /**
- * <p>createViewer</p>
- *
- * @param parent a {@link org.eclipse.swt.widgets.Composite} object.
- */
- public abstract void createViewer(Composite parent);
-
- /** {@inheritDoc} */
- @Override
+ /**
+ * <p>showViewer</p>
+ */
+ public void showViewer(){
+ pageBook.showPage(viewerComposite);
+ }
+
+ public void setEnabled(boolean enabled){
+ pageBook.setEnabled(enabled);
+ }
+
+ /** {@inheritDoc} */
+ @Override
+ public void setFocus() {
+ if(getConversationHolder() != null){
+ getConversationHolder().bind();
+ }
+ if(getCdmEntitySession() != null){
+ getCdmEntitySession().bind();
+ }
+ getViewer().getControl().setFocus();
+ }
+
+ /**
+ * <p>createViewer</p>
+ *
+ * @param parent a {@link org.eclipse.swt.widgets.Composite} object.
+ */
+ public abstract void createViewer(Composite parent);
+
+ /** {@inheritDoc} */
+ @Override
public boolean postOperation(CdmBase objectAffectedByOperation) {
- changed(objectAffectedByOperation);
- return true;
- }
+ changed(objectAffectedByOperation);
+ return true;
+ }
- /** {@inheritDoc} */
- @Override
+ /** {@inheritDoc} */
+ @Override
public abstract void changed(Object object);
- /**
-
* <p>getConversationHolder</p>
- *
- * @return a {@link eu.etaxonomy.cdm.api.conversation.ConversationHolder} object.
- */
- @Override
+ /**
+ * <p>getConversationHolder</p>
+ *
+ * @return a {@link eu.etaxonomy.cdm.api.conversation.ConversationHolder} object.
+ */
+ @Override
public ConversationHolder getConversationHolder() {
- if(part != null && part instanceof IConversationEnabled) {
+ if(part != null && part instanceof IConversationEnabled) {
return ((IConversationEnabled) part).getConversationHolder();
}
- return null;
- }
+ return null;
+ }
+
+ @Override
+ public ICdmEntitySession getCdmEntitySession() {
+ if(part != null && part instanceof ICdmEntitySessionEnabled) {
+ return ((ICdmEntitySessionEnabled) part).getCdmEntitySession();
+ }
+ return null;
+ }
+
+ @Override
+ public List<CdmBase> getRootEntities() {
+ return Arrays.asList((CdmBase)getViewer().getInput());
+ }
- /** {@inheritDoc} */
- @Override
+ /** {@inheritDoc} */
+ @Override
public void update(CdmDataChangeMap changeEvents) {
- }
-
- /** {@inheritDoc} */
- @Override
- public void dispose() {
- selectionService.removeSelectionListener(this);
- super.dispose();
- }
-
- /* (non-Javadoc)
- * @see eu.etaxonomy.taxeditor.model.IDirtyMarkableSelectionProvider#forceDirty()
- */
- @Override
- public void forceDirty() {
- changed(null);
- }
+ }
+
+ /** {@inheritDoc} */
+ @Override
+ public void dispose() {
+ selectionService.removeSelectionListener(this);
+ super.dispose();
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.model.IDirtyMarkableSelectionProvider#forceDirty()
+ */
+ @Override
+ public void forceDirty() {
+ changed(null);
+ }
+
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled#getPropertyPathsMap()
+ */
+ @Override
+ public Map<Object, List<String>> getPropertyPathsMap() {
+ // TODO Auto-generated method stub
+ return null;
+ }
}
import java.util.LinkedHashSet;
import java.util.List;
import java.util.Set;
-import java.util.UUID;
import org.eclipse.jface.viewers.ITreeContentProvider;
import org.eclipse.jface.viewers.TreeNode;
import org.eclipse.jface.viewers.Viewer;
-import eu.etaxonomy.cdm.api.service.IOccurrenceService;
import eu.etaxonomy.cdm.model.molecular.DnaSample;
import eu.etaxonomy.cdm.model.molecular.Sequence;
import eu.etaxonomy.cdm.model.molecular.SingleRead;
import eu.etaxonomy.cdm.model.occurrence.DerivedUnit;
import eu.etaxonomy.cdm.model.occurrence.SpecimenOrObservationBase;
import eu.etaxonomy.cdm.model.occurrence.SpecimenOrObservationType;
-import eu.etaxonomy.taxeditor.store.CdmStore;
public class DerivateContentProvider implements ITreeContentProvider {
+ List<TreeNode> rootNodes;
+
@Override
public void dispose() {
// TODO Auto-generated method stub
}
+ public List<SpecimenOrObservationBase> getRootElements() {
+ List<SpecimenOrObservationBase> elements = new ArrayList<SpecimenOrObservationBase>();
+
+ if(rootNodes != null) {
+ for(TreeNode node : rootNodes) {
+ elements.add((SpecimenOrObservationBase)node.getValue());
+ }
+ }
+ return elements;
+ }
+
@Override
public void inputChanged(Viewer viewer, Object oldInput, Object newInput) {
}
@Override
public Object[] getElements(Object inputElement) {
- List<TreeNode> rootElements = new ArrayList<TreeNode>();
+ rootNodes = new ArrayList<TreeNode>();
if(inputElement instanceof Set){
for (Object o: (Set)inputElement) {
- if(o instanceof UUID){
- UUID uuid = (UUID)o;
- SpecimenOrObservationBase<?> rootElement = CdmStore.getService(IOccurrenceService.class).load(uuid);
+ if(o instanceof SpecimenOrObservationBase){
+ SpecimenOrObservationBase<?> rootElement = (SpecimenOrObservationBase<?>)o;
if(rootElement!=null){
- rootElements.add(new TreeNode(rootElement));
+ rootNodes.add(new TreeNode(rootElement));
}
}
}
}
- return rootElements.toArray();
+ return rootNodes.toArray();
}
@Override
import org.hibernate.LazyInitializationException;
import eu.etaxonomy.cdm.api.conversation.ConversationHolder;
-import eu.etaxonomy.cdm.api.service.IOccurrenceService;
import eu.etaxonomy.cdm.hibernate.HibernateProxyHelper;
import eu.etaxonomy.cdm.model.common.CdmBase;
import eu.etaxonomy.cdm.model.common.DefinedTerm;
FieldUnit fieldUnit = (FieldUnit)derivate;
if(fieldUnit.getGatheringEvent()!=null){
GatheringEvent gatheringEvent = fieldUnit.getGatheringEvent();
- if(CdmStore.getService(IOccurrenceService.class).exists(fieldUnit.getUuid()) && !conversation.getSession().contains(gatheringEvent)){
- fieldUnit = (FieldUnit) CdmStore.getService(IOccurrenceService.class).load(fieldUnit.getUuid());
- gatheringEvent = fieldUnit.getGatheringEvent();
- }
label += gatheringEvent.getCountry()!=null?gatheringEvent.getCountry().getLabel()+separator:emptyString;
label += gatheringEvent.getLocality()!=null?gatheringEvent.getLocality().getText()+separator:emptyString;
label += gatheringEvent.getGatheringDate()!=null?gatheringEvent.getGatheringDate()+separator:emptyString;
else if(derivate instanceof DerivedUnit){
DerivedUnit derivedUnit = (DerivedUnit)derivate;
if(derivedUnit.getRecordBasis()==SpecimenOrObservationType.PreservedSpecimen){
- java.util.Collection<FieldUnit> fieldUnits = CdmStore.getService(IOccurrenceService.class).getFieldUnits(derivedUnit.getUuid());
- if(fieldUnits!=null && !fieldUnits.isEmpty()){
- FieldUnit fieldUnit = fieldUnits.iterator().next();
- GatheringEvent gatheringEvent = fieldUnit.getGatheringEvent();
-// gatheringEvent = HibernateProxyHelper.deproxy(gatheringEvent, GatheringEvent.class);
- if(gatheringEvent!=null){
- label += gatheringEvent.getCollector()!=null?gatheringEvent.getCollector()+separator:emptyString;
+ //java.util.Collection<FieldUnit> fieldUnits = CdmStore.getService(IOccurrenceService.class).getFieldUnits(derivedUnit.getUuid());
+ //TODO : This is not generic anymore for performance reasons
+ Set<SpecimenOrObservationBase> originals = derivedUnit.getOriginals();
+ if(originals.size() ==1) {
+ SpecimenOrObservationBase specimen = originals.iterator().next();
+ if(specimen instanceof FieldUnit) {
+ FieldUnit fieldUnit = (FieldUnit)specimen;
+ GatheringEvent gatheringEvent = fieldUnit.getGatheringEvent();
+ if(gatheringEvent!=null){
+ label += gatheringEvent.getCollector()!=null?gatheringEvent.getCollector()+separator:emptyString;
+ }
+ label += fieldUnit.getFieldNumber()!=null?fieldUnit.getFieldNumber()+separator:emptyString;
}
- label += fieldUnit.getFieldNumber()!=null?fieldUnit.getFieldNumber()+separator:emptyString;
}
+
eu.etaxonomy.cdm.model.occurrence.Collection collection = derivedUnit.getCollection();
if(collection!=null){
label += collection.getCode()!=null?"("+collection.getCode()+")"+separator:emptyString;
}
- String mostSignificantIdentifier = CdmStore.getService(IOccurrenceService.class).getMostSignificantIdentifier(derivedUnit);
+ String mostSignificantIdentifier = derivedUnit.getMostSignificantIdentifier();
label += mostSignificantIdentifier!=null?mostSignificantIdentifier+separator:emptyString;
}
else if(derivedUnit.getRecordBasis()==SpecimenOrObservationType.TissueSample){
boolean hasCharacterData = false;
if(cdmBase.isInstanceOf(SpecimenOrObservationBase.class)){
SpecimenOrObservationBase<?> specimen = HibernateProxyHelper.deproxy(cdmBase, SpecimenOrObservationBase.class);
- if(!CdmStore.getService(IOccurrenceService.class).getCharacterDataForSpecimen(specimen).isEmpty()){
+ if(specimen.hasCharacterData()){
hasCharacterData = true;
}
}
*/
package eu.etaxonomy.taxeditor.view.derivateSearch;
+import java.util.Collection;
+import java.util.List;
+import java.util.Map;
+
import org.eclipse.core.runtime.IProgressMonitor;
import org.eclipse.jface.action.MenuManager;
import org.eclipse.swt.widgets.Composite;
import org.eclipse.ui.part.ViewPart;
import eu.etaxonomy.cdm.api.conversation.ConversationHolder;
+import eu.etaxonomy.cdm.model.common.CdmBase;
import eu.etaxonomy.cdm.model.occurrence.SpecimenOrObservationBase;
import eu.etaxonomy.taxeditor.model.IContextListener;
+import eu.etaxonomy.taxeditor.session.ICdmEntitySession;
+import eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled;
import eu.etaxonomy.taxeditor.store.CdmStore;
/**
* This view allows to search for and filter {@link SpecimenOrObservationBase}s and display
* the results in a list. The results can be selected and opened in an editor.
*/
-public class DerivateSearchView extends ViewPart implements IContextListener {
+public class DerivateSearchView extends ViewPart implements IContextListener, ICdmEntitySessionEnabled {
public static final String ID = "eu.etaxonomy.taxeditor.view.derivateSearch.DerivateSearchView";
private DerivateSearchCompositeController derivateSearchCompositeController;
private ConversationHolder conversationHolder;
+ private ICdmEntitySession cdmEntitySession;
/**
* Constructs a new DerivateSearchView and registers it to listen to context changes
@Override
public void createPartControl(Composite parent) {
+
derivateSearchCompositeController = new DerivateSearchCompositeController(parent, this);
getSite().setSelectionProvider(derivateSearchCompositeController.getResultViewer());
derivateSearchCompositeController.setEnabled(CdmStore.isActive());
if(getConversationHolder()!=null && !getConversationHolder().isClosed() && !getConversationHolder().isBound()){
getConversationHolder().bind();
}
+ if(getCdmEntitySession() != null) {
+ getCdmEntitySession().bind();
+ }
}
@Override
@Override
public void contextRefresh(IProgressMonitor monitor) {
initConversation();
+ initSession();
+ }
+
+ private void initSession() {
+ if(CdmStore.isActive()) {
+ cdmEntitySession = CdmStore.getCurrentSessionManager().newSession(this, true);
+ }
}
private void initConversation(){
return conversationHolder;
}
- /**
- * {@inheritDoc}
- */
+
@Override
public void dispose() {
if(conversationHolder!=null){
conversationHolder.close();
}
+
+ if(cdmEntitySession != null) {
+ cdmEntitySession.dispose();
+ }
+ super.dispose();
+ }
+
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled#getCdmEntitySession()
+ */
+ @Override
+ public ICdmEntitySession getCdmEntitySession() {
+ initSession();
+ return cdmEntitySession;
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled#getRootEntities()
+ */
+ @Override
+ public <T extends CdmBase> Collection<T> getRootEntities() {
+ // TODO Auto-generated method stub
+ return null;
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled#getPropertyPathsMap()
+ */
+ @Override
+ public Map<Object, List<String>> getPropertyPathsMap() {
+ // TODO Auto-generated method stub
+ return null;
}
}
import eu.etaxonomy.taxeditor.ui.section.identifier.IdentifierDetailSection;
import eu.etaxonomy.taxeditor.ui.section.key.PolytomousKeyDetailSection;
import eu.etaxonomy.taxeditor.ui.section.key.PolytomousKeyNodeDetailSection;
-import eu.etaxonomy.taxeditor.ui.section.key.TaxonomicScopeSection;
import eu.etaxonomy.taxeditor.ui.section.name.NameRelationshipDetailSection;
import eu.etaxonomy.taxeditor.ui.section.name.NomenclaturalStatusSection;
import eu.etaxonomy.taxeditor.ui.section.name.NonViralNameDetailSection;
private ISelection selection;
- /**
- * <p>
- * Constructor for DetailsViewer.
- * </p>
- *
- * @param parent
- * a {@link org.eclipse.swt.widgets.Composite} object.
- * @param viewPart
- * a {@link eu.etaxonomy.taxeditor.view.AbstractCdmViewPart}
- * object.
- */
public DetailsViewer(Composite parent, AbstractCdmViewPart viewPart) {
super(parent, viewPart);
}
}
- /**
- * @param rootElement
- */
private void createEmptySection(RootElement parent) {
destroySections();
addPart(emptySection);
}
- /**
- * @param rootElement
- */
private void createGroupSection(RootElement parent) {
destroySections();
addPart(grantedAuthorityDetailSection);
}
- /*
- * (non-Javadoc)
- *
- * @see org.eclipse.jface.viewers.Viewer#getSelection()
- */
/** {@inheritDoc} */
@Override
public ISelection getSelection() {
}
}
- /**
- * createTaxonSections(RootElement parent)
- *
- * @param parent
- */
private void createTaxonSections(RootElement parent) {
destroySections();
addPart(nameRelationshipSection);
}
-
addPart(parsingMessagesSection);
addPart(taxonBaseDetailSection);
addPart(nonViralNameSection);
addPart(referenceDetailSection);
}
- /**
- * createNameSections
- *
- * @param parent
- */
private void createNameSections(RootElement parent) {
destroySections();
NonViralNameDetailSection nonViralNameSection = formFactory.createNonViralNameDetailSection(getConversationHolder(), parent, this,
}
}
- /**
- * createReferenceSections
- *
- * @param parent
- */
private void createReferenceSections(RootElement parent) {
destroySections();
addPart(referenceDetailSection);
}
- /**
- * createTeamOrPersonBaseDetailSection
- *
- * @param parent
- */
private void createTeamOrPersonBaseDetailSection(RootElement parent) {
destroySections();
TeamOrPersonBaseDetailSection teamOrPersonBaseDetailSection = formFactory.createTeamOrPersonBaseDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
addPart(teamOrPersonBaseDetailSection);
}
- /**
- * createTeamDetailSection
- *
- * @param parent
- */
private void createTeamDetailSection(RootElement parent) {
destroySections();
TeamDetailSection teamDetailSection = formFactory.createTeamDetailSection(getConversationHolder(), parent, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
addPart(teamDetailSection);
}
- /**
- * createPersonDetailSection
- *
- * @param parent
- */
private void createPersonDetailSection(RootElement parent) {
destroySections();
PersonDetailSection personDetailSection = formFactory.createPersonDetailSection(getConversationHolder(), parent, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
addPart(personDetailSection);
}
- /**
- * createDescriptionElementSection
- *
- * @param parent
- */
private void createDescriptionElementSection(RootElement parent) {
destroySections();
addPart(descriptionElementMediaSection);
}
- /**
- * createDescriptionSection
- *
- * @param parent
- */
private void createDescriptionSection(RootElement parent) {
destroySections();
DescriptionDetailSection descriptionDetailSection = formFactory.createDescriptionDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
addPart(scopeSection);
}
- /**
- * createDescriptionSection
- *
- * @param parent
- */
private void createSpecimenDescriptionSection(RootElement parent) {
destroySections();
DescriptionDetailSection descriptionDetailSection = formFactory.createDescriptionDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
addPart(descriptionDetailSection);
}
- /**
- * Creates the use Description section
- *
- * @param parent
- */
private void createUseDescriptionSection(RootElement parent) {
destroySections();
DescriptionDetailSection descriptionDetailSection = formFactory.createDescriptionDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
}
-
- /**
- * @param rootElement
- */
private void createImageGallerySection(RootElement parent) {
destroySections();
DescriptionDetailSection descriptionDetailSection = formFactory.createDescriptionDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
addPart(descriptionDetailSection);
}
- /**
- * createMediaElementSection
- *
- * @param parent
- */
-
private void createMediaElementSection(RootElement parent) {
destroySections();
addPart(mediaDetailSection);
}
- /**
- * createDerivedUnitBaseElementSection
- *
- * @param parent
- */
private void createDerivedUnitBaseElementSection(RootElement parent) {
destroySections();
}
-
-
- /**
- * @param rootElement
- */
private void createFeatureDistributionSection(RootElement parent) {
destroySections();
addPart(featureDistributionSection);
}
- /**
- * createPolytomousKeyNodeSection
- *
- * @param parent
- */
private void createPolytomousKeyNodeSection(RootElement parent) {
destroySections();
- PolytomousKeyDetailSection polytomousKeyDetailSection = formFactory.createPolytomousKeyDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE | ExpandableComposite.COMPACT);
+ PolytomousKeyDetailSection polytomousKeyDetailSection = formFactory.createPolytomousKeyDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
formFactory.createHorizontalSeparator(parent, SWT.BORDER);
PolytomousKeyNodeDetailSection polytomousKeyNodeDetailSection = formFactory.createPolytomousKeyNodeDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
- formFactory.createHorizontalSeparator(parent, SWT.BORDER);
-
- TaxonomicScopeSection taxonomicScopeSection = formFactory.createTaxonomicScopeSection(getConversationHolder(), parent, ExpandableComposite.TWISTIE | ExpandableComposite.COMPACT);
-
addPart(polytomousKeyDetailSection);
addPart(polytomousKeyNodeDetailSection);
- addPart(taxonomicScopeSection);
}
- /**
- * create the UseRecordSection
- *
- * @param parent
- */
private void createUseRecordSection(RootElement parent) {
destroySections();
}
- /**
- * createUserSection
- *
- * @param parent
- */
private void createUserSection(RootElement parent) {
destroySections();
addPart(groupByUserDetailSection);
}
- /**
- * createTaxonRelationshipSection
- *
- * @param parent
- */
private void createTaxonRelationshipSection(RootElement parent) {
destroySections();
addPart(referencedEntityBaseDetailSection);
}
- /**
- * @param rootElement
- */
private void createTermVocabularySection(RootElement parent) {
destroySections();
addPart(termVocabularyDetailSection);
}
- /**
- * createDefinedTermSection
- *
- * @param parent
- */
private void createDefinedTermSection(RootElement parent) {
destroySections();
--- /dev/null
+// $Id$
+/**
+ * Copyright (C) 2015 EDIT
+ * European Distributed Institute of Taxonomy
+ * http://www.e-taxonomy.eu
+ *
+ * The contents of this file are subject to the Mozilla Public License Version 1.1
+ * See LICENSE.TXT at the top of this package for the full license terms.
+ */
+package eu.etaxonomy.taxeditor.view.sessions;
+
+import java.util.List;
+
+import net.sf.ehcache.Cache;
+import net.sf.ehcache.Element;
+
+import org.eclipse.jface.viewers.ILabelProvider;
+import org.eclipse.jface.viewers.ITreeContentProvider;
+import org.eclipse.jface.viewers.StyledCellLabelProvider;
+import org.eclipse.jface.viewers.StyledString;
+import org.eclipse.jface.viewers.TreeViewer;
+import org.eclipse.jface.viewers.Viewer;
+import org.eclipse.jface.viewers.ViewerCell;
+import org.eclipse.swt.SWT;
+import org.eclipse.swt.custom.SashForm;
+import org.eclipse.swt.events.SelectionAdapter;
+import org.eclipse.swt.events.SelectionEvent;
+import org.eclipse.swt.graphics.Image;
+import org.eclipse.swt.layout.GridData;
+import org.eclipse.swt.layout.GridLayout;
+import org.eclipse.swt.widgets.Button;
+import org.eclipse.swt.widgets.Composite;
+import org.eclipse.swt.widgets.Dialog;
+import org.eclipse.swt.widgets.Display;
+import org.eclipse.swt.widgets.Label;
+import org.eclipse.swt.widgets.Shell;
+import org.eclipse.swt.widgets.Text;
+import org.eclipse.ui.dialogs.FilteredTree;
+import org.eclipse.ui.dialogs.PatternFilter;
+import org.eclipse.wb.swt.SWTResourceManager;
+
+import eu.etaxonomy.taxeditor.remoting.cache.CdmModelFieldPropertyFromClass;
+import eu.etaxonomy.taxeditor.remoting.cache.CdmRemoteCacheManager;
+import eu.etaxonomy.taxeditor.remoting.cache.EntityCacherDebugResult;
+import eu.etaxonomy.taxeditor.remoting.cache.EntityCacherDebugResult.CdmEntityInfo;
+import eu.etaxonomy.taxeditor.session.ICdmEntitySession;
+import eu.etaxonomy.taxeditor.store.CdmStore;
+
+/**
+ * @author cmathew
+ * @date 17 Feb 2015
+ *
+ */
+public class InspectSessionsDialog extends Dialog {
+
+ protected Object result;
+ protected Shell shlInspectSessions;
+ private Text txtDebugInfo;
+ private Label lblDebugInformation;
+
+ private final Cache cdmlibModelCache;
+
+ private final ICdmEntitySession activeSession;
+
+ private TreeViewer treeViewer;
+ private Button btnClose;
+ EntityCacherDebugResult ecdr;
+ private SashForm sashForm;
+ private Composite compositeDebug;
+ /**
+ * Create the dialog.
+ * @param parent
+ * @param style
+ */
+ public InspectSessionsDialog(Shell parent, int style) {
+ super(parent, style);
+ setText("Inspect Active Session");
+ cdmlibModelCache = CdmRemoteCacheManager.getInstance().getCdmModelGetMethodsCache();
+ activeSession = CdmStore.getCurrentSessionManager().getActiveSession();
+ ecdr = activeSession.debug();
+ }
+
+ /**
+ * Open the dialog.
+ * @return the result
+ */
+ public Object open() {
+
+ createContents();
+ setDebugInfoText();
+ treeViewer.setContentProvider(new SessionsTreeContentProvider());
+ treeViewer.setLabelProvider(new SessionsTreeLabelProvider());
+ treeViewer.setInput(getRootElements());
+ shlInspectSessions.open();
+ shlInspectSessions.layout();
+ Display display = getParent().getDisplay();
+ while (!shlInspectSessions.isDisposed()) {
+ if (!display.readAndDispatch()) {
+ display.sleep();
+ }
+ }
+ return result;
+ }
+
+ /**
+ * Create contents of the dialog.
+ */
+ private void createContents() {
+ shlInspectSessions = new Shell(getParent(), SWT.DIALOG_TRIM | SWT.RESIZE);
+ shlInspectSessions.setSize(641, 631);
+ shlInspectSessions.setText("Inspect Sessions");
+ shlInspectSessions.setLayout(new GridLayout(1, false));
+
+ sashForm = new SashForm(shlInspectSessions, SWT.VERTICAL);
+ sashForm.setLayoutData(new GridData(SWT.FILL, SWT.FILL, true, true, 1, 1));
+
+ PatternFilter filter = new PatternFilter();
+ FilteredTree tree = new FilteredTree(sashForm, SWT.MULTI | SWT.H_SCROLL | SWT.BORDER
+ | SWT.V_SCROLL, filter, true);
+ treeViewer = tree.getViewer();
+ //treeViewer = new TreeViewer(sashForm, SWT.BORDER);
+ //Tree tree = treeViewer.getTree();
+
+ compositeDebug = new Composite(sashForm, SWT.NONE);
+ compositeDebug.setLayout(new GridLayout(1, false));
+
+ lblDebugInformation = new Label(compositeDebug, SWT.NONE);
+ lblDebugInformation.setAlignment(SWT.CENTER);
+ lblDebugInformation.setLayoutData(new GridData(SWT.CENTER, SWT.CENTER, true, false, 1, 1));
+ lblDebugInformation.setFont(SWTResourceManager.getFont("Ubuntu", 10, SWT.NORMAL));
+ lblDebugInformation.setText("Debug Information");
+
+ txtDebugInfo = new Text(compositeDebug, SWT.BORDER | SWT.READ_ONLY | SWT.H_SCROLL | SWT.V_SCROLL | SWT.CANCEL | SWT.MULTI);
+ txtDebugInfo.setLayoutData(new GridData(SWT.FILL, SWT.FILL, true, true, 1, 1));
+ sashForm.setWeights(new int[] {338, 184});
+
+ btnClose = new Button(shlInspectSessions, SWT.NONE);
+ btnClose.addSelectionListener(new SelectionAdapter() {
+ @Override
+ public void widgetSelected(SelectionEvent e) {
+ shlInspectSessions.dispose();
+ }
+ });
+ GridData gd_btnClose = new GridData(SWT.LEFT, SWT.CENTER, false, false, 1, 1);
+ gd_btnClose.widthHint = 70;
+ btnClose.setLayoutData(gd_btnClose);
+ btnClose.setText("Close");
+
+ }
+
+ private void setDebugInfoText() {
+ txtDebugInfo.setText(ecdr.toString());
+ }
+ private CdmEntityInfo[] getRootElements() {
+
+ List<CdmEntityInfo> rootElemnts = ecdr.getRootElements();
+ return rootElemnts.toArray(new CdmEntityInfo[rootElemnts.size()]);
+ }
+
+ class SessionsTreeContentProvider implements ITreeContentProvider {
+
+
+
+ /* (non-Javadoc)
+ * @see org.eclipse.jface.viewers.IContentProvider#dispose()
+ */
+ @Override
+ public void dispose() {
+
+ }
+
+ /* (non-Javadoc)
+ * @see org.eclipse.jface.viewers.IContentProvider#inputChanged(org.eclipse.jface.viewers.Viewer, java.lang.Object, java.lang.Object)
+ */
+ @Override
+ public void inputChanged(Viewer viewer, Object oldInput, Object newInput) {
+
+
+ }
+
+ /* (non-Javadoc)
+ * @see org.eclipse.jface.viewers.ITreeContentProvider#getElements(java.lang.Object)
+ */
+ @Override
+ public Object[] getElements(Object inputElement) {
+ return (CdmEntityInfo[])inputElement;
+ }
+
+ /* (non-Javadoc)
+ * @see org.eclipse.jface.viewers.ITreeContentProvider#getChildren(java.lang.Object)
+ */
+ @Override
+ public Object[] getChildren(Object parentElement) {
+ List<CdmEntityInfo> children = ((CdmEntityInfo)parentElement).getChildren();
+ return children.toArray();
+ }
+
+ /* (non-Javadoc)
+ * @see org.eclipse.jface.viewers.ITreeContentProvider#getParent(java.lang.Object)
+ */
+ @Override
+ public Object getParent(Object element) {
+ CdmEntityInfo cei = (CdmEntityInfo)element;
+ return cei.getParent();
+ }
+
+ /* (non-Javadoc)
+ * @see org.eclipse.jface.viewers.ITreeContentProvider#hasChildren(java.lang.Object)
+ */
+ @Override
+ public boolean hasChildren(Object element) {
+ List<CdmEntityInfo> children = ((CdmEntityInfo)element).getChildren();
+ if(children != null && !children.isEmpty()) {
+ return true;
+ } else {
+ return false;
+ }
+ }
+
+ public CdmModelFieldPropertyFromClass getFromCdmlibModelCache(String className) {
+ Element e = cdmlibModelCache.get(className);
+ if (e == null) {
+ return null;
+ } else {
+ return (CdmModelFieldPropertyFromClass) e.getObjectValue();
+ }
+ }
+
+ }
+
+ class SessionsTreeLabelProvider extends StyledCellLabelProvider implements ILabelProvider {
+
+ @Override
+ public void update(ViewerCell cell) {
+ CdmEntityInfo cei = (CdmEntityInfo)cell.getElement();
+ StyledString text = new StyledString();
+ if(cei != null) {
+ text.append(cei.getLabel());
+ }
+ cell.setText(text.toString());
+ cell.setStyleRanges(text.getStyleRanges());
+ super.update(cell);
+ }
+
+ /* (non-Javadoc)
+ * @see org.eclipse.jface.viewers.ILabelProvider#getImage(java.lang.Object)
+ */
+ @Override
+ public Image getImage(Object element) {
+ // TODO Auto-generated method stub
+ return null;
+ }
+
+ /* (non-Javadoc)
+ * @see org.eclipse.jface.viewers.ILabelProvider#getText(java.lang.Object)
+ */
+ @Override
+ public String getText(Object element) {
+ CdmEntityInfo cei = (CdmEntityInfo)element;
+ return cei.getLabel();
+ }
+ }
+}
+
+
--- /dev/null
+// $Id$
+/**
+ * Copyright (C) 2015 EDIT
+ * European Distributed Institute of Taxonomy
+ * http://www.e-taxonomy.eu
+ *
+ * The contents of this file are subject to the Mozilla Public License Version 1.1
+ * See LICENSE.TXT at the top of this package for the full license terms.
+ */
+package eu.etaxonomy.taxeditor.view.sessions;
+
+import java.text.DecimalFormat;
+import java.util.Collection;
+
+import net.sf.ehcache.Cache;
+import net.sf.ehcache.CacheManager;
+import net.sf.ehcache.statistics.LiveCacheStatistics;
+
+import org.eclipse.jface.action.IMenuManager;
+import org.eclipse.jface.action.IToolBarManager;
+import org.eclipse.swt.SWT;
+import org.eclipse.swt.events.SelectionAdapter;
+import org.eclipse.swt.events.SelectionEvent;
+import org.eclipse.swt.layout.GridData;
+import org.eclipse.swt.layout.GridLayout;
+import org.eclipse.swt.widgets.Button;
+import org.eclipse.swt.widgets.Composite;
+import org.eclipse.swt.widgets.Label;
+import org.eclipse.swt.widgets.Table;
+import org.eclipse.swt.widgets.TableColumn;
+import org.eclipse.swt.widgets.TableItem;
+import org.eclipse.swt.widgets.Text;
+import org.eclipse.ui.part.ViewPart;
+import org.eclipse.wb.swt.SWTResourceManager;
+
+import eu.etaxonomy.cdm.api.cache.CdmCacher;
+import eu.etaxonomy.taxeditor.model.AbstractUtility;
+import eu.etaxonomy.taxeditor.remoting.cache.CdmRemoteCacheManager;
+import eu.etaxonomy.taxeditor.session.ICdmEntitySession;
+import eu.etaxonomy.taxeditor.session.ICdmEntitySessionManager;
+import eu.etaxonomy.taxeditor.session.ICdmEntitySessionManagerObserver;
+import eu.etaxonomy.taxeditor.store.CdmStore;
+
+/**
+ * @author cmathew
+ * @date 16 Feb 2015
+ *
+ */
+public class SessionsViewPart extends ViewPart implements ICdmEntitySessionManagerObserver {
+
+ public static final String ID = "eu.etaxonomy.taxeditor.view.sessions.SessionsViewPart"; //$NON-NLS-1$
+ public static final String OPEN_INSPECT_SESSIONS_DIALOG_ID = "eu.etaxonomy.taxeditor.store.open.InspectSessionsDialog";
+ private Table tableSessions;
+
+ private final String[] titles = { "Owner", "In Memory", "On Disk"};
+
+ private final ICdmEntitySessionManager cdmEntitySessionManager;
+ private Text txtNoOfSessions;
+ private Text txtNoOfCaches;
+ private Text txtDefaultInMemory;
+ private Text txtCdmModelInMemory;
+ private Text txtCdmModelOnDisk;
+ private Text txtDefaultOnDisk;
+
+ public SessionsViewPart() {
+ this.cdmEntitySessionManager = CdmStore.getCurrentSessionManager();
+ if(cdmEntitySessionManager != null) {
+ cdmEntitySessionManager.addSessionObserver(this);
+ }
+ }
+
+ /**
+ * Create contents of the view part.
+ * @param parent
+ */
+ @Override
+ public void createPartControl(Composite parent) {
+ Composite container = new Composite(parent, SWT.NONE);
+ container.setLayout(new GridLayout(5, false));
+ {
+ Label lblNoOfSessions = new Label(container, SWT.NONE);
+ lblNoOfSessions.setFont(SWTResourceManager.getFont("Ubuntu", 10, SWT.NORMAL));
+ lblNoOfSessions.setAlignment(SWT.RIGHT);
+ GridData gd_lblNoOfSessions = new GridData(SWT.RIGHT, SWT.FILL, false, false, 1, 1);
+ gd_lblNoOfSessions.widthHint = 115;
+ gd_lblNoOfSessions.minimumHeight = 30;
+ lblNoOfSessions.setLayoutData(gd_lblNoOfSessions);
+ lblNoOfSessions.setText("No. of Sessions : ");
+ }
+ {
+ txtNoOfSessions = new Text(container, SWT.BORDER);
+ txtNoOfSessions.setEditable(false);
+ txtNoOfSessions.setBackground(SWTResourceManager.getColor(SWT.COLOR_TITLE_INACTIVE_BACKGROUND_GRADIENT));
+ GridData gd_txtNoOfSessions = new GridData(SWT.LEFT, SWT.CENTER, false, false, 1, 1);
+ gd_txtNoOfSessions.widthHint = 50;
+ txtNoOfSessions.setLayoutData(gd_txtNoOfSessions);
+ }
+ new Label(container, SWT.NONE);
+ new Label(container, SWT.NONE);
+ new Label(container, SWT.NONE);
+ {
+ Label lblNoOfCaches = new Label(container, SWT.CENTER);
+ lblNoOfCaches.setAlignment(SWT.RIGHT);
+ lblNoOfCaches.setFont(SWTResourceManager.getFont("Ubuntu", 10, SWT.NORMAL));
+ GridData gd_lblNoOfCaches = new GridData(SWT.RIGHT, SWT.CENTER, false, false, 1, 1);
+ gd_lblNoOfCaches.widthHint = 150;
+ lblNoOfCaches.setLayoutData(gd_lblNoOfCaches);
+ lblNoOfCaches.setText("No. of entity caches : ");
+ }
+ {
+ txtNoOfCaches = new Text(container, SWT.BORDER);
+ txtNoOfCaches.setEditable(false);
+ GridData gd_txtNoOfCaches = new GridData(SWT.LEFT, SWT.CENTER, false, false, 1, 1);
+ gd_txtNoOfCaches.widthHint = 50;
+ txtNoOfCaches.setLayoutData(gd_txtNoOfCaches);
+ }
+ new Label(container, SWT.NONE);
+ new Label(container, SWT.NONE);
+ new Label(container, SWT.NONE);
+
+ {
+ Label lblDefaultCache = new Label(container, SWT.CENTER);
+ lblDefaultCache.setLayoutData(new GridData(SWT.RIGHT, SWT.CENTER, false, false, 1, 1));
+ lblDefaultCache.setText("Default Cache, ");
+ lblDefaultCache.setFont(SWTResourceManager.getFont("Ubuntu", 10, SWT.NORMAL));
+ lblDefaultCache.setAlignment(SWT.RIGHT);
+ }
+ {
+ Label lblDefaultInMemory = new Label(container, SWT.CENTER);
+ lblDefaultInMemory.setText("in Memory : ");
+ lblDefaultInMemory.setFont(SWTResourceManager.getFont("Ubuntu", 10, SWT.NORMAL));
+ lblDefaultInMemory.setAlignment(SWT.RIGHT);
+ lblDefaultInMemory.setLayoutData(new GridData(SWT.RIGHT, SWT.CENTER, false, false, 1, 1));
+ }
+ {
+ txtDefaultInMemory = new Text(container, SWT.BORDER);
+ txtDefaultInMemory.setEditable(false);
+ GridData gd_txtDefaultInMemory = new GridData(SWT.LEFT, SWT.CENTER, false, false, 1, 1);
+ gd_txtDefaultInMemory.widthHint = 130;
+ txtDefaultInMemory.setLayoutData(gd_txtDefaultInMemory);
+ }
+ {
+ Label lblDefaultOnDisk = new Label(container, SWT.CENTER);
+ lblDefaultOnDisk.setLayoutData(new GridData(SWT.RIGHT, SWT.CENTER, false, false, 1, 1));
+ lblDefaultOnDisk.setText("on Disk : ");
+ lblDefaultOnDisk.setFont(SWTResourceManager.getFont("Ubuntu", 10, SWT.NORMAL));
+ lblDefaultOnDisk.setAlignment(SWT.RIGHT);
+ }
+ {
+ txtDefaultOnDisk = new Text(container, SWT.BORDER);
+ txtDefaultOnDisk.setEditable(false);
+ txtDefaultOnDisk.setText("");
+ GridData gd_txtDefaultOnDisk = new GridData(SWT.LEFT, SWT.CENTER, false, false, 1, 1);
+ gd_txtDefaultOnDisk.widthHint = 130;
+ txtDefaultOnDisk.setLayoutData(gd_txtDefaultOnDisk);
+ }
+ {
+ Label lblCdmModelCache = new Label(container, SWT.CENTER);
+ lblCdmModelCache.setLayoutData(new GridData(SWT.RIGHT, SWT.CENTER, false, false, 1, 1));
+ lblCdmModelCache.setText("CDM Model Cache, ");
+ lblCdmModelCache.setFont(SWTResourceManager.getFont("Ubuntu", 10, SWT.NORMAL));
+ lblCdmModelCache.setAlignment(SWT.RIGHT);
+ }
+ {
+ Label lblCdmModelInMemory = new Label(container, SWT.CENTER);
+ lblCdmModelInMemory.setText("in Memory : ");
+ lblCdmModelInMemory.setFont(SWTResourceManager.getFont("Ubuntu", 10, SWT.NORMAL));
+ lblCdmModelInMemory.setAlignment(SWT.RIGHT);
+ GridData gd_lblCdmModelInMemory = new GridData(SWT.RIGHT, SWT.CENTER, false, false, 1, 1);
+ gd_lblCdmModelInMemory.widthHint = 86;
+ lblCdmModelInMemory.setLayoutData(gd_lblCdmModelInMemory);
+ }
+ {
+ txtCdmModelInMemory = new Text(container, SWT.BORDER);
+ txtCdmModelInMemory.setEditable(false);
+ GridData gd_txtCdmModelInMemory = new GridData(SWT.LEFT, SWT.CENTER, false, false, 1, 1);
+ gd_txtCdmModelInMemory.widthHint = 130;
+ txtCdmModelInMemory.setLayoutData(gd_txtCdmModelInMemory);
+ }
+ {
+ Label lblCdmModelOnDisk = new Label(container, SWT.CENTER);
+ lblCdmModelOnDisk.setLayoutData(new GridData(SWT.RIGHT, SWT.CENTER, false, false, 1, 1));
+ lblCdmModelOnDisk.setText("on Disk : ");
+ lblCdmModelOnDisk.setFont(SWTResourceManager.getFont("Ubuntu", 10, SWT.NORMAL));
+ lblCdmModelOnDisk.setAlignment(SWT.RIGHT);
+ }
+ {
+ txtCdmModelOnDisk = new Text(container, SWT.BORDER);
+ txtCdmModelOnDisk.setEditable(false);
+ txtCdmModelOnDisk.setText("");
+ GridData gd_txtCdmModelOnDisk = new GridData(SWT.LEFT, SWT.CENTER, false, false, 1, 1);
+ gd_txtCdmModelOnDisk.widthHint = 130;
+ txtCdmModelOnDisk.setLayoutData(gd_txtCdmModelOnDisk);
+ }
+ {
+ Button btnRefresh = new Button(container, SWT.NONE);
+ btnRefresh.addSelectionListener(new SelectionAdapter() {
+ @Override
+ public void widgetSelected(SelectionEvent e) {
+ changed();
+ }
+ });
+ GridData gd_btnRefresh = new GridData(SWT.FILL, SWT.CENTER, false, false, 1, 1);
+ gd_btnRefresh.widthHint = 100;
+ btnRefresh.setLayoutData(gd_btnRefresh);
+ btnRefresh.setText("Refresh");
+ }
+ {
+ Button btnInspectActiveSession = new Button(container, SWT.NONE);
+ btnInspectActiveSession.addSelectionListener(new SelectionAdapter() {
+ @Override
+ public void widgetSelected(SelectionEvent e) {
+ AbstractUtility.executeCommand(OPEN_INSPECT_SESSIONS_DIALOG_ID, this, null);
+ }
+ });
+ btnInspectActiveSession.setLayoutData(new GridData(SWT.FILL, SWT.FILL, false, false, 2, 1));
+ btnInspectActiveSession.setText("Inspect Active Session");
+ }
+ new Label(container, SWT.NONE);
+ new Label(container, SWT.NONE);
+
+ {
+ tableSessions = new Table(container, SWT.BORDER | SWT.FULL_SELECTION);
+ GridData gd_tableSessions = new GridData(SWT.FILL, SWT.FILL, true, true, 5, 1);
+ gd_tableSessions.widthHint = 769;
+ tableSessions.setLayoutData(gd_tableSessions);
+ tableSessions.setHeaderVisible(true);
+ tableSessions.setLinesVisible(true);
+ }
+
+ createActions();
+ initializeToolBar();
+ initializeMenu();
+ }
+
+ /**
+ * Create the actions.
+ */
+ private void createActions() {
+
+
+ for (String title : titles) {
+ TableColumn column = new TableColumn(tableSessions, SWT.NULL);
+ column.setWidth(200);
+ column.setText(title);
+ }
+ changed();
+
+ }
+
+
+ @Override
+ public void changed() {
+ if(tableSessions.isDisposed()) {
+ return;
+ }
+ tableSessions.removeAll();
+ if(cdmEntitySessionManager != null) {
+ Collection<ICdmEntitySession> sessions = cdmEntitySessionManager.getSessions();
+ txtNoOfSessions.setText(String.valueOf(sessions.size()));
+ for(ICdmEntitySession session : sessions) {
+ if(session.getOwner() != null) {
+ TableItem item = new TableItem(tableSessions, SWT.NULL);
+ item.setText(session.getOwner().toString());
+ String activePrefix = "";
+ if(session.isActive()) {
+ activePrefix = "*";
+ }
+ item.setText(0, activePrefix + session.getOwner().toString());
+ LiveCacheStatistics cacheStatistics = session.getCacheStatistics();
+ item.setText(1, getInMemoryStats(cacheStatistics));
+ item.setText(2, getOnDiskStats(cacheStatistics));
+ }
+ }
+ for (int i=0; i<titles.length; i++) {
+ tableSessions.getColumn (i).pack ();
+ }
+ }
+
+ CdmRemoteCacheManager instance = CdmRemoteCacheManager.getInstance();
+ int cdmEnityCacheSize = CacheManager.create().getCacheNames().length;
+ txtNoOfCaches.setText(String.valueOf(cdmEnityCacheSize));
+
+ Cache defaultCache = CacheManager.create().getCache(CdmCacher.DEFAULT_CACHE_NAME);
+ txtDefaultInMemory.setText("");
+ txtDefaultOnDisk.setText("");
+ if(defaultCache != null) {
+ LiveCacheStatistics liveCacheStatistics = defaultCache.getLiveCacheStatistics();
+ txtDefaultInMemory.setText(getInMemoryStats(liveCacheStatistics));
+ txtDefaultOnDisk.setText(getOnDiskStats(liveCacheStatistics));
+ }
+
+ Cache cdmModelGetMethodsCache = instance.getCdmModelGetMethodsCache();
+ txtCdmModelInMemory.setText("");
+ txtCdmModelOnDisk.setText("");
+ if(cdmModelGetMethodsCache != null) {
+ LiveCacheStatistics liveCacheStatistics = cdmModelGetMethodsCache.getLiveCacheStatistics();
+ txtCdmModelInMemory.setText(getInMemoryStats(liveCacheStatistics));
+ txtCdmModelOnDisk.setText(getOnDiskStats(liveCacheStatistics));
+ }
+
+ }
+
+ private String getInMemoryStats(LiveCacheStatistics statistics) {
+ if(statistics != null) {
+ long localHeapSize = statistics.getLocalHeapSize();
+
+ long localHeapSizeInBytes = statistics.getLocalHeapSizeInBytes();
+ String localHeapSizeInBytesStr =
+ (new DecimalFormat("#.##")).format(localHeapSizeInBytes/1048576.0);
+ return String.valueOf(localHeapSize) + " objects / " + localHeapSizeInBytesStr + " Mb";
+ }
+ return "";
+ }
+
+ private String getOnDiskStats(LiveCacheStatistics statistics) {
+ if(statistics != null) {
+ long localDiskSize = statistics.getLocalDiskSize();
+
+ long localDiskSizeInBytes = statistics.getLocalDiskSizeInBytes();
+ String localDiskSizeInBytesStr =
+ (new DecimalFormat("#.##")).format(localDiskSizeInBytes/1048576.0);
+ return String.valueOf(localDiskSize) + " objects / " + localDiskSizeInBytesStr + " Mb";
+ }
+ return "";
+ }
+
+ /**
+ * Initialize the toolbar.
+ */
+ private void initializeToolBar() {
+ IToolBarManager toolbarManager = getViewSite().getActionBars().getToolBarManager();
+ }
+
+ /**
+ * Initialize the menu.
+ */
+ private void initializeMenu() {
+ IMenuManager menuManager = getViewSite().getActionBars().getMenuManager();
+ }
+
+ @Override
+ public void setFocus() {
+ // Set the focus
+ }
+
+}
// TODO Auto-generated method stub
return false;
}
-
-
}
+++ /dev/null
-### ************ APPENDER ***********************************###
-
-### direct log messages to stdout ###
-log4j.appender.stdout=org.apache.log4j.ConsoleAppender
-log4j.appender.stdout.Target=System.out
-log4j.appender.stdout.layout=org.apache.log4j.PatternLayout
-log4j.appender.stdout.layout.ConversionPattern=%d{ABSOLUTE} %5p %c{1}:%L - %m%n
-
-### direct messages to file hibernate.log ###
-log4j.appender.file=org.apache.log4j.FileAppender
-log4j.appender.file.File=taxeditor.log
-log4j.appender.file.layout=org.apache.log4j.PatternLayout
-log4j.appender.file.layout.ConversionPattern=%d{ABSOLUTE} %5p %c{1}:%L - %m%n
-
-### ************* LOG LEVELS *********************************###
-
-### set log levels - for more verbose logging change 'info' to 'debug' ###
-### levels: error, warn, debug, info
-log4j.rootLogger=INFO, stdout
-
-### set directory-specific levels below
-
-### basic level for editor directory
-log4j.logger.eu.etaxonomy.taxeditor = WARN, stdout
-
-log4j.logger.eu.etaxonomy.taxeditor.store = DEBUG, stdout
-
-### log level for conversation handler
-#log4j.logger.eu.etaxonomy.cdm.api.application = DEBUG, stdout
// $Id$
/**
* Copyright (C) 2007 EDIT
-* European Distributed Institute of Taxonomy
+* European Distributed Institute of Taxonomy
* http://www.e-taxonomy.eu
-*
+*
* The contents of this file are subject to the Mozilla Public License Version 1.1
* See LICENSE.TXT at the top of this package for the full license terms.
*/
import eu.etaxonomy.cdm.model.taxon.Taxon;
import eu.etaxonomy.taxeditor.operation.AbstractPostOperation;
import eu.etaxonomy.taxeditor.operation.IPostOperationEnabled;
+import eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled;
/**
* @author n.hoffmann
* @version 1.0
*/
public abstract class AbstractTaxeditorOperationTestBase {
-
+
public static final IUndoContext undoContext = null;
-
+
public static final IProgressMonitor monitor = null;
- public static final IAdaptable info = null;
+ public static final IAdaptable info = null;
public static final IPostOperationEnabled postOperation = null;
-
+ public static final ICdmEntitySessionEnabled cdmEntitySessionEnabled = null;
+
protected static AbstractPostOperation operation;
protected static Taxon taxon;
}
--- /dev/null
+// $Id$
+/**
+* Copyright (C) 2015 EDIT
+* European Distributed Institute of Taxonomy
+* http://www.e-taxonomy.eu
+*
+* The contents of this file are subject to the Mozilla Public License Version 1.1
+* See LICENSE.TXT at the top of this package for the full license terms.
+*/
+package eu.etaxonomy.taxeditor.store.operations;
+
+import org.eclipse.core.runtime.IAdaptable;
+import org.eclipse.core.runtime.IProgressMonitor;
+
+import eu.etaxonomy.cdm.api.application.CdmApplicationState;
+import eu.etaxonomy.cdm.api.application.CdmChangeEvent.Action;
+import eu.etaxonomy.cdm.api.service.ITestService;
+import eu.etaxonomy.cdm.api.service.UpdateResult;
+import eu.etaxonomy.cdm.api.service.dto.CdmEntityIdentifier;
+import eu.etaxonomy.taxeditor.operation.RemotingCdmUpdateOperation;
+
+/**
+ * @author cmathew
+ * @date 26 Jun 2015
+ *
+ */
+public class RemotingTestUpdateOperation extends RemotingCdmUpdateOperation {
+
+ private static String LABEL = "Test Operation";
+
+ private UpdateResult result;
+ private Exception exception;
+ private CdmEntityIdentifier cei;
+
+
+ /**
+ * @param label
+ * @param action
+ * @param source
+ * @param async
+ */
+ public RemotingTestUpdateOperation(UpdateResult result,
+ Object source,
+ boolean async) {
+ super(LABEL, Action.Update, source, async);
+ this.result = result;
+ }
+
+ public RemotingTestUpdateOperation(Exception exception,
+ Object source,
+ boolean async) {
+ super(LABEL, Action.Update, source, async);
+ this.exception = exception;
+ }
+
+ public RemotingTestUpdateOperation(CdmEntityIdentifier cei,
+ Object source,
+ boolean async) {
+ super(LABEL, Action.Update, source, async);
+ this.cei = cei;
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.operation.RemotingCdmUpdateOperation#doUpdateExecute(org.eclipse.core.runtime.IProgressMonitor, org.eclipse.core.runtime.IAdaptable)
+ */
+ @Override
+ protected UpdateResult doUpdateExecute(IProgressMonitor monitor, IAdaptable info) throws Exception {
+ ITestService testService = CdmApplicationState.getTestService();
+ if(result != null) {
+ return testService.returnResult(result);
+ } else if(exception != null) {
+ return testService.throwException(exception);
+ } else if(cei != null) {
+ return testService.addChild(cei);
+ }
+ return null;
+ }
+
+}
+++ /dev/null
-### ************ APPENDER ***********************************###
-
-### direct log messages to stdout ###
-log4j.appender.stdout=org.apache.log4j.ConsoleAppender
-log4j.appender.stdout.Target=System.out
-log4j.appender.stdout.layout=org.apache.log4j.PatternLayout
-log4j.appender.stdout.layout.ConversionPattern=%d{ABSOLUTE} %5p %c{1}:%L - %m%n
-
-### direct messages to file hibernate.log ###
-log4j.appender.file=org.apache.log4j.FileAppender
-log4j.appender.file.File=hibernate.log
-log4j.appender.file.layout=org.apache.log4j.PatternLayout
-log4j.appender.file.layout.ConversionPattern=%d{ABSOLUTE} %5p %c{1}:%L - %m%n
-
-
-### ************* LOG LEVELS *********************************###
-
-### set log levels - for more verbose logging change 'info' to 'debug' ###
-
-log4j.rootLogger=info, stdout, file
-
- ### *** CDM *** ###
-
-log4j.logger.eu.etaxonomy.cdm = info
-log4j.logger.eu.etaxonomy.cdm.database.init = warn
-#
-log4j.logger.eu.etaxonomy.cdm.model.common.init = warn
-#
-log4j.logger.eu.etaxonomy.cdm.test.integration = info
-log4j.logger.eu.etaxonomy.cdm.api.application = warn
-log4j.logger.eu.etaxonomy.cdm.api.service = info
-#log4j.logger.eu.etaxonomy.cdm.database.VocabularyStoreImpl = warn
-#
-log4j.logger.eu.etaxonomy.cdm.database = warn
-log4j.logger.eu.etaxonomy.cdm.persistence.dao.hibernate.common = warn
-
-
-
- ### *** SPRING ************ ###
-log4j.logger.org.springframework.transaction = warn
-log4j.logger.org.hibernate.engine.LoadContexts = warn
-log4j.logger.org.springframework.orm.hibernate3.SessionFactoryUtils = warn
-log4j.logger.org.springframework.orm.hibernate3 = warn
-log4j.logger.org.springframework.FileSystemXmlApplicationContext = warn;
-log4j.logger.org.springframework.core.io.support = warn
-
-
- ### ***HIBERNATE ************ ###
-
-log4j.logger.org.hibernate=warn
-
-### No warnings as thrown by SQLServer
-###log4j.logger.org.hibernate.cfg = warn
-
-### No warnings as thrown by SQLServer
-log4j.logger.org.hibernate.util.JDBCExceptionReporter = error
-
-### log HQL query parser activity
-#log4j.logger.org.hibernate.hql.ast.AST=debug
-
-### log just the SQL
-log4j.logger.org.hibernate.SQL=warn
-
-### log JDBC bind parameters ###
-log4j.logger.org.hibernate.type=warn
-
-### log schema export/update ###
-log4j.logger.org.hibernate.tool.hbm2ddl=warn
-
-### log HQL parse trees
-log4j.logger.org.hibernate.hql=debug
-log4j.logger.org.hibernate.hql.ast=warn
-
-### log cache activity ###
-#log4j.logger.org.hibernate.cache=debug
-
-### log transaction activity
-#log4j.logger.org.hibernate.transaction=debug
-
-### log JDBC resource acquisition
-log4j.logger.org.hibernate.jdbc=info
-
-### enable the following line if you want to track down connection ###
-### leakages when using DriverManagerConnectionProvider ###
-#log4j.logger.org.hibernate.connection.DriverManagerConnectionProvider=trace
-
-
- ### *** Profiling Logger ************ ###
-
-#log4j.logger.org.springframework.aop.interceptor.PerformanceMonitorInterceptor=TRACE, profiling
-### Profiling output
-#log4j.appender.profiling=org.apache.log4j.RollingFileAppender
-#log4j.appender.profiling.File=profiling.log
-#log4j.appender.profiling.MaxFileSize=1024KB
-#log4j.appender.profiling.MaxBackupIndex=1
-#log4j.appender.profiling.layout=org.apache.log4j.PatternLayout
-#log4j.appender.profiling.layout.conversionPattern=%d,%p,%m%n
-
<classpath>
<classpathentry kind="con" path="org.eclipse.jdt.launching.JRE_CONTAINER/org.eclipse.jdt.internal.debug.ui.launcher.StandardVMType/JavaSE-1.6"/>
<classpathentry kind="con" path="org.eclipse.pde.core.requiredPlugins"/>
- <classpathentry kind="src" path="src/test/java"/>
- <classpathentry kind="src" path="src/main/resources"/>
+ <classpathentry including="**/*.java" kind="src" path="src/test/java"/>
+ <classpathentry excluding="**/*.java" kind="src" path="src/test/resources"/>
+ <classpathentry exported="true" kind="lib" path="lib/byte-buddy-0.5.1.jar"/>
+ <classpathentry exported="true" kind="lib" path="lib/org.springframework.context-3.2.2.RELEASE.jar"/>
+ <classpathentry exported="true" kind="lib" path="lib/unitils-core-3.4.2.jar"/>
+ <classpathentry exported="true" kind="lib" path="lib/unitils-database-3.4.2.jar"/>
+ <classpathentry exported="true" kind="lib" path="lib/unitils-dbmaintainer-3.4.2.jar"/>
+ <classpathentry exported="true" kind="lib" path="lib/unitils-dbunit-3.4.2.jar"/>
+ <classpathentry exported="true" kind="lib" path="lib/unitils-spring-3.4.2.jar"/>
+ <classpathentry exported="true" kind="lib" path="lib/dbunit-2.4.9.jar"/>
<classpathentry kind="output" path="target/classes"/>
</classpath>
-<?xml version="1.0" encoding="UTF-8"?>
<projectDescription>
- <name>eu.etaxonomy.taxeditor.test</name>
- <comment></comment>
- <projects>
- </projects>
- <buildSpec>
- <buildCommand>
- <name>org.eclipse.jdt.core.javabuilder</name>
- <arguments>
- </arguments>
- </buildCommand>
- <buildCommand>
- <name>org.eclipse.pde.ManifestBuilder</name>
- <arguments>
- </arguments>
- </buildCommand>
- <buildCommand>
- <name>org.eclipse.pde.SchemaBuilder</name>
- <arguments>
- </arguments>
- </buildCommand>
- </buildSpec>
- <natures>
- <nature>org.eclipse.pde.PluginNature</nature>
- <nature>org.eclipse.jdt.core.javanature</nature>
- </natures>
-</projectDescription>
+ <name>eu.etaxonomy.taxeditor.test</name>
+ <comment>Holds all UI tests for the Taxonomic Editor. NO_M2ECLIPSE_SUPPORT: Project files created with the maven-eclipse-plugin are not supported in M2Eclipse.</comment>
+ <projects/>
+ <buildSpec>
+ <buildCommand>
+ <name>org.eclipse.jdt.core.javabuilder</name>
+ </buildCommand>
+ </buildSpec>
+ <natures>
+ <nature>org.eclipse.jdt.core.javanature</nature>
+ <nature>org.eclipse.pde.PluginNature</nature>
+ </natures>
+</projectDescription>
\ No newline at end of file
-#Wed Oct 05 13:31:15 CEST 2011
eclipse.preferences.version=1
org.eclipse.jdt.core.compiler.codegen.inlineJsrBytecode=enabled
org.eclipse.jdt.core.compiler.codegen.targetPlatform=1.6
Bundle-ManifestVersion: 2
Bundle-Name: eu.etaxonomy.taxeditor.test
Bundle-SymbolicName: eu.etaxonomy.taxeditor.test;singleton:=true
-Bundle-Version: 3.6.1.qualifier
+Bundle-Version: 3.12.0.qualifier
Bundle-ActivationPolicy: lazy
Bundle-Vendor: EDIT
Bundle-RequiredExecutionEnvironment: JavaSE-1.6
-Require-Bundle: org.apache.log4j,
- org.eclipse.ui,
+Require-Bundle: org.eclipse.ui,
org.eclipse.core.runtime,
- org.eclipse.swtbot.eclipse.core,
- org.eclipse.swtbot.eclipse.finder,
- org.eclipse.swtbot.junit4_x,
org.eclipse.ui.ide,
- eu.etaxonomy.taxeditor.application,
- eu.etaxonomy.taxeditor.bulkeditor,
+ org.junit;bundle-version="4.8.2",
eu.etaxonomy.taxeditor.cdmlib,
+ eu.etaxonomy.taxeditor.bulkeditor,
eu.etaxonomy.taxeditor.editor,
eu.etaxonomy.taxeditor.help,
eu.etaxonomy.taxeditor.navigation,
eu.etaxonomy.taxeditor.printpublisher,
- eu.etaxonomy.taxeditor.store
-Eclipse-RegisterBuddy: org.apache.log4j
+ eu.etaxonomy.taxeditor.store,
+ org.apache.log4j,
+ org.hamcrest,
+ org.eclipse.swtbot.eclipse.core,
+ org.eclipse.swtbot.eclipse.finder
+Eclipse-RegisterBuddy: org.apache.log4j, org.eclipse.swtbot.swt.finder
+Bundle-ClassPath: .,
+ lib/byte-buddy-0.5.1.jar,
+ lib/org.springframework.context-3.2.2.RELEASE.jar,
+ lib/unitils-core-3.4.2.jar,
+ lib/unitils-database-3.4.2.jar,
+ lib/unitils-dbmaintainer-3.4.2.jar,
+ lib/unitils-dbunit-3.4.2.jar,
+ lib/unitils-spring-3.4.2.jar,
+ lib/dbunit-2.4.9.jar
\ No newline at end of file
-source.. = src/test/java/
+source.. = src/test/java/,\
+ src/test/resources/
bin.includes = META-INF/,\
- .
+ .,\
+ lib/byte-buddy-0.5.1.jar,\
+ lib/org.springframework.context-3.2.2.RELEASE.jar,\
+ lib/unitils-core-3.4.2.jar,\
+ lib/unitils-database-3.4.2.jar,\
+ lib/unitils-dbmaintainer-3.4.2.jar,\
+ lib/unitils-dbunit-3.4.2.jar,\
+ lib/unitils-spring-3.4.2.jar,\
+ lib/dbunit-2.4.9.jar,\
+ src/test/resources/
+output.. = target/classes
<?xml version="1.0" encoding="UTF-8"?>\r
<project>\r
\r
- <parent>\r
- <groupId>eu.etaxonomy</groupId>\r
- <artifactId>taxeditor-parent</artifactId>\r
- <version>3.4.0-SNAPSHOT</version>\r
- </parent>\r
- <modelVersion>4.0.0</modelVersion>\r
- <artifactId>eu.etaxonomy.taxeditor.test</artifactId>\r
- <packaging>eclipse-test-plugin</packaging>\r
- <name>UI Test Bundle</name>\r
- <description>Holds all UI tests for the Taxonomic Editor</description>\r
- <!-- <repositories> -->\r
- <!-- <repository> -->\r
- <!-- <id>ganymede</id> -->\r
- <!-- <layout>p2</layout> -->\r
- <!-- <url>http://download.eclipse.org/releases/galileo</url> -->\r
- <!-- </repository> -->\r
- <!-- <repository> -->\r
- <!-- <id>swtbot</id> -->\r
- <!-- <layout>p2</layout> -->\r
- <!-- <url>http://download.eclipse.org/technology/swtbot/galileo/dev-build/update-site</url> -->\r
- <!-- </repository> -->\r
- <!-- </repositories> -->\r
-\r
- <build>\r
- <plugins>\r
- <plugin>\r
- <groupId>org.eclipse.tycho</groupId>\r
- <artifactId>tycho-maven-plugin</artifactId>\r
- <version>${tycho.version}</version>\r
- <extensions>true</extensions>\r
- </plugin>\r
- <plugin>\r
- <groupId>org.eclipse.tycho</groupId>\r
- <artifactId>target-platform-configuration</artifactId>\r
- <version>${tycho.version}</version>\r
- <configuration>\r
- <resolver>p2</resolver>\r
- </configuration>\r
- </plugin>\r
- <plugin>\r
- <groupId>org.eclipse.tycho</groupId>\r
- <artifactId>tycho-surefire-plugin</artifactId>\r
- <version>${tycho.version}</version>\r
- <configuration>\r
- <useUIHarness>true</useUIHarness>\r
- <useUIThread>false</useUIThread>\r
- <includes>\r
- <include>**/*Test.java</include>\r
- </includes>\r
- <product>eu.etaxonomy.taxeditor.application.eu_etaxonomy_taxeditor_product</product>\r
- <application>eu.etaxonomy.taxeditor.application.application</application>\r
- <!-- <dependency>
- <type>p2-installable-unit</type>
- <artifactId>eu.etaxonomy.taxeditor.product</artifactId>
- <version>0.0.0</version>
- </dependency> -->\r
- </configuration>\r
- </plugin>\r
- <!-- <plugin>
- <groupId>org.eclipse.tycho</groupId>
- <artifactId>maven-osgi-test-plugin</artifactId>
- <version>${tycho.version}</version>
- <configuration>
- <useUIHarness>true</useUIHarness>
- <useUIThread>false</useUIThread>
- <product>eu.etaxonomy.taxeditor.application.eu_etaxonomy_taxeditor_product</product>
- <application>org.eclipse.ui.ide.workbench</application>
- <dependencies>
- <dependency>
- <type>p2-installable-unit</type>
- <artifactId>eu.etaxonomy.taxeditor.application.eu_etaxonomy_taxeditor_product</artifactId>
- <version>0.0.0</version>
- </dependency>
- </dependencies>
- </configuration>
- </plugin> -->\r
- </plugins>\r
- </build>\r
+ <parent>\r
+ <groupId>eu.etaxonomy</groupId>\r
+ <artifactId>taxeditor-parent</artifactId>\r
+ <version>3.12.0-SNAPSHOT</version>\r
+ </parent>\r
+ <modelVersion>4.0.0</modelVersion>\r
+ <artifactId>eu.etaxonomy.taxeditor.test</artifactId>\r
+ <packaging>eclipse-test-plugin</packaging>\r
+ <name>UI Test Bundle</name>\r
+ <description>Holds all Tests for the Taxonomic Editor</description>\r
+ <build>\r
+ <plugins>\r
+ <plugin>\r
+ <groupId>org.eclipse.tycho</groupId>\r
+ <artifactId>target-platform-configuration</artifactId>\r
+ <version>${tycho.version}</version>\r
+ <configuration>\r
+ <filters>\r
+ <!-- Work around for https://bugs.eclipse.org/bugs/show_bug.cgi?id=348045 -->\r
+ <!-- taken from https://wiki.eclipse.org/index.php?title=Tycho/Target_Platform#Filtering -->\r
+ <filter>\r
+ <type>p2-installable-unit</type>\r
+ <id>org.eclipse.equinox.servletbridge.extensionbundle</id>\r
+ <removeAll />\r
+ </filter>\r
+ </filters>\r
+ </configuration>\r
+ </plugin>\r
+ <plugin>\r
+ <groupId>org.eclipse.tycho</groupId>\r
+ <artifactId>tycho-surefire-plugin</artifactId>\r
+ <version>${tycho.version}</version>\r
+ <configuration>\r
+ <!-- currently we run only the non-ui unit tests so we don't the \r
+ harness -->\r
+ <!-- <useUIHarness>true</useUIHarness> -->\r
+ <dependencies>\r
+ <!-- This will pull the feature and its dependent plugins into \r
+ the classpath for the tests. Note that this requires ALL taxeditor projects \r
+ to be installed. -->\r
+ <dependency>\r
+ <type>eclipse-feature</type>\r
+ <artifactId>eu.etaxonomy.taxeditor.feature</artifactId>\r
+ <!-- This is the minimum required version -->\r
+ <version>1.0.0</version>\r
+ </dependency>\r
+ </dependencies>\r
+ </configuration>\r
+ </plugin>\r
+ <plugin>\r
+ <groupId>org.eclipse.jetty</groupId>\r
+ <artifactId>jetty-maven-plugin</artifactId>\r
+ <version>9.2.9.v20150224</version>\r
+ <configuration>\r
+ <jvmArgs>-Xmx512m -XX:MaxPermSize=512m</jvmArgs>\r
+ <systemProperties>\r
+ <systemProperty>\r
+ <name>spring.profiles.active</name>\r
+ <value>remoting</value>\r
+ </systemProperty>\r
+ <systemProperty>\r
+ <name>cdm.beanDefinitionFile</name>\r
+ <value>${basedir}/src/test/resources/datasources.xml</value>\r
+ </systemProperty>\r
+ <systemProperty>\r
+ <name>cdm.datasource</name>\r
+ <value>cdmTest</value>\r
+ </systemProperty>\r
+ </systemProperties>\r
+ <stopPort>9191</stopPort>\r
+ <stopKey>jetty-cdm-server</stopKey>\r
+ <stopWait>10</stopWait>\r
+ <httpConnector>\r
+ <port>9090</port>\r
+ </httpConnector>\r
+ <war>${project.parent.basedir}/eu.etaxonomy.taxeditor.cdmlib/src/main/resources/etc/jetty/cdmlib-remote-webapp.war</war>\r
+ <daemon>true</daemon>\r
+ </configuration>\r
+ <executions>\r
+ <execution>\r
+ <id>start-jetty</id>\r
+ <phase>pre-integration-test</phase>\r
+ <goals>\r
+ <goal>deploy-war</goal>\r
+ </goals>\r
+ <configuration>\r
+ <scanIntervalSeconds>0</scanIntervalSeconds>\r
+ </configuration>\r
+ </execution>\r
+ <execution>\r
+ <id>stop-jetty</id>\r
+ <phase>post-integration-test</phase>\r
+ <goals>\r
+ <goal>stop</goal>\r
+ </goals>\r
+ </execution>\r
+ </executions>\r
+ </plugin>\r
+ </plugins>\r
+ </build>\r
</project>
\ No newline at end of file
--- /dev/null
+httpPort=9090
+stopPort=9191
+stopKey=jetty-cdm-server
+user=admin
+password=00000
+
+++ /dev/null
-<?xml version="1.0" encoding="UTF-8" ?>
-<!DOCTYPE log4j:configuration SYSTEM "log4j.dtd">
-<log4j:configuration xmlns:log4j="http://jakarta.apache.org/log4j/"
- debug="false">
-
- <appender name="consoleAppender" class="org.apache.log4j.ConsoleAppender">
- <param name="Target" value="System.out" />
- <layout class="org.apache.log4j.PatternLayout">
- <param name="ConversionPattern"
- value="%d{dd MMM yyyy HH:mm:ss.SSS} - %25t - %-5p - %30c{1} - (%C{1}.java:%L) - %m%n" />
- </layout>
- </appender>
-
- <appender name="fileAppender" class="org.apache.log4j.FileAppender">
- <param name="File" value="/tmp/debug.log" />
- <param name="Append" value="false" />
- <layout class="org.apache.log4j.PatternLayout">
- <param name="ConversionPattern"
- value="%d{dd MMM yyyy HH:mm:ss.SSS} - %25t - %-5p - %30c{1} - (%C{1}.java:%L) - %m%n" />
- </layout>
- </appender>
-
- <appender name="asyncAppender" class="org.apache.log4j.AsyncAppender">
- <!-- appender-ref ref="consoleAppender" / -->
- <appender-ref ref="fileAppender" />
- </appender>
-
- <!-- don't log matchers, this is very high amount of chatter -->
- <category name="org.eclipse.swtbot.swt.finder.matchers">
- <priority value="OFF" />
- </category>
-
- <!--
- don't log widget notification events, this is moderately high chatter
- -->
- <category name="org.eclipse.swtbot.swt.finder.widgets">
- <priority value="OFF" />
- </category>
-
- <!-- don't log finders, this is moderate chatter -->
- <category name="org.eclipse.swtbot.swt.finder.finders">
- <priority value="DEBUG" />
- </category>
-
- <category name="org.eclipse.swtbot.swt.finder.keyboard">
- <!-- set to a value higher than debug to turn on. -->
- <priority value="DEBUG" />
- </category>
-
- <category name="org.eclipse.swtbot">
- <priority value="ALL" />
- </category>
-
- <root>
- <priority value="INFO" />
- <appender-ref ref="consoleAppender" />
- <appender-ref ref="fileAppender" />
- </root>
-
-</log4j:configuration>
\ No newline at end of file
--- /dev/null
+// $Id$
+/**
+* Copyright (C) 2014 EDIT
+* European Distributed Institute of Taxonomy
+* http://www.e-taxonomy.eu
+*
+* The contents of this file are subject to the Mozilla Public License Version 1.1
+* See LICENSE.TXT at the top of this package for the full license terms.
+*/
+package eu.etaxonomy.cdm.api.cache;
+
+import java.util.Arrays;
+import java.util.Iterator;
+import java.util.List;
+import java.util.Map;
+import java.util.Set;
+import java.util.UUID;
+
+import org.apache.log4j.Logger;
+import org.junit.Assert;
+import org.junit.BeforeClass;
+import org.junit.Test;
+import org.unitils.dbunit.annotation.DataSet;
+
+import eu.etaxonomy.cdm.api.service.ICommonService;
+import eu.etaxonomy.cdm.api.service.IPolytomousKeyNodeService;
+import eu.etaxonomy.cdm.api.service.IPolytomousKeyService;
+import eu.etaxonomy.cdm.api.service.ITaxonService;
+import eu.etaxonomy.cdm.model.common.CdmBase;
+import eu.etaxonomy.cdm.model.common.Language;
+import eu.etaxonomy.cdm.model.common.LanguageString;
+import eu.etaxonomy.cdm.model.description.KeyStatement;
+import eu.etaxonomy.cdm.model.description.PolytomousKey;
+import eu.etaxonomy.cdm.model.description.PolytomousKeyNode;
+import eu.etaxonomy.taxeditor.httpinvoker.RemotingSessionAwareTest;
+import eu.etaxonomy.taxeditor.remoting.cache.CdmTransientEntityCacher;
+
+/**
+ * @author cmathew
+ * @date 7 Oct 2014
+ *
+ */
+@DataSet
+public class CdmClientCachingTest extends RemotingSessionAwareTest {
+
+ private static final Logger logger = Logger.getLogger(CdmClientCachingTest.class);
+
+ private final UUID polytomousKeyUuid = UUID.fromString("0d53ba20-7de4-4baa-bd8a-401048447d66");
+ private final UUID taxon1Uuid = UUID.fromString("2b336df7-29e8-4f79-985f-66502739d22f");
+ private final UUID polytomousKeyNodeUuid1 = UUID.fromString("75e4c924-ff58-4ee7-a59d-fd9173517d08");
+ private final UUID polytomousKeyNodeUuid2 = UUID.fromString("b775c027-13c0-4b87-8aa9-712faeaafbdc");
+
+
+ private final IPolytomousKeyService polytomousKeyService = getRemoteApplicationController().getPolytomousKeyService();
+ private final IPolytomousKeyNodeService polytomousKeyNodeService = getRemoteApplicationController().getPolytomousKeyNodeService();
+ private final ICommonService commonService = getRemoteApplicationController().getCommonService();
+ private final ITaxonService taxonService = getRemoteApplicationController().getTaxonService();
+
+
+ private static final List<String> PKEY_DEPTH1_INIT_STRATEGY = Arrays.asList(new String[] {
+ });
+
+ private static final List<String> PKEY_DEPTH2_INIT_STRATEGY = Arrays.asList(new String[] {
+ "root"});
+
+ private static final List<String> PKEY_DEPTH3_INIT_STRATEGY = Arrays.asList(new String[] {
+ "root.statement"});
+
+
+ @BeforeClass
+ public static void initializePolytomousKeyTest() {
+
+ }
+
+
+
+
+ @Test
+ public void recursiveLoadSubGraphDepth1Test() {
+
+ // this call will load into the session cache the graph
+ // polytomous key
+ // |- root : polytomous key node
+ // in a recursive call
+ PolytomousKey pkey1 = CdmBase.deproxy(polytomousKeyService.load(polytomousKeyUuid, PKEY_DEPTH1_INIT_STRATEGY),PolytomousKey.class);
+
+
+ // checking to make sure the root object is in the session cache
+ Assert.assertSame(pkey1.getRoot(), cacher.getFromCache(pkey1.getRoot()));
+
+ }
+
+
+ @Test
+ public void recursiveLoadSubGraphDepth2Test() {
+
+ // this call will load into the session cache the graph
+ // polytomous key
+ // |- root : polytomous key node
+ // |- question : KeyStatement
+ // |- statement : KeyStatement
+ // in a recursive call
+ PolytomousKey pkey = CdmBase.deproxy(polytomousKeyService.load(polytomousKeyUuid, PKEY_DEPTH2_INIT_STRATEGY),PolytomousKey.class);
+ CdmTransientEntityCacher cacher = getCacher(sessionOwner);
+ // checking to make sure the root object is in the session cache
+ Assert.assertSame(pkey.getRoot(), cacher.getFromCache(pkey.getRoot()));
+ Assert.assertSame(pkey.getRoot().getStatement(), cacher.getFromCache(pkey.getRoot().getStatement()));
+ Assert.assertSame(pkey.getRoot().getQuestion(), cacher.getFromCache(pkey.getRoot().getQuestion()));
+
+ }
+
+ /**
+ * when : retrieving objects using recursive caching of object graphs with different depths
+ * then : the objects in the sub-graph having the same persistence id should be the same
+ */
+ @Test
+ public void lazyLoadRecursiveTest() {
+
+ // this call will load into the session cache the graph and update the objects in the sub-graph for a
+ // polytomous key
+ // |- root : polytomous key node
+ // |- question : KeyStatement
+ // |- statement : KeyStatement
+ PolytomousKey pkey1 = CdmBase.deproxy(polytomousKeyService.find(polytomousKeyUuid),PolytomousKey.class);
+
+ CdmTransientEntityCacher cacher = getCacher(sessionOwner);
+
+ }
+
+
+ /**
+ * when : retrieving objects using recursive caching of object graphs with different depths
+ * then : the objects in the sub-graph having the same persistence id should be the same
+ */
+ @Test
+ public void differentSubGraphDepthTest1() {
+
+ // this call will load into the session cache the graph and update the objects in the sub-graph for a
+ // polytomous key
+ // |- root : polytomous key node
+ // in a recursive call
+ PolytomousKey pkey1 = CdmBase.deproxy(polytomousKeyService.load(polytomousKeyUuid, PKEY_DEPTH1_INIT_STRATEGY),PolytomousKey.class);
+ KeyStatement ks1 = CdmBase.deproxy(pkey1.getRoot().getStatement(), KeyStatement.class);
+
+ CdmTransientEntityCacher cacher = getCacher(sessionOwner);
+
+ // this call will load into the session cache the graph and update the objects in the sub-graph for a
+ // polytomous key
+ // |- root : polytomous key node
+ // |- question : KeyStatement
+ // |- statement : KeyStatement
+ PolytomousKey pkey2 = CdmBase.deproxy(polytomousKeyService.load(polytomousKeyUuid, PKEY_DEPTH3_INIT_STRATEGY),PolytomousKey.class);
+
+ KeyStatement ks2 = CdmBase.deproxy(pkey2.getRoot().getStatement(), KeyStatement.class);
+
+ Assert.assertSame(ks2, cacher.getFromCache(ks2));
+ Assert.assertSame(cacher.getFromCache(KeyStatement.class, ks1.getId()), cacher.getFromCache(ks2));
+
+ }
+
+ /**
+ * when : retrieving objects using recursive caching of object graphs with different depths
+ * then : the objects in the sub-graph having the same persistence id should be the same
+ */
+ @Test
+ public void differentSubGraphDepthTest2() {
+
+ // this call will load into the session cache the graph and update the objects in the sub-graph for a
+ // polytomous key
+ // |- root : polytomous key node
+ // |- question : KeyStatement
+ // |- statement : KeyStatement
+ PolytomousKey pkey1 = CdmBase.deproxy(polytomousKeyService.load(polytomousKeyUuid, PKEY_DEPTH2_INIT_STRATEGY),PolytomousKey.class);
+ KeyStatement ks1 = pkey1.getRoot().getStatement();
+ Assert.assertSame(cacher.getFromCache(pkey1.getRoot().getStatement()), pkey1.getRoot().getStatement());
+ CdmTransientEntityCacher cacher = getCacher(sessionOwner);
+
+ // this call will load into the session cache the graph and update the objects in the sub-graph for a
+ // polytomous key
+ // |- root : polytomous key node
+ PolytomousKey pkey2 = CdmBase.deproxy(polytomousKeyService.load(polytomousKeyUuid, PKEY_DEPTH1_INIT_STRATEGY),PolytomousKey.class);
+
+ Assert.assertSame(pkey1.getRoot().getStatement(), pkey2.getRoot().getStatement());
+ pkey2.getRoot().getStatement().getCreatedBy();
+ Assert.assertSame(cacher.getFromCache(ks1), cacher.getFromCache(pkey2.getRoot().getStatement()));
+ }
+
+ /**
+ * when : retrieving objects using (first) recursive load directly and (second) lazy loading in the same session
+ * then : the objects in the sub-graph having the same persistence id should be the same
+ */
+ @Test
+ public void recursiveLoadAndLazyLoadTest() {
+
+ // this call will load into the session cache the graph and update the objects in the sub-graph for a
+ // polytomous key
+ // |- root : polytomous key node
+ // |- question : KeyStatement
+ // |- statement : KeyStatement
+ PolytomousKey pkey1 = CdmBase.deproxy(polytomousKeyService.load(polytomousKeyUuid, PKEY_DEPTH2_INIT_STRATEGY),PolytomousKey.class);
+
+
+ CdmTransientEntityCacher cacher = getCacher(sessionOwner);
+
+ // checking that the root is not null and
+ // that it exists in the cache and
+ // that both the original object and the
+ // cached object are the same
+ Assert.assertNotNull(pkey1.getRoot().getStatement());
+ Assert.assertNotNull(cacher.getFromCache(pkey1.getRoot().getStatement()));
+
+ // this call will load into the session cache the graph and update the objects in the sub-graph for a
+ // polytomous key
+ // |- root : polytomous key node
+ PolytomousKey pkey2 = CdmBase.deproxy(polytomousKeyService.find(polytomousKeyUuid),PolytomousKey.class);
+
+ KeyStatement ks2 = CdmBase.deproxy(pkey2.getRoot().getStatement(), KeyStatement.class);
+ Assert.assertSame(ks2, cacher.getFromCache(pkey2.getRoot().getStatement()));
+
+ Assert.assertSame(pkey1.getRoot().getStatement(), pkey2.getRoot().getStatement());
+ Assert.assertSame(cacher.getFromCache(pkey1.getRoot().getStatement()), cacher.getFromCache(pkey2.getRoot().getStatement()));
+ }
+
+ /**
+ * when : retrieving objects using (first) lazy loading and (second) recursive load directly in the same session
+ * then : the objects in the sub-graph having the same persistence id should be the same
+ */
+ @Test
+ public void lazyLoadAndRecursiveLoadTest() {
+
+
+ // this call will load into the session cache the graph and update the objects in the sub-graph for a
+ // polytomous key
+ // |- root : polytomous key node
+
+ PolytomousKey pkey1 = CdmBase.deproxy(polytomousKeyService.find(polytomousKeyUuid),PolytomousKey.class);
+
+
+ // lazy initialising root.statement
+ KeyStatement st = CdmBase.deproxy(pkey1.getRoot().getStatement(), KeyStatement.class);
+ st.getLabel();
+
+ // checking that the root is not null and
+ // that it exists in the cache and
+ // that both the original object and the
+ // cached object are the same
+ Assert.assertNotNull(pkey1.getRoot().getStatement());
+ Assert.assertSame(CdmBase.deproxy(pkey1.getRoot().getStatement(), KeyStatement.class),
+ cacher.getFromCache(pkey1.getRoot().getStatement(), KeyStatement.class));
+
+ // this call will load into the session cache the graph and update the objects in the sub-graph for a
+ // polytomous key
+ // |- root : polytomous key node
+ // |- question : KeyStatement
+ // |- statement : KeyStatement
+
+ PolytomousKey pkey2 = CdmBase.deproxy(polytomousKeyService.load(polytomousKeyUuid, PKEY_DEPTH2_INIT_STRATEGY),PolytomousKey.class);
+
+
+ Assert.assertSame(pkey2.getRoot().getStatement(), cacher.getFromCache(pkey2.getRoot().getStatement(), KeyStatement.class));
+ Assert.assertSame(st, pkey2.getRoot().getStatement());
+ Assert.assertSame(cacher.getFromCache(st), cacher.getFromCache(pkey2.getRoot().getStatement(), KeyStatement.class));
+ }
+
+
+
+
+
+ /**
+ * when : loading an object (first) and then (second) loading a graph the object is contained in, in the same session
+ * then : the object should be the same
+ */
+ @Test
+ public void subGraphObjectLoadTest1() {
+
+ // this call will load into the session cache a polytomous key node object
+ PolytomousKeyNode rootPKNode = CdmBase.deproxy(polytomousKeyNodeService.find(polytomousKeyNodeUuid1),PolytomousKeyNode.class);
+
+
+ Assert.assertNotNull(rootPKNode);
+ Assert.assertSame(rootPKNode, cacher.getFromCache(rootPKNode));
+
+ PolytomousKeyNode childOfRootPKNode = CdmBase.deproxy(polytomousKeyNodeService.find(polytomousKeyNodeUuid2),PolytomousKeyNode.class);
+
+
+ Assert.assertNotNull(childOfRootPKNode);
+ Assert.assertSame(childOfRootPKNode, cacher.getFromCache(childOfRootPKNode));
+
+ // this call will load into the session cache the graph and update the objects in the sub-graph for a
+ // polytomous key
+ // |- root : polytomous key node
+ // |- question : KeyStatement
+ // |- statement : KeyStatement
+
+ PolytomousKey pkey = CdmBase.deproxy(polytomousKeyService.load(polytomousKeyUuid, PKEY_DEPTH2_INIT_STRATEGY),PolytomousKey.class);
+
+
+ Assert.assertSame(childOfRootPKNode, cacher.getFromCache(childOfRootPKNode));
+ Assert.assertSame(pkey.getRoot().getChildAt(1), childOfRootPKNode);
+ }
+
+ /**
+ * when : loading a graph (first) and then (second) loading an object contained in in the graph, in the same session
+ * then : the object should be the same
+ */
+ @Test
+ public void subGraphObjectLoadTest2() {
+
+ // this call will load into the session cache the graph and update the objects in the sub-graph for a
+ // polytomous key
+ // |- root : polytomous key node
+ // |- question : KeyStatement
+ // |- statement : KeyStatement
+
+ PolytomousKey pkey = CdmBase.deproxy(polytomousKeyService.load(polytomousKeyUuid, PKEY_DEPTH2_INIT_STRATEGY),PolytomousKey.class);
+
+
+ // this call will load into the session cache a polytomous key node object
+ PolytomousKeyNode rootPKNode = CdmBase.deproxy(polytomousKeyNodeService.find(polytomousKeyNodeUuid1),PolytomousKeyNode.class);
+
+
+ Assert.assertNotNull(rootPKNode);
+ Assert.assertSame(rootPKNode, cacher.getFromCache(rootPKNode));
+
+ PolytomousKeyNode childOfRootPKNode = CdmBase.deproxy(polytomousKeyNodeService.find(polytomousKeyNodeUuid2),PolytomousKeyNode.class);
+
+
+ Assert.assertNotNull(childOfRootPKNode);
+ Assert.assertSame(childOfRootPKNode, cacher.getFromCache(childOfRootPKNode));
+
+ Assert.assertSame(childOfRootPKNode, cacher.getFromCache(childOfRootPKNode));
+ Assert.assertSame(pkey.getRoot().getChildAt(1), childOfRootPKNode);
+ }
+
+
+ /**
+ * when : loading objects from a collection
+ * then : the object stored in the cache should be the same
+ */
+ @Test
+ public void subGraphCollectionLoadTest() {
+
+ // this call will load into the session cache the graph and update the objects in the sub-graph for a
+ // polytomous key
+ // |- root : polytomous key node
+ // |- question : KeyStatement
+ // |- statement : KeyStatement
+
+ PolytomousKey pkey = CdmBase.deproxy(polytomousKeyService.load(polytomousKeyUuid, PKEY_DEPTH2_INIT_STRATEGY),PolytomousKey.class);
+
+
+ PolytomousKeyNode childOfRootPKNode = pkey.getRoot().getChildAt(1);
+
+ Assert.assertSame(childOfRootPKNode, cacher.getFromCache(childOfRootPKNode));
+ Assert.assertSame(pkey.getRoot().getChildAt(1), childOfRootPKNode);
+
+ }
+
+ /**
+ * when : loading a non-lazy collection in a subgraph and loading the collection directly
+ * then : the object stored in the cache should be the same as the object in the sub-graph collection and
+ * the object in the directly loaded collection
+ */
+ @Test
+ public void nonLazyCollectionLoadTest() {
+ // need to find an example of this
+ }
+
+ /**
+ * when : loading objects from a map
+ * then : the object stored in the cache should be the same
+ */
+ @Test
+ public void subGraphMapLoadTest() {
+
+ Language english = Language.getLanguageFromUuid(Language.uuidEnglish);
+ Language hindi = Language.getLanguageFromUuid(UUID.fromString("0a1d9d1d-135d-4575-b172-669b51673c39"));
+
+
+ // this call will load into the session cache the graph and update the objects in the sub-graph for a
+ // polytomous key
+ // |- root : polytomous key node
+ // |- question : KeyStatement
+ // |- statement : KeyStatement
+
+ PolytomousKey pkey = CdmBase.deproxy(polytomousKeyService.load(polytomousKeyUuid, PKEY_DEPTH3_INIT_STRATEGY),PolytomousKey.class);
+
+
+ Map<Language, LanguageString> labelMap = pkey.getRoot().getStatement().getLabel();
+ Set<Language> languages = labelMap.keySet();
+ Iterator<Language> languagesItr = languages.iterator();
+ while(languagesItr.hasNext()) {
+ Language lang = languagesItr.next();
+ if(lang.equals(english)) {
+ Assert.assertSame(lang, english);
+ }
+ if(lang.equals(hindi)) {
+ Assert.assertSame(lang, hindi);
+ }
+ Assert.assertSame(lang, cacher.getFromCache(lang));
+ }
+ }
+
+ /**
+ * when : loading a non-lazy map in a subgraph and loading the map directly
+ * then : the object stored in the cache should be the same as the object in the sub-graph map and
+ * the object in the directly loaded map
+ */
+ @Test
+ public void nonLazyMapLoadTest() {
+ // need to find an example of this
+ }
+
+
+
+}
package eu.etaxonomy.taxeditor.application.menu.general;\r
\r
import org.eclipse.swtbot.eclipse.finder.waits.Conditions;\r
+import org.junit.Ignore;\r
import org.junit.Test;\r
\r
import eu.etaxonomy.taxeditor.test.AbstractEditorTest;\r
\r
/**\r
* Open all "General -> New" menus\r
- * \r
+ *\r
* @author n.hoffmann\r
*\r
*/\r
+@Ignore\r
public class NewMenuTest extends AbstractEditorTest {\r
\r
@Test\r
openNewWizardFor("Taxon");\r
utils.cancel();\r
}\r
- \r
+\r
\r
@Test\r
public void canOpenNewWizardForReference(){\r
openNewWizardFor("Reference");\r
utils.cancel();\r
}\r
- \r
- \r
+\r
+\r
@Test\r
public void canOpenNewWizardForName(){\r
openNewWizardFor("Name");\r
utils.cancel();\r
}\r
- \r
- \r
+\r
+\r
@Test\r
public void canOpenNewWizardForTeam(){\r
openNewWizardFor("Team");\r
utils.cancel();\r
}\r
- \r
- \r
+\r
+\r
@Test\r
public void canOpenNewWizardForPerson(){\r
openNewWizardFor("Person");\r
utils.cancel();\r
}\r
- \r
+\r
@Test\r
public void canOpenNewWizardForSpecimen(){\r
openNewWizardFor("Specimen");\r
utils.cancel();\r
}\r
- \r
- \r
+\r
+\r
@Test\r
public void canOpenNewWizardForClassification(){\r
openNewWizardFor("Classification");\r
--- /dev/null
+/**
+ * Copyright (C) 2014 EDIT
+ * European Distributed Institute of Taxonomy
+ * http://www.e-taxonomy.eu
+ *
+ * The contents of this file are subject to the Mozilla Public License Version 1.1
+ * See LICENSE.TXT at the top of this package for the full license terms.
+ */
+package eu.etaxonomy.taxeditor.httpinvoker;
+
+import java.io.File;
+import java.io.FileInputStream;
+import java.io.InputStream;
+import java.lang.reflect.Field;
+import java.net.URL;
+import java.util.Map;
+import java.util.Properties;
+
+import net.sf.ehcache.CacheManager;
+
+import org.apache.log4j.Logger;
+import org.eclipse.core.runtime.FileLocator;
+import org.eclipse.core.runtime.Platform;
+import org.junit.Assert;
+import org.junit.BeforeClass;
+import org.osgi.framework.Bundle;
+import org.springframework.core.io.ClassPathResource;
+import org.springframework.core.io.Resource;
+import org.springframework.security.authentication.UsernamePasswordAuthenticationToken;
+import org.springframework.security.core.Authentication;
+import org.springframework.security.core.context.SecurityContextHolder;
+import org.springframework.security.core.context.SecurityContextImpl;
+import org.unitils.UnitilsJUnit4;
+import org.unitils.database.DatabaseUnitils;
+import org.unitils.database.annotations.Transactional;
+import org.unitils.database.util.TransactionMode;
+import org.unitils.spring.annotation.SpringApplicationContext;
+
+import eu.etaxonomy.cdm.api.application.CdmApplicationRemoteController;
+import eu.etaxonomy.cdm.api.application.CdmApplicationState;
+import eu.etaxonomy.cdm.api.application.CdmDataChangeService;
+import eu.etaxonomy.cdm.api.cache.CdmServiceCacher;
+import eu.etaxonomy.cdm.model.name.NomenclaturalCode;
+import eu.etaxonomy.taxeditor.remoting.cache.CdmRemoteCacheManager;
+import eu.etaxonomy.taxeditor.remoting.cache.CdmTransientEntityCacher;
+import eu.etaxonomy.taxeditor.remoting.source.CdmPersistentRemoteSource;
+import eu.etaxonomy.taxeditor.remoting.source.CdmRemoteSource;
+import eu.etaxonomy.taxeditor.remoting.source.CdmRemoteSourceException;
+import eu.etaxonomy.taxeditor.remoting.source.ICdmRemoteSource;
+import eu.etaxonomy.taxeditor.session.CdmEntitySession;
+import eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled;
+import eu.etaxonomy.taxeditor.session.ICdmEntitySessionManager;
+
+
+/**
+ * Base class for remoting tests, responsible for
+ * - starting / stop the cdm server
+ * - running some basic connection tests
+ * - setting up the remote configuration.
+ *
+ */
+@Transactional(TransactionMode.DISABLED)
+@SpringApplicationContext("file:./target/classes/eu/etaxonomy/cdm/testRemotingApplicationContext.xml")
+public abstract class BaseRemotingTest extends UnitilsJUnit4 {
+ private static final Logger logger = Logger.getLogger(BaseRemotingTest.class);
+
+
+ public static final Resource SERVER_PROPERTIES_FILE =
+ new ClassPathResource("server.properties");
+
+ private static ICdmRemoteSource cdmRemoteSource;
+ private static CdmPersistentRemoteSource remotePersistentSource;
+
+ public static boolean useManagedServer = true;
+
+
+ protected static ICdmEntitySessionManager cdmEntitySessionManager;
+
+ private final static String DEFAULT_USER = "admin";
+ private final static String DEFAULT_PASSWORD = "00000";
+
+ private static String userHomeKey = "user.home";
+
+ private static String user = DEFAULT_USER;
+ private static String password = DEFAULT_PASSWORD;
+
+ protected static CDMServer cdmServer;
+
+ @BeforeClass
+ public static void initializeBaseRemotingTest() {
+
+ DatabaseUnitils.disableConstraints();
+
+ try {
+ String userHomeDirPath;
+ Bundle bundle = Platform.getBundle("eu.etaxonomy.taxeditor.test");
+
+ URL userHomeDirURL = bundle.getEntry("src/test/resources");
+ File userHomeDir = new File(FileLocator.resolve(userHomeDirURL).toURI());
+ userHomeDirPath = userHomeDir.getAbsolutePath();
+
+ URL serverPropertiesURL = bundle.getEntry("src/test/resources/server.properties");
+ File serverPropertiesFile = new File(FileLocator.resolve(serverPropertiesURL).toURI());
+ InputStream inputStream = new FileInputStream(serverPropertiesFile);
+
+ Properties prop = new Properties();
+ if (inputStream != null) {
+ prop.load(inputStream);
+ inputStream.close();
+ }
+
+ logger.info("Setting user.home to " + userHomeDirPath);
+ System.setProperty(userHomeKey, userHomeDirPath);
+
+
+ cdmServer = new CDMServer("cdmTest", serverPropertiesURL);
+
+
+ if(prop.getProperty("user") != null) {
+ user = prop.getProperty("user");
+ }
+
+ if(prop.getProperty("password") != null) {
+ password = prop.getProperty("password");
+ }
+
+ initializeController(cdmServer.getName(),
+ cdmServer.getHost(),
+ cdmServer.getPort(),
+ cdmServer.getContextPath(),
+ NomenclaturalCode.ICNAFP,
+ user,
+ password);
+ } catch (Exception e) {
+ e.printStackTrace();
+ // Assert.fail("Server failed to start. Reason : " + e.getMessage());
+ }
+
+ logger.info("Emptying all caches (except model cache) ");
+ //emptyAllCachesExceptModelCache();
+ }
+
+ public static void emptyAllCachesExceptModelCache() {
+ CacheManager cm = CacheManager.create();
+ String[] cacheNames = CacheManager.create().getCacheNames();
+ for(String cacheName : cacheNames) {
+ if(!cacheName.equals(CdmRemoteCacheManager.CDM_MODEL_CACHE_NAME)) {
+ cm.removeCache(cacheName);
+ }
+ }
+ }
+
+
+ public static void initializeController(String sourceName, String host, int port, String contextPath, NomenclaturalCode ncode, String username, String password) {
+
+ if(CdmApplicationState.getCurrentAppConfig() != null) {
+ return;
+ }
+ cdmRemoteSource = CdmRemoteSource.NewInstance(sourceName, host, port, contextPath, ncode);
+ CdmApplicationRemoteController remoteApplicationController =
+ CdmApplicationRemoteController.NewInstance(cdmRemoteSource,
+ null,
+ null);
+ CdmApplicationState.setCurrentAppConfig(remoteApplicationController);
+ CdmApplicationState.setCdmServiceCacher(new CdmServiceCacher());
+ try {
+ remotePersistentSource = CdmPersistentRemoteSource.NewInstance(sourceName);
+ } catch (CdmRemoteSourceException e) {
+ Assert.fail("Default Remote Persistent Source failed to load. Reason : " + e.getMessage());
+ }
+ cdmEntitySessionManager = getRemoteApplicationController().getCdmEntitySessionManager();
+
+ CdmApplicationState.setCurrentDataChangeService(new CdmDataChangeService());
+
+ //FIXME:Remoting the authentication code should be replaced by a method call which actually
+ // does the authentication in the editor code so that the 'real' authentication can be tested
+ SecurityContextHolder.clearContext();
+ SecurityContextImpl sc = new SecurityContextImpl();
+ Authentication token = new UsernamePasswordAuthenticationToken(username,password);
+ Authentication authentication = getRemoteApplicationController().getAuthenticationManager().authenticate(token);
+ authentication = new UsernamePasswordAuthenticationToken(username,password, authentication.getAuthorities());
+ sc.setAuthentication(authentication);
+
+ SecurityContextHolder.setContext(sc);
+ CdmApplicationState.setCurrentSecurityContext(SecurityContextHolder.getContext());
+ }
+
+
+
+ protected static CdmApplicationRemoteController getRemoteApplicationController() {
+ return (CdmApplicationRemoteController) CdmApplicationState.getCurrentAppConfig();
+ }
+
+ protected static ICdmRemoteSource getCdmRemoteSource() {
+ return cdmRemoteSource;
+ }
+
+ protected static CdmPersistentRemoteSource getCdmPersistentRemoteSource() {
+ return remotePersistentSource;
+ }
+
+ protected static ICdmEntitySessionManager getCdmEntitySessionManager() {
+ return cdmEntitySessionManager;
+ }
+
+
+ protected static CdmEntitySession getSession(ICdmEntitySessionEnabled sessionOwner) {
+ Map<ICdmEntitySessionEnabled, CdmEntitySession> ownerSessionMap =
+ (Map<ICdmEntitySessionEnabled, CdmEntitySession>) getFieldValueViaReflection(cdmEntitySessionManager, "ownerSessionMap");
+ return ownerSessionMap.get(sessionOwner);
+ }
+
+ protected static CdmEntitySession getActiveSession() {
+ return (CdmEntitySession) getFieldValueViaReflection(cdmEntitySessionManager, "activeSession");
+ }
+
+ protected static CdmTransientEntityCacher getCacher(ICdmEntitySessionEnabled sessionOwner) {
+ return (CdmTransientEntityCacher) getFieldValueViaReflection(getSession(sessionOwner), "cdmTransientEntityCacher");
+ }
+
+
+ protected static Object getFieldValueViaReflection(Object object, String fieldName) {
+ Class<?> clazz = object.getClass();
+ try {
+ Field field = clazz.getDeclaredField(fieldName);
+ field.setAccessible(true);
+ return field.get(object);
+ } catch (NoSuchFieldException e) {
+ e.printStackTrace();
+ } catch (SecurityException e) {
+ e.printStackTrace();
+ } catch (IllegalArgumentException e) {
+ e.printStackTrace();
+ } catch (IllegalAccessException e) {
+ e.printStackTrace();
+ }
+ return null;
+ }
+
+
+
+
+}
--- /dev/null
+// $Id$
+/**
+ * Copyright (C) 2014 EDIT
+ * European Distributed Institute of Taxonomy
+ * http://www.e-taxonomy.eu
+ *
+ * The contents of this file are subject to the Mozilla Public License Version 1.1
+ * See LICENSE.TXT at the top of this package for the full license terms.
+ */
+package eu.etaxonomy.taxeditor.httpinvoker;
+
+import java.io.BufferedReader;
+import java.io.File;
+import java.io.FileInputStream;
+import java.io.FileNotFoundException;
+import java.io.IOException;
+import java.io.InputStream;
+import java.io.InputStreamReader;
+import java.net.URISyntaxException;
+import java.net.URL;
+import java.util.Properties;
+
+import javax.management.InstanceNotFoundException;
+import javax.management.MBeanException;
+import javax.management.MBeanServerConnection;
+import javax.management.MalformedObjectNameException;
+import javax.management.ObjectName;
+import javax.management.ReflectionException;
+import javax.management.remote.JMXConnector;
+import javax.management.remote.JMXConnectorFactory;
+import javax.management.remote.JMXServiceURL;
+import javax.sql.DataSource;
+
+import org.apache.log4j.Logger;
+import org.eclipse.core.runtime.FileLocator;
+import org.springframework.core.io.ClassPathResource;
+import org.springframework.core.io.Resource;
+import org.unitils.database.annotations.TestDataSource;
+
+import eu.etaxonomy.cdm.database.CdmPersistentDataSource;
+import eu.etaxonomy.cdm.database.ICdmDataSource;
+import eu.etaxonomy.taxeditor.remoting.server.CDMServerException;
+import eu.etaxonomy.taxeditor.remoting.source.CdmRemoteSourceBase;
+
+/**
+ *
+ * (Singleton) Server instance which manages a compatible cdmlib-webapp-war.
+ * This is done by launching a jetty instance (using jetty-runner) as an
+ * executed process. The choice of the external process over a more
+ * preferable 'embedded jetty' instance is due to problems arising from the
+ * class loading of classes (e.g. from hibernate core) which are needed
+ * for both the webapp as well as the remoting client.
+ *
+ * @author cmathew
+ * @date 23 Sep 2014
+ *
+ */
+
+public class CDMServer {
+
+ public static final Logger logger = Logger.getLogger(CDMServer.class);
+
+ @TestDataSource
+ protected DataSource dataSource;
+
+ private final String name = "default";
+ private final String host = "127.0.0.1";
+ private int httpPort = 9090;
+ private int stopPort = 9191;
+ private String stopKey = "jetty-cdm-server";
+ private final String contextPath = "";
+
+ public static final Resource DEFAULT_CDM_WEBAPP_RESOURCE =
+ new ClassPathResource("/etc/jetty/cdmlib-remote-webapp.war");
+
+ public static final Resource DEFAULT_DATASOURCE_FILE =
+ new ClassPathResource("datasources.xml");
+
+ public static final Resource DEFAULT_JETTY_RUNNER_RESOURCE =
+ new ClassPathResource("/etc/jetty/jetty-runner-9.2.3.v20140905.jar");
+
+ public static final Resource DEFAULT_JETTY_RESOURCE =
+ new ClassPathResource("/etc/jetty/start-9.2.3.v20140905.jar");
+
+ private static CDMServer cdmServer = null;
+ private static CDMServerException cdmse = null;
+
+ private boolean serverAlreadyRunning = false;
+
+ private File dataSourcesFile;
+ private final String dataSourceName;
+
+ public CDMServer(String dataSourceName, URL serverPropertiesURL) throws CDMServerException {
+ this.dataSourceName = dataSourceName;
+ Properties prop = new Properties();
+
+ try {
+ File serverPropertiesFile = new File(FileLocator.resolve(serverPropertiesURL).toURI());
+ InputStream inputStream = new FileInputStream(serverPropertiesFile);
+
+ prop.load(inputStream);
+ inputStream.close();
+
+ } catch (FileNotFoundException e) {
+ throw new CDMServerException(e);
+ } catch (URISyntaxException e) {
+ throw new CDMServerException(e);
+ } catch (IOException e) {
+ throw new CDMServerException(e);
+ }
+
+
+
+ if(prop.getProperty("httpPort") != null) {
+ setHttpPort(Integer.valueOf(prop.getProperty("httpPort")));
+ }
+
+ if(prop.getProperty("stopPort") != null) {
+ setStopPort(Integer.valueOf(prop.getProperty("stopPort")));
+ }
+
+ if(prop.getProperty("stopKey") != null) {
+ setStopKey(prop.getProperty("stopKey"));
+ }
+
+ }
+
+
+
+ public String getName() {
+ return name;
+ }
+
+ public String getHost() {
+ return host;
+ }
+
+ public int getPort() {
+ return httpPort;
+ }
+
+ public String getContextPath() {
+ return contextPath;
+ }
+
+ public void setHttpPort(int port) {
+ this.httpPort = port;
+ }
+
+ public void setStopPort(int stopPort) {
+ this.stopPort = stopPort;
+ }
+
+ public void setStopKey(String stopKey) {
+ this.stopKey = stopKey;
+ }
+
+
+ public static boolean isRunningInEclipse() {
+ return (System.getProperty("sun.java.command") != null &&
+ System.getProperty("sun.java.command").startsWith("org.eclipse.jdt.internal.junit.runner.RemoteTestRunner"));
+ }
+
+ private String getVMArgs() throws IOException {
+ StringBuilder sb = new StringBuilder();
+ sb.append(" -Dspring.profiles.active=remoting");
+ sb.append(" -Dcdm.beanDefinitionFile=" + DEFAULT_DATASOURCE_FILE.getFile().getAbsolutePath());
+ sb.append(" -Dcdm.datasource=cdmTest");
+ return sb.toString();
+ }
+
+ private String getStartServerArgs() throws IOException {
+ StringBuilder sb = new StringBuilder();
+ sb.append(" --port " + httpPort);
+ return sb.toString();
+ }
+
+ private String getStopServerSettings() {
+ StringBuilder sb = new StringBuilder();
+ sb.append(" --stop-port ");
+ sb.append(stopPort);
+ sb.append(" --stop-key ");
+ sb.append(stopKey);
+ return sb.toString();
+ }
+
+ private String getStopServerArgs() {
+ StringBuilder sb = new StringBuilder();
+ sb.append(" STOP.PORT=");
+ sb.append(stopPort);
+ sb.append(" STOP.KEY=");
+ sb.append(stopKey);
+ return sb.toString();
+ }
+
+
+ public void start() throws CDMServerException {
+
+ /**
+ * First check if the CDM server responds to a service request, which implies that
+ * the server has started properly. If no response is received then check if the
+ * server is listening on specific host / port, which implies that the server
+ * has started but incorrectly, in which case we try to force stop it (if we can)
+ * and start a new server.
+ */
+ if(isStarted(1)) {
+ logger.info("[CDM-Server] Server already running @ " + host + ":" + httpPort );
+ serverAlreadyRunning = true;
+ return;
+ }
+
+ Thread t = new Thread() {
+ @Override
+ public void run() {
+
+ StringBuffer output = new StringBuffer();
+ try{
+ Process p;
+ String command = "java "
+ + getVMArgs()
+ + " -jar "
+ + DEFAULT_JETTY_RUNNER_RESOURCE.getFile().getAbsolutePath()
+ + getStartServerArgs()
+ + getStopServerSettings()
+ + " "
+ + DEFAULT_CDM_WEBAPP_RESOURCE.getFile().getAbsolutePath();
+ logger.info("[CDM-Server] Starting server with Command : " + command);
+ p = Runtime.getRuntime().exec(command);
+
+ BufferedReader inpReader =
+ new BufferedReader(new InputStreamReader(p.getInputStream()));
+
+ BufferedReader errReader =
+ new BufferedReader(new InputStreamReader(p.getErrorStream()));
+
+ String line = "";
+ while ((line = inpReader.readLine())!= null) {
+ logger.info("[CDM-Server Start] : " + line);
+ }
+
+ while ((line = errReader.readLine())!= null) {
+ logger.info("[CDM-Server Start] : " + line);
+ }
+
+ } catch (Exception e) {
+ e.printStackTrace();
+ cdmse = new CDMServerException(e);
+ }
+ }
+ };
+
+ t.setDaemon(true);
+ cdmse = null;
+ t.start();
+
+ if(isStarted(50)) {
+ logger.info("[CDM-Server] Server running @ " + host + ":" + httpPort );
+ } else {
+ logger.info("[CDM-Server] Server not started within given interval");
+ // making sure to kill server if it is not started correctly
+ try {
+ stop(true);
+ } catch (Exception e) {
+ throw new CDMServerException("CDM Server could not be stopped : " + e.getMessage());
+ }
+ throw new CDMServerException("CDM Server not started : ");
+ }
+
+ }
+
+
+ public boolean isStarted(int checkingIntervals) throws CDMServerException {
+ CdmRemoteSourceBase crsb = new CdmRemoteSourceBase("local-cdm-server",
+ host,
+ httpPort,
+ contextPath,
+ null);
+ int intervalsCount = 0;
+ do {
+ try {
+ if(cdmse != null) {
+ return false;
+ }
+ boolean check = crsb.checkConnection();
+ if(check) {
+ logger.info("[CDM-Server] Running @ " + host + ":" + httpPort );
+ return true;
+ }
+ } catch (Exception e) {
+
+ }
+ try {
+ Thread.sleep(1000);
+ } catch (InterruptedException ie) {
+ throw new CDMServerException("Error checking CDM Server status", ie);
+ }
+ intervalsCount++;
+ } while (intervalsCount < checkingIntervals);
+ return false;
+ }
+
+ public void stop() throws Exception {
+ stop(false);
+ }
+
+ public void stop(boolean force) throws Exception {
+
+ if(!force) {
+ if(!cdmServer.isStarted(1)) {
+ logger.info("[CDM-Server] Server already stopped @ " + host + ":" + httpPort );
+ return;
+ }
+ }
+
+ if(serverAlreadyRunning) {
+ return;
+ }
+ Thread t = new Thread() {
+ @Override
+ public void run() {
+ StringBuffer output = new StringBuffer();
+ try{
+ Process p;
+ String command = "java -jar " + DEFAULT_JETTY_RESOURCE.getFile().getAbsolutePath()
+ + getStopServerArgs() + " --stop ";
+ logger.info("[CDM-Server] Stop Command : " + command);
+ p = Runtime.getRuntime().exec(command);
+
+ BufferedReader inpReader =
+ new BufferedReader(new InputStreamReader(p.getInputStream()));
+
+ BufferedReader errReader =
+ new BufferedReader(new InputStreamReader(p.getErrorStream()));
+
+ String line = "";
+ while ((line = inpReader.readLine())!= null) {
+ logger.info("[CDM-Server Stop] : " + line);
+ }
+
+ while ((line = errReader.readLine())!= null) {
+ logger.info("[CDM-Server Stop] : " + line);
+ }
+ logger.info("CDM-Server Stopped : ");
+ } catch (Exception e) {
+ logger.info("[CDM-Server] Could not stop @ " + host + ":" + httpPort + ". Please kill it manually");
+
+ }
+
+ }
+ };
+
+ t.setDaemon(true);
+ t.start();
+
+ }
+
+ public static void stopServerViaJMX(int jmxPort) throws CDMServerException {
+ String JMX_URL = "service:jmx:rmi:///jndi/rmi://localhost:" + jmxPort + "/jmxrmi";
+ logger.warn("Shutting down Jetty instance ... ");
+
+ try {
+ JMXConnector connector = JMXConnectorFactory.connect(new JMXServiceURL(JMX_URL), null);
+ connector.connect(null);
+ MBeanServerConnection connection = connector.getMBeanServerConnection();
+ ObjectName objectName = new ObjectName("org.eclipse.jetty.server:type=server,id=0");
+ connection.invoke(objectName, "stop", null, null);
+ logger.warn("Shutdown command sent");
+ } catch (InstanceNotFoundException e) {
+ throw new CDMServerException(e);
+ } catch (MBeanException e) {
+ throw new CDMServerException(e);
+ } catch (ReflectionException e) {
+ throw new CDMServerException(e);
+ } catch (IOException e) {
+ throw new CDMServerException(e);
+ } catch (MalformedObjectNameException e) {
+ throw new CDMServerException(e);
+ }
+ }
+
+ public void convertEditorToServerConfig() {
+ String xmlString = "<?xml version=\"1.0\" encoding=\"UTF-8\"?> " + System.lineSeparator() +
+ "<beans xmlns=\"http://www.springframework.org/schema/beans\"" + System.lineSeparator() +
+ "xmlns:xsi=\"http://www.w3.org/2001/XMLSchema-instance\"" + System.lineSeparator() +
+ "xmlns:tx=\"http://www.springframework.org/schema/tx\"" + System.lineSeparator() +
+ "xmlns:context=\"http://www.springframework.org/schema/context\"" + System.lineSeparator() +
+ "xsi:schemaLocation=\"http://www.springframework.org/schema/beans http://www.springframework.org/schema/beans/spring-beans-2.5.xsd" + System.lineSeparator() +
+ "http://www.springframework.org/schema/context http://www.springframework.org/schema/context/spring-context-2.5.xsd" + System.lineSeparator() +
+ "http://www.springframework.org/schema/tx http://www.springframework.org/schema/tx/spring-tx-2.5.xsd" + System.lineSeparator() +
+ ">" + System.lineSeparator() +
+ "<bean id=\"dataSourceProperties\" class=\"eu.etaxonomy.cdm.remote.config.DataSourceProperties\">" + System.lineSeparator() +
+ " <property name=\"propsMap\">" + System.lineSeparator() +
+ " <map/>" + System.lineSeparator() +
+ " </property>" + System.lineSeparator() +
+ "</bean>";
+
+ for(ICdmDataSource dataSource : CdmPersistentDataSource.getAllDataSources()) {
+
+ }
+ }
+}
--- /dev/null
+/**
+ * Copyright (C) 2014 EDIT
+ * European Distributed Institute of Taxonomy
+ * http://www.e-taxonomy.eu
+ *
+ * The contents of this file are subject to the Mozilla Public License Version 1.1
+ * See LICENSE.TXT at the top of this package for the full license terms.
+ */
+package eu.etaxonomy.taxeditor.httpinvoker;
+
+
+import java.util.Map;
+
+import org.apache.log4j.Logger;
+import org.junit.Assert;
+import org.junit.BeforeClass;
+import org.junit.Test;
+
+import eu.etaxonomy.cdm.config.CdmPersistentSourceUtils;
+import eu.etaxonomy.cdm.config.CdmSourceException;
+import eu.etaxonomy.cdm.model.metadata.CdmMetaData.MetaDataPropertyName;
+import eu.etaxonomy.cdm.model.name.NomenclaturalCode;
+import eu.etaxonomy.taxeditor.remoting.source.CdmPersistentRemoteSource;
+import eu.etaxonomy.taxeditor.remoting.source.CdmRemoteSource;
+import eu.etaxonomy.taxeditor.remoting.source.CdmRemoteSourceException;
+import eu.etaxonomy.taxeditor.remoting.source.ICdmRemoteSource;
+
+/**
+ * Class to test the cdm persistent source functionality, including
+ * initialising / saving / updating and deleting
+ *
+ * Corresponding test sources settings can be found at
+ * /src/text/resources/eu.etaxonomy.cdm/cdm.datasources.xml
+ *
+ */
+public class CdmPersistentRemoteSourceTest extends BaseRemotingTest {
+ private static final Logger logger = Logger.getLogger(CdmPersistentRemoteSourceTest.class);
+
+ private CdmPersistentRemoteSource remotePersistentSource;
+
+ @BeforeClass
+ public static void initialize() {
+ }
+
+ @Test
+ public void whenLoadingExistingCompleteRemoteSourceThenLoadIsSuccessful() {
+
+ remotePersistentSource = getCdmPersistentRemoteSource();
+
+ String expectedServer = "127.0.0.1";
+ String expectedPort = "9090";
+ String expectedContextPath = "";
+ logger.info("Default remote source server : " + remotePersistentSource.getServer());
+ Assert.assertTrue("Default server should be " + expectedServer,
+ expectedServer.equals(remotePersistentSource.getServer()));
+
+ logger.info("Default remote source port : " + remotePersistentSource.getPort());
+ Assert.assertTrue("Default port should be 9090",
+ expectedPort.equals(String.valueOf(remotePersistentSource.getPort())));
+
+ logger.info("Default remote source context path : " + remotePersistentSource.getContextPath());
+ Assert.assertTrue("Default remote source context path should be " + expectedContextPath,
+ expectedContextPath.equals(remotePersistentSource.getContextPath()));
+
+ logger.info("Default remote source nomenclatural code : " + remotePersistentSource.getNomenclaturalCode().toString());
+ Assert.assertTrue("Default NomenclaturalCode should be ICNAFP",
+ NomenclaturalCode.ICNAFP.equals(remotePersistentSource.getNomenclaturalCode()));
+ }
+
+
+
+
+ @Test
+ public void whenConnectingToAnActiveServerThenConnectSuccessfully() {
+ // check if active server throws the right exception
+
+ remotePersistentSource = getCdmPersistentRemoteSource();
+
+ String dbSchemaVersion = "";
+ try {
+ dbSchemaVersion = remotePersistentSource.getDbSchemaVersion();
+ } catch (CdmSourceException e) {
+ Assert.fail("getDbSchemaVersion() on active cdm server should not have thrown CdmSourceException");
+ }
+ logger.info("dbSchemaVersion is " + dbSchemaVersion);
+
+
+ boolean isDbEmpty = false;
+ try {
+ isDbEmpty = remotePersistentSource.isDbEmpty();
+ } catch (CdmSourceException e) {
+ Assert.fail("isDbEmpty() on active cdm server should not have thrown CdmSourceException");
+ }
+ Assert.assertFalse(isDbEmpty);
+
+
+ boolean check = false;
+ try {
+ check = remotePersistentSource.checkConnection();
+ } catch (CdmSourceException e) {
+ Assert.fail("checkConnection() on active cdm server should not have thrown CdmSourceException");
+ }
+ Assert.assertTrue(check);
+
+
+ }
+
+ @Test
+ public void whenRequestingMetadatFromRemoteSourceThenMetaDataIsRetrieved() {
+ try {
+ remotePersistentSource = getCdmPersistentRemoteSource();
+ Map<MetaDataPropertyName, String> cdmMetaDataMap = remotePersistentSource.getMetaDataMap();
+ for(MetaDataPropertyName mdpn : cdmMetaDataMap.keySet()) {
+ String value = cdmMetaDataMap.get(mdpn);
+ logger.info("MetaData Property " + mdpn.name() + " has value " + value);
+ Assert.assertNotNull("Meta Data Value for property for " + mdpn.name() + " should not be null", value);
+ }
+ } catch (CdmSourceException e) {
+ // TODO Auto-generated catch block
+ e.printStackTrace();
+ }
+ }
+
+ @Test
+ public void whenLoadingNonExistingRemoteSourceThenThrowException() {
+ try {
+ remotePersistentSource = CdmPersistentRemoteSource.NewInstance("nonExistingSource");
+ Assert.fail("Initialising a non-existing remote source should throw an exception");
+ } catch (CdmRemoteSourceException e) {
+ logger.info(e.getMessage());
+ }
+ }
+
+ @Test
+ public void whenLoadingExistingIncompleteRemoteSourceThenThrowException() {
+ try {
+ remotePersistentSource = CdmPersistentRemoteSource.NewInstance("incomplete");
+ Assert.fail("Initialising an incomplete remote source should throw an exception");
+ } catch (CdmRemoteSourceException e) {
+ //Assert.assertThat(e.getMessage(), containsString("Required property '" + CdmSourceProperties.SERVER.toString() + "' is missing"));
+ }
+ }
+
+ @Test
+ public void whenSavingUpdatingDeletingNewCompleteRemoteSourceThenSaveUpdateDeleteIsSuccessful() {
+ String strRemoteSource = "local";
+ Assert.assertFalse("New remote source '" + strRemoteSource + "' should not yet exist in source settings file",
+ CdmPersistentRemoteSource.exists(strRemoteSource));
+ try {
+ ICdmRemoteSource remoteSource =
+ CdmRemoteSource.NewInstance(strRemoteSource,
+ "127.0.0.1",
+ 8080,
+ "col",
+ NomenclaturalCode.ICNAFP);
+ remotePersistentSource = CdmPersistentRemoteSource.save(strRemoteSource,remoteSource);
+
+ logger.info("Server : " + remotePersistentSource.getServer());
+ Assert.assertTrue("Server value should be equal",
+ remoteSource.getServer().equals(remotePersistentSource.getServer()));
+
+ logger.info("Port : " + remotePersistentSource.getPort());
+ Assert.assertTrue("Port value should be equal",
+ remoteSource.getPort() == remotePersistentSource.getPort());
+
+ logger.info("Context Path : " + remotePersistentSource.getContextPath());
+ Assert.assertTrue("Context Path value should be equal",
+ remoteSource.getContextPath().equals(remotePersistentSource.getContextPath()));
+
+ logger.info("Nomenclatural Code : " + remotePersistentSource.getNomenclaturalCode().name());
+ Assert.assertTrue("Nomenclatural Code value should be equal",
+ remoteSource.getNomenclaturalCode().name().equals(remotePersistentSource.getNomenclaturalCode().name()));
+
+ Assert.assertTrue("New remote source '" + strRemoteSource + "' should be saved in source settings file",
+ CdmPersistentRemoteSource.exists(strRemoteSource));
+
+ remoteSource = CdmRemoteSource.NewInstance(strRemoteSource,
+ "127.0.0.55",
+ 9090,
+ "cyprus",
+ NomenclaturalCode.ICNB);
+ remotePersistentSource = CdmPersistentRemoteSource.update(strRemoteSource,remoteSource);
+
+ logger.info("Server : " + remotePersistentSource.getServer());
+ Assert.assertTrue("Server value should be equal",
+ remoteSource.getServer().equals(remotePersistentSource.getServer()));
+
+ logger.info("Port : " + remotePersistentSource.getPort());
+ Assert.assertTrue("Port value should be equal",
+ remoteSource.getPort() == remotePersistentSource.getPort());
+
+ logger.info("Context Path : " + remotePersistentSource.getContextPath());
+ Assert.assertTrue("Context Path value should be equal",
+ remoteSource.getContextPath().equals(remotePersistentSource.getContextPath()));
+
+ logger.info("Nomenclatural Code : " + remotePersistentSource.getNomenclaturalCode().name());
+ Assert.assertTrue("Nomenclatural Code value should be equal",
+ remoteSource.getNomenclaturalCode().name().equals(remotePersistentSource.getNomenclaturalCode().name()));
+
+ Assert.assertTrue("New remote source '" + strRemoteSource + "' should be saved in source settings file",
+ CdmPersistentRemoteSource.exists(strRemoteSource));
+
+ CdmPersistentSourceUtils.delete(remotePersistentSource);
+
+ Assert.assertFalse("New remote source '" + strRemoteSource + "' should no longer exist in source settings file",
+ CdmPersistentRemoteSource.exists(strRemoteSource));
+
+ } catch (CdmRemoteSourceException e) {
+ Assert.fail("Saving a new complete remote source should not throw an exception");
+ logger.info(e.getMessage());
+ }
+ }
+
+
+
+}
--- /dev/null
+/**
+* Copyright (C) 2014 EDIT
+* European Distributed Institute of Taxonomy
+* http://www.e-taxonomy.eu
+*
+* The contents of this file are subject to the Mozilla Public License Version 1.1
+* See LICENSE.TXT at the top of this package for the full license terms.
+*/
+package eu.etaxonomy.taxeditor.httpinvoker;
+
+import org.apache.log4j.Logger;
+import org.junit.Assert;
+import org.junit.Test;
+import org.springframework.remoting.RemoteAccessException;
+
+import eu.etaxonomy.cdm.config.CdmSourceException;
+import eu.etaxonomy.cdm.model.name.NomenclaturalCode;
+import eu.etaxonomy.taxeditor.lazyloading.RemotePersistentCollectionTest;
+import eu.etaxonomy.taxeditor.remoting.source.CdmRemoteSource;
+
+public class CdmRemoteSourceTest extends BaseRemotingTest {
+ private static final Logger logger = Logger.getLogger(RemotePersistentCollectionTest.class);
+
+
+ @Test
+ public void whenConnectingToInactiveServerThenFailToConnect() {
+
+ // check if non-active server throws the right exception
+ CdmRemoteSource inactiveCrs = CdmRemoteSource.NewInstance(cdmServer.getName(),
+ cdmServer.getHost(),
+ 808080,
+ cdmServer.getContextPath(),
+ NomenclaturalCode.ICNAFP);
+ try {
+ inactiveCrs.getDbSchemaVersion();
+ Assert.fail("getDbSchemaVersion() on inactive cdm server should have thrown RemoteAccessException");
+ } catch(CdmSourceException cse) {
+ Assert.fail("getDbSchemaVersion() on inactive cdm server should have thrown RemoteAccessException and not CdmSourceException");
+ } catch(RemoteAccessException rae){
+
+ }
+
+ try {
+ inactiveCrs.isDbEmpty();
+ Assert.fail("isDbEmpty() on inactive cdm server should have thrown RemoteAccessException");
+ } catch(CdmSourceException cse) {
+ Assert.fail("isDbEmpty() on inactive cdm server should have thrown RemoteAccessException and not CdmSourceException");
+ } catch(RemoteAccessException rae){
+
+ }
+
+ try {
+ inactiveCrs.checkConnection();
+ Assert.fail("checkConnection() on inactive cdm server should have thrown RemoteAccessException");
+ } catch(CdmSourceException cse) {
+ Assert.fail("checkConnection() on inactive cdm server should have thrown RemoteAccessException and not CdmSourceException");
+ } catch(RemoteAccessException rae){
+
+ }
+
+ }
+
+ @Test
+ public void whenConnectingToAnActiveServerWithServicesBlockedThenFailToAccessServices() {
+
+ }
+
+ @Test
+ public void whenConnectingToAnActiveServerThenConnectSuccessfully() {
+ // check if active server throws the right exception
+ CdmRemoteSource activeCrs = CdmRemoteSource.NewInstance(cdmServer.getName(),
+ cdmServer.getHost(),
+ cdmServer.getPort(),
+ cdmServer.getContextPath(),
+ NomenclaturalCode.ICNAFP);
+ String dbSchemaVersion = "";
+ try {
+ dbSchemaVersion = activeCrs.getDbSchemaVersion();
+ } catch (CdmSourceException e) {
+ Assert.fail("getDbSchemaVersion() on active cdm server should not have thrown CdmSourceException");
+ }
+ logger.info("dbSchemaVersion is " + dbSchemaVersion);
+
+
+ boolean isDbEmpty = false;
+ try {
+ isDbEmpty = activeCrs.isDbEmpty();
+ } catch (CdmSourceException e) {
+ Assert.fail("isDbEmpty() on active cdm server should not have thrown CdmSourceException");
+ }
+ Assert.assertFalse(isDbEmpty);
+
+
+ boolean check = true;
+ try {
+ isDbEmpty = activeCrs.checkConnection();
+ } catch (CdmSourceException e) {
+ Assert.fail("checkConnection() on active cdm server should not have thrown CdmSourceException");
+ }
+ Assert.assertTrue(check);
+
+ }
+
+}
--- /dev/null
+// $Id$
+/**
+* Copyright (C) 2014 EDIT
+* European Distributed Institute of Taxonomy
+* http://www.e-taxonomy.eu
+*
+* The contents of this file are subject to the Mozilla Public License Version 1.1
+* See LICENSE.TXT at the top of this package for the full license terms.
+*/
+package eu.etaxonomy.taxeditor.httpinvoker;
+
+import java.net.URL;
+
+import org.apache.log4j.Logger;
+import org.eclipse.core.runtime.Platform;
+import org.junit.Assert;
+import org.junit.Ignore;
+import org.junit.Test;
+import org.osgi.framework.Bundle;
+import org.unitils.UnitilsJUnit4;
+
+import eu.etaxonomy.taxeditor.remoting.server.CDMServerException;
+
+/**
+ * @author cmathew
+ * @date 6 Oct 2014
+ *
+ */
+public class CdmServerTest extends UnitilsJUnit4 {
+ private static final Logger logger = Logger.getLogger(CdmServerTest.class);
+
+ @Ignore // this should be targetting integration or production
+ @Test
+ public void startCdmServer() throws CDMServerException {
+ Bundle bundle = Platform.getBundle("eu.etaxonomy.taxeditor.test");
+ URL serverPropertiesURL = bundle.getEntry("src/test/resources/server.properties");
+ CDMServer cdmServer = new CDMServer("cdmTest", serverPropertiesURL);
+ cdmServer .start();
+ try {
+ cdmServer.stop(true);
+ } catch (Exception e) {
+ e.printStackTrace();
+ Assert.fail("Server could not be stopped. Reason : " + e.getMessage());
+ }
+ }
+
+}
--- /dev/null
+/**
+ * Copyright (C) 2014 EDIT
+ * European Distributed Institute of Taxonomy
+ * http://www.e-taxonomy.eu
+ *
+ * The contents of this file are subject to the Mozilla Public License Version 1.1
+ * See LICENSE.TXT at the top of this package for the full license terms.
+ */
+package eu.etaxonomy.taxeditor.httpinvoker;
+
+import org.apache.log4j.Logger;
+import org.junit.Assert;
+import org.junit.Ignore;
+import org.junit.Test;
+import org.springframework.remoting.RemoteAccessException;
+import org.springframework.security.core.context.SecurityContext;
+import org.springframework.security.core.context.SecurityContextHolder;
+
+import eu.etaxonomy.cdm.api.application.CdmApplicationState;
+import eu.etaxonomy.cdm.api.service.ITestService;
+import eu.etaxonomy.cdm.config.CdmSourceException;
+import eu.etaxonomy.cdm.model.description.PolytomousKey;
+
+/**
+ * Class to test the HttpInvoker services exposed by the CDM Sever
+ *
+ */
+public class HttpInvokerServicesTest extends BaseRemotingTest {
+ private static final Logger logger = Logger.getLogger(HttpInvokerServicesTest.class);
+
+ ITestService testService = getRemoteApplicationController().getTestService();
+
+ @Test
+ public void whenCallingMethodsOnRemoteServicesThenSucceed() {
+ try {
+
+ //getRemoteApplicationController().getDatabaseService();
+ String dbSchemaVersion = getRemoteApplicationController().getDatabaseService().getDbSchemaVersion();
+ logger.info("dbSchemaVersion is " + dbSchemaVersion);
+
+
+ } catch (CdmSourceException e) {
+ Assert.fail("pinging database service on active cdm server should not have thrown CdmSourceException");
+ }
+
+ getRemoteApplicationController().getPolytomousKeyService().list(PolytomousKey.class, null, null, null, null);
+
+ }
+
+ @Ignore
+ @Test
+ public void whenCallingMethodsOnRemoteServicesThenFailIfNotAuthenticated() {
+
+ SecurityContext context = SecurityContextHolder.getContext();
+
+ CdmApplicationState.setCurrentSecurityContext(null);
+ try {
+ getRemoteApplicationController().getPolytomousKeyService().list(PolytomousKey.class, null, null, null, null);
+ Assert.fail("service call should fail as it is not authenticated");
+ }catch (RemoteAccessException rae) {
+
+ }
+
+ CdmApplicationState.setCurrentSecurityContext(context);
+
+ }
+
+ // should be kept at ignore and only used for manual testing
+ // otherwise tests will take too much time
+ @Ignore
+ @Test
+ public void testDisableReadTimeout() throws InterruptedException {
+ testService.waitFor((long) 120000.0);
+ }
+
+}
--- /dev/null
+// $Id$
+/**
+* Copyright (C) 2015 EDIT
+* European Distributed Institute of Taxonomy
+* http://www.e-taxonomy.eu
+*
+* The contents of this file are subject to the Mozilla Public License Version 1.1
+* See LICENSE.TXT at the top of this package for the full license terms.
+*/
+package eu.etaxonomy.taxeditor.httpinvoker;
+
+import org.apache.log4j.Logger;
+import org.junit.After;
+import org.junit.Before;
+
+import eu.etaxonomy.cdm.api.application.CdmApplicationState;
+import eu.etaxonomy.taxeditor.remoting.cache.CdmTransientEntityCacher;
+import eu.etaxonomy.taxeditor.session.ICdmEntitySession;
+import eu.etaxonomy.taxeditor.session.MockSessionOwner;
+
+/**
+ * @author cmathew
+ * @date 12 Jun 2015
+ *
+ */
+public abstract class RemotingSessionAwareTest extends BaseRemotingTest {
+
+ private static final Logger logger = Logger.getLogger(RemotingSessionAwareTest.class);
+
+ protected CdmTransientEntityCacher cacher;
+ protected MockSessionOwner sessionOwner;
+
+
+ @Before
+ public void initializeSession() {
+
+ sessionOwner = new MockSessionOwner();
+ logger.info("created mock session owner : " + sessionOwner);
+ ICdmEntitySession cdmEntitySession = cdmEntitySessionManager.newSession(sessionOwner, true);
+ CdmApplicationState.getCurrentDataChangeService().register(sessionOwner);
+ sessionOwner.setCdmEntitySession(cdmEntitySession);
+ cacher = getCacher(sessionOwner);
+ }
+
+ @After
+ public void postSessionAwareTest() {
+ sessionOwner.dispose();
+ CdmApplicationState.getCurrentDataChangeService().unregister(sessionOwner);
+ logger.info("disposed of mock session owner : " + sessionOwner);
+ }
+}
--- /dev/null
+/**
+ * Copyright (C) 2014 EDIT
+ * European Distributed Institute of Taxonomy
+ * http://www.e-taxonomy.eu
+ *
+ * The contents of this file are subject to the Mozilla Public License Version 1.1
+ * See LICENSE.TXT at the top of this package for the full license terms.
+ */
+package eu.etaxonomy.taxeditor.lazyloading;
+
+import java.util.HashSet;
+import java.util.Iterator;
+import java.util.List;
+import java.util.Set;
+import java.util.UUID;
+
+import org.apache.log4j.Logger;
+import org.junit.Assert;
+import org.junit.BeforeClass;
+import org.junit.Ignore;
+import org.junit.Test;
+import org.unitils.dbunit.annotation.DataSet;
+
+import eu.etaxonomy.cdm.api.application.CdmApplicationRemoteController;
+import eu.etaxonomy.cdm.api.service.IClassificationService;
+import eu.etaxonomy.cdm.api.service.ITaxonService;
+import eu.etaxonomy.cdm.model.agent.Person;
+import eu.etaxonomy.cdm.model.agent.Team;
+import eu.etaxonomy.cdm.model.common.CdmBase;
+import eu.etaxonomy.cdm.model.name.BotanicalName;
+import eu.etaxonomy.cdm.model.name.NonViralName;
+import eu.etaxonomy.cdm.model.name.TaxonNameBase;
+import eu.etaxonomy.cdm.model.taxon.Classification;
+import eu.etaxonomy.cdm.model.taxon.SynonymRelationship;
+import eu.etaxonomy.cdm.model.taxon.Taxon;
+import eu.etaxonomy.cdm.model.taxon.TaxonNode;
+import eu.etaxonomy.taxeditor.httpinvoker.BaseRemotingTest;
+
+
+
+
+/**
+ * Class to test the {@link CdmApplicationRemoteController}
+ *
+ */
+// FIXME:Remoting need to create a proper dataset for this test
+// Could be combined with RemotePersistentCollectionTest
+@Ignore
+@DataSet
+public class AbstractLazyInitializerTest extends BaseRemotingTest {
+ private static final Logger logger = Logger.getLogger(AbstractLazyInitializerTest.class);
+
+ private static IClassificationService classificationService;
+ private static ITaxonService taxonService;
+
+ private static List<TaxonNode> taxonNodes;
+
+ private final UUID taxonUuid1 = UUID.fromString("8217ef77-2ab1-4318-bd67-ccd0cdef07c4");
+ private final UUID taxonUuid2 = UUID.fromString("ef96fafa-7750-4141-b31b-1ad1daab3e76");
+
+
+ @BeforeClass
+ public static void initializeRemoteLazyLoading() {
+
+ taxonService = getRemoteApplicationController().getTaxonService();
+ classificationService= getRemoteApplicationController().getClassificationService();
+ List<Classification> classifications = classificationService.listClassifications(1,0,null,null);
+ Assert.assertFalse(classifications.isEmpty());
+
+ Classification classification = classifications.get(0);
+ Assert.assertNotNull(classification);
+ taxonNodes = classificationService.getAllNodes();
+ Assert.assertFalse(taxonNodes.isEmpty());
+
+ }
+
+
+
+ @Test
+ public void testCDMEntityGet() {
+ //ITaxonService taxonService = getRemoteApplicationController().getTaxonService();
+ Iterator<TaxonNode> taxonNodeItr = taxonNodes.iterator();
+ int maxcount = 30;
+ int count = 0;
+ while(taxonNodeItr.hasNext() && count <= maxcount) {
+ TaxonNode taxonNode = taxonNodeItr.next();
+ Assert.assertNotNull(taxonNode);
+
+ Taxon taxon = taxonNode.getTaxon();
+ Assert.assertNotNull(taxon);
+
+ String taxonTitle = taxon.getTitleCache();
+ logger.info("Taxon : " + taxonTitle);
+
+ TaxonNameBase name = taxon.getName();
+ Assert.assertNotNull(name);
+
+ String nameTitle = name.getTitleCache();
+ logger.info("Taxon Name : " + nameTitle);
+
+ count++;
+ }
+ }
+
+ @Test
+ public void taxonReadTest() {
+ Taxon taxon = (Taxon)taxonService.find(taxonUuid1);
+
+ }
+
+
+ @Test
+ public void testCDMEntitySave() {
+ Taxon taxon = (Taxon)taxonService.find(taxonUuid1);
+ String oldTitleCache = taxon.getTitleCache();
+
+ System.out.println("Taxon title : " + oldTitleCache);
+
+ taxon.setTitleCache(oldTitleCache + ":updated", true);
+ taxonService.merge(taxon);
+
+ Taxon taxonNew = (Taxon)taxonService.find(taxonUuid1);
+ System.out.println("New Taxon Title : " + taxonNew.getTitleCache());
+
+ Assert.assertTrue("Title caches should not be equal",oldTitleCache.equals(taxonNew.getTitleCache()));
+
+
+ taxonNew.setTitleCache(oldTitleCache, true);
+ taxonService.merge(taxonNew);
+
+ Taxon taxonOld = (Taxon)taxonService.find(taxonUuid1);
+ System.out.println("Old Taxon Title : " + taxonOld.getTitleCache());
+
+ Assert.assertEquals("Title caches should be equal",oldTitleCache,taxonOld.getTitleCache());
+
+ }
+
+
+ @Test
+ public void testCDMEntitySaveLazyNew() {
+ Team combAuthor = Team.NewInstance();
+ combAuthor.addTeamMember(Person.NewTitledInstance("test member"));
+ BotanicalName name = BotanicalName.NewInstance(null, "Test1", null, null, null, null, null, null, null);
+ name.setCombinationAuthorship(combAuthor);
+ Taxon tax1 = Taxon.NewInstance(name, null);
+ UUID taxonUuid1 = taxonService.save(tax1).getUuid();
+
+ Taxon taxon = (Taxon)taxonService.find(taxonUuid1);
+
+ NonViralName nvn = CdmBase.deproxy(taxon.getName(),NonViralName.class);
+ String oldTitleCache = nvn.getTitleCache();
+ logger.info("Taxon Name Title : " + oldTitleCache);
+ nvn.setTitleCache(oldTitleCache + ":updated",false);
+ taxonService.update(taxon);
+
+ Taxon taxonNew = (Taxon)taxonService.find(taxonUuid1);
+ NonViralName nvnNew = CdmBase.deproxy(taxon.getName(),NonViralName.class);
+ logger.info("New Taxon Name Title : " + nvnNew.getTitleCache());
+
+ Assert.assertTrue("Title caches should not be equal",oldTitleCache.equals(nvnNew.getTitleCache()));
+
+ nvnNew.setTitleCache(oldTitleCache, true);
+ taxonService.update(taxon);
+
+ Taxon taxonOld = (Taxon)taxonService.find(taxonUuid1);
+ NonViralName nvnOld = CdmBase.deproxy(taxon.getName(),NonViralName.class);
+ logger.info("Old Taxon Name Title : " + nvnNew.getTitleCache());
+
+ Assert.assertEquals("Title caches should be equal",oldTitleCache,nvnOld.getTitleCache());
+ }
+
+ @Ignore
+ @Test
+ public void testCDMEntitySaveCollection() {
+ Taxon taxon = (Taxon)taxonService.find(taxonUuid1);
+
+ Set<SynonymRelationship> synRelations = taxon.getSynonymRelations();
+ Set<String> relToTitles = new HashSet<String>();
+ Iterator<SynonymRelationship> srItr = synRelations.iterator();
+ while(srItr.hasNext()) {
+ SynonymRelationship sr = srItr.next();
+ System.out.println("Synonym Title Cache : " + sr.getSynonym().getTitleCache());
+ relToTitles.add(sr.getSynonym().getTitleCache());
+ sr.getSynonym().setTitleCache(sr.getSynonym().getTitleCache() + ":updated");
+
+ }
+ taxonService.merge(taxon);
+
+ Taxon taxonNew = (Taxon)taxonService.find(taxonUuid1);
+ Set<SynonymRelationship> synRelationsNew = taxonNew.getSynonymRelations();
+
+ Iterator<SynonymRelationship> srItrNew = synRelationsNew.iterator();
+ Iterator<String> relToTitlesItr = relToTitles.iterator();
+ while(srItrNew.hasNext() && relToTitlesItr.hasNext()) {
+ SynonymRelationship srNew = srItrNew.next();
+ String relToTitle = relToTitlesItr.next();
+ System.out.println("New Synonym Title Cache: " + srNew.getSynonym().getTitleCache());
+ Assert.assertTrue("Synonym Title caches should not be equal", srNew.getSynonym().getTitleCache().equals(relToTitle));
+ srNew.getSynonym().setTitleCache(relToTitle);
+ }
+
+ Taxon taxonOld = (Taxon)taxonService.find(taxonUuid1);
+
+ Set<SynonymRelationship> synRelationsOld = taxonNew.getSynonymRelations();
+ Iterator<SynonymRelationship> srItrOld = synRelationsOld.iterator();
+ relToTitlesItr = relToTitles.iterator();
+ while(srItrOld.hasNext() && relToTitlesItr.hasNext()) {
+ SynonymRelationship srOld = srItrOld.next();
+ String relToTitle = relToTitlesItr.next();
+ System.out.println("New Synonym Title Cache: " + srOld.getSynonym().getTitleCache());
+ Assert.assertEquals("Synonym Title caches should be equal", srOld.getSynonym().getTitleCache(), relToTitle);
+
+ }
+ }
+}
--- /dev/null
+package eu.etaxonomy.taxeditor.lazyloading;
+
+import org.apache.log4j.Logger;
+import org.junit.Assert;
+import org.junit.Test;
+
+import eu.etaxonomy.cdm.api.application.CdmApplicationState;
+import eu.etaxonomy.cdm.api.cache.CdmServiceCacher;
+import eu.etaxonomy.cdm.model.common.Language;
+import eu.etaxonomy.taxeditor.httpinvoker.RemotingSessionAwareTest;
+
+
+public class CdmServiceCacherTest extends RemotingSessionAwareTest {
+ private static final Logger logger = Logger.getLogger(CdmServiceCacherTest.class);
+
+
+ private static CdmServiceCacher cdmServiceCacher = CdmApplicationState.getCdmServiceCacher();
+
+ @Test
+ public void testLanguageCache() {
+ Language defaultLanguage = Language.getDefaultLanguage();
+
+ Language defaultLanguageInCache = (Language)cdmServiceCacher.getFromCache(defaultLanguage.getUuid());
+ Assert.assertEquals("Loaded Language Term should match Language Term in Cache",defaultLanguage,defaultLanguageInCache);
+
+ Language language = Language.getLanguageFromUuid(Language.uuidFrench);
+ Language languageInCache = (Language)cdmServiceCacher.getFromCache(language.getUuid());
+ Assert.assertEquals("Loaded Language Term should match Language Term in Cache",language,languageInCache);
+
+ }
+
+}
--- /dev/null
+// $Id$
+/**
+* Copyright (C) 2015 EDIT
+* European Distributed Institute of Taxonomy
+* http://www.e-taxonomy.eu
+*
+* The contents of this file are subject to the Mozilla Public License Version 1.1
+* See LICENSE.TXT at the top of this package for the full license terms.
+*/
+package eu.etaxonomy.taxeditor.lazyloading;
+
+import java.util.Arrays;
+import java.util.List;
+import java.util.Set;
+import java.util.UUID;
+
+import org.junit.Ignore;
+import org.junit.Test;
+
+import eu.etaxonomy.cdm.api.service.ITaxonService;
+import eu.etaxonomy.cdm.model.common.CdmBase;
+import eu.etaxonomy.cdm.model.name.TaxonNameBase;
+import eu.etaxonomy.cdm.model.taxon.Synonym;
+import eu.etaxonomy.cdm.model.taxon.SynonymRelationship;
+import eu.etaxonomy.cdm.model.taxon.Taxon;
+import eu.etaxonomy.cdm.model.taxon.TaxonBase;
+import eu.etaxonomy.taxeditor.httpinvoker.BaseRemotingTest;
+import eu.etaxonomy.taxeditor.store.CdmStore;
+
+/**
+ * This test class is primarily for performance testing.
+ * It should be used to make read-only calls to the target cdm-server.
+ *
+ * @author cmathew
+ * @date 26 Aug 2015
+ *
+ */
+//FIXME:Remoting ignoring until we can target integration servers
+@Ignore
+public class PropertyPathsTest extends BaseRemotingTest {
+
+ @Test
+ public void taxonLoadTest() {
+ // load taxon Crepis from cichorieae
+ UUID taxonBaseUuid = UUID.fromString("d0ae2121-1c32-4737-8c49-f871d429fd90");
+ List<String> taxonBasePropertyPaths = Arrays.asList(new String[] {
+ "synonymRelations.synonym.name.status.type",
+ "name.homotypicalGroup.typifiedNames.taxonBases.synonymRelations.relatedFrom.name.status"
+ });
+ TaxonBase taxonBase = CdmStore.getService(ITaxonService.class).load(taxonBaseUuid, taxonBasePropertyPaths);
+ Taxon taxon = CdmBase.deproxy(taxonBase, Taxon.class);
+ Set<SynonymRelationship> synonymRelations = taxon.getSynonymRelations();
+ for(SynonymRelationship rel : synonymRelations) {
+ rel.getSynonym().getName().getStatus().size();
+ }
+ Set<TaxonNameBase> typifiedNames = taxon.getName().getHomotypicalGroup().getTypifiedNames();
+ for(TaxonNameBase name : typifiedNames) {
+ Set<TaxonBase> taxonBases = name.getTaxonBases();
+ for(TaxonBase tb : taxonBases) {
+ if(tb instanceof Synonym) {
+ Synonym syn = CdmBase.deproxy(tb, Synonym.class);
+ Set<SynonymRelationship> rels = syn.getSynonymRelations();
+ for(SynonymRelationship rel : rels) {
+ rel.getSynonym().getName().getStatus().size();
+ }
+ }
+ if(tb instanceof Taxon) {
+ Taxon syn = CdmBase.deproxy(tb, Taxon.class);
+ Set<SynonymRelationship> rels = syn.getSynonymRelations();
+ for(SynonymRelationship rel : rels) {
+ rel.getSynonym().getName().getStatus().size();
+ }
+ }
+ }
+ }
+ }
+
+}
--- /dev/null
+/**
+ * Copyright (C) 2014 EDIT
+ * European Distributed Institute of Taxonomy
+ * http://www.e-taxonomy.eu
+ *
+ * The contents of this file are subject to the Mozilla Public License Version 1.1
+ * See LICENSE.TXT at the top of this package for the full license terms.
+ */
+
+package eu.etaxonomy.taxeditor.lazyloading;
+
+import java.util.Arrays;
+import java.util.HashSet;
+import java.util.Iterator;
+import java.util.List;
+import java.util.Set;
+import java.util.UUID;
+
+import org.apache.log4j.Logger;
+import org.junit.Assert;
+import org.junit.BeforeClass;
+import org.junit.Ignore;
+import org.junit.Test;
+
+import eu.etaxonomy.cdm.api.service.IClassificationService;
+import eu.etaxonomy.cdm.api.service.ITaxonService;
+import eu.etaxonomy.cdm.model.agent.Person;
+import eu.etaxonomy.cdm.model.agent.Team;
+import eu.etaxonomy.cdm.model.common.CdmBase;
+import eu.etaxonomy.cdm.model.name.BotanicalName;
+import eu.etaxonomy.cdm.model.name.NonViralName;
+import eu.etaxonomy.cdm.model.name.TaxonNameBase;
+import eu.etaxonomy.cdm.model.taxon.SynonymRelationship;
+import eu.etaxonomy.cdm.model.taxon.Taxon;
+import eu.etaxonomy.cdm.model.taxon.TaxonNode;
+import eu.etaxonomy.taxeditor.httpinvoker.BaseRemotingTest;
+
+
+
+/**
+ * Test class which tests remoting for persistent cdm entities.
+ *
+ * FIXME:Remoting saving tests are ignored until the merge development is underway
+ * @author c.mathew
+ *
+ */
+//FIXME:Remoting need to create a proper dataset for this test
+//Could be combined with AbstractLazyInitializerTest
+@Ignore
+public class RemoteLazyLoadingTest extends BaseRemotingTest {
+
+ private static final Logger logger = Logger.getLogger(RemoteLazyLoadingTest.class);
+
+ private static IClassificationService classificationService;
+ private static ITaxonService taxonService;
+
+ private static List<TaxonNode> taxonNodes;
+
+ private final UUID taxonUuid1 = UUID.fromString("8217ef77-2ab1-4318-bd67-ccd0cdef07c4");
+ private final UUID taxonUuid2 = UUID.fromString("ef96fafa-7750-4141-b31b-1ad1daab3e76");
+
+
+ @BeforeClass
+ public static void initializeRemoteLazyLoading() {
+ taxonService = getRemoteApplicationController().getTaxonService();
+
+ classificationService= getRemoteApplicationController().getClassificationService();
+ //List<Classification> classifications = classificationService.listClassifications(1,0,null,null);
+// Assert.assertFalse(classifications.isEmpty());
+//
+// Classification classification = classifications.get(0);
+// Assert.assertNotNull(classification);
+ taxonNodes = classificationService.getAllNodes();
+ Assert.assertFalse(taxonNodes.isEmpty());
+
+ }
+
+
+
+ @Test
+ public void testCDMEntityGet() {
+ Iterator<TaxonNode> taxonNodeItr = taxonNodes.iterator();
+ int maxcount = 30;
+ int count = 0;
+ while(taxonNodeItr.hasNext() && count <= maxcount) {
+ TaxonNode taxonNode = taxonNodeItr.next();
+ Assert.assertNotNull(taxonNode);
+
+ Taxon taxon = taxonNode.getTaxon();
+ Assert.assertNotNull(taxon);
+
+ String taxonTitle = taxon.getTitleCache();
+ logger.info("Taxon : " + taxonTitle);
+
+ TaxonNameBase name = taxon.getName();
+ Assert.assertNotNull(name);
+
+ String nameTitle = name.getTitleCache();
+ logger.info("Taxon Name : " + nameTitle);
+
+ count++;
+ }
+
+
+ }
+
+ @Test
+ public void test() {
+
+ }
+
+ @Test
+ public void testCDMEntitySaveEager() {
+ Taxon taxon = (Taxon)taxonService.find(taxonUuid1);
+ String oldTitleCache = taxon.getTitleCache();
+
+ System.out.println("Taxon title : " + oldTitleCache);
+
+ taxon.setTitleCache(oldTitleCache + ":updated");
+ taxonService.merge(taxon);
+
+ Taxon taxonNew = (Taxon)taxonService.find(taxonUuid1);
+ System.out.println("New Taxon Title : " + taxonNew.getTitleCache());
+
+ Assert.assertTrue("Title caches should not be equal",oldTitleCache.equals(taxonNew.getTitleCache()));
+
+ taxonNew.setTitleCache(oldTitleCache);
+ taxonService.merge(taxonNew);
+
+ Taxon taxonOld = (Taxon)taxonService.find(taxonUuid1);
+ System.out.println("Old Taxon Title : " + taxonOld.getTitleCache());
+
+ Assert.assertEquals("Title caches should be equal",oldTitleCache,taxonOld.getTitleCache());
+
+ }
+
+
+ @Test
+ public void testCDMEntityUpdate() {
+
+ Team combAuthor = Team.NewInstance();
+ combAuthor.addTeamMember(Person.NewTitledInstance("test member"));
+ BotanicalName name = BotanicalName.NewInstance(null, "Test1", null, null, null, null, null, null, null);
+ name.setCombinationAuthorship(combAuthor);
+ Taxon taxon = Taxon.NewInstance(name, null);
+ UUID taxonUuid = taxonService.save(taxon).getUuid();
+
+ // Taxon taxon = (Taxon)taxonService.find(taxonUuid1);
+ // NonViralName nvn = CdmBase.deproxy(taxon.getName(),NonViralName.class);
+ // String oldTitleCache = nvn.getTitleCache();
+ // System.out.println("Taxon Name Title : " + oldTitleCache);
+ // nvn.setTitleCache(oldTitleCache + ":updated", true);
+ //
+ // taxon.setTitleCache(oldTitleCache + ":updated",true);
+ // try {
+ // taxonService.update(taxon);
+ // } catch (LazyInitializationException lie) {
+ // lie.printStackTrace();
+ // }
+
+ List<String> TAXON_INIT_STRATEGY = Arrays.asList(new String[] {
+ "name"
+ });
+ Taxon taxonNew = (Taxon)taxonService.findTaxonByUuid(taxonUuid,TAXON_INIT_STRATEGY);
+ NonViralName nvn = CdmBase.deproxy(taxonNew.getName(),NonViralName.class);
+ Team team = CdmBase.deproxy(nvn.getCombinationAuthorship(),Team.class);
+ String oldTitleCache = nvn.getTitleCache();
+ System.out.println("Taxon Name Title : " + oldTitleCache);
+ nvn.setTitleCache(oldTitleCache + ":updated", true);
+ taxonService.update(taxonNew);
+
+ }
+
+
+ @Test
+ public void testCDMEntitySaveLazy() {
+ Taxon taxon = (Taxon)taxonService.find(taxonUuid1);
+
+ NonViralName nvn = CdmBase.deproxy(taxon.getName(),NonViralName.class);
+ String oldTitleCache = nvn.getTitleCache();
+ System.out.println("Taxon Name Title : " + oldTitleCache);
+ nvn.setTitleCache(oldTitleCache + ":updated", true);
+ taxonService.update(taxon);
+
+ // Taxon taxonNew = (Taxon)taxonService.find(taxonUuid1);
+ // NonViralName nvnNew = CdmBase.deproxy(taxon.getName(),NonViralName.class);
+ // System.out.println("New Taxon Name Title : " + nvnNew.getTitleCache());
+ //
+ // Assert.assertNotEquals("Title caches should not be equal",oldTitleCache,nvnNew.getTitleCache());
+ //
+ // nvnNew.setTitleCache(oldTitleCache, true);
+ // taxonService.update(taxon);
+ //
+ // Taxon taxonOld = (Taxon)taxonService.find(taxonUuid1);
+ // NonViralName nvnOld = CdmBase.deproxy(taxon.getName(),NonViralName.class);
+ // System.out.println("Old Taxon Name Title : " + nvnNew.getTitleCache());
+ //
+ // Assert.assertEquals("Title caches should be equal",oldTitleCache,nvnOld.getTitleCache());
+ }
+
+ @Test
+ public void testCDMEntitySaveLazyNew() {
+ Team combAuthor = Team.NewInstance();
+ combAuthor.addTeamMember(Person.NewTitledInstance("test member"));
+ BotanicalName name = BotanicalName.NewInstance(null, "Test1", null, null, null, null, null, null, null);
+ name.setCombinationAuthorship(combAuthor);
+ Taxon tax1 = Taxon.NewInstance(name, null);
+ UUID taxonUuid1 = taxonService.save(tax1).getUuid();
+
+ Taxon taxon = (Taxon)taxonService.find(taxonUuid1);
+
+ NonViralName nvn = CdmBase.deproxy(taxon.getName(),NonViralName.class);
+ String oldTitleCache = nvn.getTitleCache();
+ logger.info("Taxon Name Title : " + oldTitleCache);
+ nvn.setTitleCache(oldTitleCache + ":updated",false);
+ taxonService.update(taxon);
+
+ Taxon taxonNew = (Taxon)taxonService.find(taxonUuid1);
+ NonViralName nvnNew = CdmBase.deproxy(taxon.getName(),NonViralName.class);
+ logger.info("New Taxon Name Title : " + nvnNew.getTitleCache());
+
+ Assert.assertTrue("Title caches should not be equal",oldTitleCache.equals(nvnNew.getTitleCache()));
+
+ nvnNew.setTitleCache(oldTitleCache, true);
+ taxonService.update(taxon);
+
+ Taxon taxonOld = (Taxon)taxonService.find(taxonUuid1);
+ NonViralName nvnOld = CdmBase.deproxy(taxon.getName(),NonViralName.class);
+ logger.info("Old Taxon Name Title : " + nvnNew.getTitleCache());
+
+ Assert.assertEquals("Title caches should be equal",oldTitleCache,nvnOld.getTitleCache());
+ }
+ @Ignore
+ @Test
+ public void testCDMEntitySaveCollection() {
+ Taxon taxon = (Taxon)taxonService.find(taxonUuid1);
+
+ Set<SynonymRelationship> synRelations = taxon.getSynonymRelations();
+ Set<String> relToTitles = new HashSet<String>();
+ Iterator<SynonymRelationship> srItr = synRelations.iterator();
+ while(srItr.hasNext()) {
+ SynonymRelationship sr = srItr.next();
+ System.out.println("Synonym Title Cache : " + sr.getSynonym().getTitleCache());
+ relToTitles.add(sr.getSynonym().getTitleCache());
+ sr.getSynonym().setTitleCache(sr.getSynonym().getTitleCache() + ":updated");
+
+ }
+ taxonService.merge(taxon);
+
+ Taxon taxonNew = (Taxon)taxonService.find(taxonUuid1);
+ Set<SynonymRelationship> synRelationsNew = taxonNew.getSynonymRelations();
+
+ Iterator<SynonymRelationship> srItrNew = synRelationsNew.iterator();
+ Iterator<String> relToTitlesItr = relToTitles.iterator();
+ while(srItrNew.hasNext() && relToTitlesItr.hasNext()) {
+ SynonymRelationship srNew = srItrNew.next();
+ String relToTitle = relToTitlesItr.next();
+ System.out.println("New Synonym Title Cache: " + srNew.getSynonym().getTitleCache());
+ Assert.assertTrue("Synonym Title caches should not be equal", srNew.getSynonym().getTitleCache().equals(relToTitle));
+ srNew.getSynonym().setTitleCache(relToTitle);
+ }
+
+ Taxon taxonOld = (Taxon)taxonService.find(taxonUuid1);
+
+ Set<SynonymRelationship> synRelationsOld = taxonNew.getSynonymRelations();
+ Iterator<SynonymRelationship> srItrOld = synRelationsOld.iterator();
+ relToTitlesItr = relToTitles.iterator();
+ while(srItrOld.hasNext() && relToTitlesItr.hasNext()) {
+ SynonymRelationship srOld = srItrOld.next();
+ String relToTitle = relToTitlesItr.next();
+ System.out.println("New Synonym Title Cache: " + srOld.getSynonym().getTitleCache());
+ Assert.assertEquals("Synonym Title caches should be equal", srOld.getSynonym().getTitleCache(), relToTitle);
+
+ }
+ }
+}
--- /dev/null
+/**
+* Copyright (C) 2014 EDIT
+* European Distributed Institute of Taxonomy
+* http://www.e-taxonomy.eu
+*
+* The contents of this file are subject to the Mozilla Public License Version 1.1
+* See LICENSE.TXT at the top of this package for the full license terms.
+*/
+package eu.etaxonomy.taxeditor.lazyloading;
+
+import java.util.Iterator;
+import java.util.List;
+import java.util.Map;
+import java.util.Set;
+
+import org.apache.log4j.Logger;
+import org.junit.Assert;
+import org.junit.BeforeClass;
+import org.junit.Ignore;
+import org.junit.Test;
+
+import eu.etaxonomy.cdm.api.service.IClassificationService;
+import eu.etaxonomy.cdm.api.service.ICommonService;
+import eu.etaxonomy.cdm.model.common.Language;
+import eu.etaxonomy.cdm.model.common.LanguageString;
+import eu.etaxonomy.cdm.model.description.DescriptionElementBase;
+import eu.etaxonomy.cdm.model.description.TaxonDescription;
+import eu.etaxonomy.cdm.model.description.TextData;
+import eu.etaxonomy.cdm.model.taxon.Taxon;
+import eu.etaxonomy.cdm.model.taxon.TaxonNode;
+import eu.etaxonomy.taxeditor.httpinvoker.BaseRemotingTest;
+
+/**
+ * Test class which tests remoting for persistent collections.
+ *
+ * @author c.mathew
+ * @created 13.03.2014
+ */
+//FIXME:Remoting need to create a proper dataset for this test
+//Could be combined with AbstractLazyInitializerTest
+@Ignore
+public class RemotePersistentCollectionTest extends BaseRemotingTest {
+ private static final Logger logger = Logger.getLogger(RemotePersistentCollectionTest.class);
+
+ private static IClassificationService classificationService;
+ private static ICommonService commonService;
+
+ @BeforeClass
+ public static void initializeServices() {
+ classificationService = getRemoteApplicationController().getClassificationService();
+ commonService = getRemoteApplicationController().getCommonService();
+ }
+
+ /**
+ * Test method which checks remoting for persistent lists.
+ *
+ */
+ @Test
+ public void persistentListTest() {
+
+ List<TaxonNode> taxonNodes = classificationService.getAllNodes();
+ int size = taxonNodes.size();
+ logger.debug("classificationService.getAllNodes() size : " + size);
+ TaxonNode taxonNode = null;
+ if(size > 0) {
+ Assert.assertFalse(taxonNodes.isEmpty());
+
+ taxonNode = taxonNodes.get(0);
+ Assert.assertNotNull(taxonNode);
+ Assert.assertTrue(taxonNodes.contains(taxonNode));
+
+ // get the list of child nodes, which will give a
+ // proxy list which is not yet initialised
+ List<TaxonNode> childNodes = taxonNode.getChildNodes();
+ // this size call will first initialise the list locally by internally
+ // calling the ICommonService.initializeCollection method and then
+ // call size on the initialised list
+ int childCount = childNodes.size();
+
+ // this size call will initialise the list remotely and only return the
+ // size of the list
+ int remoteChildCount = commonService.size(taxonNode.getUuid(), "childNodes");
+ Assert.assertEquals(childCount, remoteChildCount);
+
+ String firstNodeTaxonTitle = taxonNode.getTaxon().getTitleCache();
+ Assert.assertNotNull(firstNodeTaxonTitle);
+
+ if(childCount > 0) {
+ Assert.assertFalse(childNodes.isEmpty());
+ // this get call will use the already initialised list to get the
+ // 0th element
+ TaxonNode localTaxonNode = childNodes.get(0);
+
+ // this get call will initialise the list remotely and only return the
+ // 0th element from the list
+ TaxonNode remoteTaxonNode = (TaxonNode)commonService.get(taxonNode.getUuid(), "childNodes",0);
+
+ // the locally and remotely retrieved taxon node should exist in the
+ // (local and remote) child nodes list, should be not-null and should be equal to each other
+ Assert.assertTrue(taxonNode.getChildNodes().contains(localTaxonNode));
+ Assert.assertTrue(taxonNode.getChildNodes().contains(remoteTaxonNode));
+ Assert.assertTrue(commonService.contains(taxonNode.getUuid(), "childNodes", localTaxonNode));
+ Assert.assertTrue(commonService.contains(taxonNode.getUuid(), "childNodes", remoteTaxonNode));
+ Assert.assertNotNull(remoteTaxonNode);
+ Assert.assertNotNull(localTaxonNode);
+ Assert.assertEquals(remoteTaxonNode,localTaxonNode);
+ }
+ }
+ }
+
+// @Test
+// public void persistentSetTest() {
+// List<Classification> classifications = classificationService.listClassifications(1,0,null,null);
+// int size = classifications.size();
+// if(size > 0) {
+// Assert.assertFalse(classifications.isEmpty());
+//
+// Classification classification = classifications.get(0);
+// Assert.assertNotNull(classification);
+// Assert.assertTrue(classifications.contains(classification));
+//
+// TaxonNode rootTaxonNode = classification.getRootNode();
+// // get the list of child nodes, which will give a
+// // proxy list which is not yet initialised
+// List<TaxonNode> childNodes = rootTaxonNode.getChildNodes();
+//
+// // this size call will initialise the list locally by internally
+// // calling the ICommonService.initializeCollection method
+// int childCount = childNodes.size();
+//
+// if(childCount > 0) {
+// Assert.assertFalse(childNodes.isEmpty());
+//
+// // this get call will use the already initialised list to get the
+// // 0th element
+// Taxon localTaxon = childNodes.get(0).getTaxon();
+// Assert.assertNotNull(localTaxon);
+//
+// TaxonNameBase taxonName = localTaxon.getName();
+// Assert.assertNotNull(taxonName);
+//
+// // get the list of taxa, which will give a
+// // proxy set which is not yet initialised
+// Set<Taxon> taxa = taxonName.getTaxonBases();
+//
+// // this size call will initialise the list locally by internally
+// // calling the ICommonService.initializeCollection method
+// int taxaCount = taxa.size();
+// Assert.assertNotEquals(taxaCount,-1);
+//
+// if(taxaCount > 0) {
+// Assert.assertFalse(taxa.isEmpty());
+// // the locally retrieved taxon should exist in the
+// // (local and remote) taxon list and should be not-null
+// Assert.assertTrue(taxa.contains(localTaxon));
+// Assert.assertNotNull(localTaxon);
+// Assert.assertTrue(commonService.contains((PersistentCollection)taxa, localTaxon));
+// }
+// }
+// }
+// }
+
+ @Test
+ public void persistentMapTest() {
+ List<TaxonNode> taxonNodes = classificationService.getAllNodes();
+ // calling iterator will initialise the collection
+ Iterator<TaxonNode> taxonNodesItr = taxonNodes.iterator();
+ while(taxonNodesItr.hasNext()) {
+ TaxonNode taxonNode = taxonNodesItr.next();
+ Taxon taxon = taxonNode.getTaxon();
+
+ if(taxon != null) {
+ Set<TaxonDescription> descriptions = taxon.getDescriptions();
+ Iterator<TaxonDescription> descriptionsItr = descriptions.iterator();
+ while(descriptionsItr.hasNext()) {
+ TaxonDescription desc = descriptionsItr.next();
+ if(desc != null) {
+ for (DescriptionElementBase element : desc.getElements()){
+ if (element.isInstanceOf(TextData.class)){
+ // usually a call to 'get' collections should not initialise the collection,
+ // but the 'getMultilanguageText' call internally calls readSize on the collection
+ // which triggers the initialisation
+ Map<Language, LanguageString> multilanguagetextMap = ((TextData)element).getMultilanguageText();
+ //boolean init = AbstractPersistentCollection.isInitialized(multilanguagetextMap);
+ //Assert.assertTrue(init);
+
+ if(!multilanguagetextMap.isEmpty()) {
+ // found a map whcih we can test!
+ logger.info("Found Non-empty multilanguagetextMap");
+ boolean empty = commonService.isEmpty(element.getUuid(), "multilanguageText");
+ Assert.assertFalse(empty);
+ // test retrieval of key set, which should already by initialised
+ Set<Language> langKeySet = multilanguagetextMap.keySet();
+ Iterator<Language> langKeySetItr = langKeySet.iterator();
+ while(langKeySetItr.hasNext()) {
+ Language key = langKeySetItr.next();
+ // testing 'containsKey' on locally initialised collection
+ boolean localContainsKey = multilanguagetextMap.containsKey(key);
+ Assert.assertTrue(localContainsKey);
+ // testing 'containsKey' on remotely initialised collection
+ boolean remoteContainsKey =
+ commonService.containsKey(element.getUuid(), "multilanguageText", key);
+ Assert.assertTrue(remoteContainsKey);
+
+ LanguageString value = multilanguagetextMap.get(key);
+ // testing 'containsValue' on locally initialised collection
+ boolean localContainsValue = multilanguagetextMap.containsValue(value);
+ Assert.assertTrue(localContainsValue);
+ // testing 'containsValue' on remotely initialised collection
+ boolean remoteContainsValue =
+ commonService.containsValue(element.getUuid(), "multilanguageText", value);
+ Assert.assertTrue(remoteContainsValue);
+
+ }
+ return;
+ }
+ }
+ }
+ }
+ }
+ }
+ }
+ }
+}
/**\r
- * \r
+ *\r
*/\r
package eu.etaxonomy.taxeditor.navigation.navigator.contextmenu;\r
\r
import org.eclipse.swtbot.eclipse.finder.widgets.SWTBotView;\r
import org.eclipse.swtbot.swt.finder.widgets.SWTBotTree;\r
import org.junit.Before;\r
+import org.junit.Ignore;\r
import org.junit.Test;\r
\r
import eu.etaxonomy.taxeditor.test.AbstractEditorTest;\r
* @author n.hoffmann\r
*\r
*/\r
+@Ignore\r
public class ClassificationTest extends AbstractEditorTest {\r
\r
private SWTBotView navigatorView;\r
private SWTBotTree tree;\r
\r
- @Before\r
+ @Override\r
+ @Before\r
public void setup() {\r
super.setup();\r
navigatorView = utils.view("Taxon Navigator");\r
tree = utils.tree(navigatorView.getWidget());\r
}\r
- \r
+\r
@Test\r
public void canDeleteClassification() throws Exception {\r
tree.select(0);\r
bot.waitUntil(Conditions.shellIsActive("Confirm Deletion"));\r
utils.ok();\r
}\r
- \r
+\r
@Test\r
public void canCreateClassification() throws Exception {\r
tree.setFocus();\r
/**\r
- * \r
+ *\r
*/\r
package eu.etaxonomy.taxeditor.newWizard;\r
\r
\r
import org.eclipse.swtbot.eclipse.finder.waits.Conditions;\r
import org.eclipse.swtbot.swt.finder.widgets.SWTBotButton;\r
+import org.junit.Ignore;\r
import org.junit.Test;\r
\r
import eu.etaxonomy.taxeditor.test.AbstractEditorTest;\r
* @author n.hoffmann\r
*\r
*/\r
+@Ignore\r
public class NewTaxonWizardTest extends AbstractEditorTest {\r
\r
@Override\r
bot.menu("General").menu("New").menu("Taxon").click();\r
bot.waitUntil(Conditions.shellIsActive("New Entity"));\r
}\r
- \r
+\r
@Test\r
public void unalteredDialogCanNotBefinished() {\r
boolean finishIsEnabled = bot.button("Finish").isEnabled();\r
Assert.assertEquals(false, finishIsEnabled);\r
utils.cancel();\r
}\r
- \r
+\r
@Test\r
public void canCreateNewTaxonMinimal(){\r
utils.openFilteredSelection(0, "Choose a Classification");\r
bot.textWithLabel("New Taxon").setText(newTaxonName);\r
bot.waitUntil(Conditions.widgetIsEnabled(bot.button("Finish")));\r
utils.finish();\r
- \r
+\r
// bot.waitUntil(Conditions.waitForEditor(WithPartId.withPartId(MultiPageTaxonEditor.ID)));\r
// Assert.assertEquals(newTaxonName, bot.activeEditor().getTitle());\r
}\r
- \r
- \r
\r
- \r
+\r
+\r
+\r
}\r
--- /dev/null
+// $Id$
+/**
+* Copyright (C) 2007 EDIT
+* European Distributed Institute of Taxonomy
+* http://www.e-taxonomy.eu
+*
+* The contents of this file are subject to the Mozilla Public License Version 1.1
+* See LICENSE.TXT at the top of this package for the full license terms.
+*/
+
+package eu.etaxonomy.taxeditor.operation;
+
+import org.eclipse.core.commands.operations.AbstractOperation;
+import org.eclipse.core.commands.operations.IUndoContext;
+import org.eclipse.core.runtime.IAdaptable;
+import org.eclipse.core.runtime.IProgressMonitor;
+import org.eclipse.core.runtime.NullProgressMonitor;
+import org.junit.Before;
+
+import eu.etaxonomy.cdm.api.conversation.IConversationEnabled;
+import eu.etaxonomy.taxeditor.httpinvoker.RemotingSessionAwareTest;
+import eu.etaxonomy.taxeditor.operation.IPostOperationEnabled;
+import eu.etaxonomy.taxeditor.operation.RemotingCdmUpdateOperation;
+import eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled;
+import eu.etaxonomy.taxeditor.test.MockConversationEnabled;
+
+/**
+ * @author n.hoffmann
+ * @created 15.04.2009
+ * @version 1.0
+ */
+public abstract class BaseOperationTest extends RemotingSessionAwareTest {
+
+ public static final IUndoContext undoContext = null;
+
+ public static final IProgressMonitor monitor = new NullProgressMonitor();
+ public static final IAdaptable info = null;
+ public static final IPostOperationEnabled postOperation = null;
+ public static final IConversationEnabled conversationEnabled = new MockConversationEnabled();
+ public static final ICdmEntitySessionEnabled cdmEntitySessionEnabled = null;
+
+ protected static AbstractOperation operation;
+
+ @Before
+ public void initializeOperations() {
+ RemotingCdmUpdateOperation.throwExceptions = true;
+ }
+
+}
--- /dev/null
+// $Id$
+/**
+* Copyright (C) 2015 EDIT
+* European Distributed Institute of Taxonomy
+* http://www.e-taxonomy.eu
+*
+* The contents of this file are subject to the Mozilla Public License Version 1.1
+* See LICENSE.TXT at the top of this package for the full license terms.
+*/
+package eu.etaxonomy.taxeditor.operation;
+
+import java.util.ArrayList;
+import java.util.List;
+import java.util.UUID;
+
+import org.eclipse.core.commands.ExecutionException;
+import org.junit.Assert;
+import org.junit.Ignore;
+import org.junit.Test;
+import org.unitils.dbunit.annotation.DataSet;
+
+import eu.etaxonomy.cdm.api.service.IPolytomousKeyService;
+import eu.etaxonomy.cdm.model.description.PolytomousKey;
+import eu.etaxonomy.taxeditor.navigation.key.polytomous.operation.RemotingDeletePolytomousKeyOperation;
+import eu.etaxonomy.taxeditor.navigation.key.polytomous.operation.RemotingUpdatePolytomousKeyAllNodesOperation;
+
+/**
+ * @author cmathew
+ * @date 25 Jun 2015
+ *
+ */
+@DataSet
+public class PolytomousKeyViewPartTest extends BaseOperationTest {
+
+ IPolytomousKeyService polytomousKeyService = getRemoteApplicationController().getPolytomousKeyService();
+ private static UUID pkey1Uuid = UUID.fromString("f82cef88-5a9e-4917-9938-d08bda40836f");
+ private static UUID pkey2Uuid = UUID.fromString("a00ca7ec-b660-433c-bd14-596826ab2243");
+ private static UUID pkey3Uuid = UUID.fromString("197bc542-bf5b-4a52-aa66-c65df32c196b");
+
+ @Ignore // waiting for #3998 to be fixed
+ @Test
+ public void testDeletePolytomousKey() throws ExecutionException {
+ List<PolytomousKey> pKeysBeforeDelete = polytomousKeyService.list(PolytomousKey.class, null, null, null, null);
+ int initialCount = pKeysBeforeDelete.size();
+
+ List<PolytomousKey> keysToDelete = new ArrayList<PolytomousKey>();
+ keysToDelete.add(polytomousKeyService.load(pkey1Uuid));
+ keysToDelete.add(polytomousKeyService.load(pkey2Uuid));
+ keysToDelete.add(polytomousKeyService.load(pkey3Uuid));
+
+ List<UUID> uuids = new ArrayList<UUID>();
+ uuids.add(pkey1Uuid);
+ uuids.add(pkey2Uuid);
+ uuids.add(pkey3Uuid);
+
+ int keysToDeleteCount = keysToDelete.size();
+ operation = new RemotingDeletePolytomousKeyOperation(sessionOwner,
+ false,
+ uuids);
+ operation.execute(monitor, info);
+
+ List<PolytomousKey> pKeysAfterDelete = polytomousKeyService.list(PolytomousKey.class, null, null, null, null);
+ Assert.assertEquals(initialCount - keysToDeleteCount, pKeysAfterDelete.size());
+ for(PolytomousKey key : keysToDelete) {
+ Assert.assertFalse(pKeysAfterDelete.contains(key));
+ }
+
+ }
+
+ @Test
+ public void testUpdateAllNodes() throws ExecutionException {
+ operation = new RemotingUpdatePolytomousKeyAllNodesOperation(sessionOwner,
+ false,
+ pkey1Uuid);
+ operation.execute(monitor, info);
+ }
+
+}
--- /dev/null
+// $Id$
+/**
+* Copyright (C) 2015 EDIT
+* European Distributed Institute of Taxonomy
+* http://www.e-taxonomy.eu
+*
+* The contents of this file are subject to the Mozilla Public License Version 1.1
+* See LICENSE.TXT at the top of this package for the full license terms.
+*/
+package eu.etaxonomy.taxeditor.operation;
+
+import java.util.HashSet;
+import java.util.Set;
+import java.util.UUID;
+
+import org.apache.log4j.Logger;
+import org.eclipse.core.commands.ExecutionException;
+import org.junit.Assert;
+import org.junit.BeforeClass;
+import org.junit.Test;
+import org.unitils.dbunit.annotation.DataSet;
+
+import eu.etaxonomy.cdm.api.service.ITaxonNodeService;
+import eu.etaxonomy.cdm.api.service.UpdateResult;
+import eu.etaxonomy.cdm.api.service.UpdateResult.Status;
+import eu.etaxonomy.cdm.api.service.dto.CdmEntityIdentifier;
+import eu.etaxonomy.cdm.model.taxon.TaxonNode;
+import eu.etaxonomy.taxeditor.remoting.cache.ProxyUtils;
+import eu.etaxonomy.taxeditor.store.operations.RemotingTestUpdateOperation;
+
+/**
+ * @author cmathew
+ * @date 26 Jun 2015
+ *
+ */
+@DataSet
+public class RemotingCdmUpdateOperationTest extends BaseOperationTest {
+
+ private static final Logger logger = Logger.getLogger(RemotingCdmUpdateOperationTest.class);
+
+ private static ITaxonNodeService taxonNodeService = getRemoteApplicationController().getTaxonNodeService();
+
+ private static UUID taxonNodeUuid1;
+ private static UUID taxonNodeUuid2;
+ private static UUID taxonNodeUuid3;
+ private static UUID taxonNodeUuid4;
+ private static UUID taxonNodeUuid5;
+
+
+ private static Set<TaxonNode> taxonNodes;
+ private static Set<CdmEntityIdentifier> ceis;
+
+ @BeforeClass
+ public static void initializeUpdatedObjects() {
+ taxonNodeUuid1 = UUID.fromString("b85b5b78-6760-409f-ac91-bb89e95ff2a1");
+ taxonNodeUuid2 = UUID.fromString("6ad8e9e2-f5f6-41ad-aa30-f62a903650db");
+ taxonNodeUuid3 = UUID.fromString("91698cec-615f-4472-9002-feda1a6acded");
+ taxonNodeUuid4 = UUID.fromString("b8439f51-6b96-445a-b401-7a836ba1cf58");
+ taxonNodeUuid5 = UUID.fromString("629b3fd3f-29b4-4011-ab12-9c1ad1607dbd");
+
+ }
+
+ @Test
+ public void testUpdateResultWithCdmEntities() throws ExecutionException {
+ TaxonNode taxonNode1 = (TaxonNode) ProxyUtils.deproxy(taxonNodeService.load(taxonNodeUuid1));
+ TaxonNode taxonNode2 = (TaxonNode) ProxyUtils.deproxy(taxonNodeService.load(taxonNodeUuid2));
+ TaxonNode taxonNode3 = (TaxonNode) ProxyUtils.deproxy(taxonNodeService.load(taxonNodeUuid3));
+ TaxonNode taxonNode4 = (TaxonNode) ProxyUtils.deproxy(taxonNodeService.load(taxonNodeUuid4));
+ TaxonNode taxonNode5 = (TaxonNode) ProxyUtils.deproxy(taxonNodeService.load(taxonNodeUuid5));
+
+ taxonNodes = new HashSet<TaxonNode>();
+ taxonNodes.add(taxonNode1);
+ taxonNodes.add(taxonNode2);
+ taxonNodes.add(taxonNode3);
+ taxonNodes.add(taxonNode4);
+ taxonNodes.add(taxonNode5);
+
+ UpdateResult result = new UpdateResult();
+ result.addUpdatedObjects(taxonNodes);
+ result.setStatus(Status.OK);
+
+ sessionOwner.setExpectedUpdatedObjects(taxonNodes);
+
+ operation = new RemotingTestUpdateOperation(result, sessionOwner, false);
+ operation.execute(monitor, info);
+
+ Assert.assertEquals(taxonNodes, sessionOwner.getEventUpdatedObjects());
+ }
+
+ @Test
+ public void testUpdateResultWithCdmIdentities() throws ExecutionException {
+ TaxonNode taxonNode1 = (TaxonNode) ProxyUtils.deproxy(taxonNodeService.load(taxonNodeUuid1));
+ TaxonNode taxonNode2 = (TaxonNode) ProxyUtils.deproxy(taxonNodeService.load(taxonNodeUuid2));
+ TaxonNode taxonNode3 = (TaxonNode) ProxyUtils.deproxy(taxonNodeService.load(taxonNodeUuid3));
+ TaxonNode taxonNode4 = (TaxonNode) ProxyUtils.deproxy(taxonNodeService.load(taxonNodeUuid4));
+ TaxonNode taxonNode5 = (TaxonNode) ProxyUtils.deproxy(taxonNodeService.load(taxonNodeUuid5));
+
+ taxonNodes = new HashSet<TaxonNode>();
+ taxonNodes.add(taxonNode1);
+ taxonNodes.add(taxonNode2);
+ taxonNodes.add(taxonNode3);
+ taxonNodes.add(taxonNode4);
+ taxonNodes.add(taxonNode5);
+
+ ceis = new HashSet<CdmEntityIdentifier>();
+ ceis.add(new CdmEntityIdentifier(taxonNode3.getId(),TaxonNode.class));
+ ceis.add(new CdmEntityIdentifier(taxonNode4.getId(),TaxonNode.class));
+ ceis.add(new CdmEntityIdentifier(taxonNode5.getId(),TaxonNode.class));
+
+ UpdateResult result = new UpdateResult();
+ result.addUpdatedObject(taxonNode1);
+ result.addUpdatedObject(taxonNode2);
+ result.addUpdatedCdmIds(ceis);
+
+ result.setStatus(Status.OK);
+ sessionOwner.setExpectedUpdatedObjects(taxonNodes);
+ operation = new RemotingTestUpdateOperation(result, sessionOwner, false);
+ operation.execute(monitor, info);
+
+ Assert.assertEquals(taxonNodes, sessionOwner.getEventUpdatedObjects());
+ }
+
+ @Test
+ public void testUpdateResultWithLoadedCdmIdentities() throws ExecutionException {
+ TaxonNode taxonNode1 = (TaxonNode) ProxyUtils.deproxy(taxonNodeService.load(taxonNodeUuid1));
+ TaxonNode taxonNode2 = (TaxonNode) ProxyUtils.deproxy(taxonNodeService.load(taxonNodeUuid2));
+ TaxonNode taxonNode3 = (TaxonNode) ProxyUtils.deproxy(taxonNodeService.load(taxonNodeUuid3));
+ TaxonNode taxonNode4 = (TaxonNode) ProxyUtils.deproxy(taxonNodeService.load(taxonNodeUuid4));
+ TaxonNode taxonNode5 = (TaxonNode) ProxyUtils.deproxy(taxonNodeService.load(taxonNodeUuid5));
+
+ taxonNodes = new HashSet<TaxonNode>();
+ taxonNodes.add(taxonNode1);
+ taxonNodes.add(taxonNode2);
+ taxonNodes.add(taxonNode3);
+ taxonNodes.add(taxonNode4);
+ taxonNodes.add(taxonNode5);
+
+ ceis = new HashSet<CdmEntityIdentifier>();
+ ceis.add(new CdmEntityIdentifier(taxonNode3.getId(),TaxonNode.class));
+ ceis.add(new CdmEntityIdentifier(taxonNode4.getId(),TaxonNode.class));
+ ceis.add(new CdmEntityIdentifier(taxonNode5.getId(),TaxonNode.class));
+
+
+ UpdateResult result = new UpdateResult();
+ result.addUpdatedObject(taxonNode1);
+ result.addUpdatedObject(taxonNode2);
+ result.addUpdatedCdmIds(ceis);
+ result.addUpdatedCdmId(new CdmEntityIdentifier(46,TaxonNode.class));
+
+ result.setStatus(Status.OK);
+ sessionOwner.setExpectedUpdatedObjects(taxonNodes);
+ operation = new RemotingTestUpdateOperation(result, sessionOwner, false);
+ operation.execute(monitor, info);
+
+ Assert.assertEquals(taxonNodes, sessionOwner.getEventUpdatedObjects());
+ }
+
+ @Test
+ public void testDataChange() throws ExecutionException {
+ TaxonNode taxonNode = (TaxonNode) ProxyUtils.deproxy(taxonNodeService.load(taxonNodeUuid1));
+ CdmEntityIdentifier cei = new CdmEntityIdentifier(taxonNode.getId(), TaxonNode.class);
+
+ taxonNodes = new HashSet<TaxonNode>();
+ taxonNodes.add(taxonNode);
+
+ int taxonNodeCountChildren = taxonNode.getCountChildren();
+ sessionOwner.setExpectedUpdatedObjects(taxonNodes);
+
+ operation = new RemotingTestUpdateOperation(cei, sessionOwner, false);
+ operation.execute(monitor, info);
+
+ Set eventUpdatedObjects = sessionOwner.getEventUpdatedObjects();
+ Assert.assertEquals(taxonNodes, eventUpdatedObjects);
+ Assert.assertEquals(taxonNodeCountChildren + 1, ((TaxonNode)eventUpdatedObjects.iterator().next()).getCountChildren());
+ }
+
+}
--- /dev/null
+// $Id$
+/**
+* Copyright (C) 2015 EDIT
+* European Distributed Institute of Taxonomy
+* http://www.e-taxonomy.eu
+*
+* The contents of this file are subject to the Mozilla Public License Version 1.1
+* See LICENSE.TXT at the top of this package for the full license terms.
+*/
+package eu.etaxonomy.taxeditor.operation;
+
+import java.util.ArrayList;
+import java.util.Iterator;
+import java.util.List;
+import java.util.Set;
+import java.util.UUID;
+
+import org.apache.log4j.Logger;
+import org.eclipse.core.commands.ExecutionException;
+import org.junit.Assert;
+import org.junit.Test;
+import org.unitils.dbunit.annotation.DataSet;
+
+import eu.etaxonomy.cdm.api.service.IClassificationService;
+import eu.etaxonomy.cdm.api.service.ITaxonNodeService;
+import eu.etaxonomy.cdm.api.service.ITaxonService;
+import eu.etaxonomy.cdm.model.common.Language;
+import eu.etaxonomy.cdm.model.name.BotanicalName;
+import eu.etaxonomy.cdm.model.name.HomotypicalGroup;
+import eu.etaxonomy.cdm.model.name.NonViralName;
+import eu.etaxonomy.cdm.model.name.TaxonNameBase;
+import eu.etaxonomy.cdm.model.taxon.Synonym;
+import eu.etaxonomy.cdm.model.taxon.Taxon;
+import eu.etaxonomy.cdm.model.taxon.TaxonNode;
+import eu.etaxonomy.taxeditor.editor.name.operation.CreateSynonymInExistingHomotypicalGroupOperation;
+
+/**
+ * @author cmathew
+ * @date 3 Feb 2015
+ *
+ */
+
+@DataSet
+public class TaxonNameEditorTest extends BaseOperationTest {
+
+ private static final Logger logger = Logger.getLogger(TaxonNameEditorTest.class);
+
+ ITaxonNodeService taxonNodeService = getRemoteApplicationController().getTaxonNodeService();
+ ITaxonService taxonService = getRemoteApplicationController().getTaxonService();
+ IClassificationService classificationService = getRemoteApplicationController().getClassificationService();
+
+ Language english = Language.getLanguageFromUuid(Language.uuidEnglish);
+
+
+ @Test
+ public void testAddHomotypicSynonym() throws ExecutionException {
+ UUID taxonNodeUuid = UUID.fromString("ce54c396-3694-47f2-abb0-1d7b7e057985");
+
+ TaxonNode taxonNode = taxonNodeService.load(taxonNodeUuid);
+ Taxon taxon = taxonNode.getTaxon();
+ HomotypicalGroup group = taxon.getHomotypicGroup();
+ BotanicalName newSynonymName = BotanicalName.NewInstance(null);
+ newSynonymName.setTitleCache("New Synonym", true);
+ operation = new CreateSynonymInExistingHomotypicalGroupOperation("Create Synonym In Existing Homotypical Group",
+ undoContext, taxon, group, newSynonymName, postOperation);
+
+ operation.execute(monitor, info);
+ taxonNodeService.merge(taxonNode);
+ Assert.assertEquals(taxon.getHomotypicGroup().getTypifiedNames().size(), 2);
+ Assert.assertEquals(taxon.getSynonyms().size(), 1);
+ Iterator<Synonym> synonymItr = taxon.getSynonyms().iterator();
+ Synonym synonym = synonymItr.next();
+ Assert.assertTrue(taxon.getHomotypicGroup().getTypifiedNames().contains(synonym.getName()));
+ }
+
+ @Test
+ public void addHeterotypicSynonym() throws ExecutionException {
+ UUID taxonNodeUuid = UUID.fromString("ce54c396-3694-47f2-abb0-1d7b7e057985");
+
+ TaxonNode taxonNode = taxonNodeService.load(taxonNodeUuid);
+ Taxon taxon = taxonNode.getTaxon();
+ HomotypicalGroup group = taxon.getHomotypicGroup();
+ BotanicalName newSynonymName = BotanicalName.NewInstance(null);
+ newSynonymName.setTitleCache("New Synonym", true);
+ operation = new CreateSynonymInExistingHomotypicalGroupOperation("Create Synonym In Existing Homotypical Group",
+ undoContext, taxon, group, newSynonymName, postOperation);
+
+ operation.execute(monitor, info);
+ taxonNodeService.merge(taxonNode);
+
+
+ }
+
+ @Test
+ public void addDeleteAddHomotypicSynonym() throws ExecutionException {
+ UUID taxonNodeUuid = UUID.fromString("ce54c396-3694-47f2-abb0-1d7b7e057985");
+
+ TaxonNode taxonNode = taxonNodeService.load(taxonNodeUuid);
+ Taxon taxon = taxonNode.getTaxon();
+ HomotypicalGroup group = taxon.getHomotypicGroup();
+ BotanicalName newSynonymName = BotanicalName.NewInstance(null);
+ newSynonymName.setTitleCache("New Synonym", true);
+ operation = new CreateSynonymInExistingHomotypicalGroupOperation("Create Synonym In Existing Homotypical Group",
+ undoContext, taxon, group, newSynonymName, postOperation);
+
+ operation.execute(monitor, info);
+ taxonNodeService.merge(taxonNode);
+ Assert.assertEquals(taxon.getHomotypicGroup().getTypifiedNames().size(), 2);
+
+ Set<Synonym> synonyms = taxon.getSynonyms();
+ for(Synonym synonym : synonyms) {
+ taxonService.deleteSynonym(synonym.getUuid(), taxon.getUuid(), null);
+ }
+
+ taxonNodeService.merge(taxonNode);
+
+ newSynonymName = BotanicalName.NewInstance(null);
+ newSynonymName.setTitleCache("Another New Synonym", true);
+ operation = new CreateSynonymInExistingHomotypicalGroupOperation("Create Synonym In Existing Homotypical Group",
+ undoContext, taxon, group, newSynonymName, postOperation);
+
+ operation.execute(monitor, info);
+ taxonNodeService.merge(taxonNode);
+ }
+
+ @Test
+ public void swapSynonymWithAcceptedTaxon() throws ExecutionException {
+ List<TaxonNode> rootEntities = new ArrayList<TaxonNode>();
+ UUID taxonNodeUuid = UUID.fromString("d425a971-1abe-4895-9e1f-1e5c8ff1c84c");
+ TaxonNode taxonNode = taxonNodeService.load(taxonNodeUuid);
+ rootEntities.add(taxonNode);
+
+ UUID taxonUuid = UUID.fromString("9763e5f0-6cd4-4d96-b8a4-4420854f7727");
+ Taxon taxon = (Taxon)taxonService.load(taxonUuid);
+ TaxonNameBase taxonName = taxon.getName();
+
+ UUID synonymUuid = UUID.fromString("1eb173bd-b174-4162-8ff5-5136d8f1e746");
+ Synonym synonym = (Synonym)taxonService.load(synonymUuid);
+ TaxonNameBase synonymName = synonym.getName();
+
+ taxonService.swapSynonymAndAcceptedTaxon(synonym.getUuid(), taxon.getUuid());
+
+ Assert.assertEquals(taxonName, synonym.getName());
+ Assert.assertEquals(synonymName, taxon.getName());
+ }
+
+ @Test
+ public void addTaxon() {
+ NonViralName taxonName = NonViralName.NewInstance(null);
+ Taxon taxon = Taxon.NewInstance(taxonName, null);
+ taxonService.merge(taxon);
+ }
+
+}
+
--- /dev/null
+// $Id$
+/**
+ * Copyright (C) 2015 EDIT
+ * European Distributed Institute of Taxonomy
+ * http://www.e-taxonomy.eu
+ *
+ * The contents of this file are subject to the Mozilla Public License Version 1.1
+ * See LICENSE.TXT at the top of this package for the full license terms.
+ */
+package eu.etaxonomy.taxeditor.operation;
+
+import java.util.ArrayList;
+import java.util.HashSet;
+import java.util.List;
+import java.util.Set;
+import java.util.UUID;
+
+import org.apache.log4j.Logger;
+import org.eclipse.core.commands.ExecutionException;
+import org.junit.Assert;
+import org.junit.Test;
+import org.unitils.dbunit.annotation.DataSet;
+
+import eu.etaxonomy.cdm.api.service.IClassificationService;
+import eu.etaxonomy.cdm.api.service.ITaxonNodeService;
+import eu.etaxonomy.cdm.api.service.ITaxonService;
+import eu.etaxonomy.cdm.api.service.config.TaxonDeletionConfigurator;
+import eu.etaxonomy.cdm.api.service.config.TaxonNodeDeletionConfigurator;
+import eu.etaxonomy.cdm.api.service.config.TaxonNodeDeletionConfigurator.ChildHandling;
+import eu.etaxonomy.cdm.model.common.CdmBase;
+import eu.etaxonomy.cdm.model.common.Language;
+import eu.etaxonomy.cdm.model.description.TaxonDescription;
+import eu.etaxonomy.cdm.model.name.TaxonNameBase;
+import eu.etaxonomy.cdm.model.taxon.Classification;
+import eu.etaxonomy.cdm.model.taxon.ITaxonTreeNode;
+import eu.etaxonomy.cdm.model.taxon.Taxon;
+import eu.etaxonomy.cdm.model.taxon.TaxonNode;
+import eu.etaxonomy.taxeditor.navigation.navigator.operation.RemotingChangeAcceptedTaxonToSynonymOperation;
+import eu.etaxonomy.taxeditor.navigation.navigator.operation.RemotingDeleteTaxonNodeOperation;
+import eu.etaxonomy.taxeditor.navigation.navigator.operation.RemotingMoveFactualDataOperation;
+import eu.etaxonomy.taxeditor.navigation.navigator.operation.RemotingMoveTaxonOperation;
+
+/**
+ * @author cmathew
+ * @date 9 Mar 2015
+ *
+ */
+@DataSet
+public class TaxonNavigatorTest extends BaseOperationTest {
+
+ private static final Logger logger = Logger.getLogger(TaxonNameEditorTest.class);
+
+ ITaxonNodeService taxonNodeService = getRemoteApplicationController().getTaxonNodeService();
+ ITaxonService taxonService = getRemoteApplicationController().getTaxonService();
+ IClassificationService classificationService = getRemoteApplicationController().getClassificationService();
+
+ Language english = Language.getLanguageFromUuid(Language.uuidEnglish);
+
+
+
+ @Test
+ public void testChangeAcceptedTaxonToSynonym() throws ExecutionException {
+
+
+ UUID oldTaxonNodeNodeUuid = UUID.fromString("b85b5b78-6760-409f-ac91-bb89e95ff2a1");
+ UUID newAcceptedTaxonNodeUuid = UUID.fromString("6ad8e9e2-f5f6-41ad-aa30-f62a903650db");
+
+ TaxonNode oldTaxonNode = taxonNodeService.load(oldTaxonNodeNodeUuid);
+ TaxonNameBase name = oldTaxonNode.getTaxon().getName();
+
+
+ TaxonNode newAcceptedTaxonNode = taxonNodeService.load(newAcceptedTaxonNodeUuid);
+ int countTargetSynonyms = newAcceptedTaxonNode.getTaxon().getSynonyms().size();
+ sessionOwner.addExpectedUpdatedObject(oldTaxonNode.getParent());
+ sessionOwner.addExpectedUpdatedObject(newAcceptedTaxonNode);
+
+ operation = new RemotingChangeAcceptedTaxonToSynonymOperation(sessionOwner,
+ false,
+ oldTaxonNode.getUuid(),
+ newAcceptedTaxonNode.getUuid());
+ operation.execute(monitor, info);
+ newAcceptedTaxonNode = taxonNodeService.load(newAcceptedTaxonNodeUuid);
+ oldTaxonNode = taxonNodeService.load(oldTaxonNodeNodeUuid);
+ Assert.assertNull(oldTaxonNode);
+ Assert.assertEquals(countTargetSynonyms + 1,newAcceptedTaxonNode.getTaxon().getSynonyms().size());
+ Assert.assertEquals(name, newAcceptedTaxonNode.getTaxon().getSynonyms().iterator().next().getName());
+
+
+ }
+
+ @Test
+ public void testMoveTaxon() throws ExecutionException {
+
+ UUID taxonNodeToMoveUuid = UUID.fromString("b8439f51-6b96-445a-b401-7a836ba1cf58");
+ UUID newParentTreeNodeUuid = UUID.fromString("2f05d429-632d-4230-b9cb-70299360b470");
+ boolean moveToParentNode = true;
+
+ TaxonNode taxonNodeToMove = taxonNodeService.load(taxonNodeToMoveUuid);
+ TaxonNode oldParent = taxonNodeToMove.getParent();
+ sessionOwner.addExpectedUpdatedObject(oldParent);
+ int childCount = oldParent.getCountChildren();
+ TaxonNode newParentTreeNode = taxonNodeService.load(newParentTreeNodeUuid);
+ sessionOwner.addExpectedUpdatedObject(newParentTreeNode);
+ operation = new RemotingMoveTaxonOperation(sessionOwner,
+ false,
+ taxonNodeToMove.getUuid(),
+ newParentTreeNode.getUuid(),
+ moveToParentNode);
+ operation.execute(monitor, info);
+ Assert.assertEquals(childCount-1, oldParent.getCountChildren());
+ Assert.assertTrue(!oldParent.getChildNodes().contains(taxonNodeToMove));
+ Assert.assertTrue(newParentTreeNode.getChildNodes().contains(taxonNodeToMove));
+ }
+
+ @Test
+ public void testMoveFactualData() throws ExecutionException {
+ UUID sourceTaxonUuid = UUID.fromString("e40854d7-143f-4054-b229-6ed4cedb4bff");
+ UUID targetTaxonUuid = UUID.fromString("b8402dc4-5050-4882-a147-01b71e0e47d6");
+
+ Taxon sourceTaxon = CdmBase.deproxy(taxonService.load(sourceTaxonUuid), Taxon.class);
+ Set<TaxonDescription> sourceDescriptions = new HashSet(sourceTaxon.getDescriptions());
+ sessionOwner.addExpectedUpdatedObject(sourceTaxon);
+
+ Taxon targetTaxon = CdmBase.deproxy(taxonService.load(targetTaxonUuid), Taxon.class);
+ int countTargetDescriptions = targetTaxon.getDescriptions().size();
+ sessionOwner.addExpectedUpdatedObject(targetTaxon);
+
+ operation = new RemotingMoveFactualDataOperation(sessionOwner,
+ false,
+ sourceTaxonUuid,
+ targetTaxonUuid);
+ operation.execute(monitor, info);
+ Assert.assertEquals(0, sourceTaxon.getDescriptions().size());
+ Assert.assertEquals(sourceDescriptions.size() + countTargetDescriptions, targetTaxon.getDescriptions().size());
+ Assert.assertTrue(targetTaxon.getDescriptions().containsAll(sourceDescriptions));
+ }
+
+ @Test
+ public void testDeleteTaxonNodeWithDeleteChildren() throws ExecutionException {
+ UUID taxonNodeUuid = UUID.fromString("2f05d429-632d-4230-b9cb-70299360b470");
+ TaxonNode taxonNode = taxonNodeService.load(taxonNodeUuid);
+ List<TaxonNode> childNodes = taxonNode.getChildNodes();
+ List<UUID> childNodeUuids = new ArrayList<UUID>();
+ for(TaxonNode childNode : childNodes) {
+ childNodeUuids.add(childNode.getUuid());
+ }
+ Assert.assertTrue(taxonNode.getCountChildren() > 0);
+
+ Set<ITaxonTreeNode> nodes = new HashSet<ITaxonTreeNode>();
+ nodes.add(taxonNode);
+
+ TaxonNodeDeletionConfigurator configNodes = new TaxonNodeDeletionConfigurator();
+ configNodes.setChildHandling(ChildHandling.DELETE);
+ TaxonDeletionConfigurator config = new TaxonDeletionConfigurator();
+ config.setTaxonNodeConfig(configNodes);
+
+ sessionOwner.addExpectedUpdatedObject(taxonNode.getParent());
+
+ operation = new RemotingDeleteTaxonNodeOperation(sessionOwner,
+ false,
+ nodes,
+ config);
+ operation.execute(monitor, info);
+ TaxonNode reloadedNode = taxonNodeService.load(taxonNode.getUuid());
+ Assert.assertNull(reloadedNode);
+ for(UUID childNodeUuid : childNodeUuids) {
+ TaxonNode reloadedChildNode = taxonNodeService.load(childNodeUuid);
+ Assert.assertNull(reloadedChildNode);
+ }
+ }
+
+ @Test
+ public void testDeleteTaxonNodes() throws ExecutionException {
+ UUID taxonNode1Uuid = UUID.fromString("99f03b56-67cd-4e01-9ceb-2362d48f9d07");
+ UUID taxonNode2Uuid = UUID.fromString("91698cec-615f-4472-9002-feda1a6acded");
+ UUID taxonNode3Uuid = UUID.fromString("4fe03763-b966-4361-8334-352f6f777588");
+
+ TaxonNode taxonNode1 = taxonNodeService.load(taxonNode1Uuid);
+ TaxonNode taxonNode2 = taxonNodeService.load(taxonNode2Uuid);
+ TaxonNode taxonNode3 = taxonNodeService.load(taxonNode3Uuid);
+
+ Set<ITaxonTreeNode> nodes = new HashSet<ITaxonTreeNode>();
+ nodes.add(taxonNode1);
+ nodes.add(taxonNode2);
+ nodes.add(taxonNode3);
+
+ TaxonDeletionConfigurator config = new TaxonDeletionConfigurator();
+
+
+ sessionOwner.addExpectedUpdatedObject(taxonNode1.getParent());
+ sessionOwner.addExpectedUpdatedObject(taxonNode2.getParent());
+ sessionOwner.addExpectedUpdatedObject(taxonNode3.getParent());
+ operation = new RemotingDeleteTaxonNodeOperation(sessionOwner,
+ false,
+ nodes,
+ config);
+ operation.execute(monitor, info);
+ TaxonNode reloadedNode1 = taxonNodeService.load(taxonNode1.getUuid());
+ TaxonNode reloadedNode2 = taxonNodeService.load(taxonNode2.getUuid());
+ TaxonNode reloadedNode3 = taxonNodeService.load(taxonNode3.getUuid());
+ Assert.assertNull(reloadedNode1);
+ Assert.assertNull(reloadedNode2);
+ Assert.assertNull(reloadedNode3);
+
+ }
+
+ @Test
+ public void testDeleteTaxonNodeWithMovingChildrenToParentNode() throws ExecutionException {
+ UUID taxonNodeUuid = UUID.fromString("2f05d429-632d-4230-b9cb-70299360b470");
+ TaxonNode taxonNode = taxonNodeService.load(taxonNodeUuid);
+ TaxonNode parentTaxonNode = taxonNode.getParent();
+ List<TaxonNode> childNodes = taxonNode.getChildNodes();
+ List<UUID> childNodeUuids = new ArrayList<UUID>();
+ for(TaxonNode childNode : childNodes) {
+ childNodeUuids.add(childNode.getUuid());
+ }
+ Assert.assertTrue(taxonNode.getCountChildren() > 0);
+
+ Set<ITaxonTreeNode> nodes = new HashSet<ITaxonTreeNode>();
+ nodes.add(taxonNode);
+
+ TaxonNodeDeletionConfigurator configNodes = new TaxonNodeDeletionConfigurator();
+ configNodes.setChildHandling(ChildHandling.MOVE_TO_PARENT);
+ TaxonDeletionConfigurator config = new TaxonDeletionConfigurator();
+ config.setTaxonNodeConfig(configNodes);
+
+ sessionOwner.addExpectedUpdatedObject(taxonNode.getParent());
+ operation = new RemotingDeleteTaxonNodeOperation(sessionOwner,
+ false,
+ nodes,
+ config);
+ operation.execute(monitor, info);
+ TaxonNode reloadedNode = taxonNodeService.load(taxonNode.getUuid());
+ Assert.assertNull(reloadedNode);
+ List<TaxonNode> parentChildNodes = parentTaxonNode.getChildNodes();
+ List<UUID> parentChildNodeUuids = new ArrayList<UUID>();
+ for(TaxonNode parentChildNode : parentChildNodes) {
+ parentChildNodeUuids.add(parentChildNode.getUuid());
+ }
+ parentChildNodeUuids.containsAll(childNodeUuids);
+
+ }
+
+ @Test
+ @DataSet("TaxonNavigatorTest.testDeleteClassificationWithDeleteChildren.xml")
+ public void testDeleteClassificationWithDeleteChildren() throws ExecutionException {
+ UUID classificationUuid = UUID.fromString("0c2b5d25-7b15-4401-8b51-dd4be0ee5cab");
+ Classification classification = classificationService.load(classificationUuid);
+ TaxonNode rootNode = classification.getRootNode();
+ Set<ITaxonTreeNode> nodes = new HashSet<ITaxonTreeNode>();
+ nodes.add(classification);
+
+ TaxonNodeDeletionConfigurator configNodes = new TaxonNodeDeletionConfigurator();
+ configNodes.setChildHandling(ChildHandling.DELETE);
+ TaxonDeletionConfigurator config = new TaxonDeletionConfigurator();
+ config.setTaxonNodeConfig(configNodes);
+
+ operation = new RemotingDeleteTaxonNodeOperation(sessionOwner,
+ false,
+ nodes,
+ config);
+ operation.execute(monitor, info);
+
+ Classification reloadedClassification = classificationService.load(classification.getUuid());
+ Assert.assertNull(reloadedClassification);
+ TaxonNode reloadedRootNode = taxonNodeService.load(rootNode.getUuid());
+ Assert.assertNull(reloadedRootNode);
+
+ }
+
+
+}
--- /dev/null
+// $Id$
+/**
+* Copyright (C) 2015 EDIT
+* European Distributed Institute of Taxonomy
+* http://www.e-taxonomy.eu
+*
+* The contents of this file are subject to the Mozilla Public License Version 1.1
+* See LICENSE.TXT at the top of this package for the full license terms.
+*/
+package eu.etaxonomy.taxeditor.service;
+
+import java.io.FileOutputStream;
+import java.io.IOException;
+import java.util.HashSet;
+import java.util.List;
+import java.util.UUID;
+
+import org.junit.Assert;
+import org.junit.Test;
+import org.unitils.dbunit.annotation.DataSet;
+
+import eu.etaxonomy.cdm.api.application.CdmApplicationState;
+import eu.etaxonomy.cdm.api.service.INameService;
+import eu.etaxonomy.cdm.io.common.ExportResult;
+import eu.etaxonomy.cdm.io.csv.caryophyllales.out.CsvNameExportConfigurator;
+import eu.etaxonomy.cdm.io.csv.redlist.demo.CsvDemoExportConfigurator;
+import eu.etaxonomy.cdm.io.jaxb.JaxbExportConfigurator;
+import eu.etaxonomy.cdm.io.sdd.out.SDDExportConfigurator;
+import eu.etaxonomy.cdm.io.service.IIOService;
+import eu.etaxonomy.taxeditor.httpinvoker.BaseRemotingTest;
+
+/**
+ * @author cmathew
+ * @date 31 Jul 2015
+ *
+ */
+@DataSet
+public class IOServiceExportTest extends BaseRemotingTest {
+
+ private final IIOService ioService = CdmApplicationState.getIOService();
+ private final INameService nameService = CdmApplicationState.getCurrentAppConfig().getNameService();
+
+ @Test
+ public void exportJaxbTest() throws IOException {
+ JaxbExportConfigurator config = JaxbExportConfigurator.NewInstance(null, null);
+ ExportResult result = ioService.export(config);
+ List<byte[]> dataList = result.getExportData();
+ Assert.assertEquals(1, dataList.size());
+ byte[] exportData = dataList.get(0);
+ String savePath = "target/exportjaxb.xml";
+ FileOutputStream stream = null;
+
+ stream = new FileOutputStream(savePath);
+ stream.write(exportData);
+ stream.close();
+ }
+
+ @Test
+ public void exportSDDTest() throws IOException {
+ SDDExportConfigurator config = SDDExportConfigurator.NewInstance(null, null, null);
+ ExportResult result = ioService.export(config);
+ List<byte[]> dataList = result.getExportData();
+ Assert.assertEquals(1, dataList.size());
+ byte[] exportData = dataList.get(0);
+ String savePath = "target/exportsdd.xml";
+ FileOutputStream stream = null;
+
+ stream = new FileOutputStream(savePath);
+ stream.write(exportData);
+ stream.close();
+
+ }
+
+ @Test
+ public void exportCSVTest() throws IOException {
+ HashSet<UUID> set = new HashSet<UUID>();
+ set.add(UUID.fromString("0c2b5d25-7b15-4401-8b51-dd4be0ee5cab"));
+ CsvDemoExportConfigurator config = CsvDemoExportConfigurator.NewInstance(null, null);
+ config.setClassificationUuids(set);
+ config.setDoTaxa(true);
+ config.setHasHeaderLines(true);
+ config.setClassification(true);
+ config.setTaxonName(true);
+ config.setAuthor(true);
+ config.setRank(true);
+ config.setLastChange(true);
+
+ ExportResult result = ioService.export(config);
+ List<byte[]> dataList = result.getExportData();
+ Assert.assertEquals(1, dataList.size());
+ byte[] exportData = dataList.get(0);
+ String savePath = "target/exportcsv.xml";
+ saveToFile(savePath, exportData);
+ }
+
+ @Test
+ public void exportCSVNameTest() throws IOException {
+ CsvNameExportConfigurator config = CsvNameExportConfigurator.NewInstance(null,null);
+ ExportResult result = ioService.export(config);
+ List<byte[]> dataList = result.getExportData();
+ Assert.assertEquals(1, dataList.size());
+ byte[] exportData = dataList.get(0);
+ String savePath = "target/exportcsvname.xml";
+ saveToFile(savePath, exportData);
+ }
+
+ @Test
+ public void exportCSVPrintTest() throws IOException {
+ CsvNameExportConfigurator config = CsvNameExportConfigurator.NewInstance(null,null);
+ config.setNamesOnly(false);
+ config.setClassificationUUID(UUID.fromString("0c2b5d25-7b15-4401-8b51-dd4be0ee5cab"));
+ ExportResult result = ioService.export(config);
+ List<byte[]> dataList = result.getExportData();
+ Assert.assertEquals(1, dataList.size());
+ byte[] exportData = dataList.get(0);
+ String savePath = "target/exportcsvprint.xml";
+ saveToFile(savePath, exportData);
+ }
+
+ private static void saveToFile(String filePath, byte[] data) throws IOException {
+ FileOutputStream stream = null;
+ stream = new FileOutputStream(filePath);
+ stream.write(data);
+ stream.close();
+ }
+}
--- /dev/null
+// $Id$
+/**
+* Copyright (C) 2015 EDIT
+* European Distributed Institute of Taxonomy
+* http://www.e-taxonomy.eu
+*
+* The contents of this file are subject to the Mozilla Public License Version 1.1
+* See LICENSE.TXT at the top of this package for the full license terms.
+*/
+package eu.etaxonomy.taxeditor.service;
+
+import java.io.FileNotFoundException;
+import java.io.FileOutputStream;
+import java.io.IOException;
+import java.nio.file.Files;
+import java.nio.file.Path;
+import java.nio.file.Paths;
+import java.util.List;
+
+import org.junit.Assert;
+import org.junit.Ignore;
+import org.junit.Test;
+import org.unitils.dbunit.annotation.DataSet;
+
+import eu.etaxonomy.cdm.api.application.CdmApplicationState;
+import eu.etaxonomy.cdm.api.service.INameService;
+import eu.etaxonomy.cdm.api.service.IOccurrenceService;
+import eu.etaxonomy.cdm.database.DbSchemaValidation;
+import eu.etaxonomy.cdm.io.common.IImportConfigurator.SOURCE_TYPE;
+import eu.etaxonomy.cdm.io.common.ImportResult;
+import eu.etaxonomy.cdm.io.excel.taxa.NormalExplicitImportConfigurator;
+import eu.etaxonomy.cdm.io.sdd.in.SDDImportConfigurator;
+import eu.etaxonomy.cdm.io.service.IIOService;
+import eu.etaxonomy.cdm.io.specimen.abcd206.in.Abcd206ImportConfigurator;
+import eu.etaxonomy.cdm.io.specimen.excel.in.SpecimenCdmExcelImportConfigurator;
+import eu.etaxonomy.cdm.io.tcsxml.in.TcsXmlImportConfigurator;
+import eu.etaxonomy.cdm.model.name.NomenclaturalCode;
+import eu.etaxonomy.cdm.model.name.TaxonNameBase;
+import eu.etaxonomy.taxeditor.httpinvoker.BaseRemotingTest;
+
+/**
+ *
+ * Note : One issue with this test class is that when the tests are run a second time
+ * against the same server there are errors due to the fact that not all the imported data is deleted.
+ * This needs to be fixed
+ * @author cmathew
+ * @date 5 Aug 2015
+ *
+ */
+@Ignore // seems to cause problems with other tests due to data not deleted
+@DataSet
+public class IOServiceImportTest extends BaseRemotingTest {
+
+ private final IIOService ioService = CdmApplicationState.getIOService();
+ private final INameService nameService = CdmApplicationState.getCurrentAppConfig().getNameService();
+ private final IOccurrenceService occurrenceService = CdmApplicationState.getCurrentAppConfig().getOccurrenceService();
+
+ @Test
+ public void importNormalExplicit() throws IOException {
+ String importFilePath = "src/test/resources/imports/NormalExplicitImport.xls";
+ NormalExplicitImportConfigurator config =
+ NormalExplicitImportConfigurator.NewInstance(null, null, null, null);
+ config.setNomenclaturalCode(NomenclaturalCode.ICNB);
+ config.setDbSchemaValidation(DbSchemaValidation.CREATE);
+ ImportResult result = ioService.importData(config, fileToByteArray(importFilePath), SOURCE_TYPE.URI);
+ Assert.assertTrue(result.isSuccess());
+ List<TaxonNameBase> list = nameService.list(TaxonNameBase.class, null, null, null, null);
+ Assert.assertEquals(9,list.size());
+ }
+
+
+ @Test
+ public void importAbcd() throws IOException {
+ String importFilePath = "src/test/resources/imports/ABCDImport.xml";
+ Abcd206ImportConfigurator config =
+ Abcd206ImportConfigurator.NewInstance(null, null);
+ config.setNomenclaturalCode(NomenclaturalCode.ICNB);
+ config.setDbSchemaValidation(DbSchemaValidation.CREATE);
+ ImportResult result = ioService.importData(config, fileToByteArray(importFilePath), SOURCE_TYPE.INPUTSTREAM);
+ Assert.assertTrue(result.isSuccess());
+ Assert.assertTrue(!result.getReports().isEmpty());
+ saveToFile("target/importAbcdReport.txt", result.getReports().get(0));
+ List<TaxonNameBase> list = nameService.list(TaxonNameBase.class, null, null, null, null);
+ Assert.assertEquals(2,list.size());
+ }
+
+ @Test
+ public void importSDD() throws IOException {
+ String importFilePath = "src/test/resources/imports/SDD.xml";
+ SDDImportConfigurator config =
+ SDDImportConfigurator.NewInstance(null, null);
+ config.setNomenclaturalCode(NomenclaturalCode.ICNB);
+ config.setDbSchemaValidation(DbSchemaValidation.CREATE);
+ ImportResult result = ioService.importData(config, fileToByteArray(importFilePath), SOURCE_TYPE.URI);
+ Assert.assertTrue(result.isSuccess());
+ List<TaxonNameBase> list = nameService.list(TaxonNameBase.class, null, null, null, null);
+ Assert.assertEquals(9,list.size());
+ }
+
+ @Test
+ public void importSpecimenExcel() throws IOException {
+ String importFilePath = "src/test/resources/imports/SpecimenExcelImport.xls";
+ SpecimenCdmExcelImportConfigurator config = SpecimenCdmExcelImportConfigurator.NewInstance(null, null);
+ config.setNomenclaturalCode(NomenclaturalCode.ICNB);
+ config.setDbSchemaValidation(DbSchemaValidation.CREATE);
+ ImportResult result = ioService.importData(config, fileToByteArray(importFilePath), SOURCE_TYPE.URI);
+ Assert.assertTrue(result.isSuccess());
+// List<SpecimenOrObservationBase> occurrences = occurrenceService.list(SpecimenOrObservationBase.class, null, null, null, null);
+// Assert.assertEquals(3,occurrences.size());
+ }
+
+ @Test
+ public void importTCS() throws IOException {
+ String importFilePath = "src/test/resources/imports/TcsImport.xml";
+ TcsXmlImportConfigurator config = TcsXmlImportConfigurator.NewInstance(null, null);
+ config.setNomenclaturalCode(NomenclaturalCode.ICNB);
+ config.setDbSchemaValidation(DbSchemaValidation.CREATE);
+ ImportResult result = ioService.importData(config, fileToByteArray(importFilePath), SOURCE_TYPE.URI);
+ Assert.assertTrue(result.isSuccess());
+ List<TaxonNameBase> list = nameService.list(TaxonNameBase.class, null, null, null, null);
+ Assert.assertEquals(16,list.size());
+ }
+
+ private byte[] fileToByteArray(String filePath) throws IOException {
+ Path path = Paths.get(filePath);
+ return Files.readAllBytes(path);
+ }
+
+ private static void saveToFile(String filePath, byte[] data) {
+ FileOutputStream stream = null;
+ try {
+ stream = new FileOutputStream(filePath);
+ stream.write(data);
+ } catch (FileNotFoundException e) {
+ e.printStackTrace();
+ } catch (IOException e) {
+ e.printStackTrace();
+ } finally {
+ try {
+ if(stream != null) {
+ stream.close();
+ }
+ } catch (IOException e) {
+ e.printStackTrace();
+ }
+ }
+ }
+
+}
--- /dev/null
+package eu.etaxonomy.taxeditor.service;
+
+import java.util.List;
+import java.util.UUID;
+
+import org.apache.log4j.Logger;
+import org.junit.Assert;
+import org.junit.Test;
+
+import eu.etaxonomy.cdm.api.application.CdmApplicationState;
+import eu.etaxonomy.cdm.api.cache.CdmServiceCacher;
+import eu.etaxonomy.cdm.api.service.ITermService;
+import eu.etaxonomy.cdm.model.common.DefinedTermBase;
+import eu.etaxonomy.cdm.model.common.Language;
+import eu.etaxonomy.cdm.model.common.TermType;
+import eu.etaxonomy.taxeditor.httpinvoker.RemotingSessionAwareTest;
+
+public class ServiceInterceptorTest extends RemotingSessionAwareTest {
+
+ private static final Logger logger = Logger.getLogger(ServiceInterceptorTest.class);
+ private final ITermService termService = getRemoteApplicationController().getTermService();
+ private static CdmServiceCacher cdmServiceCacher = CdmApplicationState.getCdmServiceCacher();
+
+
+ @Test
+ public void termServiceInterceptorTest() {
+ List<DefinedTermBase<?>> terms = termService.listByTermType(TermType.Language, null, null, null, null);
+ int cacheLanguageSize = 0;
+ List<UUID> keys = cdmServiceCacher.getDefaultCache().getKeys();
+ for(UUID key : keys) {
+ if(cdmServiceCacher.getFromCache(key).getClass().equals(Language.class)) {
+ cacheLanguageSize++;
+ }
+ }
+ Assert.assertEquals(terms.size(), cacheLanguageSize);
+ // TO DO : get the static termTypeMap from TermServiceRequestExecutor and check the size
+ }
+}
--- /dev/null
+// $Id$
+/**
+ * Copyright (C) 2014 EDIT
+ * European Distributed Institute of Taxonomy
+ * http://www.e-taxonomy.eu
+ *
+ * The contents of this file are subject to the Mozilla Public License Version 1.1
+ * See LICENSE.TXT at the top of this package for the full license terms.
+ */
+package eu.etaxonomy.taxeditor.session;
+
+import java.util.ArrayList;
+import java.util.Iterator;
+import java.util.List;
+import java.util.Map;
+import java.util.Set;
+import java.util.UUID;
+
+import org.apache.log4j.Logger;
+import org.hibernate.collection.spi.PersistentCollection;
+import org.junit.Assert;
+import org.junit.BeforeClass;
+import org.junit.Ignore;
+import org.junit.Test;
+import org.unitils.dbunit.annotation.DataSet;
+
+import eu.etaxonomy.cdm.api.application.CdmApplicationState;
+import eu.etaxonomy.cdm.api.service.ICommonService;
+import eu.etaxonomy.cdm.api.service.IPolytomousKeyNodeService;
+import eu.etaxonomy.cdm.api.service.IPolytomousKeyService;
+import eu.etaxonomy.cdm.api.service.ITaxonService;
+import eu.etaxonomy.cdm.api.service.ITermService;
+import eu.etaxonomy.cdm.api.service.IUserService;
+import eu.etaxonomy.cdm.api.service.IVocabularyService;
+import eu.etaxonomy.cdm.model.agent.AgentBase;
+import eu.etaxonomy.cdm.model.agent.Person;
+import eu.etaxonomy.cdm.model.common.CdmBase;
+import eu.etaxonomy.cdm.model.common.Credit;
+import eu.etaxonomy.cdm.model.common.DefinedTermBase;
+import eu.etaxonomy.cdm.model.common.Extension;
+import eu.etaxonomy.cdm.model.common.IdentifiableSource;
+import eu.etaxonomy.cdm.model.common.Language;
+import eu.etaxonomy.cdm.model.common.LanguageString;
+import eu.etaxonomy.cdm.model.common.TermType;
+import eu.etaxonomy.cdm.model.common.TermVocabulary;
+import eu.etaxonomy.cdm.model.description.KeyStatement;
+import eu.etaxonomy.cdm.model.description.PolytomousKey;
+import eu.etaxonomy.cdm.model.description.PolytomousKeyNode;
+import eu.etaxonomy.cdm.model.media.Rights;
+import eu.etaxonomy.cdm.model.taxon.Taxon;
+import eu.etaxonomy.taxeditor.httpinvoker.RemotingSessionAwareTest;
+
+/**
+ * @author cmathew
+ * @date 7 Oct 2014
+ *
+ */
+@DataSet
+public class CdmEntitySessionAwareTest extends RemotingSessionAwareTest {
+
+ private static final Logger logger = Logger.getLogger(CdmEntitySessionAwareTest.class);
+
+ UUID polytomousKeyUuid = UUID.fromString("0d53ba20-7de4-4baa-bd8a-401048447d66");
+ UUID subKeyUuid = UUID.fromString("9d8bf4f6-a70a-4b80-8556-2ccfb436ff01");
+ //UUID polytomousKeyUuid = UUID.fromString("bab66772-2c83-428a-bb6d-655d12ac6097");
+ UUID taxon1Uuid = UUID.fromString("2b336df7-29e8-4f79-985f-66502739d22f");
+ UUID personUuid = UUID.fromString("945d08f2-eb92-45b6-9252-6275ea6d338b");
+
+
+
+ IPolytomousKeyService polytomousKeyService = getRemoteApplicationController().getPolytomousKeyService();
+ IPolytomousKeyNodeService polytomousKeyNodeService = getRemoteApplicationController().getPolytomousKeyNodeService();
+ ICommonService commonService = getRemoteApplicationController().getCommonService();
+ ITaxonService taxonService = getRemoteApplicationController().getTaxonService();
+ IVocabularyService vocabularyService = getRemoteApplicationController().getVocabularyService();
+ ITermService termService = getRemoteApplicationController().getTermService();
+ IUserService userService = getRemoteApplicationController().getUserService();
+
+ //Language english = Language.getLanguageFromUuid(Language.uuidEnglish);
+
+
+
+ @BeforeClass
+ public static void initializePolytomousKeyTest() {
+ }
+
+
+ @Test
+ public void readAllPolytomousKeys() {
+ List<PolytomousKey> pKeys = polytomousKeyService.list(PolytomousKey.class, null, null, null, null);
+ Iterator<PolytomousKey> pKeysItr = pKeys.iterator();
+ Assert.assertEquals(pKeysItr.next().getUuid(),UUID.fromString("9d8bf4f6-a70a-4b80-8556-2ccfb436ff01"));
+ Assert.assertEquals(pKeysItr.next().getUuid(),UUID.fromString("0d53ba20-7de4-4baa-bd8a-401048447d66"));
+ }
+
+
+ @Test
+ //@DataSet("PolytomousKeyTest.readPolytmousKeyData.xml")
+ public void readPolytmousKeyData() {
+ PolytomousKey pKey = CdmBase.deproxy(polytomousKeyService.find(polytomousKeyUuid),PolytomousKey.class);
+ Set<Taxon> taxonomicScope = pKey.getTaxonomicScope();
+ Iterator<Taxon> tsItr = taxonomicScope.iterator();
+ Taxon taxon = tsItr.next();
+
+ Assert.assertEquals("Achillea sec. Cyprus", taxon.getTitleCache());
+ Assert.assertEquals(tsItr.hasNext(), false);
+
+ List<Credit> credits = pKey.getCredits();
+ AgentBase agent = credits.get(0).getAgent();
+ Assert.assertEquals(agent.getId(),4809);
+ Assert.assertEquals(agent.getTitleCache(),"R. A. Graham");
+ Assert.assertEquals(credits.get(0).getText(),"Credits Text Test");
+
+ Set<Extension> exts = pKey.getExtensions();
+ Iterator<Extension> extItr = exts.iterator();
+ Extension ext = extItr.next();
+ Assert.assertEquals(ext.getValue(), "http://test.com");
+
+ Set<Rights> rights = pKey.getRights();
+ Iterator<Rights> rightsItr = rights.iterator();
+ Rights right = rightsItr.next();
+ Assert.assertEquals(right.getText(),"Rights Text Test");
+
+ Set<IdentifiableSource> sources = pKey.getSources();
+ Iterator<IdentifiableSource> sourcesItr = sources.iterator();
+ IdentifiableSource source = sourcesItr.next();
+ Assert.assertEquals(source.getId(), 23710);
+ source = sourcesItr.next();
+ Assert.assertEquals(source.getId(), 23711);
+
+ // TO DO : Added tests for Annotations , Markers
+ }
+
+
+
+ @Test
+ public void readPolytomousKeyDataFromNodes() {
+ PolytomousKey pKey = CdmBase.deproxy(polytomousKeyService.find(polytomousKeyUuid),PolytomousKey.class);
+ PolytomousKeyNode rootNode = pKey.getRoot();
+
+
+ Assert.assertEquals(rootNode.getId(), 2750);
+
+ Assert.assertEquals(rootNode.getChildAt(0).getId(), 2751);
+ Assert.assertEquals(rootNode.getChildAt(0).getParent().getId(), rootNode.getId());
+ Assert.assertEquals(rootNode.getKey().getId(), pKey.getId());
+ Integer sortIndex = (Integer)getFieldValueViaReflection(rootNode.getChildAt(0), "sortIndex");
+ Assert.assertEquals(sortIndex, new Integer(0));
+ String statement = "Capitula without ligulate ray-florets; leaves entire or subentire";
+ Assert.assertEquals(rootNode.getChildAt(0).getStatement().getLabelText(Language.ENGLISH()), statement);
+
+ Assert.assertEquals(rootNode.getChildAt(1).getId(), 2753);
+ Assert.assertEquals(rootNode.getChildAt(1).getParent().getId(), rootNode.getId());
+ Assert.assertEquals(rootNode.getChildAt(1).getKey().getId(), pKey.getId());
+ sortIndex = (Integer)getFieldValueViaReflection(rootNode.getChildAt(1), "sortIndex");
+ Assert.assertEquals(sortIndex, new Integer(1));
+ statement = "Capitula with ligulate ray-florets; leaves pinnatisect";
+ Assert.assertEquals(rootNode.getChildAt(1).getStatement().getLabelText(Language.ENGLISH()), statement);
+
+ Assert.assertEquals(rootNode.getChildAt(1).getChildAt(0).getId(), 2754);
+ Assert.assertEquals(rootNode.getChildAt(1).getChildAt(0).getParent().getId(), rootNode.getChildAt(1).getId());
+ Assert.assertEquals(rootNode.getChildAt(1).getChildAt(0).getKey().getId(), pKey.getId());
+ sortIndex = (Integer)getFieldValueViaReflection(rootNode.getChildAt(1).getChildAt(0), "sortIndex");
+ Assert.assertEquals(sortIndex, new Integer(0));
+ statement = "Ray-florets yellow";
+ Assert.assertEquals(rootNode.getChildAt(1).getChildAt(0).getStatement().getLabelText(Language.ENGLISH()), statement);
+ Assert.assertEquals(rootNode.getChildAt(1).getChildAt(0).getChildAt(0).getTaxon().getTitleCache(), "Achillea arabica Kotschy sec. Cyprus");
+ }
+
+ @Test
+ public void addGreatGrandChildPolytomousKeyNode() {
+
+ PolytomousKey pKey = CdmBase.deproxy(polytomousKeyService.find(polytomousKeyUuid),PolytomousKey.class);
+ PolytomousKeyNode rootChildNode = pKey.getRoot().getChildAt(0);
+ PolytomousKeyNode grandChildNode = PolytomousKeyNode.NewInstance();
+ rootChildNode.addChild(grandChildNode);
+
+ grandChildNode = polytomousKeyNodeService.merge(grandChildNode);
+
+ PolytomousKeyNode greatGrandChildNode = PolytomousKeyNode.NewInstance();
+ grandChildNode.addChild(greatGrandChildNode);
+
+ Assert.assertFalse(pKey.getRoot().getChildAt(0).getChildAt(0).getId() == 0);
+ }
+
+ @Test
+ public void savePolytomousKeyNodeData() {
+ PolytomousKey pkey = CdmBase.deproxy(polytomousKeyService.find(polytomousKeyUuid),PolytomousKey.class);
+
+ PolytomousKeyNode pkeynode = pkey.getRoot();
+ String newQuestion = "New Question";
+ String newStatement = "New Statement";
+
+ Assert.assertEquals("Question 1",pkeynode.getQuestion().getLabel().get(Language.ENGLISH()).getText());
+ for(PolytomousKeyNode node : pkeynode.getChildren()) {
+
+ node.setQuestion(null);
+ node.setStatement(null);
+ }
+ //FIXME:Remoting Add tests for feature after fixing problem
+
+ //Feature feature = pkeynode.getFeature();
+ //Assert.assertEquals(feature.getTitleCache(),"Systematics");
+ //pkeynode.setFeature(null);
+
+ Assert.assertEquals(pkeynode.getChildAt(0).getModifyingText().get(Language.ENGLISH()).getText(),"Modifying Text 1a");
+ String modifyingText = "Modifying Text 1a updated";
+
+ //pkeynode.getChildAt(0).putModifyingText(Language.ENGLISH(), modifyingText);
+
+ Assert.assertEquals(pkeynode.getChildAt(0).getSubkey().getId(),751);
+ Assert.assertEquals("Asphodeline", pkeynode.getChildAt(0).getSubkey().getTitleCache());
+ Assert.assertNull(pkeynode.getChildAt(1).getTaxon());
+ Taxon taxon = CdmBase.deproxy(taxonService.find(taxon1Uuid),Taxon.class);
+ pkeynode.getChildAt(1).setTaxon(taxon);
+
+ polytomousKeyService.merge(pkey);
+
+ pkey = CdmBase.deproxy(polytomousKeyService.find(polytomousKeyUuid),PolytomousKey.class);
+
+
+ pkeynode = pkey.getRoot();
+ for(PolytomousKeyNode node : pkeynode.getChildren()) {
+ Assert.assertNull(node.getQuestion());
+ node.setQuestion(KeyStatement.NewInstance(Language.ENGLISH(),newQuestion));
+ Assert.assertNull(node.getStatement());
+ node.setStatement(KeyStatement.NewInstance(Language.ENGLISH(),newStatement));
+ }
+
+ Assert.assertEquals(pkeynode.getChildAt(1).getTaxon(), taxon);
+
+ polytomousKeyService.merge(pkey);
+
+ pkey = CdmBase.deproxy(polytomousKeyService.find(polytomousKeyUuid),PolytomousKey.class);
+
+ pkeynode = pkey.getRoot();
+ for(PolytomousKeyNode node : pkeynode.getChildren()) {
+ Assert.assertNotNull(node.getQuestion());
+ Map<Language, LanguageString> label = node.getQuestion().getLabel();
+ Assert.assertEquals(newQuestion, label.get(Language.ENGLISH()).getText());
+ Assert.assertNotNull(node.getStatement());
+ Assert.assertEquals(newStatement, node.getStatement().getLabel(Language.ENGLISH()).getText());
+ }
+ //Assert.assertEquals(pkeynode.getFeature().getId(), feature.getId());
+
+ }
+
+
+ @Test
+ public void savePolytomousKeyNodeDataWithSameSubKey() {
+
+ PolytomousKey pkey = CdmBase.deproxy(polytomousKeyService.find(polytomousKeyUuid),PolytomousKey.class);
+
+
+ PolytomousKeyNode pkeynode = pkey.getRoot();
+
+ PolytomousKey subkey1 = CdmBase.deproxy(pkeynode.getChildAt(0).getSubkey(), PolytomousKey.class);
+ String subkey1title = subkey1.getTitleCache();
+ subkey1.setTitleCache(subkey1title + "test", true);
+
+
+ PolytomousKey subkey2 = CdmBase.deproxy(pkeynode.getChildAt(1).getChildAt(0).getSubkey(), PolytomousKey.class);
+ String subkey2title = subkey2.getTitleCache();
+ subkey2.setTitleCache(subkey2title + "test", true);
+
+ Assert.assertSame(subkey1, subkey2);
+
+ polytomousKeyService.merge(pkey);
+ }
+
+ @Test
+ public void savePolytomousKeyNodeDataWithSameSubKeyUsingService() {
+
+ PolytomousKey pkey = CdmBase.deproxy(polytomousKeyService.find(polytomousKeyUuid),PolytomousKey.class);
+
+
+ PolytomousKeyNode pkeynode = pkey.getRoot();
+
+ PersistentCollection children = (PersistentCollection) pkeynode.getChildren();
+ PolytomousKeyNode childNode0 = (PolytomousKeyNode)commonService.get(pkeynode.getUuid(), "children", 0);
+ PolytomousKey subkey1 = CdmBase.deproxy(childNode0.getSubkey(),PolytomousKey.class);
+ String subkey1title = subkey1.getTitleCache();
+ subkey1.setTitleCache(subkey1title + "test", true);
+
+ PolytomousKeyNode childNode1 = (PolytomousKeyNode)commonService.get(pkeynode.getUuid(), "children", 1);
+ PolytomousKey subkey2 = CdmBase.deproxy(childNode1.getSubkey(),PolytomousKey.class);
+ String subkey2title = subkey2.getTitleCache();
+ subkey2.setTitleCache(subkey2title + "test", true);
+
+ Assert.assertNotSame(childNode0, childNode1);
+
+ Assert.assertSame(subkey1, subkey2);
+
+ polytomousKeyService.merge(pkey);
+ }
+
+
+
+ @Test
+ public void savePolytomousKeyNodeDataWithSameLanguageInLabel() {
+
+ PolytomousKey pkey = CdmBase.deproxy(polytomousKeyService.find(polytomousKeyUuid),PolytomousKey.class);
+ PolytomousKeyNode pkeynode = pkey.getRoot();
+
+ Map<Language, LanguageString> label1 = pkeynode.getQuestion().getLabel();
+ label1.size();
+
+
+ Map<Language, LanguageString> label2 = pkeynode.getChildAt(0).getStatement().getLabel();
+ label2.size();
+
+
+ polytomousKeyService.merge(pkey);
+ }
+
+ @Test
+ public void deleteSubKeyInPolytomousSubKeyWithoutInitializing() {
+ PolytomousKey pKey = CdmBase.deproxy(polytomousKeyService.find(polytomousKeyUuid),PolytomousKey.class);
+
+
+ PolytomousKeyNode rootNode = pKey.getRoot();
+ PolytomousKeyNode child = rootNode.getChildAt(0);
+ PolytomousKey subKey = child.getSubkey();
+
+ polytomousKeyService.delete(subKey.getUuid());
+
+ // retrieving subkey shows its null
+ subKey = CdmBase.deproxy(polytomousKeyService.find(subKeyUuid),PolytomousKey.class);
+ Assert.assertNull(subKey);
+
+ pKey = CdmBase.deproxy(polytomousKeyService.find(polytomousKeyUuid),PolytomousKey.class);
+
+
+ rootNode = pKey.getRoot();
+ child = rootNode.getChildAt(0);
+ subKey = child.getSubkey();
+ // subkey will not be null, because the delete functionality of the subkey
+ // does not currently delete it from a polytomous key node
+
+ // FIXME: With the new delete functionality this should be null, shouldn't it ?
+ Assert.assertNotNull(subKey);
+ }
+
+
+ @Test
+ public void deleteSubKeyInPolytomousNode() {
+ PolytomousKey pKey = CdmBase.deproxy(polytomousKeyService.find(polytomousKeyUuid),PolytomousKey.class);
+
+
+ PolytomousKeyNode rootNode = pKey.getRoot();
+ List<PolytomousKeyNode> children = rootNode.getChildren();
+ PolytomousKeyNode child = rootNode.getChildAt(0);
+ polytomousKeyNodeService.delete(child.getUuid(), true);
+
+ pKey = CdmBase.deproxy(polytomousKeyService.find(polytomousKeyUuid),PolytomousKey.class);
+
+ rootNode = pKey.getRoot();
+ children = rootNode.getChildren();
+ Assert.assertFalse(children.contains(child));
+ }
+
+ @Test
+ public void deleteSubKeyInPolytomousSubKeyAfterInitializing() {
+ PolytomousKey pKey = CdmBase.deproxy(polytomousKeyService.find(polytomousKeyUuid),PolytomousKey.class);
+
+
+ PolytomousKeyNode rootNode = pKey.getRoot();
+ PolytomousKeyNode child = rootNode.getChildAt(0);
+ PolytomousKey subKey = child.getSubkey();
+ // this call initializes the subkey
+ subKey.getRoot();
+
+ polytomousKeyService.delete(subKey);
+
+ // since subKey was initialized before the delete, it will be
+ // accesible even after the delete. This behaviour is similar
+ // to hibernate session delete where the deleted object is
+ // made transient, but not deleted from the object graph
+
+ PolytomousKeyNode subKeyRootNode = subKey.getRoot();
+ Assert.assertNotNull(subKey);
+ }
+
+ @Test
+ public void saveNewTermVocabulary() {
+ TermVocabulary termVocabulary =
+ TermVocabulary.NewInstance(TermType.Feature,
+ null,
+ "Untitled",
+ null,
+ null);
+ try {
+ List<TermVocabulary<DefinedTermBase>> vocabularies = vocabularyService.findByTermType(TermType.Feature);
+
+ for(TermVocabulary vocab : vocabularies) {
+ vocab.getTermsOrderedByLabels(Language.ENGLISH());
+ }
+
+ termVocabulary = vocabularyService.merge(termVocabulary);
+ vocabularies.add(termVocabulary);
+ termVocabulary.setLabel("Test");
+ vocabularyService.merge(new ArrayList<TermVocabulary>(vocabularies));
+ } finally {
+ vocabularyService.delete(termVocabulary);
+ }
+ }
+
+ @Ignore // should be enabled once resolution of #5066 is merged into cdmlib main branch
+ @Test
+ public void saveNewTerm() {
+ UUID vocNameFeatureUuid = UUID.fromString("fa7ca3eef-4092-49e1-beec-ed5096193e5e");
+ UUID vocFeatureUuid = UUID.fromString("b187d555-f06f-4d65-9e53-da7c93f8eaa8");
+ DefinedTermBase newTerm = TermType.Feature.getEmptyDefinedTermBase();
+ newTerm.setLabel("CreateTest");
+
+ try {
+
+ Assert.assertNotNull(newTerm);
+ TermVocabulary vocNameFeature = vocabularyService.find(vocNameFeatureUuid);
+ TermVocabulary vocFeature = vocabularyService.find(vocFeatureUuid);
+
+ List<TermVocabulary> vocs = new ArrayList<TermVocabulary>();
+
+ vocs.add(vocNameFeature);
+ vocs.add(vocFeature);
+
+ vocNameFeature.addTerm(newTerm);
+
+ vocs = vocabularyService.merge(vocs);
+ for(TermVocabulary voc : vocs) {
+ if(voc.getUuid().equals(vocNameFeatureUuid)) {
+ vocNameFeature = voc;
+ }
+ }
+
+ Assert.assertTrue(vocNameFeature.getTerms().contains(newTerm));
+
+ for(Object obj : vocNameFeature.getTerms()) {
+ DefinedTermBase dtb = (DefinedTermBase)obj;
+ if("CreateTest".equals(dtb.getLabel())) {
+ newTerm = dtb;
+ Assert.assertNotNull(dtb.getCreatedBy());
+ Assert.assertNotNull(dtb.getCreated());
+ } else {
+ Assert.assertNull(dtb.getCreatedBy());
+ }
+ }
+ newTerm.setLabel("UpdateTest");
+ newTerm = termService.merge(newTerm);
+ Assert.assertNotNull(newTerm.getUpdatedBy());
+ Assert.assertNotNull(newTerm.getUpdated());
+
+ Assert.assertNull(vocNameFeature.getCreatedBy());
+ Assert.assertNull(vocFeature.getCreatedBy());
+ } finally {
+ if(termService.find(newTerm.getUuid()) != null) {
+ termService.delete(newTerm.getUuid());
+ }
+ }
+ }
+
+ @Ignore // activate after fixing #5138
+ @Test
+ public void updatePerson() {
+ Person person = (Person) CdmApplicationState.getCurrentAppConfig().getAgentService().load(personUuid);
+ // Note : at this point the contact field in Person (AgentBase) is initialized even though no
+ // data related to the Contact class exists in the database.
+ person.setFirstname("Me");
+ CdmApplicationState.getCurrentAppConfig().getAgentService().merge(person);
+
+ }
+
+ @Ignore // activate after fixing #5138
+ @Test
+ public void createPerson() {
+
+ Person person = Person.NewInstance();
+ //person.setTitleCache("New Person", true);
+ person = (Person) CdmApplicationState.getCurrentAppConfig().getAgentService().merge(person);
+ //Note : at this point the contact field in Person (AgentBase) is set to null which is
+ // different behaviour as compared to a load call on an existing Person entity.
+ // The fact that the contact is null will lead to the all-delete-orphan error.
+ person = (Person) CdmApplicationState.getCurrentAppConfig().getAgentService().load(person.getUuid());
+ person.setFirstname("Some");
+ CdmApplicationState.getCurrentAppConfig().getAgentService().merge(person);
+ }
+}
--- /dev/null
+package eu.etaxonomy.taxeditor.session;
+
+import java.util.List;
+import java.util.UUID;
+
+import org.apache.log4j.Logger;
+import org.junit.Assert;
+import org.junit.BeforeClass;
+import org.junit.Test;
+import org.unitils.dbunit.annotation.DataSet;
+
+import eu.etaxonomy.cdm.api.service.IPolytomousKeyService;
+import eu.etaxonomy.cdm.model.common.CdmBase;
+import eu.etaxonomy.cdm.model.common.Language;
+import eu.etaxonomy.cdm.model.description.PolytomousKey;
+import eu.etaxonomy.taxeditor.httpinvoker.RemotingSessionAwareTest;
+
+//FIXME:Remoting fix data issue : User#30
+//@Ignore
+@DataSet
+public class CdmEntitySessionManagerTest extends RemotingSessionAwareTest {
+
+ private static final Logger logger = Logger.getLogger(CdmEntitySessionManagerTest.class);
+
+
+ IPolytomousKeyService polytomousKeyService = getRemoteApplicationController().getPolytomousKeyService();
+
+ private final UUID polytomousKeyUuid = UUID.fromString("0d53ba20-7de4-4baa-bd8a-401048447d66");
+ private final Language english = Language.getLanguageFromUuid(Language.uuidEnglish);
+
+
+ @BeforeClass
+ public static void initializeCdmEntitySessionManagerTest() {
+ }
+
+
+ @Test
+ public void manageNullSessionTest() {
+
+ PolytomousKey pKey = CdmBase.deproxy(polytomousKeyService.find(polytomousKeyUuid),PolytomousKey.class);
+ cdmEntitySessionManager.bind(null);
+ Assert.assertSame(pKey, pKey);
+ Assert.assertNull(getActiveSession());
+ }
+
+ @Test
+ public void manageSessionWithObjectTest() {
+ PolytomousKey pKey = CdmBase.deproxy(polytomousKeyService.find(polytomousKeyUuid),PolytomousKey.class);
+
+ Assert.assertNotNull(getActiveSession());
+
+
+ // FIXME:Remoting fix test of setting root entities
+ //Assert.assertEquals(rootEntities.size(),1);
+ //Assert.assertSame(rootEntities.get(0), pKey);
+
+ String upTitleCache = "Updated Title Cache";
+ String upStatement = "Updated Statement";
+ pKey.setTitleCache(upTitleCache, true);
+
+ pKey.getRoot().getChildAt(0).getStatement().getLabel(english).setText(upStatement);
+ polytomousKeyService.merge(pKey);
+
+ pKey = CdmBase.deproxy(polytomousKeyService.find(polytomousKeyUuid),PolytomousKey.class);
+
+
+ Assert.assertEquals(pKey.getTitleCache(), upTitleCache);
+ Assert.assertEquals(pKey.getRoot().getChildAt(0).getStatement().getLabel(english).getText(), upStatement);
+ }
+
+ @Test
+ public void manageSessionWithListTest() {
+ List<PolytomousKey> pKeys = polytomousKeyService.list(PolytomousKey.class, null, null, null, null);
+ Assert.assertNotNull(getActiveSession());
+
+
+ // FIXME:Remoting fix test of setting root entities
+ //Assert.assertEquals(rootEntities.size(),2);
+ //Assert.assertSame(rootEntities.get(0),pKeys.get(0));
+ //Assert.assertEquals(rootEntities.get(0).getUuid(),UUID.fromString("9d8bf4f6-a70a-4b80-8556-2ccfb436ff01"));
+ //Assert.assertSame(rootEntities.get(1),pKeys.get(1));
+ //Assert.assertEquals(rootEntities.get(1).getUuid(),UUID.fromString("0d53ba20-7de4-4baa-bd8a-401048447d66"));
+
+ String upTitleCache = "Updated Title Cache";
+ String upStatement = "Updated Statement";
+ pKeys.get(0).setTitleCache(upTitleCache, true);
+ polytomousKeyService.merge(pKeys.get(0));
+ pKeys.get(1).getRoot().getChildAt(0).getStatement().getLabel(english).setText(upStatement);
+ polytomousKeyService.merge(pKeys.get(1));
+
+
+ pKeys = polytomousKeyService.list(PolytomousKey.class, null, null, null, null);
+
+ Assert.assertEquals(pKeys.get(0).getTitleCache(), upTitleCache);
+ Assert.assertEquals(pKeys.get(1).getRoot().getChildAt(0).getStatement().getLabel(english).getText(), upStatement);
+
+ }
+
+}
--- /dev/null
+package eu.etaxonomy.taxeditor.session;
+
+import java.util.HashSet;
+import java.util.List;
+import java.util.Map;
+import java.util.Set;
+
+import org.apache.log4j.Logger;
+import org.junit.Assert;
+
+import eu.etaxonomy.cdm.api.application.CdmChangeEvent;
+import eu.etaxonomy.cdm.api.application.ICdmChangeListener;
+import eu.etaxonomy.cdm.model.common.CdmBase;
+
+public class MockSessionOwner<T extends CdmBase> implements ICdmEntitySessionEnabled, ICdmChangeListener {
+
+ private static final Logger logger = Logger.getLogger(MockSessionOwner.class);
+
+ private final List<T> rootEntities;
+ private Set<T> expectedUpdatedObjects;
+ private Set<? extends CdmBase> eventUpdatedObjects;
+
+ private ICdmEntitySession session;
+
+ public MockSessionOwner() {
+ this.rootEntities = null;
+ this.expectedUpdatedObjects = new HashSet<T>();
+ }
+
+// public MockSessionOwner(Set<T> updatedObjects) {
+// this.rootEntities = null;
+// this.updatedObjects = updatedObjects;
+// }
+//
+// public MockSessionOwner(List<T> rootEntities) {
+// this.rootEntities = rootEntities;
+// }
+
+ public void setExpectedUpdatedObjects(Set<T> updatedObjects) {
+ this.expectedUpdatedObjects = updatedObjects;
+ }
+
+ public void addExpectedUpdatedObject(T updatedObject) {
+ this.expectedUpdatedObjects.add(updatedObject);
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled#getCdmEntitySession()
+ */
+ @Override
+ public ICdmEntitySession getCdmEntitySession() {
+ return session;
+ }
+
+ public void setCdmEntitySession(ICdmEntitySession session) {
+ this.session = session;;
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled#getRootEntities()
+ */
+ @Override
+ public List<T> getRootEntities() {
+ return rootEntities;
+ }
+
+ public void dispose() {
+ if(session != null) {
+ session.dispose();
+ logger.info("disposed of session from session owner : " + this);
+ }
+ }
+
+ public Set<? extends CdmBase> getEventUpdatedObjects() {
+ return eventUpdatedObjects;
+ }
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.cdm.api.application.ICdmChangeListener#onChange(eu.etaxonomy.cdm.api.application.CdmChangeEvent)
+ */
+ @Override
+ public void onChange(CdmChangeEvent event) {
+ eventUpdatedObjects = event.getChangedObjects();
+ if(expectedUpdatedObjects != null && !expectedUpdatedObjects.isEmpty()) {
+ for(CdmBase cb : expectedUpdatedObjects) {
+ Assert.assertTrue(event.getChangedObjects().contains(cb));
+ }
+ }
+
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.session.ICdmEntitySessionEnabled#getPropertyPathsMap()
+ */
+ @Override
+ public Map<Object, List<String>> getPropertyPathsMap() {
+ // TODO Auto-generated method stub
+ return null;
+ }
+
+}
--- /dev/null
+// $Id$
+/**
+* Copyright (C) 2015 EDIT
+* European Distributed Institute of Taxonomy
+* http://www.e-taxonomy.eu
+*
+* The contents of this file are subject to the Mozilla Public License Version 1.1
+* See LICENSE.TXT at the top of this package for the full license terms.
+*/
+package eu.etaxonomy.taxeditor.test;
+
+import eu.etaxonomy.cdm.api.conversation.ConversationHolder;
+import eu.etaxonomy.cdm.api.conversation.ConversationHolderMock;
+import eu.etaxonomy.cdm.api.conversation.IConversationEnabled;
+import eu.etaxonomy.cdm.persistence.hibernate.CdmDataChangeMap;
+
+/**
+ * @author cmathew
+ * @date 15 Jun 2015
+ *
+ */
+public class MockConversationEnabled implements IConversationEnabled {
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.cdm.persistence.hibernate.ICdmPostDataChangeObserver#update(eu.etaxonomy.cdm.persistence.hibernate.CdmDataChangeMap)
+ */
+ @Override
+ public void update(CdmDataChangeMap arg0) {
+ // TODO Auto-generated method stub
+
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.cdm.api.conversation.IConversationEnabled#getConversationHolder()
+ */
+ @Override
+ public ConversationHolder getConversationHolder() {
+ return new ConversationHolderMock();
+ }
+
+}
--- /dev/null
+// $Id$
+/**
+ * Copyright (C) 2015 EDIT
+ * European Distributed Institute of Taxonomy
+ * http://www.e-taxonomy.eu
+ *
+ * The contents of this file are subject to the Mozilla Public License Version 1.1
+ * See LICENSE.TXT at the top of this package for the full license terms.
+ */
+package eu.etaxonomy.taxeditor.ui.dialogs;
+
+import java.util.List;
+
+import org.junit.Assert;
+import org.junit.Ignore;
+import org.junit.Test;
+import org.unitils.UnitilsJUnit4;
+
+import eu.etaxonomy.taxeditor.remoting.server.CDMServerException;
+import eu.etaxonomy.taxeditor.remoting.source.CdmServerInfo;
+import eu.etaxonomy.taxeditor.remoting.source.CdmServerInfo.CdmInstanceInfo;
+
+/**
+ * @author cmathew
+ * @date 26 Jan 2015
+ *
+ */
+
+public class CdmServerInfoTest extends UnitilsJUnit4 {
+
+ @Test
+ public void pingServersTest() {
+ List<CdmServerInfo> servers = CdmServerInfo.getCdmServers();
+ for(CdmServerInfo server : servers) {
+ server.pingServer();
+ }
+ }
+
+
+ @Ignore // this should be targetting integration or production
+ @Test
+ public void pingInstancesTest() {
+ CdmServerInfo csii = new CdmServerInfo("edit-test", "test.e-taxonomy.eu", 8080);
+ try {
+ csii.refreshInstances();
+ List<CdmInstanceInfo> instances = csii.getInstances();
+ for(CdmInstanceInfo instance : instances) {
+ Assert.assertTrue(csii.pingInstance(instance, 8080));
+ }
+ } catch (CDMServerException e) {
+ Assert.fail("Execption should not be thrown here");
+ }
+ }
+
+ @Test
+ public void refreshWrongInstancesTest() {
+ CdmServerInfo wrongCsii = new CdmServerInfo("local", "local", 8080);
+ try {
+ wrongCsii.refreshInstances();
+ List<CdmInstanceInfo> instances = wrongCsii.getInstances();
+ Assert.fail("Execption should be thrown here");
+ } catch (CDMServerException e) {
+
+ }
+ }
+
+ @Ignore // this should be targetting integration or production
+ @Test
+ public void refreshInstancesTest() throws CDMServerException {
+ CdmServerInfo cdmServerInfo = new CdmServerInfo("edit-test", "test.e-taxonomy.eu", 8080);
+ cdmServerInfo.refreshInstances();
+ List<CdmInstanceInfo> instances = cdmServerInfo.getInstances();
+ Assert.assertTrue(instances != null && !instances.isEmpty());
+ }
+
+ @Test
+ public void convertToServerConfigTest() {
+
+
+ }
+}
package eu.etaxonomy.taxeditor.ui.dialogs;\r
\r
import org.eclipse.swtbot.eclipse.finder.waits.Conditions;\r
+import org.junit.Ignore;\r
import org.junit.Test;\r
\r
import eu.etaxonomy.taxeditor.test.AbstractEditorTest;\r
\r
-\r
+@Ignore\r
public class LoginDialogTest extends AbstractEditorTest{\r
- \r
+\r
@Test\r
public void canLoginAsAdmin() throws Exception {\r
bot.menu("General").menu("Login").click();\r
bot.textWithLabel("Password").setText("00000");\r
utils.ok();\r
}\r
- \r
+\r
@Test\r
public void canCancelLogin() throws Exception {\r
bot.menu("General").menu("Login").click();\r
bot.waitUntil(Conditions.shellIsActive("Login"));\r
utils.cancel();\r
}\r
- \r
+\r
}\r
/**\r
- * \r
+ *\r
*/\r
package eu.etaxonomy.taxeditor.ui.selection;\r
\r
import org.eclipse.swtbot.eclipse.finder.waits.Conditions;\r
+import org.junit.Ignore;\r
import org.junit.Test;\r
\r
/**\r
- * This test will only test the selection element itself. The test may have to start other \r
- * dialogs open windows before to get at the selection element. Any errors on the way \r
+ * This test will only test the selection element itself. The test may have to start other\r
+ * dialogs open windows before to get at the selection element. Any errors on the way\r
* should be handled by different tests.\r
- * \r
+ *\r
* @author n.hoffmann\r
*\r
*/\r
+@Ignore\r
public class ClassificationSelectionElementTest extends AbstractSelectionElementTest{\r
@Override\r
public void setup() {\r
bot.menu("General").menu("New").menu("Taxon").click();\r
bot.waitUntil(Conditions.shellIsActive("New Entity"));\r
}\r
- \r
+\r
@Test\r
public void canSelectClassification() {\r
utils.openFilteredSelection(0, "Choose a Classification");\r
/**\r
- * \r
+ *\r
*/\r
package eu.etaxonomy.taxeditor.ui.selection;\r
\r
import org.eclipse.swtbot.eclipse.finder.waits.Conditions;\r
+import org.junit.Ignore;\r
import org.junit.Test;\r
\r
/**\r
* @author n.hoffmann\r
*\r
*/\r
+@Ignore\r
public class NameSelectionElementTest extends AbstractSelectionElementTest {\r
@Override\r
public void setup() {\r
bot.menu("General").menu("New").menu("Taxon").click();\r
bot.waitUntil(Conditions.shellIsActive("New Entity"));\r
}\r
- \r
+\r
@Test\r
public void canSelectName() {\r
utils.openFilteredSelection(3, "Choose a name");\r
/**\r
- * \r
+ *\r
*/\r
package eu.etaxonomy.taxeditor.ui.selection;\r
\r
import org.eclipse.swtbot.eclipse.finder.waits.Conditions;\r
+import org.junit.Ignore;\r
import org.junit.Test;\r
\r
/**\r
* @author n.hoffmann\r
*\r
*/\r
+@Ignore\r
public class TaxonNodeSelectionElementTest extends AbstractSelectionElementTest {\r
@Override\r
public void setup() {\r
bot.menu("General").menu("New").menu("Taxon").click();\r
bot.waitUntil(Conditions.shellIsActive("New Entity"));\r
}\r
- \r
+\r
@Test\r
public void canSelectTaxon() {\r
utils.openFilteredSelection(1, "Select parent taxon");\r
utils.cancel();\r
}\r
- \r
+\r
}\r
/**\r
- * \r
+ *\r
*/\r
package eu.etaxonomy.taxeditor.ui.selection;\r
\r
import org.eclipse.swtbot.eclipse.finder.waits.Conditions;\r
+import org.junit.Ignore;\r
import org.junit.Test;\r
\r
/**\r
- * This test will only test the selection element itself. The test may have to start other \r
- * dialogs open windows before to get at the selection element. Any errors on the way \r
+ * This test will only test the selection element itself. The test may have to start other\r
+ * dialogs open windows before to get at the selection element. Any errors on the way\r
* should be handled by different tests.\r
- * \r
+ *\r
* @author n.hoffmann\r
*\r
*/\r
+@Ignore\r
public class TaxonSelectionElementTest extends AbstractSelectionElementTest {\r
@Override\r
public void setup() {\r
bot.menu("General").menu("New").menu("Taxon").click();\r
bot.waitUntil(Conditions.shellIsActive("New Entity"));\r
}\r
- \r
+\r
@Test\r
public void canSelectTaxon() {\r
utils.openFilteredSelection(2, "Choose a taxon");\r
--- /dev/null
+package eu.etaxonomy.taxeditor.util;
+
+/**
+ * based on from http://code.google.com/p/java-tester/source/browse/trunk/src/main/java/org/jtester/unitils/database/H2DbSupport.java
+ */
+
+
+import java.util.Set;
+
+import org.unitils.core.dbsupport.DbSupport;
+
+public class H2DbSupport extends DbSupport {
+ /**
+ * Creates support for HsqlDb databases.
+ */
+ public H2DbSupport() {
+ super("h2");
+ }
+
+ @Override
+ public Set<String> getColumnNames(String tableName) {
+ return getSQLHandler().getItemsAsStringSet(
+ "select COLUMN_NAME from INFORMATION_SCHEMA.COLUMNS where TABLE_NAME = '" + tableName
+ + "' AND TABLE_SCHEMA = '" + getSchemaName() + "'");
+ }
+
+ @Override
+ public Set<String> getTableNames() {
+ return getSQLHandler().getItemsAsStringSet(
+ "select TABLE_NAME from INFORMATION_SCHEMA.TABLES where TABLE_TYPE = 'TABLE' AND TABLE_SCHEMA = '"
+ + getSchemaName() + "'");
+ }
+
+ @Override
+ public Set<String> getViewNames() {
+ return getSQLHandler().getItemsAsStringSet(
+ "select TABLE_NAME from INFORMATION_SCHEMA.TABLES where TABLE_TYPE = 'VIEW' AND TABLE_SCHEMA = '"
+ + getSchemaName() + "'");
+ }
+
+ @Override
+ public Set<String> getSequenceNames() {
+ return getSQLHandler().getItemsAsStringSet(
+ "select SEQUENCE_NAME from INFORMATION_SCHEMA.SEQUENCES where SEQUENCE_SCHEMA = '"
+ + getSchemaName() + "'");
+ }
+
+ @Override
+ public Set<String> getTriggerNames() {
+ return getSQLHandler().getItemsAsStringSet(
+ "select TRIGGER_NAME from INFORMATION_SCHEMA.TRIGGERS where TRIGGER_SCHEMA = '" + getSchemaName()
+ + "'");
+ }
+
+ @Override
+ public long getSequenceValue(String sequenceName) {
+ return getSQLHandler().getItemAsLong(
+ "select CURRENT_VALUE from INFORMATION_SCHEMA.SEQUENCES where SEQUENCE_SCHEMA = '"
+ + getSchemaName() + "' and SEQUENCE_NAME = '" + sequenceName + "'");
+ }
+
+ @Override
+ public boolean supportsSequences() {
+ return true;
+ }
+
+ @Override
+ public boolean supportsTriggers() {
+ return true;
+ }
+
+ @Override
+ public boolean supportsIdentityColumns() {
+ return true;
+ }
+
+ @Override
+ public void incrementSequenceToValue(String sequenceName, long newSequenceValue) {
+ getSQLHandler().executeUpdate(
+ "alter sequence " + qualified(sequenceName) + " restart with " + newSequenceValue);
+ }
+
+ @Override
+ public void incrementIdentityColumnToValue(String tableName, String identityColumnName, long identityValue) {
+ getSQLHandler().executeUpdate(
+ "alter table " + qualified(tableName) + " alter column " + quoted(identityColumnName)
+ + " RESTART WITH " + identityValue);
+ }
+
+ @Override
+ public void disableReferentialConstraints() {
+ Set<String> tableNames = getTableNames();
+ for (String tableName : tableNames) {
+ disableReferentialConstraints(tableName);
+ }
+ }
+
+ @Override
+ public void disableValueConstraints() {
+ Set<String> tableNames = getTableNames();
+ for (String tableName : tableNames) {
+ disableValueConstraints(tableName);
+ }
+ }
+
+ private void disableReferentialConstraints(String tableName) {
+ Set<String> constraintNames = this.getForeignKeyConstraintNames(tableName);
+ for (String constraintName : constraintNames) {
+ this.removeForeignKeyConstraint(tableName, constraintName);
+ }
+ }
+
+ private void disableValueConstraints(String tableName) {
+ Set<String> primaryKeyColumnNames = this.getPrimaryKeyColumnNames(tableName);
+
+ Set<String> notNullColumnNames = this.getNotNullColummnNames(tableName);
+ for (String notNullColumnName : notNullColumnNames) {
+ if (primaryKeyColumnNames.contains(notNullColumnName)) {
+ continue;
+ }
+ this.removeNotNullConstraint(tableName, notNullColumnName);
+ }
+ }
+
+ /**
+ * Gets the names of all identity columns of the given table.
+ * <p/>
+ * todo check, at this moment the PK columns are returned
+ *
+ * @param tableName The table, not null
+ * @return The names of the identity columns of the table with the given name
+ */
+ @Override
+ public Set<String> getIdentityColumnNames(String tableName) {
+ return getPrimaryKeyColumnNames(tableName);
+ }
+
+ private Set<String> getPrimaryKeyColumnNames(String tableName) {
+ return getSQLHandler().getItemsAsStringSet(
+ "select COLUMN_NAME from INFORMATION_SCHEMA.INDEXES where PRIMARY_KEY=TRUE AND TABLE_NAME = '"
+ + tableName + "' AND TABLE_SCHEMA = '" + getSchemaName() + "'");
+ }
+
+ private Set<String> getNotNullColummnNames(String tableName) {
+ return getSQLHandler().getItemsAsStringSet(
+ "select COLUMN_NAME from INFORMATION_SCHEMA.COLUMNS where IS_NULLABLE = 'NO' AND TABLE_NAME = '"
+ + tableName + "' AND TABLE_SCHEMA = '" + getSchemaName() + "'");
+ }
+
+ private Set<String> getForeignKeyConstraintNames(String tableName) {
+ return getSQLHandler().getItemsAsStringSet(
+ "select CONSTRAINT_NAME from INFORMATION_SCHEMA.CONSTRAINTS "
+ + "where CONSTRAINT_TYPE = 'REFERENTIAL' AND TABLE_NAME = '" + tableName
+ + "' AND CONSTRAINT_SCHEMA = '" + getSchemaName() + "'");
+ }
+
+ private void removeForeignKeyConstraint(String tableName, String constraintName) {
+ getSQLHandler().executeUpdate(
+ "alter table " + qualified(tableName) + " drop constraint " + quoted(constraintName));
+ }
+
+ private void removeNotNullConstraint(String tableName, String columnName) {
+ getSQLHandler().executeUpdate(
+ "alter table " + qualified(tableName) + " alter column " + quoted(columnName) + " set null");
+ }
+}
--- /dev/null
+<?xml version="1.0" encoding="UTF-8"?>
+<beans xmlns="http://www.springframework.org/schema/beans" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xmlns:context="http://www.springframework.org/schema/context" xsi:schemaLocation="http://www.springframework.org/schema/beans http://www.springframework.org/schema/beans/spring-beans-3.1.xsd http://www.springframework.org/schema/context http://www.springframework.org/schema/context/spring-context-2.5.xsd">
+ <bean id="defaultRemoteSource">
+ <property name="server" value="127.0.0.1" />
+ <property name="port" value="9090" />
+ <property name="contextPath" value="" />
+ </bean>
+ <bean id="incompleteRemoteSource">
+ <property name="port" value="9090" />
+ <property name="contextPath" value="" />
+ </bean>
+</beans>
+
--- /dev/null
+<?xml version="1.0" encoding="UTF-8"?>
+<beans xmlns="http://www.springframework.org/schema/beans"
+ xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
+ xmlns:tx="http://www.springframework.org/schema/tx"
+ xmlns:context="http://www.springframework.org/schema/context"
+ xsi:schemaLocation="http://www.springframework.org/schema/beans http://www.springframework.org/schema/beans/spring-beans-3.1.xsd
+ http://www.springframework.org/schema/context http://www.springframework.org/schema/context/spring-context-2.5.xsd
+ http://www.springframework.org/schema/tx http://www.springframework.org/schema/tx/spring-tx-2.5.xsd
+ ">
+
+ <!--
+ DataSourceProperties allow configuring specific properties of the datasources
+
+ * cdmlib-remote.xslBasePath:
+ alternative base path for REST services to retrieve XSL style sheets from.
+ the base path must be on the same domain since cross domain xsl loading is
+ not permitted
+ -->
+ <bean id="dataSourceProperties" class="eu.etaxonomy.cdm.remote.config.DataSourceProperties">
+ <property name="propsMap">
+ <map>
+ <!--
+ <entry key="dataSourceBeanID">
+ <props>
+ <prop key="cdmlib-remote.xslBasePath">/xsl</prop>
+ </props>
+ </entry>
+ -->
+ </map>
+ </property>
+ </bean>
+
+ <bean id="cdmTest" lazy-init="true" class="com.mchange.v2.c3p0.ComboPooledDataSource">
+ <property name="driverClass" value="eu.etaxonomy.cdm.database.LocalH2"/>
+ <property name="user" value="sa" />
+ <property name="password" value="" />
+ <property name="jdbcUrl" value="jdbc:h2:file:./target/classes/h2/cdmTest;AUTO_SERVER=TRUE"/>
+ </bean>
+</beans>
\ No newline at end of file
--- /dev/null
+<?xml version="1.0" encoding="UTF-8"?><!--
+ generated by Jailer 4.3, Thu Oct 09 18:00:09 CEST 2014 from cmathew@cmbgbm-t530
+
+ Extraction Model: PolytomousKey where uuid like '0d53ba20-7de4-4baa-bd8a-401048447d66' (extractionmodel/by-example/SbE-PolytomousKey-17-59-56-907.csv)
+ Database URL: jdbc:mysql://127.0.0.1:3306/local-cyprus
+ Database User: root
+
+ Exported Rows: 79
+ AgentBase 1
+ Credit 1
+ Extension 1
+ KeyStatement 10
+ KeyStatement_LanguageString 10
+ LanguageString 19
+ OriginalSourceBase 2
+ PolytomousKey 2
+ PolytomousKeyNode 10
+ PolytomousKeyNode_LanguageString 9
+ PolytomousKey_Credit 1
+ PolytomousKey_Extension 1
+ PolytomousKey_OriginalSourceBase 2
+ PolytomousKey_RightsInfo 1
+ PolytomousKey_Taxon 1
+ RightsInfo 1
+ TaxonBase 6
+
+--><dataset>
+ <PolytomousKey_Extension PolytomousKey_id="1550" extensions_id="10"/>
+
+ <PolytomousKey_Credit PolytomousKey_id="1550" credits_id="20" sortIndex="0"/>
+
+ <PolytomousKeyNode_LanguageString PolytomousKeyNode_id="2751" modifyingtext_id="13780" modifyingtext_mapkey_id="124"/>
+ <PolytomousKeyNode_LanguageString PolytomousKeyNode_id="2752" modifyingtext_id="13781" modifyingtext_mapkey_id="124"/>
+ <PolytomousKeyNode_LanguageString PolytomousKeyNode_id="2753" modifyingtext_id="13795" modifyingtext_mapkey_id="124"/>
+ <PolytomousKeyNode_LanguageString PolytomousKeyNode_id="2754" modifyingtext_id="13788" modifyingtext_mapkey_id="124"/>
+ <PolytomousKeyNode_LanguageString PolytomousKeyNode_id="2755" modifyingtext_id="13785" modifyingtext_mapkey_id="124"/>
+ <PolytomousKeyNode_LanguageString PolytomousKeyNode_id="2756" modifyingtext_id="13787" modifyingtext_mapkey_id="124"/>
+ <PolytomousKeyNode_LanguageString PolytomousKeyNode_id="2757" modifyingtext_id="13794" modifyingtext_mapkey_id="124"/>
+ <PolytomousKeyNode_LanguageString PolytomousKeyNode_id="2758" modifyingtext_id="13791" modifyingtext_mapkey_id="124"/>
+ <PolytomousKeyNode_LanguageString PolytomousKeyNode_id="2759" modifyingtext_id="13793" modifyingtext_mapkey_id="124"/>
+
+ <LanguageString id="13780" created="2014-03-10 10:03:09.0" uuid="cceaa60b-61f4-4c8a-bb0e-d45f0fa3e2dc" text="Modifying Text 1a" language_id="124"/>
+ <LanguageString id="13781" created="2014-03-10 10:03:17.0" uuid="01a0ace4-de49-4725-9909-e881fb13035d" text="Modifying Text 1b" language_id="124"/>
+ <LanguageString id="13782" created="2014-03-10 10:03:48.0" uuid="ec0fea40-69dd-4c3e-ab7a-34948037a069" updated="2014-03-10 10:06:32.0" text="Capitula with ligulate ray-florets; leaves pinnatisect" createdby_id="30" updatedby_id="30" language_id="124"/>
+ <LanguageString id="13783" created="2014-03-10 10:04:03.0" uuid="82f8a3a0-567f-4d89-ba10-3f3699111d55" updated="2014-03-10 10:06:32.0" text="Ray-florets yellow" createdby_id="30" updatedby_id="30" language_id="124"/>
+ <LanguageString id="13784" created="2014-03-10 10:04:21.0" uuid="4270501f-1efc-45c2-9e8f-c65f120e8f4c" updated="2014-03-10 10:06:32.0" text="Stem thinly pilose; leaves 10-15 mm wide, with spreading linear-subulate segments; perennial herb" createdby_id="30" updatedby_id="30" language_id="124"/>
+ <LanguageString id="13785" created="2014-03-10 10:04:07.0" uuid="813f5fd6-c8f6-43e8-9a2b-1464f3ba052a" updated="2014-03-10 10:06:32.0" text="" createdby_id="30" updatedby_id="30" language_id="124"/>
+ <LanguageString id="13786" created="2014-03-10 10:04:53.0" uuid="ba17ac94-632f-4d69-ac89-a882e19ff1c5" updated="2014-03-10 10:06:32.0" text="Stem white-tomentose; leaves 1-3 mm wide, with minute overlapping, transverse segments; small subshrubs with a woody base" createdby_id="30" updatedby_id="30" language_id="124"/>
+ <LanguageString id="13787" created="2014-03-10 10:04:34.0" uuid="ab219a5d-e0c4-45fd-8405-6693c3fb8abf" updated="2014-03-10 10:06:32.0" text="" createdby_id="30" updatedby_id="30" language_id="124"/>
+ <LanguageString id="13788" created="2014-03-10 10:03:53.0" uuid="2baec690-422d-4f85-bcfd-24f5718cbecf" updated="2014-03-10 10:06:32.0" text="" createdby_id="30" updatedby_id="30" language_id="124"/>
+ <LanguageString id="13789" created="2014-03-10 10:05:16.0" uuid="7c6a7984-8e6f-48b1-86b2-d5d643199bf3" updated="2014-03-10 10:06:32.0" text="Ray-florets white" createdby_id="30" updatedby_id="30" language_id="124"/>
+ <LanguageString id="13790" created="2014-03-10 10:05:34.0" uuid="72bd8bc9-1904-47ab-8bec-b9296a98b244" updated="2014-03-10 10:06:32.0" text="Perennial herb; stem pilose, hairy or glabrescent, but not tomentose; ligules 1-2 mm diam." createdby_id="30" updatedby_id="30" language_id="124"/>
+ <LanguageString id="13791" created="2014-03-10 10:05:20.0" uuid="c917e3fb-e48b-4207-b77d-c1c108e37906" updated="2014-03-10 10:06:32.0" text="" createdby_id="30" updatedby_id="30" language_id="124"/>
+ <LanguageString id="13792" created="2014-03-10 10:06:15.0" uuid="c5dd35d8-da6a-4d05-b30c-6b55220bd989" updated="2014-03-10 10:06:32.0" text="Shrub with a woody base; stem white-tomentose or woolly; ligules 4-5 mm diam." createdby_id="30" updatedby_id="30" language_id="124"/>
+ <LanguageString id="13793" created="2014-03-10 10:06:03.0" uuid="227a17f6-1ca1-4d06-8480-25711b614863" updated="2014-03-10 10:06:32.0" text="" createdby_id="30" updatedby_id="30" language_id="124"/>
+ <LanguageString id="13794" created="2014-03-10 10:05:07.0" uuid="2c434ab1-8ca7-4464-b5cd-4cee40db41ed" updated="2014-03-10 10:06:32.0" text="" createdby_id="30" updatedby_id="30" language_id="124"/>
+ <LanguageString id="13795" created="2014-03-10 10:03:38.0" uuid="27190d54-f53b-401e-820c-edfb36d4bcbf" updated="2014-03-10 10:06:32.0" text="" createdby_id="30" updatedby_id="30" language_id="124"/>
+ <LanguageString id="13796" created="2014-03-10 10:03:25.0" uuid="69cffb28-8a85-478f-bcae-533e20938ccd" updated="2014-03-10 10:06:32.0" text="Capitula without ligulate ray-florets; leaves entire or subentire" createdby_id="30" updatedby_id="30" language_id="124"/>
+ <LanguageString id="14570" created="2014-10-09 15:42:33.0" uuid="84967760-6dbe-4af4-8e0c-309f1af6ce20" updated="2014-10-09 15:42:44.0" text="Question 1" createdby_id="10" updatedby_id="10" language_id="124"/>
+ <LanguageString id="14571" created="2014-10-09 15:42:55.0" uuid="d82f37b1-f51d-42c1-a291-0c7820db155e" updated="2014-10-09 15:43:03.0" text="Question 2" createdby_id="10" updatedby_id="10" language_id="124"/>
+ <LanguageString id="14572" created="2014-10-09 15:42:55.0" uuid="d82f37b1-f51d-42c1-a291-0c7820db155f" updated="2014-10-09 15:43:03.0" text="Koi Sach Ya Sawal" createdby_id="30" updatedby_id="30" language_id="125"/>
+
+ <TaxonBase DTYPE="Taxon" id="32" created="2011-03-01 20:11:26.0" uuid="8217ef77-2ab1-4318-bd67-ccd0cdef07c4" protectedtitlecache="false" titleCache="Achillea arabica Kotschy sec. Cyprus" doubtful="false" usenamecache="false" excluded="false" taxonstatusunknown="false" taxonomicchildrencount="0" unplaced="false" createdby_id="11" sec_id="10" publish="true"/>
+ <TaxonBase DTYPE="Taxon" id="35" created="2010-12-21 15:09:43.0" uuid="fade44fd-34b2-455f-861a-d1372b866f06" protectedtitlecache="false" titleCache="Achillea sec. Cyprus" doubtful="false" usenamecache="false" excluded="false" taxonstatusunknown="false" taxonomicchildrencount="0" unplaced="false" createdby_id="11" sec_id="10" publish="true"/>
+ <TaxonBase DTYPE="Taxon" id="36" created="2011-03-01 20:11:26.0" uuid="05f0a2e1-e3c3-4e74-8fec-8a0ae89236c3" protectedtitlecache="false" titleCache="Achillea cretica L. sec. Cyprus" doubtful="false" usenamecache="false" excluded="false" taxonstatusunknown="false" taxonomicchildrencount="0" unplaced="false" createdby_id="11" sec_id="10" publish="true"/>
+ <TaxonBase DTYPE="Taxon" id="37" created="2011-03-01 20:11:26.0" uuid="0f8d18a9-e861-48e8-bfab-83e01a379bc0" protectedtitlecache="false" titleCache="Achillea maritima (L.)Ehrend. & Y.-P. Guo subsp. maritima sec. Cyprus" doubtful="false" usenamecache="false" excluded="false" taxonstatusunknown="false" taxonomicchildrencount="0" unplaced="false" createdby_id="11" sec_id="10" publish="true"/>
+ <TaxonBase DTYPE="Taxon" id="40" created="2010-12-21 15:09:43.0" uuid="2b336df7-29e8-4f79-985f-66502739d22f" protectedtitlecache="false" titleCache="Achillea millefolium L. sec. Cyprus" doubtful="false" usenamecache="false" excluded="false" taxonstatusunknown="false" taxonomicchildrencount="0" unplaced="false" createdby_id="11" sec_id="10" publish="true"/>
+ <TaxonBase DTYPE="Taxon" id="41" created="2011-03-01 20:11:26.0" uuid="094e1af8-efd8-4605-b037-b4f715379562" protectedtitlecache="false" titleCache="Achillea santolinoides subsp. wilhelmsii (K. Koch) Greuter sec. Cyprus" doubtful="false" usenamecache="false" excluded="false" taxonstatusunknown="false" taxonomicchildrencount="0" unplaced="false" createdby_id="11" sec_id="10" publish="true"/>
+
+ <PolytomousKey_Taxon polytomousKey_id="1550" taxon_id="35"/>
+
+ <RightsInfo id="10" created="2014-10-09 15:45:53.0" uuid="bdfb572b-be25-45e7-9349-22a9da43531f" updated="2014-10-09 15:48:01.0" text="Rights Text Test" createdby_id="10" updatedby_id="10" agent_id="4808" type_id="2056"/>
+
+ <PolytomousKeyNode id="2750" created="2014-03-10 10:02:35.0" uuid="75e4c924-ff58-4ee7-a59d-fd9173517d08" updated="2014-03-10 10:02:42.0" nodenumber="1" createdby_id="30" updatedby_id="30" key_id="1550" question_id="2760" statement_id="2460"/>
+ <PolytomousKeyNode id="2751" created="2014-03-10 10:02:52.0" uuid="23e51ff7-11b1-443b-aff2-3fe8b5ace9fe" sortindex="0" key_id="1550" statement_id="2467" subkey_id="1550" taxon_id="37" parent_id="2750"/>
+ <PolytomousKeyNode id="2752" created="2014-03-10 10:03:16.0" uuid="dcf326f7-c0ad-4e76-b64e-43aea11f767c" key_id="1550"/>
+ <PolytomousKeyNode id="2753" created="2014-03-10 10:03:38.0" uuid="b775c027-13c0-4b87-8aa9-712faeaafbdc" updated="2014-03-10 10:06:32.0" nodenumber="2" sortindex="1" createdby_id="30" updatedby_id="30" key_id="1550" question_id="2761" statement_id="2460" subkey_id="1550" parent_id="2750"/>
+ <PolytomousKeyNode id="2754" created="2014-03-10 10:03:52.0" uuid="df5d5922-35de-43d5-9d46-7730ae28eeb3" updated="2014-03-10 10:06:32.0" nodenumber="3" sortindex="0" createdby_id="30" updatedby_id="30" key_id="1550" statement_id="2461" subkey_id="1550" parent_id="2753"/>
+ <PolytomousKeyNode id="2755" created="2014-03-10 10:04:07.0" uuid="0c8583ee-399e-433c-b76b-272c54dbd9f5" updated="2014-03-10 10:06:32.0" sortindex="0" createdby_id="30" updatedby_id="30" key_id="1550" statement_id="2462" taxon_id="32" parent_id="2754"/>
+ <PolytomousKeyNode id="2756" created="2014-03-10 10:04:34.0" uuid="a10e1e61-82c0-470e-a245-10a927b80c9a" updated="2014-03-10 10:06:32.0" sortindex="1" createdby_id="30" updatedby_id="30" key_id="1550" statement_id="2463" taxon_id="41" parent_id="2754"/>
+ <PolytomousKeyNode id="2757" created="2014-03-10 10:05:07.0" uuid="19f7a6a2-4c55-49cb-8b92-d68a9fd9074c" updated="2014-03-10 10:06:32.0" nodenumber="4" sortindex="1" createdby_id="30" updatedby_id="30" key_id="1550" statement_id="2464" parent_id="2753"/>
+ <PolytomousKeyNode id="2758" created="2014-03-10 10:05:20.0" uuid="0a4d86d1-fba5-4088-8dcc-6f0e7268ca5b" updated="2014-03-10 10:06:32.0" sortindex="0" createdby_id="30" updatedby_id="30" key_id="1550" statement_id="2465" taxon_id="40" parent_id="2757"/>
+ <PolytomousKeyNode id="2759" created="2014-03-10 10:06:03.0" uuid="827c9df4-ac15-4163-95ab-616d51f62803" updated="2014-03-10 10:06:32.0" sortindex="1" createdby_id="30" updatedby_id="30" key_id="1550" statement_id="2466" taxon_id="36" parent_id="2757"/>
+
+ <Credit id="20" created="2014-10-09 15:45:22.0" uuid="aa412b15-ee6c-4834-b14e-a66969cb398d" updated="2014-10-09 15:48:01.0" text="Credits Text Test" createdby_id="10" updatedby_id="10" language_id="124" agent_id="4809"/>
+
+ <KeyStatement id="2460" created="2014-03-10 10:03:48.0" uuid="66da6df7-784c-4d5a-9378-58b2cf92ba13" updated="2014-03-10 10:06:32.0" createdby_id="30" updatedby_id="30"/>
+ <KeyStatement id="2461" created="2014-03-10 10:04:03.0" uuid="f9cfd498-de47-48fd-b38c-43cf57b63750" updated="2014-03-10 10:06:32.0" createdby_id="30" updatedby_id="30"/>
+ <KeyStatement id="2462" created="2014-03-10 10:04:21.0" uuid="817fb39e-91d4-4d8c-a942-6acab47575d1" updated="2014-03-10 10:06:32.0" createdby_id="30" updatedby_id="30"/>
+ <KeyStatement id="2463" created="2014-03-10 10:04:53.0" uuid="6b571b86-7764-4f27-925c-ae5e2653f7ad" updated="2014-03-10 10:06:32.0" createdby_id="30" updatedby_id="30"/>
+ <KeyStatement id="2464" created="2014-03-10 10:05:16.0" uuid="91bbb534-abdf-4915-9f6f-a0cb41f8cf58" updated="2014-03-10 10:06:32.0" createdby_id="30" updatedby_id="30"/>
+ <KeyStatement id="2465" created="2014-03-10 10:05:34.0" uuid="1991ca31-2630-4917-8db3-eb67cec8f231" updated="2014-03-10 10:06:32.0" createdby_id="30" updatedby_id="30"/>
+ <KeyStatement id="2466" created="2014-03-10 10:06:15.0" uuid="3e1bbc59-b098-4533-ac35-245e1140a0ae" updated="2014-03-10 10:06:32.0" createdby_id="30" updatedby_id="30"/>
+ <KeyStatement id="2467" created="2014-03-10 10:03:24.0" uuid="68fd99f6-64ce-4bb8-a6af-d2cf2c046e2c" updated="2014-03-10 10:06:32.0" createdby_id="30" updatedby_id="30"/>
+ <KeyStatement id="2760" created="2014-10-09 15:42:33.0" uuid="b9702653-f620-4208-bda9-a6fe082004d1" updated="2014-10-09 15:42:44.0" createdby_id="10" updatedby_id="10"/>
+ <KeyStatement id="2761" created="2014-10-09 15:42:55.0" uuid="688a432f-4b57-4c6f-a8f6-0c468a28cb7c" updated="2014-10-09 15:43:03.0" createdby_id="10" updatedby_id="10"/>
+
+ <AgentBase DTYPE="Person" id="4809" created="2010-12-21 15:09:59.0" uuid="945d08f2-eb92-45b6-9252-6275ea6d338b" protectedtitlecache="false" titleCache="R. A. Graham" nomenclaturaltitle="R. A. Graham" createdby_id="11"/>
+
+ <Extension id="10" created="2014-10-09 15:45:41.0" uuid="0d6f35d7-7e76-446a-a017-7e8355ee1b4c" updated="2014-10-09 15:48:01.0" extendedObj_type="eu.etaxonomy.cdm.model.description.PolytomousKey" extendedObj_id="1550" value="http://test.com" createdby_id="10" updatedby_id="10" type_id="2075"/>
+
+ <PolytomousKey_OriginalSourceBase PolytomousKey_id="1550" sources_id="23710"/>
+ <PolytomousKey_OriginalSourceBase PolytomousKey_id="1550" sources_id="23711"/>
+
+ <PolytomousKey_RightsInfo PolytomousKey_id="1550" rights_id="10"/>
+
+ <KeyStatement_LanguageString KeyStatement_id="2460" label_id="13782" label_mapkey_id="124"/>
+ <KeyStatement_LanguageString KeyStatement_id="2461" label_id="13783" label_mapkey_id="124"/>
+ <KeyStatement_LanguageString KeyStatement_id="2462" label_id="13784" label_mapkey_id="124"/>
+ <KeyStatement_LanguageString KeyStatement_id="2463" label_id="13786" label_mapkey_id="124"/>
+ <KeyStatement_LanguageString KeyStatement_id="2464" label_id="13789" label_mapkey_id="124"/>
+ <KeyStatement_LanguageString KeyStatement_id="2465" label_id="13790" label_mapkey_id="124"/>
+ <KeyStatement_LanguageString KeyStatement_id="2466" label_id="13792" label_mapkey_id="124"/>
+ <KeyStatement_LanguageString KeyStatement_id="2467" label_id="13796" label_mapkey_id="124"/>
+ <KeyStatement_LanguageString KeyStatement_id="2760" label_id="14570" label_mapkey_id="124"/>
+ <KeyStatement_LanguageString KeyStatement_id="2761" label_id="14571" label_mapkey_id="124"/>
+ <KeyStatement_LanguageString KeyStatement_id="2460" label_id="14572" label_mapkey_id="125"/>
+
+ <PolytomousKey id="751" created="2013-03-24 11:17:08.0" uuid="9d8bf4f6-a70a-4b80-8556-2ccfb436ff01" protectedtitlecache="true" titleCache="Asphodeline" createdby_id="30" startNumber="1"/>
+ <PolytomousKey id="1550" created="2014-03-10 10:02:35.0" uuid="0d53ba20-7de4-4baa-bd8a-401048447d66" updated="2014-03-10 10:02:42.0" protectedtitlecache="true" titleCache="Achillea" createdby_id="30" updatedby_id="30" root_id="2750" startNumber="1"/>
+
+ <OriginalSourceBase DTYPE="IdentifiableSource" id="23710" created="2014-03-10 10:06:57.0" uuid="95e05e82-499d-4b8a-ad6b-1085f74a7496" updated="2014-03-10 10:07:33.0" sourcedObj_type="eu.etaxonomy.cdm.model.description.PolytomousKey" sourcedObj_id="1550" createdby_id="30" updatedby_id="30" citation_id="1730" sourceType="PTS"/>
+ <OriginalSourceBase DTYPE="IdentifiableSource" id="23711" created="2014-03-10 10:06:48.0" uuid="f77555fe-0d98-4c9f-98ed-a5bca6b1e342" updated="2014-03-10 10:07:33.0" sourcedObj_type="eu.etaxonomy.cdm.model.description.PolytomousKey" sourcedObj_id="1550" createdby_id="30" updatedby_id="30" citation_id="50" sourceType="PTS"/>
+
+
+</dataset>
--- /dev/null
+<?xml version="1.0" encoding="UTF-8"?>
+<beans xmlns="http://www.springframework.org/schema/beans"
+ xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
+ xmlns:context="http://www.springframework.org/schema/context"
+ xmlns:tx="http://www.springframework.org/schema/tx"
+ xsi:schemaLocation="http://www.springframework.org/schema/beans
+ http://www.springframework.org/schema/beans/spring-beans-3.1.xsd
+ http://www.springframework.org/schema/context
+ http://www.springframework.org/schema/context/spring-context-2.5.xsd
+ http://www.springframework.org/schema/tx
+ http://www.springframework.org/schema/tx/spring-tx-2.5.xsd">
+
+ <bean id="dataSource" class="org.unitils.database.UnitilsDataSourceFactoryBean"/>
+
+</beans>
--- /dev/null
+<?xml version="1.0" encoding="UTF-8"?><!--
+ generated by Jailer 4.3, Mon Oct 06 13:11:21 CEST 2014 from cmathew@cmbgbm-t530
+
+ Extraction Model: TaxonBase where uuid like '8217ef77-2ab1-4318-bd67-ccd0cdef07c4' (extractionmodel/by-example/SbE-TaxonBase-13-09-59-049.csv)
+ Database URL: jdbc:mysql://127.0.0.1:3306/local-cyprus
+ Database User: root
+
+ Exported Rows: 2
+ TaxonBase 1
+ TaxonNameBase 1
+
+--><dataset>
+ <TaxonNameBase DTYPE="BotanicalName" id="32" created="2010-12-21 15:09:43.0" uuid="f8be96d0-9af9-4e19-b9f1-52a4c0ecc580" protectedtitlecache="true" titleCache="Achillea arabica Kotschy" fullTitleCache="Achillea arabica Kotschy" parsingproblem="0" problemends="-1" problemstarts="-1" protectedfulltitlecache="false" authorshipcache="Kotschy" binomhybrid="false" genusoruninomial="Achillea" hybridformula="false" monomhybrid="false" namecache="Achillea arabica" protectedauthorshipcache="false" protectednamecache="false" specificepithet="arabica" trinomhybrid="false" anamorphic="false" createdby_id="11" homotypicalgroup_id="32" rank_id="778" />
+
+ <TaxonBase DTYPE="Taxon" id="32" created="2011-03-01 20:11:26.0" uuid="8217ef77-2ab1-4318-bd67-ccd0cdef07c4" updated="2014-09-17 09:27:47.0" protectedtitlecache="true" titleCache="Achillea arabica Kotschy sec. Cyprus" doubtful="false" usenamecache="false" excluded="false" taxonstatusunknown="false" taxonomicchildrencount="0" unplaced="false" createdby_id="11" name_id="32" sec_id="10" publish="true"/>
+
+
+</dataset>
--- /dev/null
+<?xml version="1.0" encoding="UTF-8"?><!--
+ generated by Jailer 4.3, Thu Oct 09 18:00:09 CEST 2014 from cmathew@cmbgbm-t530
+
+ Extraction Model: PolytomousKey where uuid like '0d53ba20-7de4-4baa-bd8a-401048447d66' (extractionmodel/by-example/SbE-PolytomousKey-17-59-56-907.csv)
+ Database URL: jdbc:mysql://127.0.0.1:3306/local-cyprus
+ Database User: root
+
+ Exported Rows: 79
+ AgentBase 1
+ Credit 1
+ Extension 1
+ KeyStatement 10
+ KeyStatement_LanguageString 10
+ LanguageString 19
+ OriginalSourceBase 2
+ PolytomousKey 2
+ PolytomousKeyNode 10
+ PolytomousKeyNode_LanguageString 9
+ PolytomousKey_Credit 1
+ PolytomousKey_Extension 1
+ PolytomousKey_OriginalSourceBase 2
+ PolytomousKey_RightsInfo 1
+ PolytomousKey_Taxon 1
+ RightsInfo 1
+ TaxonBase 6
+
+--><dataset>
+ <PolytomousKey_Extension PolytomousKey_id="1550" extensions_id="10"/>
+
+ <PolytomousKey_Credit PolytomousKey_id="1550" credits_id="20" sortIndex="0"/>
+
+ <PolytomousKeyNode_LanguageString PolytomousKeyNode_id="2751" modifyingtext_id="13780" modifyingtext_mapkey_id="124"/>
+ <PolytomousKeyNode_LanguageString PolytomousKeyNode_id="2752" modifyingtext_id="13781" modifyingtext_mapkey_id="124"/>
+ <PolytomousKeyNode_LanguageString PolytomousKeyNode_id="2753" modifyingtext_id="13795" modifyingtext_mapkey_id="124"/>
+ <PolytomousKeyNode_LanguageString PolytomousKeyNode_id="2754" modifyingtext_id="13788" modifyingtext_mapkey_id="124"/>
+ <PolytomousKeyNode_LanguageString PolytomousKeyNode_id="2755" modifyingtext_id="13785" modifyingtext_mapkey_id="124"/>
+ <PolytomousKeyNode_LanguageString PolytomousKeyNode_id="2756" modifyingtext_id="13787" modifyingtext_mapkey_id="124"/>
+ <PolytomousKeyNode_LanguageString PolytomousKeyNode_id="2757" modifyingtext_id="13794" modifyingtext_mapkey_id="124"/>
+ <PolytomousKeyNode_LanguageString PolytomousKeyNode_id="2758" modifyingtext_id="13791" modifyingtext_mapkey_id="124"/>
+ <PolytomousKeyNode_LanguageString PolytomousKeyNode_id="2759" modifyingtext_id="13793" modifyingtext_mapkey_id="124"/>
+
+ <LanguageString id="13780" created="2014-03-10 10:03:09.0" uuid="cceaa60b-61f4-4c8a-bb0e-d45f0fa3e2dc" text="Modifying Text 1a" language_id="124"/>
+ <LanguageString id="13781" created="2014-03-10 10:03:17.0" uuid="01a0ace4-de49-4725-9909-e881fb13035d" text="" language_id="124"/>
+ <LanguageString id="13782" created="2014-03-10 10:03:48.0" uuid="ec0fea40-69dd-4c3e-ab7a-34948037a069" updated="2014-03-10 10:06:32.0" text="Capitula with ligulate ray-florets; leaves pinnatisect" createdby_id="30" updatedby_id="30" language_id="124"/>
+ <LanguageString id="13783" created="2014-03-10 10:04:03.0" uuid="82f8a3a0-567f-4d89-ba10-3f3699111d55" updated="2014-03-10 10:06:32.0" text="Ray-florets yellow" createdby_id="30" updatedby_id="30" language_id="124"/>
+ <LanguageString id="13784" created="2014-03-10 10:04:21.0" uuid="4270501f-1efc-45c2-9e8f-c65f120e8f4c" updated="2014-03-10 10:06:32.0" text="Stem thinly pilose; leaves 10-15 mm wide, with spreading linear-subulate segments; perennial herb" createdby_id="30" updatedby_id="30" language_id="124"/>
+ <LanguageString id="13785" created="2014-03-10 10:04:07.0" uuid="813f5fd6-c8f6-43e8-9a2b-1464f3ba052a" updated="2014-03-10 10:06:32.0" text="" createdby_id="30" updatedby_id="30" language_id="124"/>
+ <LanguageString id="13786" created="2014-03-10 10:04:53.0" uuid="ba17ac94-632f-4d69-ac89-a882e19ff1c5" updated="2014-03-10 10:06:32.0" text="Stem white-tomentose; leaves 1-3 mm wide, with minute overlapping, transverse segments; small subshrubs with a woody base" createdby_id="30" updatedby_id="30" language_id="124"/>
+ <LanguageString id="13787" created="2014-03-10 10:04:34.0" uuid="ab219a5d-e0c4-45fd-8405-6693c3fb8abf" updated="2014-03-10 10:06:32.0" text="" createdby_id="30" updatedby_id="30" language_id="124"/>
+ <LanguageString id="13788" created="2014-03-10 10:03:53.0" uuid="2baec690-422d-4f85-bcfd-24f5718cbecf" updated="2014-03-10 10:06:32.0" text="" createdby_id="30" updatedby_id="30" language_id="124"/>
+ <LanguageString id="13789" created="2014-03-10 10:05:16.0" uuid="7c6a7984-8e6f-48b1-86b2-d5d643199bf3" updated="2014-03-10 10:06:32.0" text="Ray-florets white" createdby_id="30" updatedby_id="30" language_id="124"/>
+ <LanguageString id="13790" created="2014-03-10 10:05:34.0" uuid="72bd8bc9-1904-47ab-8bec-b9296a98b244" updated="2014-03-10 10:06:32.0" text="Perennial herb; stem pilose, hairy or glabrescent, but not tomentose; ligules 1-2 mm diam." createdby_id="30" updatedby_id="30" language_id="124"/>
+ <LanguageString id="13791" created="2014-03-10 10:05:20.0" uuid="c917e3fb-e48b-4207-b77d-c1c108e37906" updated="2014-03-10 10:06:32.0" text="" createdby_id="30" updatedby_id="30" language_id="124"/>
+ <LanguageString id="13792" created="2014-03-10 10:06:15.0" uuid="c5dd35d8-da6a-4d05-b30c-6b55220bd989" updated="2014-03-10 10:06:32.0" text="Shrub with a woody base; stem white-tomentose or woolly; ligules 4-5 mm diam." createdby_id="30" updatedby_id="30" language_id="124"/>
+ <LanguageString id="13793" created="2014-03-10 10:06:03.0" uuid="227a17f6-1ca1-4d06-8480-25711b614863" updated="2014-03-10 10:06:32.0" text="" createdby_id="30" updatedby_id="30" language_id="124"/>
+ <LanguageString id="13794" created="2014-03-10 10:05:07.0" uuid="2c434ab1-8ca7-4464-b5cd-4cee40db41ed" updated="2014-03-10 10:06:32.0" text="" createdby_id="30" updatedby_id="30" language_id="124"/>
+ <LanguageString id="13795" created="2014-03-10 10:03:38.0" uuid="27190d54-f53b-401e-820c-edfb36d4bcbf" updated="2014-03-10 10:06:32.0" text="" createdby_id="30" updatedby_id="30" language_id="124"/>
+ <LanguageString id="13796" created="2014-03-10 10:03:25.0" uuid="69cffb28-8a85-478f-bcae-533e20938ccd" updated="2014-03-10 10:06:32.0" text="Capitula without ligulate ray-florets; leaves entire or subentire" createdby_id="30" updatedby_id="30" language_id="124"/>
+ <LanguageString id="14570" created="2014-10-09 15:42:33.0" uuid="84967760-6dbe-4af4-8e0c-309f1af6ce20" updated="2014-10-09 15:42:44.0" text="Question 1" createdby_id="10" updatedby_id="10" language_id="124"/>
+ <LanguageString id="14571" created="2014-10-09 15:42:55.0" uuid="d82f37b1-f51d-42c1-a291-0c7820db155e" updated="2014-10-09 15:43:03.0" text="Question 2" createdby_id="10" updatedby_id="10" language_id="124"/>
+
+ <TaxonBase DTYPE="Taxon" id="32" created="2011-03-01 20:11:26.0" uuid="8217ef77-2ab1-4318-bd67-ccd0cdef07c4" protectedtitlecache="false" titleCache="Achillea arabica Kotschy sec. Cyprus" doubtful="false" usenamecache="false" excluded="false" taxonstatusunknown="false" taxonomicchildrencount="0" unplaced="false" createdby_id="11" sec_id="10" publish="true"/>
+ <TaxonBase DTYPE="Taxon" id="35" created="2010-12-21 15:09:43.0" uuid="fade44fd-34b2-455f-861a-d1372b866f06" protectedtitlecache="false" titleCache="Achillea sec. Cyprus" doubtful="false" usenamecache="false" excluded="false" taxonstatusunknown="false" taxonomicchildrencount="0" unplaced="false" createdby_id="11" sec_id="10" publish="true"/>
+ <TaxonBase DTYPE="Taxon" id="36" created="2011-03-01 20:11:26.0" uuid="05f0a2e1-e3c3-4e74-8fec-8a0ae89236c3" protectedtitlecache="false" titleCache="Achillea cretica L. sec. Cyprus" doubtful="false" usenamecache="false" excluded="false" taxonstatusunknown="false" taxonomicchildrencount="0" unplaced="false" createdby_id="11" sec_id="10" publish="true"/>
+ <TaxonBase DTYPE="Taxon" id="37" created="2011-03-01 20:11:26.0" uuid="0f8d18a9-e861-48e8-bfab-83e01a379bc0" protectedtitlecache="false" titleCache="Achillea maritima (L.)Ehrend. & Y.-P. Guo subsp. maritima sec. Cyprus" doubtful="false" usenamecache="false" excluded="false" taxonstatusunknown="false" taxonomicchildrencount="0" unplaced="false" createdby_id="11" sec_id="10" publish="true"/>
+ <TaxonBase DTYPE="Taxon" id="40" created="2010-12-21 15:09:43.0" uuid="2b336df7-29e8-4f79-985f-66502739d22f" protectedtitlecache="false" titleCache="Achillea millefolium L. sec. Cyprus" doubtful="false" usenamecache="false" excluded="false" taxonstatusunknown="false" taxonomicchildrencount="0" unplaced="false" createdby_id="11" sec_id="10" publish="true"/>
+ <TaxonBase DTYPE="Taxon" id="41" created="2011-03-01 20:11:26.0" uuid="094e1af8-efd8-4605-b037-b4f715379562" protectedtitlecache="false" titleCache="Achillea santolinoides subsp. wilhelmsii (K. Koch) Greuter sec. Cyprus" doubtful="false" usenamecache="false" excluded="false" taxonstatusunknown="false" taxonomicchildrencount="0" unplaced="false" createdby_id="11" sec_id="10" publish="true"/>
+
+ <PolytomousKey_Taxon polytomousKey_id="1550" taxon_id="35"/>
+
+ <RightsInfo id="10" created="2014-10-09 15:45:53.0" uuid="bdfb572b-be25-45e7-9349-22a9da43531f" updated="2014-10-09 15:48:01.0" text="Rights Text Test" createdby_id="10" updatedby_id="10" agent_id="4808" type_id="2056"/>
+
+ <PolytomousKeyNode id="2750" created="2014-03-10 10:02:35.0" uuid="75e4c924-ff58-4ee7-a59d-fd9173517d08" updated="2014-03-10 10:02:42.0" nodenumber="1" createdby_id="30" updatedby_id="30" key_id="1550" question_id="2760"/>
+ <PolytomousKeyNode id="2751" created="2014-03-10 10:02:52.0" uuid="23e51ff7-11b1-443b-aff2-3fe8b5ace9fe" sortindex="0" key_id="1550" statement_id="2467" subkey_id="751" taxon_id="37" parent_id="2750"/>
+ <PolytomousKeyNode id="2752" created="2014-03-10 10:03:16.0" uuid="dcf326f7-c0ad-4e76-b64e-43aea11f767c" key_id="1550"/>
+ <PolytomousKeyNode id="2753" created="2014-03-10 10:03:38.0" uuid="b775c027-13c0-4b87-8aa9-712faeaafbdc" updated="2014-03-10 10:06:32.0" nodenumber="2" sortindex="1" createdby_id="30" updatedby_id="30" key_id="1550" question_id="2761" statement_id="2460" subkey_id="751" parent_id="2750"/>
+ <PolytomousKeyNode id="2754" created="2014-03-10 10:03:52.0" uuid="df5d5922-35de-43d5-9d46-7730ae28eeb3" updated="2014-03-10 10:06:32.0" nodenumber="3" sortindex="0" createdby_id="30" updatedby_id="30" key_id="1550" statement_id="2461" subkey_id="751" parent_id="2753"/>
+ <PolytomousKeyNode id="2755" created="2014-03-10 10:04:07.0" uuid="0c8583ee-399e-433c-b76b-272c54dbd9f5" updated="2014-03-10 10:06:32.0" sortindex="0" createdby_id="30" updatedby_id="30" key_id="1550" statement_id="2462" taxon_id="32" parent_id="2754"/>
+ <PolytomousKeyNode id="2756" created="2014-03-10 10:04:34.0" uuid="a10e1e61-82c0-470e-a245-10a927b80c9a" updated="2014-03-10 10:06:32.0" sortindex="1" createdby_id="30" updatedby_id="30" key_id="1550" statement_id="2463" taxon_id="41" parent_id="2754"/>
+ <PolytomousKeyNode id="2757" created="2014-03-10 10:05:07.0" uuid="19f7a6a2-4c55-49cb-8b92-d68a9fd9074c" updated="2014-03-10 10:06:32.0" nodenumber="4" sortindex="1" createdby_id="30" updatedby_id="30" key_id="1550" statement_id="2464" parent_id="2753"/>
+ <PolytomousKeyNode id="2758" created="2014-03-10 10:05:20.0" uuid="0a4d86d1-fba5-4088-8dcc-6f0e7268ca5b" updated="2014-03-10 10:06:32.0" sortindex="0" createdby_id="30" updatedby_id="30" key_id="1550" statement_id="2465" taxon_id="40" parent_id="2757"/>
+ <PolytomousKeyNode id="2759" created="2014-03-10 10:06:03.0" uuid="827c9df4-ac15-4163-95ab-616d51f62803" updated="2014-03-10 10:06:32.0" sortindex="1" createdby_id="30" updatedby_id="30" key_id="1550" statement_id="2466" taxon_id="36" parent_id="2757"/>
+
+ <Credit id="20" created="2014-10-09 15:45:22.0" uuid="aa412b15-ee6c-4834-b14e-a66969cb398d" updated="2014-10-09 15:48:01.0" text="Credits Text Test" createdby_id="10" updatedby_id="10" language_id="124" agent_id="4809"/>
+
+ <KeyStatement id="2460" created="2014-03-10 10:03:48.0" uuid="66da6df7-784c-4d5a-9378-58b2cf92ba13" updated="2014-03-10 10:06:32.0" createdby_id="30" updatedby_id="30"/>
+ <KeyStatement id="2461" created="2014-03-10 10:04:03.0" uuid="f9cfd498-de47-48fd-b38c-43cf57b63750" updated="2014-03-10 10:06:32.0" createdby_id="30" updatedby_id="30"/>
+ <KeyStatement id="2462" created="2014-03-10 10:04:21.0" uuid="817fb39e-91d4-4d8c-a942-6acab47575d1" updated="2014-03-10 10:06:32.0" createdby_id="30" updatedby_id="30"/>
+ <KeyStatement id="2463" created="2014-03-10 10:04:53.0" uuid="6b571b86-7764-4f27-925c-ae5e2653f7ad" updated="2014-03-10 10:06:32.0" createdby_id="30" updatedby_id="30"/>
+ <KeyStatement id="2464" created="2014-03-10 10:05:16.0" uuid="91bbb534-abdf-4915-9f6f-a0cb41f8cf58" updated="2014-03-10 10:06:32.0" createdby_id="30" updatedby_id="30"/>
+ <KeyStatement id="2465" created="2014-03-10 10:05:34.0" uuid="1991ca31-2630-4917-8db3-eb67cec8f231" updated="2014-03-10 10:06:32.0" createdby_id="30" updatedby_id="30"/>
+ <KeyStatement id="2466" created="2014-03-10 10:06:15.0" uuid="3e1bbc59-b098-4533-ac35-245e1140a0ae" updated="2014-03-10 10:06:32.0" createdby_id="30" updatedby_id="30"/>
+ <KeyStatement id="2467" created="2014-03-10 10:03:24.0" uuid="68fd99f6-64ce-4bb8-a6af-d2cf2c046e2c" updated="2014-03-10 10:06:32.0" createdby_id="30" updatedby_id="30"/>
+ <KeyStatement id="2760" created="2014-10-09 15:42:33.0" uuid="b9702653-f620-4208-bda9-a6fe082004d1" updated="2014-10-09 15:42:44.0" createdby_id="10" updatedby_id="10"/>
+ <KeyStatement id="2761" created="2014-10-09 15:42:55.0" uuid="688a432f-4b57-4c6f-a8f6-0c468a28cb7c" updated="2014-10-09 15:43:03.0" createdby_id="10" updatedby_id="10"/>
+
+ <AgentBase DTYPE="Person" id="4809" created="2010-12-21 15:09:59.0" uuid="945d08f2-eb92-45b6-9252-6275ea6d338b" protectedtitlecache="false" titleCache="R. A. Graham" nomenclaturaltitle="R. A. Graham" createdby_id="11"/>
+
+ <Extension id="10" created="2014-10-09 15:45:41.0" uuid="0d6f35d7-7e76-446a-a017-7e8355ee1b4c" updated="2014-10-09 15:48:01.0" extendedObj_type="eu.etaxonomy.cdm.model.description.PolytomousKey" extendedObj_id="1550" value="http://test.com" createdby_id="10" updatedby_id="10" type_id="2075"/>
+
+ <PolytomousKey_OriginalSourceBase PolytomousKey_id="1550" sources_id="23710"/>
+ <PolytomousKey_OriginalSourceBase PolytomousKey_id="1550" sources_id="23711"/>
+
+ <PolytomousKey_RightsInfo PolytomousKey_id="1550" rights_id="10"/>
+
+ <KeyStatement_LanguageString KeyStatement_id="2460" label_id="13782" label_mapkey_id="124"/>
+ <KeyStatement_LanguageString KeyStatement_id="2461" label_id="13783" label_mapkey_id="124"/>
+ <KeyStatement_LanguageString KeyStatement_id="2462" label_id="13784" label_mapkey_id="124"/>
+ <KeyStatement_LanguageString KeyStatement_id="2463" label_id="13786" label_mapkey_id="124"/>
+ <KeyStatement_LanguageString KeyStatement_id="2464" label_id="13789" label_mapkey_id="124"/>
+ <KeyStatement_LanguageString KeyStatement_id="2465" label_id="13790" label_mapkey_id="124"/>
+ <KeyStatement_LanguageString KeyStatement_id="2466" label_id="13792" label_mapkey_id="124"/>
+ <KeyStatement_LanguageString KeyStatement_id="2467" label_id="13796" label_mapkey_id="124"/>
+ <KeyStatement_LanguageString KeyStatement_id="2760" label_id="14570" label_mapkey_id="124"/>
+ <KeyStatement_LanguageString KeyStatement_id="2761" label_id="14571" label_mapkey_id="124"/>
+
+ <PolytomousKey id="751" created="2013-03-24 11:17:08.0" uuid="9d8bf4f6-a70a-4b80-8556-2ccfb436ff01" protectedtitlecache="true" titleCache="Asphodeline" createdby_id="30" startNumber="1"/>
+ <PolytomousKey id="1550" created="2014-03-10 10:02:35.0" uuid="0d53ba20-7de4-4baa-bd8a-401048447d66" updated="2014-03-10 10:02:42.0" protectedtitlecache="true" titleCache="Achillea" createdby_id="30" updatedby_id="30" root_id="2750" startNumber="1"/>
+
+ <OriginalSourceBase DTYPE="IdentifiableSource" id="23710" created="2014-03-10 10:06:57.0" uuid="95e05e82-499d-4b8a-ad6b-1085f74a7496" updated="2014-03-10 10:07:33.0" sourcedObj_type="eu.etaxonomy.cdm.model.description.PolytomousKey" sourcedObj_id="1550" createdby_id="30" updatedby_id="30" citation_id="1730" sourceType="PTS"/>
+ <OriginalSourceBase DTYPE="IdentifiableSource" id="23711" created="2014-03-10 10:06:48.0" uuid="f77555fe-0d98-4c9f-98ed-a5bca6b1e342" updated="2014-03-10 10:07:33.0" sourcedObj_type="eu.etaxonomy.cdm.model.description.PolytomousKey" sourcedObj_id="1550" createdby_id="30" updatedby_id="30" citation_id="50" sourceType="PTS"/>
+
+ <LanguageString id="10"/>
+</dataset>
--- /dev/null
+<?xml version="1.0" encoding="UTF-8"?><!--
+ generated by Jailer 4.3, Mon Jun 29 14:15:44 CEST 2015 from cmathew@cmbgbm-t530
+
+ Extraction Model: PolytomousKey where id = 90 or id = 111 or id = 112 or id = 113 or id = 114 or id = 115 or id = 116 (extractionmodel/by-example/SbE-PolytomousKey-14-15-18-725.csv)
+ Database URL: jdbc:mysql://127.0.0.1:3306/local-cyprus
+ Database User: root
+
+ Exported Rows: 10
+ PolytomousKey 7
+ PolytomousKeyNode 3
+
+--><dataset>
+ <PolytomousKeyNode id="100" created="2012-11-23 19:53:37.0" uuid="c8e296da-441d-403b-9647-d729c00b2aa4" updated="2014-01-24 13:21:03.0" nodenumber="1" key_id="90"/>
+ <PolytomousKeyNode id="101" created="2012-11-23 19:53:54.0" uuid="588754cd-6098-40d3-bb37-05d0a6676336" sortindex="0" key_id="90" parent_id="100"/>
+ <PolytomousKeyNode id="102" created="2012-11-23 19:54:42.0" uuid="52ea0b19-f29e-49fc-8326-02292fda4e43" sortindex="1" key_id="90" parent_id="100"/>
+
+ <PolytomousKey id="90" created="2012-11-23 19:53:37.0" uuid="f82cef88-5a9e-4917-9938-d08bda40836f" protectedtitlecache="true" titleCache="Cleome" root_id="100" startNumber="1"/>
+ <PolytomousKey id="111" created="2013-02-15 16:26:38.0" uuid="a00ca7ec-b660-433c-bd14-596826ab2243" protectedtitlecache="true" titleCache="Ammi" startNumber="1"/>
+ <PolytomousKey id="112" created="2013-02-15 16:31:54.0" uuid="197bc542-bf5b-4a52-aa66-c65df32c196b" protectedtitlecache="true" titleCache="Adonis" startNumber="1"/>
+ <PolytomousKey id="113" created="2013-02-15 16:50:59.0" uuid="2ebacbb0-13f4-4407-8579-d5968e09a905" protectedtitlecache="true" titleCache="Enarthrocarpus" startNumber="1"/>
+ <PolytomousKey id="114" created="2013-02-15 16:54:31.0" uuid="0426418c-5b76-4c19-8177-6bebb4d37329" protectedtitlecache="true" titleCache="Glaucium" startNumber="1"/>
+ <PolytomousKey id="115" created="2013-02-15 17:05:42.0" uuid="6aa69b73-6242-4d3d-85c9-485aab9b1975" protectedtitlecache="true" titleCache="Sagina" startNumber="1"/>
+ <PolytomousKey id="116" created="2013-02-15 17:09:43.0" uuid="cfe7626d-49cc-4dac-acbc-601825deb44a" protectedtitlecache="true" titleCache="Dianthus" startNumber="1"/>
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+</dataset>
--- /dev/null
+<?xml version="1.0" encoding="UTF-8"?><!--
+ generated by Jailer 4.3, Fri Jun 19 09:13:03 CEST 2015 from cmathew@cmbgbm-t530
+
+ Extraction Model: all rows from Classification (extractionmodel/by-example/SbE-Classification-09-10-20-259.csv)
+ Database URL: jdbc:mysql://127.0.0.1:3306/local-cyprus
+ Database User: root
+
+ Exported Rows: 67
+ Classification 1
+ DescriptionBase 22
+ TaxonBase 14
+ TaxonNameBase 14
+ TaxonNode 16
+
+--><dataset>
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+ <DescriptionBase DTYPE="TaxonDescription" id="12353" created="2012-12-03 12:21:48.0" uuid="b8d3a151-032e-48d9-9191-d7b8fb1fe1a0" protectedtitlecache="false" titleCache="Image gallery for Cheilanthes acrostica (Balbis) Tod." imagegallery="true" taxon_id="812"/>
+ <DescriptionBase DTYPE="TaxonDescription" id="12713" created="2013-02-10 21:43:33.0" uuid="61fbdc1b-80bf-4aea-b6cb-8f4d466bd923" protectedtitlecache="false" titleCache="Image gallery for Adiantum capillus-veneris L." imagegallery="true" taxon_id="48"/>
+ <DescriptionBase DTYPE="TaxonDescription" id="13728" created="2014-02-28 19:20:29.0" uuid="53b3125e-2a43-4433-a4dd-50dd9a4cf92c" updated="2014-02-28 19:20:29.0" protectedtitlecache="true" titleCache="Import from Cyprus Excel Altitude Import" imagegallery="false" taxon_id="48"/>
+ <DescriptionBase DTYPE="TaxonDescription" id="13817" created="2014-02-28 19:20:34.0" uuid="7b108193-e689-417a-bcab-adaf6c49d532" updated="2014-02-28 19:20:34.0" protectedtitlecache="true" titleCache="Import from Cyprus Excel Altitude Import" imagegallery="false" taxon_id="264"/>
+ <DescriptionBase DTYPE="TaxonDescription" id="14043" created="2014-02-28 19:20:58.0" uuid="de29cc97-a160-4783-b996-b929157335d5" updated="2014-02-28 19:20:58.0" protectedtitlecache="true" titleCache="Import from Cyprus Excel Altitude Import" imagegallery="false" taxon_id="812"/>
+ <DescriptionBase DTYPE="TaxonDescription" id="14101" created="2014-02-28 19:21:07.0" uuid="815336d3-19d6-493d-9ea4-bcb320d1b922" updated="2014-02-28 19:21:08.0" protectedtitlecache="true" titleCache="Import from Cyprus Excel Altitude Import" imagegallery="false" taxon_id="946"/>
+ <DescriptionBase DTYPE="TaxonDescription" id="14658" created="2014-02-28 19:23:51.0" uuid="ce4068f8-17b0-46e2-9fbb-e8c16efb7255" updated="2014-02-28 19:23:51.0" protectedtitlecache="true" titleCache="Import from Cyprus Excel Altitude Import" imagegallery="false" taxon_id="2203"/>
+ <DescriptionBase DTYPE="TaxonDescription" id="14864" created="2014-02-28 19:25:21.0" uuid="2d55f445-8e72-43d3-976a-133828e89599" updated="2014-02-28 19:25:21.0" protectedtitlecache="true" titleCache="Import from Cyprus Excel Altitude Import" imagegallery="false" taxon_id="2737"/>
+
+ <SynonymRelationship/>
+
+ <LanguageString id="10"/>
+</dataset>
--- /dev/null
+<?xml version="1.0" encoding="UTF-8"?><!--
+ generated by Jailer 4.3, Wed Mar 04 16:11:14 CET 2015 from cmathew@cmbgbm-t530
+
+ Extraction Model: all rows from Classification (extractionmodel/by-example/SbE-Classification-16-11-06-737.csv)
+ Database URL: jdbc:mysql://127.0.0.1:3306/local-cyprus
+ Database User: root
+
+ Exported Rows: 31
+ Classification 1
+ HomotypicalGroup 2
+ SynonymRelationship 1
+ TaxonBase 5
+ TaxonNameBase 3
+ TaxonNode 19
+
+--><dataset>
+
+
+ <TaxonNode id="347" created="2010-12-21 15:09:45.0" uuid="d425a971-1abe-4895-9e1f-1e5c8ff1c84c" countchildren="0" classification_id="10" taxon_id="387" treeIndex="#t10#4032#49#346#345#347#" sortIndex="1"/>
+ <TaxonNode id="351" created="2010-12-21 15:09:46.0" uuid="ce54c396-3694-47f2-abb0-1d7b7e057985" countchildren="0" classification_id="10" taxon_id="394" treeIndex="#t10#4032#49#346#345#351#" sortIndex="4"/>
+
+ <HomotypicalGroup id="368" created="2010-12-21 15:09:45.0" uuid="d7eaa174-4efd-4d09-a427-dce4ed6513f7" />
+ <HomotypicalGroup id="375" created="2010-12-21 15:09:46.0" uuid="62ed57d6-2c69-4404-bb95-248a1c9bb24c" />
+
+ <TaxonNameBase DTYPE="BotanicalName" id="387" created="2010-12-21 15:09:45.0" uuid="d25985c7-6fb4-4b31-8a94-5d7c5ba6ad16" protectedtitlecache="false" titleCache="Asplenium ceterach L." fullTitleCache="Asplenium ceterach L." parsingproblem="0" problemends="-1" problemstarts="-1" protectedfulltitlecache="false" authorshipcache="L." binomhybrid="false" genusoruninomial="Asplenium" hybridformula="false" monomhybrid="false" namecache="Asplenium ceterach" protectedauthorshipcache="false" protectednamecache="false" specificepithet="ceterach" trinomhybrid="false" anamorphic="false" homotypicalgroup_id="368" rank_id="778" />
+ <TaxonNameBase DTYPE="BotanicalName" id="388" created="2010-12-21 15:09:45.0" uuid="747021f1-cf5f-4249-a825-228da3368399" protectedtitlecache="true" titleCache="Asplenium cyprium Viane & Van den heede" fullTitleCache="Asplenium cyprium Viane & Van den heede" parsingproblem="16" problemends="-1" problemstarts="-1" protectedfulltitlecache="false" authorshipcache="" binomhybrid="false" hybridformula="false" monomhybrid="false" namecache="Asplenium cyprium Viane & Van den heede" protectedauthorshipcache="false" protectednamecache="true" trinomhybrid="false" anamorphic="false" />
+ <TaxonNameBase DTYPE="BotanicalName" id="394" created="2010-12-21 15:09:46.0" uuid="08f8f376-c9a4-4ea9-950d-3ac30b7fa689" protectedtitlecache="false" titleCache="Asplenium viride Huds." fullTitleCache="Asplenium viride Huds." parsingproblem="0" problemends="-1" problemstarts="-1" protectedfulltitlecache="false" authorshipcache="Huds." binomhybrid="false" genusoruninomial="Asplenium" hybridformula="false" monomhybrid="false" namecache="Asplenium viride" protectedauthorshipcache="false" protectednamecache="false" specificepithet="viride" trinomhybrid="false" anamorphic="false" homotypicalgroup_id="375" rank_id="778" />
+
+ <Classification id="10" created="2010-12-21 15:09:43.0" uuid="0c2b5d25-7b15-4401-8b51-dd4be0ee5cab" protectedtitlecache="false" titleCache="Cyprus" name_id="10" reference_id="10" />
+
+ <TaxonBase DTYPE="Taxon" id="387" created="2011-03-01 20:11:27.0" uuid="9763e5f0-6cd4-4d96-b8a4-4420854f7727" protectedtitlecache="false" titleCache="Asplenium ceterach L. sec. Cyprus" doubtful="false" usenamecache="false" excluded="false" taxonstatusunknown="false" taxonomicchildrencount="0" unplaced="false" name_id="387" sec_id="10" publish="true"/>
+ <TaxonBase DTYPE="Synonym" id="388" created="2010-12-21 15:09:45.0" uuid="1eb173bd-b174-4162-8ff5-5136d8f1e746" protectedtitlecache="false" titleCache="Asplenium cyprium Viane & Van den heede sec. Cyprus" doubtful="false" usenamecache="false" name_id="388" sec_id="10" publish="true"/>
+ <TaxonBase DTYPE="Taxon" id="394" created="2011-03-01 20:11:27.0" uuid="aff4fa6f-9aa8-463d-ac07-ec8a1925eb57" protectedtitlecache="false" titleCache="Asplenium viride Huds. sec. Cyprus" doubtful="false" usenamecache="false" excluded="false" taxonstatusunknown="false" taxonomicchildrencount="0" unplaced="false" name_id="394" sec_id="10" publish="true"/>
+
+ <SynonymRelationship id="50" created="2010-12-21 15:09:45.0" uuid="60d1466f-5823-4a69-a071-1887d0c1e72b" doubtful="false" partial="false" proparte="false" relatedfrom_id="388" relatedto_id="387" />
+
+ <LanguageString id="10"/>
+</dataset>
--- /dev/null
+<?xml version="1.0" encoding="UTF-8"?><!--
+ generated by Jailer 4.3, Mon Jun 22 14:57:08 CEST 2015 from cmathew@cmbgbm-t530
+
+ Extraction Model: all rows from Classification (extractionmodel/by-example/SbE-Classification-14-56-50-312.csv)
+ Database URL: jdbc:mysql://127.0.0.1:3306/local-cyprus
+ Database User: root
+
+ Exported Rows: 6
+ Classification 1
+ TaxonBase 2
+ TaxonNode 3
+
+--><dataset>
+ <TaxonNode id="13" created="2010-12-21 15:09:43.0" uuid="0ac32f24-6d55-44ae-8519-c86c83faa938" countchildren="122" classification_id="10" parent_id="4032" taxon_id="11" treeIndex="#t10#4032#13#" sortIndex="0"/>
+ <TaxonNode id="49" created="2010-12-21 15:09:43.0" uuid="572290a9-7535-48c8-9f68-25ddbc9869ee" countchildren="10" classification_id="10" parent_id="4032" taxon_id="49" treeIndex="#t10#4032#49#" sortIndex="1"/>
+ <TaxonNode id="4032" created="2014-01-16 10:24:29.0" uuid="29b3fd3f-29b4-4011-ab12-9c1ad1607dbd" countchildren="2" classification_id="10" treeIndex="#t10#4032#"/>
+
+ <Classification id="10" created="2010-12-21 15:09:43.0" uuid="0c2b5d25-7b15-4401-8b51-dd4be0ee5cab" updated="2015-06-09 07:10:42.0" protectedtitlecache="false" titleCache="Cyprus" updatedby_id="10" rootnode_id="4032"/>
+
+ <TaxonBase DTYPE="Taxon" id="11" created="2010-12-21 15:09:43.0" uuid="575347a4-fac0-4af7-8514-a4246b45fd7d" protectedtitlecache="false" titleCache="Spermatophyta sec. Cyprus" doubtful="false" usenamecache="false" excluded="false" taxonstatusunknown="false" taxonomicchildrencount="0" unplaced="false" publish="true"/>
+ <TaxonBase DTYPE="Taxon" id="49" created="2010-12-21 15:09:43.0" uuid="1141a510-5ee8-4a59-ae60-7b4fea44872f" protectedtitlecache="false" titleCache="Pteridophyta sec. Cyprus" doubtful="false" usenamecache="false" excluded="false" taxonstatusunknown="false" taxonomicchildrencount="0" unplaced="false" publish="true"/>
+
+
+</dataset>
--- /dev/null
+<?xml version="1.0" encoding="UTF-8"?><!--
+ generated by Jailer 4.3, Fri Jun 19 09:13:03 CEST 2015 from cmathew@cmbgbm-t530
+
+ Extraction Model: all rows from Classification (extractionmodel/by-example/SbE-Classification-09-10-20-259.csv)
+ Database URL: jdbc:mysql://127.0.0.1:3306/local-cyprus
+ Database User: root
+
+ Exported Rows: 67
+ Classification 1
+ DescriptionBase 22
+ TaxonBase 14
+ TaxonNameBase 14
+ TaxonNode 16
+
+--><dataset>
+ <TaxonNode id="46" created="2010-12-21 15:09:43.0" uuid="168a4d09-a2b0-4206-b4cc-5d13199f9306" countchildren="0" classification_id="10" parent_id="47" taxon_id="48" treeIndex="#t10#4032#49#48#47#46#" sortIndex="0"/>
+ <TaxonNode id="47" created="2010-12-21 15:09:43.0" uuid="2f05d429-632d-4230-b9cb-70299360b470" countchildren="1" classification_id="10" parent_id="48" taxon_id="51" treeIndex="#t10#4032#49#48#47#" sortIndex="0"/>
+ <TaxonNode id="48" created="2010-12-21 15:09:43.0" uuid="24773d3b-8f11-4400-99de-71658982b245" countchildren="6" classification_id="10" parent_id="49" treeIndex="#t10#4032#49#48#" sortIndex="0"/>
+ <TaxonNode id="49" created="2010-12-21 15:09:43.0" uuid="572290a9-7535-48c8-9f68-25ddbc9869ee" countchildren="10" classification_id="10" parent_id="4032" taxon_id="49" treeIndex="#t10#4032#49#" sortIndex="0"/>
+ <TaxonNode id="236" created="2010-12-21 15:09:45.0" uuid="f5d97f8b-c673-4050-af06-bbfab33baaec" countchildren="0" classification_id="10" parent_id="237" taxon_id="264" treeIndex="#t10#4032#49#48#237#236#" sortIndex="0"/>
+ <TaxonNode id="237" created="2010-12-21 15:09:45.0" uuid="4998de90-d0be-433b-a62f-0d57a1e399b0" countchildren="1" classification_id="10" parent_id="48" taxon_id="265" treeIndex="#t10#4032#49#48#237#" sortIndex="1"/>
+ <TaxonNode id="714" created="2010-12-21 15:09:48.0" uuid="b85b5b78-6760-409f-ac91-bb89e95ff2a1" countchildren="0" classification_id="10" parent_id="715" taxon_id="812" treeIndex="#t10#4032#49#48#715#714#" sortIndex="0"/>
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+ <TaxonNode id="716" created="2010-12-21 15:09:48.0" uuid="6ad8e9e2-f5f6-41ad-aa30-f62a903650db" countchildren="0" classification_id="10" parent_id="715" taxon_id="815" treeIndex="#t10#4032#49#48#715#716#" sortIndex="1"/>
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+ <TaxonNode id="829" created="2010-12-21 15:09:49.0" uuid="4fe03763-b966-4361-8334-352f6f777588" countchildren="1" classification_id="10" parent_id="48" taxon_id="948" treeIndex="#t10#4032#49#48#829#" sortIndex="3"/>
+ <TaxonNode id="1915" created="2010-12-21 15:09:57.0" uuid="99f03b56-67cd-4e01-9ceb-2362d48f9d07" countchildren="0" classification_id="10" parent_id="1916" taxon_id="2203" treeIndex="#t10#4032#49#48#1916#1915#" sortIndex="0"/>
+ <TaxonNode id="1916" created="2010-12-21 15:09:57.0" uuid="d8998200-500f-4312-90f4-2b60e6fd3a78" countchildren="1" classification_id="10" parent_id="48" taxon_id="2205" treeIndex="#t10#4032#49#48#1916#" sortIndex="4"/>
+ <TaxonNode id="2354" created="2010-12-21 15:10:00.0" uuid="b8439f51-6b96-445a-b401-7a836ba1cf58" countchildren="0" classification_id="10" parent_id="2355" taxon_id="2737" treeIndex="#t10#4032#49#48#2355#2354#" sortIndex="0"/>
+ <TaxonNode id="2355" created="2010-12-21 15:10:00.0" uuid="6da4e5b6-ebc3-4c46-bdce-24161b7bd0e2" countchildren="1" classification_id="10" parent_id="48" taxon_id="2738" treeIndex="#t10#4032#49#48#2355#" sortIndex="5"/>
+ <TaxonNode id="4032" created="2014-01-16 10:24:29.0" uuid="29b3fd3f-29b4-4011-ab12-9c1ad1607dbd" countchildren="1" classification_id="10" treeIndex="#t10#4032#"/>
+
+ <TaxonNameBase DTYPE="BotanicalName" id="48" created="2010-12-21 15:09:43.0" uuid="7aceb517-2b91-46b9-a5a2-88b7e0fb3230" protectedtitlecache="false" titleCache="Adiantum capillus-veneris L." fullTitleCache="Adiantum capillus-veneris L." parsingproblem="0" problemends="-1" problemstarts="-1" protectedfulltitlecache="false" authorshipcache="L." binomhybrid="false" genusoruninomial="Adiantum" hybridformula="false" monomhybrid="false" namecache="Adiantum capillus-veneris" protectedauthorshipcache="false" protectednamecache="false" specificepithet="capillus-veneris" trinomhybrid="false" anamorphic="false" rank_id="778" />
+ <TaxonNameBase DTYPE="BotanicalName" id="49" created="2010-12-21 15:09:43.0" uuid="079fff38-ff2d-426b-a49e-70b0f1db6c31" protectedtitlecache="false" titleCache="Pteridophyta" fullTitleCache="Pteridophyta" parsingproblem="0" problemends="-1" problemstarts="-1" protectedfulltitlecache="false" authorshipcache="" binomhybrid="false" genusoruninomial="Pteridophyta" hybridformula="false" monomhybrid="false" namecache="Pteridophyta" protectedauthorshipcache="false" protectednamecache="false" trinomhybrid="false" anamorphic="false" rank_id="810"/>
+ <TaxonNameBase DTYPE="BotanicalName" id="51" created="2010-12-21 15:09:43.0" uuid="c8af63e0-7bd4-4fad-aa2d-3777cbe1210a" protectedtitlecache="false" titleCache="Adiantum" fullTitleCache="Adiantum" parsingproblem="0" problemends="-1" problemstarts="-1" protectedfulltitlecache="false" authorshipcache="" binomhybrid="false" genusoruninomial="Adiantum" hybridformula="false" monomhybrid="false" namecache="Adiantum" protectedauthorshipcache="false" protectednamecache="false" trinomhybrid="false" anamorphic="false" rank_id="788"/>
+ <TaxonNameBase DTYPE="BotanicalName" id="264" created="2010-12-21 15:09:45.0" uuid="b976da6a-dd84-4fcd-9a1b-9847afba1da2" protectedtitlecache="false" titleCache="Anogramma leptophylla (L.) Link" fullTitleCache="Anogramma leptophylla (L.) Link" parsingproblem="0" problemends="-1" problemstarts="-1" protectedfulltitlecache="false" authorshipcache="(L.) Link" binomhybrid="false" genusoruninomial="Anogramma" hybridformula="false" monomhybrid="false" namecache="Anogramma leptophylla" protectedauthorshipcache="false" protectednamecache="false" specificepithet="leptophylla" trinomhybrid="false" anamorphic="false" rank_id="778" />
+ <TaxonNameBase DTYPE="BotanicalName" id="265" created="2010-12-21 15:09:45.0" uuid="c7f1db22-20fb-4eeb-810b-d37c5593b95d" protectedtitlecache="false" titleCache="Anogramma" fullTitleCache="Anogramma" parsingproblem="0" problemends="-1" problemstarts="-1" protectedfulltitlecache="false" authorshipcache="" binomhybrid="false" genusoruninomial="Anogramma" hybridformula="false" monomhybrid="false" namecache="Anogramma" protectedauthorshipcache="false" protectednamecache="false" trinomhybrid="false" anamorphic="false" rank_id="788"/>
+ <TaxonNameBase DTYPE="BotanicalName" id="812" created="2010-12-21 15:09:48.0" uuid="16450a2d-2085-471f-804a-defcd43c03e4" protectedtitlecache="false" titleCache="Cheilanthes acrostica (Balb.) Tod." fullTitleCache="Cheilanthes acrostica (Balb.) Tod." parsingproblem="0" problemends="-1" problemstarts="-1" protectedfulltitlecache="false" authorshipcache="(Balb.) Tod." binomhybrid="false" genusoruninomial="Cheilanthes" hybridformula="false" monomhybrid="false" namecache="Cheilanthes acrostica" protectedauthorshipcache="false" protectednamecache="false" specificepithet="acrostica" trinomhybrid="false" anamorphic="false" rank_id="778" />
+ <TaxonNameBase DTYPE="BotanicalName" id="814" created="2010-12-21 15:09:48.0" uuid="bbb1c5be-5a0c-45e2-b8af-f37a80ccf858" protectedtitlecache="false" titleCache="Cheilanthes" fullTitleCache="Cheilanthes" parsingproblem="0" problemends="-1" problemstarts="-1" protectedfulltitlecache="false" authorshipcache="" binomhybrid="false" genusoruninomial="Cheilanthes" hybridformula="false" monomhybrid="false" namecache="Cheilanthes" protectedauthorshipcache="false" protectednamecache="false" trinomhybrid="false" anamorphic="false" rank_id="788"/>
+ <TaxonNameBase DTYPE="BotanicalName" id="815" created="2010-12-21 15:09:48.0" uuid="f04a9283-f856-4d28-b469-4a222472862b" protectedtitlecache="false" titleCache="Cheilanthes maderensis Lowe" fullTitleCache="Cheilanthes maderensis Lowe" parsingproblem="0" problemends="-1" problemstarts="-1" protectedfulltitlecache="false" authorshipcache="Lowe" binomhybrid="false" genusoruninomial="Cheilanthes" hybridformula="false" monomhybrid="false" namecache="Cheilanthes maderensis" protectedauthorshipcache="false" protectednamecache="false" specificepithet="maderensis" trinomhybrid="false" anamorphic="false" rank_id="778" />
+ <TaxonNameBase DTYPE="BotanicalName" id="946" created="2010-12-21 15:09:49.0" uuid="e30ef44b-52e4-41ff-a68d-9912d3c537f1" protectedtitlecache="false" titleCache="Cosentinia vellea (Aiton) Tod." fullTitleCache="Cosentinia vellea (Aiton) Tod." parsingproblem="0" problemends="-1" problemstarts="-1" protectedfulltitlecache="false" authorshipcache="(Aiton) Tod." binomhybrid="false" genusoruninomial="Cosentinia" hybridformula="false" monomhybrid="false" namecache="Cosentinia vellea" protectedauthorshipcache="false" protectednamecache="false" specificepithet="vellea" trinomhybrid="false" anamorphic="false" rank_id="778" />
+ <TaxonNameBase DTYPE="BotanicalName" id="948" created="2010-12-21 15:09:49.0" uuid="21fda99e-0425-4f29-b7b2-196f8a51b054" protectedtitlecache="false" titleCache="Cosentinia" fullTitleCache="Cosentinia" parsingproblem="0" problemends="-1" problemstarts="-1" protectedfulltitlecache="false" authorshipcache="" binomhybrid="false" genusoruninomial="Cosentinia" hybridformula="false" monomhybrid="false" namecache="Cosentinia" protectedauthorshipcache="false" protectednamecache="false" trinomhybrid="false" anamorphic="false" rank_id="788"/>
+ <TaxonNameBase DTYPE="BotanicalName" id="2203" created="2010-12-21 15:09:57.0" uuid="8fe0bb4b-7687-4d32-8ff2-94e690980f81" protectedtitlecache="false" titleCache="Notholaena marantae (L.) Desv." fullTitleCache="Notholaena marantae (L.) Desv." parsingproblem="0" problemends="-1" problemstarts="-1" protectedfulltitlecache="false" authorshipcache="(L.) Desv." binomhybrid="false" genusoruninomial="Notholaena" hybridformula="false" monomhybrid="false" namecache="Notholaena marantae" protectedauthorshipcache="false" protectednamecache="false" specificepithet="marantae" trinomhybrid="false" anamorphic="false" rank_id="778" />
+ <TaxonNameBase DTYPE="BotanicalName" id="2205" created="2010-12-21 15:09:57.0" uuid="77b7934f-8f62-4798-b96a-f3d12bfd5ebf" protectedtitlecache="false" titleCache="Notholaena" fullTitleCache="Notholaena" parsingproblem="0" problemends="-1" problemstarts="-1" protectedfulltitlecache="false" authorshipcache="" binomhybrid="false" genusoruninomial="Notholaena" hybridformula="false" monomhybrid="false" namecache="Notholaena" protectedauthorshipcache="false" protectednamecache="false" trinomhybrid="false" anamorphic="false" rank_id="788"/>
+ <TaxonNameBase DTYPE="BotanicalName" id="2737" created="2010-12-21 15:10:00.0" uuid="25560d66-07a3-41ce-8244-36ca98638c71" protectedtitlecache="false" titleCache="Pteris vittata L." fullTitleCache="Pteris vittata L." parsingproblem="0" problemends="-1" problemstarts="-1" protectedfulltitlecache="false" authorshipcache="L." binomhybrid="false" genusoruninomial="Pteris" hybridformula="false" monomhybrid="false" namecache="Pteris vittata" protectedauthorshipcache="false" protectednamecache="false" specificepithet="vittata" trinomhybrid="false" anamorphic="false" rank_id="778" />
+ <TaxonNameBase DTYPE="BotanicalName" id="2738" created="2010-12-21 15:10:00.0" uuid="a40593ce-e8cc-43bb-a391-2de988b09039" protectedtitlecache="false" titleCache="Pteris" fullTitleCache="Pteris" parsingproblem="0" problemends="-1" problemstarts="-1" protectedfulltitlecache="false" authorshipcache="" binomhybrid="false" genusoruninomial="Pteris" hybridformula="false" monomhybrid="false" namecache="Pteris" protectedauthorshipcache="false" protectednamecache="false" trinomhybrid="false" anamorphic="false" rank_id="788"/>
+
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--- /dev/null
+<?xml version="1.0" encoding="UTF-8"?><!--
+ generated by Jailer 4.3, Fri Jun 19 09:13:03 CEST 2015 from cmathew@cmbgbm-t530
+
+ Extraction Model: all rows from Classification (extractionmodel/by-example/SbE-Classification-09-10-20-259.csv)
+ Database URL: jdbc:mysql://127.0.0.1:3306/local-cyprus
+ Database User: root
+
+ Exported Rows: 67
+ Classification 1
+ DescriptionBase 22
+ TaxonBase 14
+ TaxonNameBase 14
+ TaxonNode 16
+
+--><dataset>
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+ <DescriptionBase DTYPE="TaxonDescription" id="4840" created="2011-03-01 19:20:48.0" uuid="73396d11-5d35-43fb-8b15-4d472bdcdd43" updated="2011-03-01 20:11:30.0" protectedtitlecache="true" titleCache="Cyprus Distributions Excel Import for Cosentinia vellea (Aiton) Tod. sec. Cyprus" imagegallery="false" taxon_id="946"/>
+ <DescriptionBase DTYPE="TaxonDescription" id="5409" created="2011-03-01 19:20:55.0" uuid="64a797b2-7f92-4012-a4f5-d76f8aaeb6b4" updated="2011-03-01 20:11:39.0" protectedtitlecache="true" titleCache="Cyprus Distributions Excel Import for Pteris vittata L. sec. Cyprus" imagegallery="false" taxon_id="2737"/>
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+ <SynonymRelationship/>
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+ <LanguageString id="10"/>
+</dataset>
--- /dev/null
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+<dataset>
+ <TaxonNameBase />
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+ <TaxonNode />
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\ No newline at end of file
--- /dev/null
+<?xml version="1.0" encoding="UTF-8"?><!--
+ generated by Jailer 4.3, Thu Oct 09 18:00:09 CEST 2014 from cmathew@cmbgbm-t530
+
+ Extraction Model: PolytomousKey where uuid like '0d53ba20-7de4-4baa-bd8a-401048447d66' (extractionmodel/by-example/SbE-PolytomousKey-17-59-56-907.csv)
+ Database URL: jdbc:mysql://127.0.0.1:3306/local-cyprus
+ Database User: root
+
+ Exported Rows: 79
+ AgentBase 1
+ Credit 1
+ Extension 1
+ KeyStatement 10
+ KeyStatement_LanguageString 10
+ LanguageString 19
+ OriginalSourceBase 2
+ PolytomousKey 2
+ PolytomousKeyNode 10
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+ PolytomousKey_Credit 1
+ PolytomousKey_Extension 1
+ PolytomousKey_OriginalSourceBase 2
+ PolytomousKey_RightsInfo 1
+ PolytomousKey_Taxon 1
+ RightsInfo 1
+ TaxonBase 6
+
+--><dataset>
+ <PolytomousKey_Extension PolytomousKey_id="1550" extensions_id="10"/>
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+ <PolytomousKey_Credit PolytomousKey_id="1550" credits_id="20" sortIndex="0"/>
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+ <PolytomousKeyNode_LanguageString PolytomousKeyNode_id="2751" modifyingtext_id="13780" modifyingtext_mapkey_id="124"/>
+ <PolytomousKeyNode_LanguageString PolytomousKeyNode_id="2752" modifyingtext_id="13781" modifyingtext_mapkey_id="124"/>
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+ <PolytomousKeyNode_LanguageString PolytomousKeyNode_id="2754" modifyingtext_id="13788" modifyingtext_mapkey_id="124"/>
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+ <PolytomousKeyNode_LanguageString PolytomousKeyNode_id="2756" modifyingtext_id="13787" modifyingtext_mapkey_id="124"/>
+ <PolytomousKeyNode_LanguageString PolytomousKeyNode_id="2757" modifyingtext_id="13794" modifyingtext_mapkey_id="124"/>
+ <PolytomousKeyNode_LanguageString PolytomousKeyNode_id="2758" modifyingtext_id="13791" modifyingtext_mapkey_id="124"/>
+ <PolytomousKeyNode_LanguageString PolytomousKeyNode_id="2759" modifyingtext_id="13793" modifyingtext_mapkey_id="124"/>
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+ <LanguageString id="13780" created="2014-03-10 10:03:09.0" uuid="cceaa60b-61f4-4c8a-bb0e-d45f0fa3e2dc" text="Modifying Text 1a" language_id="124"/>
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+ <TaxonBase DTYPE="Taxon" id="35" created="2010-12-21 15:09:43.0" uuid="fade44fd-34b2-455f-861a-d1372b866f06" protectedtitlecache="false" titleCache="Achillea sec. Cyprus" doubtful="false" usenamecache="false" excluded="false" taxonstatusunknown="false" taxonomicchildrencount="0" unplaced="false" createdby_id="11" sec_id="10" publish="true"/>
+ <TaxonBase DTYPE="Taxon" id="36" created="2011-03-01 20:11:26.0" uuid="05f0a2e1-e3c3-4e74-8fec-8a0ae89236c3" protectedtitlecache="false" titleCache="Achillea cretica L. sec. Cyprus" doubtful="false" usenamecache="false" excluded="false" taxonstatusunknown="false" taxonomicchildrencount="0" unplaced="false" createdby_id="11" sec_id="10" publish="true"/>
+ <TaxonBase DTYPE="Taxon" id="37" created="2011-03-01 20:11:26.0" uuid="0f8d18a9-e861-48e8-bfab-83e01a379bc0" protectedtitlecache="false" titleCache="Achillea maritima (L.)Ehrend. & Y.-P. Guo subsp. maritima sec. Cyprus" doubtful="false" usenamecache="false" excluded="false" taxonstatusunknown="false" taxonomicchildrencount="0" unplaced="false" createdby_id="11" sec_id="10" publish="true"/>
+ <TaxonBase DTYPE="Taxon" id="40" created="2010-12-21 15:09:43.0" uuid="2b336df7-29e8-4f79-985f-66502739d22f" protectedtitlecache="false" titleCache="Achillea millefolium L. sec. Cyprus" doubtful="false" usenamecache="false" excluded="false" taxonstatusunknown="false" taxonomicchildrencount="0" unplaced="false" createdby_id="11" sec_id="10" publish="true"/>
+ <TaxonBase DTYPE="Taxon" id="41" created="2011-03-01 20:11:26.0" uuid="094e1af8-efd8-4605-b037-b4f715379562" protectedtitlecache="false" titleCache="Achillea santolinoides subsp. wilhelmsii (K. Koch) Greuter sec. Cyprus" doubtful="false" usenamecache="false" excluded="false" taxonstatusunknown="false" taxonomicchildrencount="0" unplaced="false" createdby_id="11" sec_id="10" publish="true"/>
+
+ <PolytomousKey_Taxon polytomousKey_id="1550" taxon_id="35"/>
+
+ <RightsInfo id="10" created="2014-10-09 15:45:53.0" uuid="bdfb572b-be25-45e7-9349-22a9da43531f" updated="2014-10-09 15:48:01.0" text="Rights Text Test" createdby_id="10" updatedby_id="10" agent_id="4809" type_id="2056"/>
+
+
+ <PolytomousKeyNode id="2750" created="2014-03-10 10:02:35.0" uuid="75e4c924-ff58-4ee7-a59d-fd9173517d08" updated="2014-03-10 10:02:42.0" nodenumber="1" key_id="1550" question_id="2760"/>
+ <PolytomousKeyNode id="2751" created="2014-03-10 10:02:52.0" uuid="23e51ff7-11b1-443b-aff2-3fe8b5ace9fe" sortindex="0" key_id="1550" statement_id="2467" subkey_id="751" taxon_id="37" parent_id="2750"/>
+ <PolytomousKeyNode id="2752" created="2014-03-10 10:03:16.0" uuid="dcf326f7-c0ad-4e76-b64e-43aea11f767c" key_id="1550"/>
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+ <PolytomousKeyNode id="2754" created="2014-03-10 10:03:52.0" uuid="df5d5922-35de-43d5-9d46-7730ae28eeb3" updated="2014-03-10 10:06:32.0" nodenumber="3" sortindex="0" key_id="1550" statement_id="2461" subkey_id="751" parent_id="2753"/>
+ <PolytomousKeyNode id="2755" created="2014-03-10 10:04:07.0" uuid="0c8583ee-399e-433c-b76b-272c54dbd9f5" updated="2014-03-10 10:06:32.0" sortindex="0" key_id="1550" statement_id="2462" taxon_id="32" parent_id="2754"/>
+ <PolytomousKeyNode id="2756" created="2014-03-10 10:04:34.0" uuid="a10e1e61-82c0-470e-a245-10a927b80c9a" updated="2014-03-10 10:06:32.0" sortindex="1" key_id="1550" statement_id="2463" taxon_id="41" parent_id="2754"/>
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+ <PolytomousKeyNode id="2759" created="2014-03-10 10:06:03.0" uuid="827c9df4-ac15-4163-95ab-616d51f62803" updated="2014-03-10 10:06:32.0" sortindex="1" key_id="1550" statement_id="2466" taxon_id="36" parent_id="2757"/>
+
+ <Credit id="20" created="2014-10-09 15:45:22.0" uuid="aa412b15-ee6c-4834-b14e-a66969cb398d" updated="2014-10-09 15:48:01.0" text="Credits Text Test" createdby_id="10" updatedby_id="10" language_id="124" agent_id="4809"/>
+
+ <KeyStatement id="2460" created="2014-03-10 10:03:48.0" uuid="66da6df7-784c-4d5a-9378-58b2cf92ba13" updated="2014-03-10 10:06:32.0" />
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+ <KeyStatement id="2467" created="2014-03-10 10:03:24.0" uuid="68fd99f6-64ce-4bb8-a6af-d2cf2c046e2c" updated="2014-03-10 10:06:32.0" />
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+ <AgentBase DTYPE="Person" id="4809" created="2010-12-21 15:09:59.0" uuid="945d08f2-eb92-45b6-9252-6275ea6d338b" protectedtitlecache="false" titleCache="R. A. Graham" nomenclaturaltitle="R. A. Graham"/>
+
+ <Extension id="10" created="2014-10-09 15:45:41.0" uuid="0d6f35d7-7e76-446a-a017-7e8355ee1b4c" updated="2014-10-09 15:48:01.0" extendedObj_type="eu.etaxonomy.cdm.model.description.PolytomousKey" extendedObj_id="1550" value="http://test.com" createdby_id="10" updatedby_id="10" type_id="2075"/>
+
+ <PolytomousKey_OriginalSourceBase PolytomousKey_id="1550" sources_id="23710"/>
+ <PolytomousKey_OriginalSourceBase PolytomousKey_id="1550" sources_id="23711"/>
+
+ <PolytomousKey_RightsInfo PolytomousKey_id="1550" rights_id="10"/>
+
+ <KeyStatement_LanguageString KeyStatement_id="2460" label_id="13782" label_mapkey_id="124"/>
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+ <KeyStatement_LanguageString KeyStatement_id="2466" label_id="13792" label_mapkey_id="124"/>
+ <KeyStatement_LanguageString KeyStatement_id="2467" label_id="13796" label_mapkey_id="124"/>
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+ <KeyStatement_LanguageString KeyStatement_id="2761" label_id="14571" label_mapkey_id="124"/>
+
+ <PolytomousKey id="751" created="2013-03-24 11:17:08.0" uuid="9d8bf4f6-a70a-4b80-8556-2ccfb436ff01" protectedtitlecache="true" titleCache="Asphodeline" startNumber="1"/>
+ <PolytomousKey id="1550" created="2014-03-10 10:02:35.0" uuid="0d53ba20-7de4-4baa-bd8a-401048447d66" updated="2014-03-10 10:02:42.0" protectedtitlecache="true" titleCache="Achillea" root_id="2750" startNumber="1"/>
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+ <OriginalSourceBase DTYPE="IdentifiableSource" id="23710" created="2014-03-10 10:06:57.0" uuid="95e05e82-499d-4b8a-ad6b-1085f74a7496" updated="2014-03-10 10:07:33.0" sourcedObj_type="eu.etaxonomy.cdm.model.description.PolytomousKey" sourcedObj_id="1550" sourceType="PTS"/>
+ <OriginalSourceBase DTYPE="IdentifiableSource" id="23711" created="2014-03-10 10:06:48.0" uuid="f77555fe-0d98-4c9f-98ed-a5bca6b1e342" updated="2014-03-10 10:07:33.0" sourcedObj_type="eu.etaxonomy.cdm.model.description.PolytomousKey" sourcedObj_id="1550" sourceType="PTS"/>
+
+</dataset>
--- /dev/null
+<?xml version="1.0" encoding="UTF-8"?><!--
+ generated by Jailer 4.3, Thu Oct 09 18:00:09 CEST 2014 from cmathew@cmbgbm-t530
+
+ Extraction Model: PolytomousKey where uuid like '0d53ba20-7de4-4baa-bd8a-401048447d66' (extractionmodel/by-example/SbE-PolytomousKey-17-59-56-907.csv)
+ Database URL: jdbc:mysql://127.0.0.1:3306/local-cyprus
+ Database User: root
+
+ Exported Rows: 79
+ AgentBase 1
+ Credit 1
+ Extension 1
+ KeyStatement 10
+ KeyStatement_LanguageString 10
+ LanguageString 19
+ OriginalSourceBase 2
+ PolytomousKey 2
+ PolytomousKeyNode 10
+ PolytomousKeyNode_LanguageString 9
+ PolytomousKey_Credit 1
+ PolytomousKey_Extension 1
+ PolytomousKey_OriginalSourceBase 2
+ PolytomousKey_RightsInfo 1
+ PolytomousKey_Taxon 1
+ RightsInfo 1
+ TaxonBase 6
+
+--><dataset>
+ <PolytomousKey_Extension PolytomousKey_id="1550" extensions_id="10"/>
+
+ <PolytomousKey_Credit PolytomousKey_id="1550" credits_id="20" sortIndex="0"/>
+
+ <PolytomousKeyNode_LanguageString PolytomousKeyNode_id="2751" modifyingtext_id="13780" modifyingtext_mapkey_id="124"/>
+ <PolytomousKeyNode_LanguageString PolytomousKeyNode_id="2752" modifyingtext_id="13781" modifyingtext_mapkey_id="124"/>
+ <PolytomousKeyNode_LanguageString PolytomousKeyNode_id="2753" modifyingtext_id="13795" modifyingtext_mapkey_id="124"/>
+ <PolytomousKeyNode_LanguageString PolytomousKeyNode_id="2754" modifyingtext_id="13788" modifyingtext_mapkey_id="124"/>
+ <PolytomousKeyNode_LanguageString PolytomousKeyNode_id="2755" modifyingtext_id="13785" modifyingtext_mapkey_id="124"/>
+ <PolytomousKeyNode_LanguageString PolytomousKeyNode_id="2756" modifyingtext_id="13787" modifyingtext_mapkey_id="124"/>
+ <PolytomousKeyNode_LanguageString PolytomousKeyNode_id="2757" modifyingtext_id="13794" modifyingtext_mapkey_id="124"/>
+ <PolytomousKeyNode_LanguageString PolytomousKeyNode_id="2758" modifyingtext_id="13791" modifyingtext_mapkey_id="124"/>
+ <PolytomousKeyNode_LanguageString PolytomousKeyNode_id="2759" modifyingtext_id="13793" modifyingtext_mapkey_id="124"/>
+
+ <LanguageString id="13780" created="2014-03-10 10:03:09.0" uuid="cceaa60b-61f4-4c8a-bb0e-d45f0fa3e2dc" text="Modifying Text 1a" language_id="124"/>
+ <LanguageString id="13781" created="2014-03-10 10:03:17.0" uuid="01a0ace4-de49-4725-9909-e881fb13035d" text="" language_id="124"/>
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+ <LanguageString id="13783" created="2014-03-10 10:04:03.0" uuid="82f8a3a0-567f-4d89-ba10-3f3699111d55" updated="2014-03-10 10:06:32.0" text="Ray-florets yellow" language_id="124"/>
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+
+ <TaxonBase DTYPE="Taxon" id="32" created="2011-03-01 20:11:26.0" uuid="8217ef77-2ab1-4318-bd67-ccd0cdef07c4" protectedtitlecache="false" titleCache="Achillea arabica Kotschy sec. Cyprus" doubtful="false" usenamecache="false" excluded="false" taxonstatusunknown="false" taxonomicchildrencount="0" unplaced="false" createdby_id="11" sec_id="10" publish="true"/>
+ <TaxonBase DTYPE="Taxon" id="35" created="2010-12-21 15:09:43.0" uuid="fade44fd-34b2-455f-861a-d1372b866f06" protectedtitlecache="false" titleCache="Achillea sec. Cyprus" doubtful="false" usenamecache="false" excluded="false" taxonstatusunknown="false" taxonomicchildrencount="0" unplaced="false" createdby_id="11" sec_id="10" publish="true"/>
+ <TaxonBase DTYPE="Taxon" id="36" created="2011-03-01 20:11:26.0" uuid="05f0a2e1-e3c3-4e74-8fec-8a0ae89236c3" protectedtitlecache="false" titleCache="Achillea cretica L. sec. Cyprus" doubtful="false" usenamecache="false" excluded="false" taxonstatusunknown="false" taxonomicchildrencount="0" unplaced="false" createdby_id="11" sec_id="10" publish="true"/>
+ <TaxonBase DTYPE="Taxon" id="37" created="2011-03-01 20:11:26.0" uuid="0f8d18a9-e861-48e8-bfab-83e01a379bc0" protectedtitlecache="false" titleCache="Achillea maritima (L.)Ehrend. & Y.-P. Guo subsp. maritima sec. Cyprus" doubtful="false" usenamecache="false" excluded="false" taxonstatusunknown="false" taxonomicchildrencount="0" unplaced="false" createdby_id="11" sec_id="10" publish="true"/>
+ <TaxonBase DTYPE="Taxon" id="40" created="2010-12-21 15:09:43.0" uuid="2b336df7-29e8-4f79-985f-66502739d22f" protectedtitlecache="false" titleCache="Achillea millefolium L. sec. Cyprus" doubtful="false" usenamecache="false" excluded="false" taxonstatusunknown="false" taxonomicchildrencount="0" unplaced="false" createdby_id="11" sec_id="10" publish="true"/>
+ <TaxonBase DTYPE="Taxon" id="41" created="2011-03-01 20:11:26.0" uuid="094e1af8-efd8-4605-b037-b4f715379562" protectedtitlecache="false" titleCache="Achillea santolinoides subsp. wilhelmsii (K. Koch) Greuter sec. Cyprus" doubtful="false" usenamecache="false" excluded="false" taxonstatusunknown="false" taxonomicchildrencount="0" unplaced="false" createdby_id="11" sec_id="10" publish="true"/>
+
+ <PolytomousKey_Taxon polytomousKey_id="1550" taxon_id="35"/>
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+ <RightsInfo id="10" created="2014-10-09 15:45:53.0" uuid="bdfb572b-be25-45e7-9349-22a9da43531f" updated="2014-10-09 15:48:01.0" text="Rights Text Test" createdby_id="10" updatedby_id="10" agent_id="4809" type_id="2056"/>
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+ <PolytomousKeyNode id="2750" created="2014-03-10 10:02:35.0" uuid="75e4c924-ff58-4ee7-a59d-fd9173517d08" updated="2014-03-10 10:02:42.0" nodenumber="1" key_id="1550" question_id="2760"/>
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+ <PolytomousKeyNode id="2756" created="2014-03-10 10:04:34.0" uuid="a10e1e61-82c0-470e-a245-10a927b80c9a" updated="2014-03-10 10:06:32.0" sortindex="1" key_id="1550" statement_id="2463" taxon_id="41" parent_id="2754"/>
+ <PolytomousKeyNode id="2757" created="2014-03-10 10:05:07.0" uuid="19f7a6a2-4c55-49cb-8b92-d68a9fd9074c" updated="2014-03-10 10:06:32.0" nodenumber="4" sortindex="1" key_id="1550" statement_id="2464" parent_id="2753"/>
+ <PolytomousKeyNode id="2758" created="2014-03-10 10:05:20.0" uuid="0a4d86d1-fba5-4088-8dcc-6f0e7268ca5b" updated="2014-03-10 10:06:32.0" sortindex="0" key_id="1550" statement_id="2465" taxon_id="40" parent_id="2757"/>
+ <PolytomousKeyNode id="2759" created="2014-03-10 10:06:03.0" uuid="827c9df4-ac15-4163-95ab-616d51f62803" updated="2014-03-10 10:06:32.0" sortindex="1" key_id="1550" statement_id="2466" taxon_id="36" parent_id="2757"/>
+
+ <Credit id="20" created="2014-10-09 15:45:22.0" uuid="aa412b15-ee6c-4834-b14e-a66969cb398d" updated="2014-10-09 15:48:01.0" text="Credits Text Test" createdby_id="10" updatedby_id="10" language_id="124" agent_id="4809"/>
+
+ <KeyStatement id="2460" created="2014-03-10 10:03:48.0" uuid="66da6df7-784c-4d5a-9378-58b2cf92ba13" updated="2014-03-10 10:06:32.0" />
+ <KeyStatement id="2461" created="2014-03-10 10:04:03.0" uuid="f9cfd498-de47-48fd-b38c-43cf57b63750" updated="2014-03-10 10:06:32.0" />
+ <KeyStatement id="2462" created="2014-03-10 10:04:21.0" uuid="817fb39e-91d4-4d8c-a942-6acab47575d1" updated="2014-03-10 10:06:32.0" />
+ <KeyStatement id="2463" created="2014-03-10 10:04:53.0" uuid="6b571b86-7764-4f27-925c-ae5e2653f7ad" updated="2014-03-10 10:06:32.0" />
+ <KeyStatement id="2464" created="2014-03-10 10:05:16.0" uuid="91bbb534-abdf-4915-9f6f-a0cb41f8cf58" updated="2014-03-10 10:06:32.0" />
+ <KeyStatement id="2465" created="2014-03-10 10:05:34.0" uuid="1991ca31-2630-4917-8db3-eb67cec8f231" updated="2014-03-10 10:06:32.0" />
+ <KeyStatement id="2466" created="2014-03-10 10:06:15.0" uuid="3e1bbc59-b098-4533-ac35-245e1140a0ae" updated="2014-03-10 10:06:32.0" />
+ <KeyStatement id="2467" created="2014-03-10 10:03:24.0" uuid="68fd99f6-64ce-4bb8-a6af-d2cf2c046e2c" updated="2014-03-10 10:06:32.0" />
+ <KeyStatement id="2760" created="2014-10-09 15:42:33.0" uuid="b9702653-f620-4208-bda9-a6fe082004d1" updated="2014-10-09 15:42:44.0" createdby_id="10" updatedby_id="10"/>
+ <KeyStatement id="2761" created="2014-10-09 15:42:55.0" uuid="688a432f-4b57-4c6f-a8f6-0c468a28cb7c" updated="2014-10-09 15:43:03.0" createdby_id="10" updatedby_id="10"/>
+
+ <AgentBase DTYPE="Person" id="4809" created="2010-12-21 15:09:59.0" uuid="945d08f2-eb92-45b6-9252-6275ea6d338b" protectedtitlecache="false" titleCache="R. A. Graham" nomenclaturaltitle="R. A. Graham" createdby_id="11"/>
+
+ <Extension id="10" created="2014-10-09 15:45:41.0" uuid="0d6f35d7-7e76-446a-a017-7e8355ee1b4c" updated="2014-10-09 15:48:01.0" extendedObj_type="eu.etaxonomy.cdm.model.description.PolytomousKey" extendedObj_id="1550" value="http://test.com" createdby_id="10" updatedby_id="10" type_id="2075"/>
+
+ <PolytomousKey_OriginalSourceBase PolytomousKey_id="1550" sources_id="23710"/>
+ <PolytomousKey_OriginalSourceBase PolytomousKey_id="1550" sources_id="23711"/>
+
+ <PolytomousKey_RightsInfo PolytomousKey_id="1550" rights_id="10"/>
+
+ <KeyStatement_LanguageString KeyStatement_id="2460" label_id="13782" label_mapkey_id="124"/>
+ <KeyStatement_LanguageString KeyStatement_id="2461" label_id="13783" label_mapkey_id="124"/>
+ <KeyStatement_LanguageString KeyStatement_id="2462" label_id="13784" label_mapkey_id="124"/>
+ <KeyStatement_LanguageString KeyStatement_id="2463" label_id="13786" label_mapkey_id="124"/>
+ <KeyStatement_LanguageString KeyStatement_id="2464" label_id="13789" label_mapkey_id="124"/>
+ <KeyStatement_LanguageString KeyStatement_id="2465" label_id="13790" label_mapkey_id="124"/>
+ <KeyStatement_LanguageString KeyStatement_id="2466" label_id="13792" label_mapkey_id="124"/>
+ <KeyStatement_LanguageString KeyStatement_id="2467" label_id="13796" label_mapkey_id="124"/>
+ <KeyStatement_LanguageString KeyStatement_id="2760" label_id="14570" label_mapkey_id="124"/>
+ <KeyStatement_LanguageString KeyStatement_id="2761" label_id="14571" label_mapkey_id="124"/>
+
+ <PolytomousKey id="751" created="2013-03-24 11:17:08.0" uuid="9d8bf4f6-a70a-4b80-8556-2ccfb436ff01" protectedtitlecache="true" titleCache="Asphodeline" startNumber="1"/>
+ <PolytomousKey id="1550" created="2014-03-10 10:02:35.0" uuid="0d53ba20-7de4-4baa-bd8a-401048447d66" updated="2014-03-10 10:02:42.0" protectedtitlecache="true" titleCache="Achillea" root_id="2750" startNumber="1"/>
+
+ <OriginalSourceBase DTYPE="IdentifiableSource" id="23710" created="2014-03-10 10:06:57.0" uuid="95e05e82-499d-4b8a-ad6b-1085f74a7496" updated="2014-03-10 10:07:33.0" sourcedObj_type="eu.etaxonomy.cdm.model.description.PolytomousKey" sourcedObj_id="1550" sourceType="PTS"/>
+ <OriginalSourceBase DTYPE="IdentifiableSource" id="23711" created="2014-03-10 10:06:48.0" uuid="f77555fe-0d98-4c9f-98ed-a5bca6b1e342" updated="2014-03-10 10:07:33.0" sourcedObj_type="eu.etaxonomy.cdm.model.description.PolytomousKey" sourcedObj_id="1550" sourceType="PTS"/>
+
+
+</dataset>
--- /dev/null
+06-15 17:37:28 jdbc[2]: java.lang.Exception: Open Stack Trace
+ at org.h2.util.CloseWatcher.register(CloseWatcher.java:99)
+ at org.h2.jdbc.JdbcConnection.<init>(JdbcConnection.java:121)
+ at org.h2.jdbc.JdbcConnection.<init>(JdbcConnection.java:93)
+ at org.h2.Driver.connect(Driver.java:72)
+ at java.sql.DriverManager.getConnection(DriverManager.java:571)
+ at java.sql.DriverManager.getConnection(DriverManager.java:215)
+ at eu.etaxonomy.cdm.database.CdmDataSourceBase.getConnection(CdmDataSourceBase.java:67)
+ at eu.etaxonomy.cdm.database.CdmPersistentDataSource.getConnection(CdmPersistentDataSource.java:51)
+ at eu.etaxonomy.cdm.database.CdmDataSourceBase.getConnection(CdmDataSourceBase.java:45)
+ at eu.etaxonomy.cdm.database.CdmPersistentDataSource.getConnection(CdmPersistentDataSource.java:51)
+ at eu.etaxonomy.cdm.database.CdmDataSourceBase.executeQuery(CdmDataSourceBase.java:182)
+ at eu.etaxonomy.cdm.database.CdmPersistentDataSource.executeQuery(CdmPersistentDataSource.java:51)
+ at eu.etaxonomy.cdm.database.CdmDataSourceBase.getSingleValue(CdmDataSourceBase.java:136)
+ at eu.etaxonomy.cdm.database.CdmPersistentDataSource.getSingleValue(CdmPersistentDataSource.java:51)
+ at eu.etaxonomy.cdm.database.CdmDataSourceBase.getMetaDataMap(CdmDataSourceBase.java:288)
+ at eu.etaxonomy.cdm.database.CdmPersistentDataSource.getMetaDataMap(CdmPersistentDataSource.java:51)
+ at eu.etaxonomy.taxeditor.view.datasource.CdmMetaDataAwareDataSourceContainer.getMetaDataFromDataSource(CdmMetaDataAwareDataSourceContainer.java:84)
+ at eu.etaxonomy.taxeditor.view.datasource.CdmDataSourceViewPart$DataSourceJob.run(CdmDataSourceViewPart.java:140)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+
+org.h2.message.DbException: The connection was not closed by the application and is garbage collected [90018-170]
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.message.DbException.get(DbException.java:135)
+ at org.h2.jdbc.JdbcConnection.closeOld(JdbcConnection.java:175)
+ at org.h2.jdbc.JdbcConnection.<init>(JdbcConnection.java:120)
+ at org.h2.jdbc.JdbcConnection.<init>(JdbcConnection.java:93)
+ at org.h2.Driver.connect(Driver.java:72)
+ at java.sql.DriverManager.getConnection(DriverManager.java:571)
+ at java.sql.DriverManager.getConnection(DriverManager.java:215)
+ at eu.etaxonomy.cdm.database.CdmDataSourceBase.testConnection(CdmDataSourceBase.java:93)
+ at eu.etaxonomy.cdm.database.CdmDataSource.testConnection(CdmDataSource.java:33)
+ at eu.etaxonomy.taxeditor.datasource.wizard.CdmDataSourceCredentialsWizardPage.testDbConfiguration(CdmDataSourceCredentialsWizardPage.java:292)
+ at eu.etaxonomy.taxeditor.datasource.wizard.CdmDataSourceCredentialsWizardPage.testDbConfiguration(CdmDataSourceCredentialsWizardPage.java:281)
+ at eu.etaxonomy.taxeditor.datasource.wizard.CdmDataSourceCredentialsWizardPage$1.widgetSelected(CdmDataSourceCredentialsWizardPage.java:165)
+ at org.eclipse.swt.widgets.TypedListener.handleEvent(TypedListener.java:240)
+ at org.eclipse.swt.widgets.EventTable.sendEvent(EventTable.java:84)
+ at org.eclipse.swt.widgets.Widget.sendEvent(Widget.java:1258)
+ at org.eclipse.swt.widgets.Display.runDeferredEvents(Display.java:3588)
+ at org.eclipse.swt.widgets.Display.readAndDispatch(Display.java:3209)
+ at org.eclipse.jface.window.Window.runEventLoop(Window.java:825)
+ at org.eclipse.jface.window.Window.open(Window.java:801)
+ at eu.etaxonomy.taxeditor.view.datasource.handler.CreateDataSourceHandler.specificExecute(CreateDataSourceHandler.java:41)
+ at eu.etaxonomy.taxeditor.view.datasource.handler.AbstractDataSourceHandler.execute(AbstractDataSourceHandler.java:37)
+ at eu.etaxonomy.taxeditor.view.datasource.handler.CreateDataSourceHandler.execute(CreateDataSourceHandler.java:1)
+ at org.eclipse.ui.internal.handlers.HandlerProxy.execute(HandlerProxy.java:293)
+ at org.eclipse.core.commands.Command.executeWithChecks(Command.java:476)
+ at org.eclipse.core.commands.ParameterizedCommand.executeWithChecks(ParameterizedCommand.java:508)
+ at org.eclipse.ui.internal.handlers.HandlerService.executeCommand(HandlerService.java:169)
+ at org.eclipse.ui.internal.handlers.SlaveHandlerService.executeCommand(SlaveHandlerService.java:241)
+ at org.eclipse.ui.internal.handlers.SlaveHandlerService.executeCommand(SlaveHandlerService.java:241)
+ at org.eclipse.ui.menus.CommandContributionItem.handleWidgetSelection(CommandContributionItem.java:829)
+ at org.eclipse.ui.menus.CommandContributionItem.access$19(CommandContributionItem.java:815)
+ at org.eclipse.ui.menus.CommandContributionItem$5.handleEvent(CommandContributionItem.java:805)
+ at org.eclipse.swt.widgets.EventTable.sendEvent(EventTable.java:84)
+ at org.eclipse.swt.widgets.Widget.sendEvent(Widget.java:1258)
+ at org.eclipse.swt.widgets.Display.runDeferredEvents(Display.java:3588)
+ at org.eclipse.swt.widgets.Display.readAndDispatch(Display.java:3209)
+ at org.eclipse.ui.internal.Workbench.runEventLoop(Workbench.java:2701)
+ at org.eclipse.ui.internal.Workbench.runUI(Workbench.java:2665)
+ at org.eclipse.ui.internal.Workbench.access$4(Workbench.java:2499)
+ at org.eclipse.ui.internal.Workbench$7.run(Workbench.java:679)
+ at org.eclipse.core.databinding.observable.Realm.runWithDefault(Realm.java:332)
+ at org.eclipse.ui.internal.Workbench.createAndRunWorkbench(Workbench.java:668)
+ at org.eclipse.ui.PlatformUI.createAndRunWorkbench(PlatformUI.java:149)
+ at eu.etaxonomy.taxeditor.Application.start(Application.java:24)
+ at org.eclipse.equinox.internal.app.EclipseAppHandle.run(EclipseAppHandle.java:196)
+ at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.runApplication(EclipseAppLauncher.java:110)
+ at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.start(EclipseAppLauncher.java:79)
+ at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:344)
+ at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:179)
+ at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
+ at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
+ at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
+ at java.lang.reflect.Method.invoke(Method.java:606)
+ at org.eclipse.equinox.launcher.Main.invokeFramework(Main.java:622)
+ at org.eclipse.equinox.launcher.Main.basicRun(Main.java:577)
+ at org.eclipse.equinox.launcher.Main.run(Main.java:1410)
+ at org.eclipse.equinox.launcher.Main.main(Main.java:1386)
+Caused by: org.h2.jdbc.JdbcSQLException: The connection was not closed by the application and is garbage collected [90018-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ ... 58 more
+06-15 17:37:28 jdbc[2]: java.lang.Exception: Open Stack Trace
+ at org.h2.util.CloseWatcher.register(CloseWatcher.java:99)
+ at org.h2.jdbc.JdbcConnection.<init>(JdbcConnection.java:121)
+ at org.h2.jdbc.JdbcConnection.<init>(JdbcConnection.java:93)
+ at org.h2.Driver.connect(Driver.java:72)
+ at java.sql.DriverManager.getConnection(DriverManager.java:571)
+ at java.sql.DriverManager.getConnection(DriverManager.java:215)
+ at eu.etaxonomy.cdm.database.CdmDataSourceBase.getConnection(CdmDataSourceBase.java:67)
+ at eu.etaxonomy.cdm.database.CdmPersistentDataSource.getConnection(CdmPersistentDataSource.java:51)
+ at eu.etaxonomy.cdm.database.CdmDataSourceBase.getConnection(CdmDataSourceBase.java:45)
+ at eu.etaxonomy.cdm.database.CdmPersistentDataSource.getConnection(CdmPersistentDataSource.java:51)
+ at eu.etaxonomy.cdm.database.CdmDataSourceBase.executeQuery(CdmDataSourceBase.java:182)
+ at eu.etaxonomy.cdm.database.CdmPersistentDataSource.executeQuery(CdmPersistentDataSource.java:51)
+ at eu.etaxonomy.cdm.database.CdmDataSourceBase.getSingleValue(CdmDataSourceBase.java:136)
+ at eu.etaxonomy.cdm.database.CdmPersistentDataSource.getSingleValue(CdmPersistentDataSource.java:51)
+ at eu.etaxonomy.cdm.database.CdmDataSourceBase.getMetaDataMap(CdmDataSourceBase.java:288)
+ at eu.etaxonomy.cdm.database.CdmPersistentDataSource.getMetaDataMap(CdmPersistentDataSource.java:51)
+ at eu.etaxonomy.taxeditor.view.datasource.CdmMetaDataAwareDataSourceContainer.getMetaDataFromDataSource(CdmMetaDataAwareDataSourceContainer.java:84)
+ at eu.etaxonomy.taxeditor.view.datasource.CdmDataSourceViewPart$DataSourceJob.run(CdmDataSourceViewPart.java:140)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+
+org.h2.message.DbException: The connection was not closed by the application and is garbage collected [90018-170]
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.message.DbException.get(DbException.java:135)
+ at org.h2.jdbc.JdbcConnection.closeOld(JdbcConnection.java:175)
+ at org.h2.jdbc.JdbcConnection.<init>(JdbcConnection.java:120)
+ at org.h2.jdbc.JdbcConnection.<init>(JdbcConnection.java:93)
+ at org.h2.Driver.connect(Driver.java:72)
+ at java.sql.DriverManager.getConnection(DriverManager.java:571)
+ at java.sql.DriverManager.getConnection(DriverManager.java:215)
+ at eu.etaxonomy.cdm.database.CdmDataSourceBase.testConnection(CdmDataSourceBase.java:93)
+ at eu.etaxonomy.cdm.database.CdmDataSource.testConnection(CdmDataSource.java:33)
+ at eu.etaxonomy.taxeditor.datasource.wizard.CdmDataSourceCredentialsWizardPage.testDbConfiguration(CdmDataSourceCredentialsWizardPage.java:292)
+ at eu.etaxonomy.taxeditor.datasource.wizard.CdmDataSourceCredentialsWizardPage.testDbConfiguration(CdmDataSourceCredentialsWizardPage.java:281)
+ at eu.etaxonomy.taxeditor.datasource.wizard.CdmDataSourceCredentialsWizardPage$1.widgetSelected(CdmDataSourceCredentialsWizardPage.java:165)
+ at org.eclipse.swt.widgets.TypedListener.handleEvent(TypedListener.java:240)
+ at org.eclipse.swt.widgets.EventTable.sendEvent(EventTable.java:84)
+ at org.eclipse.swt.widgets.Widget.sendEvent(Widget.java:1258)
+ at org.eclipse.swt.widgets.Display.runDeferredEvents(Display.java:3588)
+ at org.eclipse.swt.widgets.Display.readAndDispatch(Display.java:3209)
+ at org.eclipse.jface.window.Window.runEventLoop(Window.java:825)
+ at org.eclipse.jface.window.Window.open(Window.java:801)
+ at eu.etaxonomy.taxeditor.view.datasource.handler.CreateDataSourceHandler.specificExecute(CreateDataSourceHandler.java:41)
+ at eu.etaxonomy.taxeditor.view.datasource.handler.AbstractDataSourceHandler.execute(AbstractDataSourceHandler.java:37)
+ at eu.etaxonomy.taxeditor.view.datasource.handler.CreateDataSourceHandler.execute(CreateDataSourceHandler.java:1)
+ at org.eclipse.ui.internal.handlers.HandlerProxy.execute(HandlerProxy.java:293)
+ at org.eclipse.core.commands.Command.executeWithChecks(Command.java:476)
+ at org.eclipse.core.commands.ParameterizedCommand.executeWithChecks(ParameterizedCommand.java:508)
+ at org.eclipse.ui.internal.handlers.HandlerService.executeCommand(HandlerService.java:169)
+ at org.eclipse.ui.internal.handlers.SlaveHandlerService.executeCommand(SlaveHandlerService.java:241)
+ at org.eclipse.ui.internal.handlers.SlaveHandlerService.executeCommand(SlaveHandlerService.java:241)
+ at org.eclipse.ui.menus.CommandContributionItem.handleWidgetSelection(CommandContributionItem.java:829)
+ at org.eclipse.ui.menus.CommandContributionItem.access$19(CommandContributionItem.java:815)
+ at org.eclipse.ui.menus.CommandContributionItem$5.handleEvent(CommandContributionItem.java:805)
+ at org.eclipse.swt.widgets.EventTable.sendEvent(EventTable.java:84)
+ at org.eclipse.swt.widgets.Widget.sendEvent(Widget.java:1258)
+ at org.eclipse.swt.widgets.Display.runDeferredEvents(Display.java:3588)
+ at org.eclipse.swt.widgets.Display.readAndDispatch(Display.java:3209)
+ at org.eclipse.ui.internal.Workbench.runEventLoop(Workbench.java:2701)
+ at org.eclipse.ui.internal.Workbench.runUI(Workbench.java:2665)
+ at org.eclipse.ui.internal.Workbench.access$4(Workbench.java:2499)
+ at org.eclipse.ui.internal.Workbench$7.run(Workbench.java:679)
+ at org.eclipse.core.databinding.observable.Realm.runWithDefault(Realm.java:332)
+ at org.eclipse.ui.internal.Workbench.createAndRunWorkbench(Workbench.java:668)
+ at org.eclipse.ui.PlatformUI.createAndRunWorkbench(PlatformUI.java:149)
+ at eu.etaxonomy.taxeditor.Application.start(Application.java:24)
+ at org.eclipse.equinox.internal.app.EclipseAppHandle.run(EclipseAppHandle.java:196)
+ at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.runApplication(EclipseAppLauncher.java:110)
+ at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.start(EclipseAppLauncher.java:79)
+ at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:344)
+ at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:179)
+ at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
+ at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
+ at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
+ at java.lang.reflect.Method.invoke(Method.java:606)
+ at org.eclipse.equinox.launcher.Main.invokeFramework(Main.java:622)
+ at org.eclipse.equinox.launcher.Main.basicRun(Main.java:577)
+ at org.eclipse.equinox.launcher.Main.run(Main.java:1410)
+ at org.eclipse.equinox.launcher.Main.main(Main.java:1386)
+Caused by: org.h2.jdbc.JdbcSQLException: The connection was not closed by the application and is garbage collected [90018-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ ... 58 more
+06-15 17:37:28 jdbc[2]: java.lang.Exception: Open Stack Trace
+ at org.h2.util.CloseWatcher.register(CloseWatcher.java:99)
+ at org.h2.jdbc.JdbcConnection.<init>(JdbcConnection.java:121)
+ at org.h2.jdbc.JdbcConnection.<init>(JdbcConnection.java:93)
+ at org.h2.Driver.connect(Driver.java:72)
+ at java.sql.DriverManager.getConnection(DriverManager.java:571)
+ at java.sql.DriverManager.getConnection(DriverManager.java:215)
+ at eu.etaxonomy.cdm.database.CdmDataSourceBase.getConnection(CdmDataSourceBase.java:67)
+ at eu.etaxonomy.cdm.database.CdmPersistentDataSource.getConnection(CdmPersistentDataSource.java:51)
+ at eu.etaxonomy.cdm.database.CdmDataSourceBase.getConnection(CdmDataSourceBase.java:45)
+ at eu.etaxonomy.cdm.database.CdmPersistentDataSource.getConnection(CdmPersistentDataSource.java:51)
+ at eu.etaxonomy.cdm.database.CdmDataSourceBase.executeQuery(CdmDataSourceBase.java:182)
+ at eu.etaxonomy.cdm.database.CdmPersistentDataSource.executeQuery(CdmPersistentDataSource.java:51)
+ at eu.etaxonomy.cdm.database.CdmDataSourceBase.getSingleValue(CdmDataSourceBase.java:136)
+ at eu.etaxonomy.cdm.database.CdmPersistentDataSource.getSingleValue(CdmPersistentDataSource.java:51)
+ at eu.etaxonomy.cdm.database.CdmDataSourceBase.getMetaDataMap(CdmDataSourceBase.java:288)
+ at eu.etaxonomy.cdm.database.CdmPersistentDataSource.getMetaDataMap(CdmPersistentDataSource.java:51)
+ at eu.etaxonomy.taxeditor.view.datasource.CdmMetaDataAwareDataSourceContainer.getMetaDataFromDataSource(CdmMetaDataAwareDataSourceContainer.java:84)
+ at eu.etaxonomy.taxeditor.view.datasource.CdmDataSourceViewPart$DataSourceJob.run(CdmDataSourceViewPart.java:140)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+
+org.h2.message.DbException: The connection was not closed by the application and is garbage collected [90018-170]
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.message.DbException.get(DbException.java:135)
+ at org.h2.jdbc.JdbcConnection.closeOld(JdbcConnection.java:175)
+ at org.h2.jdbc.JdbcConnection.<init>(JdbcConnection.java:120)
+ at org.h2.jdbc.JdbcConnection.<init>(JdbcConnection.java:93)
+ at org.h2.Driver.connect(Driver.java:72)
+ at java.sql.DriverManager.getConnection(DriverManager.java:571)
+ at java.sql.DriverManager.getConnection(DriverManager.java:215)
+ at eu.etaxonomy.cdm.database.CdmDataSourceBase.testConnection(CdmDataSourceBase.java:93)
+ at eu.etaxonomy.cdm.database.CdmDataSource.testConnection(CdmDataSource.java:33)
+ at eu.etaxonomy.taxeditor.datasource.wizard.CdmDataSourceCredentialsWizardPage.testDbConfiguration(CdmDataSourceCredentialsWizardPage.java:292)
+ at eu.etaxonomy.taxeditor.datasource.wizard.CdmDataSourceCredentialsWizardPage.testDbConfiguration(CdmDataSourceCredentialsWizardPage.java:281)
+ at eu.etaxonomy.taxeditor.datasource.wizard.CdmDataSourceCredentialsWizardPage$1.widgetSelected(CdmDataSourceCredentialsWizardPage.java:165)
+ at org.eclipse.swt.widgets.TypedListener.handleEvent(TypedListener.java:240)
+ at org.eclipse.swt.widgets.EventTable.sendEvent(EventTable.java:84)
+ at org.eclipse.swt.widgets.Widget.sendEvent(Widget.java:1258)
+ at org.eclipse.swt.widgets.Display.runDeferredEvents(Display.java:3588)
+ at org.eclipse.swt.widgets.Display.readAndDispatch(Display.java:3209)
+ at org.eclipse.jface.window.Window.runEventLoop(Window.java:825)
+ at org.eclipse.jface.window.Window.open(Window.java:801)
+ at eu.etaxonomy.taxeditor.view.datasource.handler.CreateDataSourceHandler.specificExecute(CreateDataSourceHandler.java:41)
+ at eu.etaxonomy.taxeditor.view.datasource.handler.AbstractDataSourceHandler.execute(AbstractDataSourceHandler.java:37)
+ at eu.etaxonomy.taxeditor.view.datasource.handler.CreateDataSourceHandler.execute(CreateDataSourceHandler.java:1)
+ at org.eclipse.ui.internal.handlers.HandlerProxy.execute(HandlerProxy.java:293)
+ at org.eclipse.core.commands.Command.executeWithChecks(Command.java:476)
+ at org.eclipse.core.commands.ParameterizedCommand.executeWithChecks(ParameterizedCommand.java:508)
+ at org.eclipse.ui.internal.handlers.HandlerService.executeCommand(HandlerService.java:169)
+ at org.eclipse.ui.internal.handlers.SlaveHandlerService.executeCommand(SlaveHandlerService.java:241)
+ at org.eclipse.ui.internal.handlers.SlaveHandlerService.executeCommand(SlaveHandlerService.java:241)
+ at org.eclipse.ui.menus.CommandContributionItem.handleWidgetSelection(CommandContributionItem.java:829)
+ at org.eclipse.ui.menus.CommandContributionItem.access$19(CommandContributionItem.java:815)
+ at org.eclipse.ui.menus.CommandContributionItem$5.handleEvent(CommandContributionItem.java:805)
+ at org.eclipse.swt.widgets.EventTable.sendEvent(EventTable.java:84)
+ at org.eclipse.swt.widgets.Widget.sendEvent(Widget.java:1258)
+ at org.eclipse.swt.widgets.Display.runDeferredEvents(Display.java:3588)
+ at org.eclipse.swt.widgets.Display.readAndDispatch(Display.java:3209)
+ at org.eclipse.ui.internal.Workbench.runEventLoop(Workbench.java:2701)
+ at org.eclipse.ui.internal.Workbench.runUI(Workbench.java:2665)
+ at org.eclipse.ui.internal.Workbench.access$4(Workbench.java:2499)
+ at org.eclipse.ui.internal.Workbench$7.run(Workbench.java:679)
+ at org.eclipse.core.databinding.observable.Realm.runWithDefault(Realm.java:332)
+ at org.eclipse.ui.internal.Workbench.createAndRunWorkbench(Workbench.java:668)
+ at org.eclipse.ui.PlatformUI.createAndRunWorkbench(PlatformUI.java:149)
+ at eu.etaxonomy.taxeditor.Application.start(Application.java:24)
+ at org.eclipse.equinox.internal.app.EclipseAppHandle.run(EclipseAppHandle.java:196)
+ at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.runApplication(EclipseAppLauncher.java:110)
+ at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.start(EclipseAppLauncher.java:79)
+ at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:344)
+ at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:179)
+ at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
+ at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
+ at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
+ at java.lang.reflect.Method.invoke(Method.java:606)
+ at org.eclipse.equinox.launcher.Main.invokeFramework(Main.java:622)
+ at org.eclipse.equinox.launcher.Main.basicRun(Main.java:577)
+ at org.eclipse.equinox.launcher.Main.run(Main.java:1410)
+ at org.eclipse.equinox.launcher.Main.main(Main.java:1386)
+Caused by: org.h2.jdbc.JdbcSQLException: The connection was not closed by the application and is garbage collected [90018-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ ... 58 more
+06-15 17:37:28 jdbc[2]: java.lang.Exception: Open Stack Trace
+ at org.h2.util.CloseWatcher.register(CloseWatcher.java:99)
+ at org.h2.jdbc.JdbcConnection.<init>(JdbcConnection.java:121)
+ at org.h2.jdbc.JdbcConnection.<init>(JdbcConnection.java:93)
+ at org.h2.Driver.connect(Driver.java:72)
+ at java.sql.DriverManager.getConnection(DriverManager.java:571)
+ at java.sql.DriverManager.getConnection(DriverManager.java:215)
+ at eu.etaxonomy.cdm.database.CdmDataSourceBase.testConnection(CdmDataSourceBase.java:93)
+ at eu.etaxonomy.cdm.database.CdmPersistentDataSource.testConnection(CdmPersistentDataSource.java:51)
+ at eu.etaxonomy.cdm.database.CdmDataSourceBase.checkConnection(CdmDataSourceBase.java:110)
+ at eu.etaxonomy.cdm.database.CdmPersistentDataSource.checkConnection(CdmPersistentDataSource.java:51)
+ at eu.etaxonomy.taxeditor.view.datasource.CdmMetaDataAwareDataSourceContainer.getMetaDataFromDataSource(CdmMetaDataAwareDataSourceContainer.java:72)
+ at eu.etaxonomy.taxeditor.view.datasource.CdmDataSourceViewPart$DataSourceJob.run(CdmDataSourceViewPart.java:140)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+
+org.h2.message.DbException: The connection was not closed by the application and is garbage collected [90018-170]
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.message.DbException.get(DbException.java:135)
+ at org.h2.jdbc.JdbcConnection.closeOld(JdbcConnection.java:175)
+ at org.h2.jdbc.JdbcConnection.<init>(JdbcConnection.java:120)
+ at org.h2.jdbc.JdbcConnection.<init>(JdbcConnection.java:93)
+ at org.h2.Driver.connect(Driver.java:72)
+ at java.sql.DriverManager.getConnection(DriverManager.java:571)
+ at java.sql.DriverManager.getConnection(DriverManager.java:215)
+ at eu.etaxonomy.cdm.database.CdmDataSourceBase.testConnection(CdmDataSourceBase.java:93)
+ at eu.etaxonomy.cdm.database.CdmDataSource.testConnection(CdmDataSource.java:33)
+ at eu.etaxonomy.taxeditor.datasource.wizard.CdmDataSourceCredentialsWizardPage.testDbConfiguration(CdmDataSourceCredentialsWizardPage.java:292)
+ at eu.etaxonomy.taxeditor.datasource.wizard.CdmDataSourceCredentialsWizardPage.testDbConfiguration(CdmDataSourceCredentialsWizardPage.java:281)
+ at eu.etaxonomy.taxeditor.datasource.wizard.CdmDataSourceCredentialsWizardPage$1.widgetSelected(CdmDataSourceCredentialsWizardPage.java:165)
+ at org.eclipse.swt.widgets.TypedListener.handleEvent(TypedListener.java:240)
+ at org.eclipse.swt.widgets.EventTable.sendEvent(EventTable.java:84)
+ at org.eclipse.swt.widgets.Widget.sendEvent(Widget.java:1258)
+ at org.eclipse.swt.widgets.Display.runDeferredEvents(Display.java:3588)
+ at org.eclipse.swt.widgets.Display.readAndDispatch(Display.java:3209)
+ at org.eclipse.jface.window.Window.runEventLoop(Window.java:825)
+ at org.eclipse.jface.window.Window.open(Window.java:801)
+ at eu.etaxonomy.taxeditor.view.datasource.handler.CreateDataSourceHandler.specificExecute(CreateDataSourceHandler.java:41)
+ at eu.etaxonomy.taxeditor.view.datasource.handler.AbstractDataSourceHandler.execute(AbstractDataSourceHandler.java:37)
+ at eu.etaxonomy.taxeditor.view.datasource.handler.CreateDataSourceHandler.execute(CreateDataSourceHandler.java:1)
+ at org.eclipse.ui.internal.handlers.HandlerProxy.execute(HandlerProxy.java:293)
+ at org.eclipse.core.commands.Command.executeWithChecks(Command.java:476)
+ at org.eclipse.core.commands.ParameterizedCommand.executeWithChecks(ParameterizedCommand.java:508)
+ at org.eclipse.ui.internal.handlers.HandlerService.executeCommand(HandlerService.java:169)
+ at org.eclipse.ui.internal.handlers.SlaveHandlerService.executeCommand(SlaveHandlerService.java:241)
+ at org.eclipse.ui.internal.handlers.SlaveHandlerService.executeCommand(SlaveHandlerService.java:241)
+ at org.eclipse.ui.menus.CommandContributionItem.handleWidgetSelection(CommandContributionItem.java:829)
+ at org.eclipse.ui.menus.CommandContributionItem.access$19(CommandContributionItem.java:815)
+ at org.eclipse.ui.menus.CommandContributionItem$5.handleEvent(CommandContributionItem.java:805)
+ at org.eclipse.swt.widgets.EventTable.sendEvent(EventTable.java:84)
+ at org.eclipse.swt.widgets.Widget.sendEvent(Widget.java:1258)
+ at org.eclipse.swt.widgets.Display.runDeferredEvents(Display.java:3588)
+ at org.eclipse.swt.widgets.Display.readAndDispatch(Display.java:3209)
+ at org.eclipse.ui.internal.Workbench.runEventLoop(Workbench.java:2701)
+ at org.eclipse.ui.internal.Workbench.runUI(Workbench.java:2665)
+ at org.eclipse.ui.internal.Workbench.access$4(Workbench.java:2499)
+ at org.eclipse.ui.internal.Workbench$7.run(Workbench.java:679)
+ at org.eclipse.core.databinding.observable.Realm.runWithDefault(Realm.java:332)
+ at org.eclipse.ui.internal.Workbench.createAndRunWorkbench(Workbench.java:668)
+ at org.eclipse.ui.PlatformUI.createAndRunWorkbench(PlatformUI.java:149)
+ at eu.etaxonomy.taxeditor.Application.start(Application.java:24)
+ at org.eclipse.equinox.internal.app.EclipseAppHandle.run(EclipseAppHandle.java:196)
+ at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.runApplication(EclipseAppLauncher.java:110)
+ at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.start(EclipseAppLauncher.java:79)
+ at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:344)
+ at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:179)
+ at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
+ at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
+ at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
+ at java.lang.reflect.Method.invoke(Method.java:606)
+ at org.eclipse.equinox.launcher.Main.invokeFramework(Main.java:622)
+ at org.eclipse.equinox.launcher.Main.basicRun(Main.java:577)
+ at org.eclipse.equinox.launcher.Main.run(Main.java:1410)
+ at org.eclipse.equinox.launcher.Main.main(Main.java:1386)
+Caused by: org.h2.jdbc.JdbcSQLException: The connection was not closed by the application and is garbage collected [90018-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ ... 58 more
+06-15 17:37:28 jdbc[2]: java.lang.Exception: Open Stack Trace
+ at org.h2.util.CloseWatcher.register(CloseWatcher.java:99)
+ at org.h2.jdbc.JdbcConnection.<init>(JdbcConnection.java:121)
+ at org.h2.jdbc.JdbcConnection.<init>(JdbcConnection.java:93)
+ at org.h2.Driver.connect(Driver.java:72)
+ at java.sql.DriverManager.getConnection(DriverManager.java:571)
+ at java.sql.DriverManager.getConnection(DriverManager.java:215)
+ at eu.etaxonomy.cdm.database.CdmDataSourceBase.getConnection(CdmDataSourceBase.java:67)
+ at eu.etaxonomy.cdm.database.CdmPersistentDataSource.getConnection(CdmPersistentDataSource.java:51)
+ at eu.etaxonomy.cdm.database.CdmDataSourceBase.getConnection(CdmDataSourceBase.java:45)
+ at eu.etaxonomy.cdm.database.CdmPersistentDataSource.getConnection(CdmPersistentDataSource.java:51)
+ at eu.etaxonomy.cdm.database.CdmDataSourceBase.executeQuery(CdmDataSourceBase.java:182)
+ at eu.etaxonomy.cdm.database.CdmPersistentDataSource.executeQuery(CdmPersistentDataSource.java:51)
+ at eu.etaxonomy.cdm.database.CdmDataSourceBase.getSingleValue(CdmDataSourceBase.java:136)
+ at eu.etaxonomy.cdm.database.CdmPersistentDataSource.getSingleValue(CdmPersistentDataSource.java:51)
+ at eu.etaxonomy.cdm.database.CdmDataSourceBase.getMetaDataMap(CdmDataSourceBase.java:288)
+ at eu.etaxonomy.cdm.database.CdmPersistentDataSource.getMetaDataMap(CdmPersistentDataSource.java:51)
+ at eu.etaxonomy.taxeditor.view.datasource.CdmMetaDataAwareDataSourceContainer.getMetaDataFromDataSource(CdmMetaDataAwareDataSourceContainer.java:84)
+ at eu.etaxonomy.taxeditor.view.datasource.CdmDataSourceViewPart$DataSourceJob.run(CdmDataSourceViewPart.java:140)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+
+org.h2.message.DbException: The connection was not closed by the application and is garbage collected [90018-170]
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.message.DbException.get(DbException.java:135)
+ at org.h2.jdbc.JdbcConnection.closeOld(JdbcConnection.java:175)
+ at org.h2.jdbc.JdbcConnection.<init>(JdbcConnection.java:120)
+ at org.h2.jdbc.JdbcConnection.<init>(JdbcConnection.java:93)
+ at org.h2.Driver.connect(Driver.java:72)
+ at java.sql.DriverManager.getConnection(DriverManager.java:571)
+ at java.sql.DriverManager.getConnection(DriverManager.java:215)
+ at eu.etaxonomy.cdm.database.CdmDataSourceBase.testConnection(CdmDataSourceBase.java:93)
+ at eu.etaxonomy.cdm.database.CdmDataSource.testConnection(CdmDataSource.java:33)
+ at eu.etaxonomy.taxeditor.datasource.wizard.CdmDataSourceCredentialsWizardPage.testDbConfiguration(CdmDataSourceCredentialsWizardPage.java:292)
+ at eu.etaxonomy.taxeditor.datasource.wizard.CdmDataSourceCredentialsWizardPage.testDbConfiguration(CdmDataSourceCredentialsWizardPage.java:281)
+ at eu.etaxonomy.taxeditor.datasource.wizard.CdmDataSourceCredentialsWizardPage$1.widgetSelected(CdmDataSourceCredentialsWizardPage.java:165)
+ at org.eclipse.swt.widgets.TypedListener.handleEvent(TypedListener.java:240)
+ at org.eclipse.swt.widgets.EventTable.sendEvent(EventTable.java:84)
+ at org.eclipse.swt.widgets.Widget.sendEvent(Widget.java:1258)
+ at org.eclipse.swt.widgets.Display.runDeferredEvents(Display.java:3588)
+ at org.eclipse.swt.widgets.Display.readAndDispatch(Display.java:3209)
+ at org.eclipse.jface.window.Window.runEventLoop(Window.java:825)
+ at org.eclipse.jface.window.Window.open(Window.java:801)
+ at eu.etaxonomy.taxeditor.view.datasource.handler.CreateDataSourceHandler.specificExecute(CreateDataSourceHandler.java:41)
+ at eu.etaxonomy.taxeditor.view.datasource.handler.AbstractDataSourceHandler.execute(AbstractDataSourceHandler.java:37)
+ at eu.etaxonomy.taxeditor.view.datasource.handler.CreateDataSourceHandler.execute(CreateDataSourceHandler.java:1)
+ at org.eclipse.ui.internal.handlers.HandlerProxy.execute(HandlerProxy.java:293)
+ at org.eclipse.core.commands.Command.executeWithChecks(Command.java:476)
+ at org.eclipse.core.commands.ParameterizedCommand.executeWithChecks(ParameterizedCommand.java:508)
+ at org.eclipse.ui.internal.handlers.HandlerService.executeCommand(HandlerService.java:169)
+ at org.eclipse.ui.internal.handlers.SlaveHandlerService.executeCommand(SlaveHandlerService.java:241)
+ at org.eclipse.ui.internal.handlers.SlaveHandlerService.executeCommand(SlaveHandlerService.java:241)
+ at org.eclipse.ui.menus.CommandContributionItem.handleWidgetSelection(CommandContributionItem.java:829)
+ at org.eclipse.ui.menus.CommandContributionItem.access$19(CommandContributionItem.java:815)
+ at org.eclipse.ui.menus.CommandContributionItem$5.handleEvent(CommandContributionItem.java:805)
+ at org.eclipse.swt.widgets.EventTable.sendEvent(EventTable.java:84)
+ at org.eclipse.swt.widgets.Widget.sendEvent(Widget.java:1258)
+ at org.eclipse.swt.widgets.Display.runDeferredEvents(Display.java:3588)
+ at org.eclipse.swt.widgets.Display.readAndDispatch(Display.java:3209)
+ at org.eclipse.ui.internal.Workbench.runEventLoop(Workbench.java:2701)
+ at org.eclipse.ui.internal.Workbench.runUI(Workbench.java:2665)
+ at org.eclipse.ui.internal.Workbench.access$4(Workbench.java:2499)
+ at org.eclipse.ui.internal.Workbench$7.run(Workbench.java:679)
+ at org.eclipse.core.databinding.observable.Realm.runWithDefault(Realm.java:332)
+ at org.eclipse.ui.internal.Workbench.createAndRunWorkbench(Workbench.java:668)
+ at org.eclipse.ui.PlatformUI.createAndRunWorkbench(PlatformUI.java:149)
+ at eu.etaxonomy.taxeditor.Application.start(Application.java:24)
+ at org.eclipse.equinox.internal.app.EclipseAppHandle.run(EclipseAppHandle.java:196)
+ at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.runApplication(EclipseAppLauncher.java:110)
+ at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.start(EclipseAppLauncher.java:79)
+ at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:344)
+ at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:179)
+ at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
+ at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
+ at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
+ at java.lang.reflect.Method.invoke(Method.java:606)
+ at org.eclipse.equinox.launcher.Main.invokeFramework(Main.java:622)
+ at org.eclipse.equinox.launcher.Main.basicRun(Main.java:577)
+ at org.eclipse.equinox.launcher.Main.run(Main.java:1410)
+ at org.eclipse.equinox.launcher.Main.main(Main.java:1386)
+Caused by: org.h2.jdbc.JdbcSQLException: The connection was not closed by the application and is garbage collected [90018-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ ... 58 more
+06-15 17:37:31 jdbc[3]: exception
+org.h2.jdbc.JdbcSQLException: Table "CDMMETADATA" not found; SQL statement:
+SELECT value FROM CdmMetaData WHERE propertyname=0 [42102-170]
+06-15 17:37:34 jdbc[6]: exception
+org.h2.jdbc.JdbcSQLException: Table "CDMMETADATA" not found; SQL statement:
+SELECT value FROM CdmMetaData WHERE propertyname=0 [42102-170]
+06-15 17:38:06 jdbc[7]: java.lang.Exception: Open Stack Trace
+ at org.h2.util.CloseWatcher.register(CloseWatcher.java:99)
+ at org.h2.jdbc.JdbcConnection.<init>(JdbcConnection.java:121)
+ at org.h2.jdbc.JdbcConnection.<init>(JdbcConnection.java:93)
+ at org.h2.Driver.connect(Driver.java:72)
+ at java.sql.DriverManager.getConnection(DriverManager.java:571)
+ at java.sql.DriverManager.getConnection(DriverManager.java:215)
+ at eu.etaxonomy.cdm.database.CdmDataSourceBase.testConnection(CdmDataSourceBase.java:93)
+ at eu.etaxonomy.cdm.database.CdmPersistentDataSource.testConnection(CdmPersistentDataSource.java:51)
+ at eu.etaxonomy.cdm.database.CdmDataSourceBase.checkConnection(CdmDataSourceBase.java:110)
+ at eu.etaxonomy.cdm.database.CdmPersistentDataSource.checkConnection(CdmPersistentDataSource.java:51)
+ at eu.etaxonomy.taxeditor.view.datasource.CdmMetaDataAwareDataSourceContainer.getMetaDataFromDataSource(CdmMetaDataAwareDataSourceContainer.java:72)
+ at eu.etaxonomy.taxeditor.view.datasource.CdmDataSourceViewPart$DataSourceJob.run(CdmDataSourceViewPart.java:140)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+
+org.h2.message.DbException: The connection was not closed by the application and is garbage collected [90018-170]
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.message.DbException.get(DbException.java:135)
+ at org.h2.jdbc.JdbcConnection.closeOld(JdbcConnection.java:175)
+ at org.h2.jdbc.JdbcConnection.<init>(JdbcConnection.java:120)
+ at org.h2.jdbc.JdbcConnection.<init>(JdbcConnection.java:93)
+ at org.h2.Driver.connect(Driver.java:72)
+ at org.apache.commons.dbcp.DriverConnectionFactory.createConnection(DriverConnectionFactory.java:38)
+ at org.apache.commons.dbcp.PoolableConnectionFactory.makeObject(PoolableConnectionFactory.java:582)
+ at org.apache.commons.dbcp.BasicDataSource.validateConnectionFactory(BasicDataSource.java:1556)
+ at org.apache.commons.dbcp.BasicDataSource.createPoolableConnectionFactory(BasicDataSource.java:1545)
+ at org.apache.commons.dbcp.BasicDataSource.createDataSource(BasicDataSource.java:1388)
+ at eu.etaxonomy.cdm.database.LocalH2.createDataSource(LocalH2.java:88)
+ at org.apache.commons.dbcp.BasicDataSource.getConnection(BasicDataSource.java:1044)
+ at org.hibernate.service.jdbc.connections.internal.DatasourceConnectionProviderImpl.getConnection(DatasourceConnectionProviderImpl.java:141)
+ at org.hibernate.engine.jdbc.internal.JdbcServicesImpl$ConnectionProviderJdbcConnectionAccess.obtainConnection(JdbcServicesImpl.java:242)
+ at org.hibernate.engine.jdbc.internal.JdbcServicesImpl.configure(JdbcServicesImpl.java:117)
+ at org.hibernate.service.internal.StandardServiceRegistryImpl.configureService(StandardServiceRegistryImpl.java:75)
+ at org.hibernate.service.internal.AbstractServiceRegistryImpl.initializeService(AbstractServiceRegistryImpl.java:159)
+ at org.hibernate.service.internal.AbstractServiceRegistryImpl.getService(AbstractServiceRegistryImpl.java:131)
+ at org.hibernate.cfg.SettingsFactory.buildSettings(SettingsFactory.java:77)
+ at org.hibernate.cfg.Configuration.buildSettingsInternal(Configuration.java:2276)
+ at org.hibernate.cfg.Configuration.buildSettings(Configuration.java:2272)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1741)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1781)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBuilder.buildSessionFactory(LocalSessionFactoryBuilder.java:247)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.buildSessionFactory(LocalSessionFactoryBean.java:373)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.afterPropertiesSet(LocalSessionFactoryBean.java:358)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1547)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1485)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:524)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:323)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:107)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1393)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1134)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:522)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:626)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.preInstantiateSingletons(MonitoredListableBeanFactory.java:71)
+ at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:932)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.finishBeanFactoryInitialization(MonitoredGenericApplicationContext.java:74)
+ at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:479)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.refresh(MonitoredGenericApplicationContext.java:102)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.setNewDataSource(CdmApplicationController.java:264)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.<init>(CdmApplicationController.java:204)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.NewInstance(CdmApplicationController.java:148)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.getApplicationController(CdmStoreConnector.java:151)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.run(CdmStoreConnector.java:99)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+Caused by: org.h2.jdbc.JdbcSQLException: The connection was not closed by the application and is garbage collected [90018-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ ... 60 more
+06-15 17:38:06 jdbc[7]: java.lang.Exception: Open Stack Trace
+ at org.h2.util.CloseWatcher.register(CloseWatcher.java:99)
+ at org.h2.jdbc.JdbcConnection.<init>(JdbcConnection.java:121)
+ at org.h2.jdbc.JdbcConnection.<init>(JdbcConnection.java:93)
+ at org.h2.Driver.connect(Driver.java:72)
+ at java.sql.DriverManager.getConnection(DriverManager.java:571)
+ at java.sql.DriverManager.getConnection(DriverManager.java:215)
+ at eu.etaxonomy.cdm.database.CdmDataSourceBase.getConnection(CdmDataSourceBase.java:67)
+ at eu.etaxonomy.cdm.database.CdmPersistentDataSource.getConnection(CdmPersistentDataSource.java:51)
+ at eu.etaxonomy.cdm.database.CdmDataSourceBase.getConnection(CdmDataSourceBase.java:45)
+ at eu.etaxonomy.cdm.database.CdmPersistentDataSource.getConnection(CdmPersistentDataSource.java:51)
+ at eu.etaxonomy.cdm.database.CdmDataSourceBase.executeQuery(CdmDataSourceBase.java:182)
+ at eu.etaxonomy.cdm.database.CdmPersistentDataSource.executeQuery(CdmPersistentDataSource.java:51)
+ at eu.etaxonomy.cdm.database.CdmDataSourceBase.getSingleValue(CdmDataSourceBase.java:136)
+ at eu.etaxonomy.cdm.database.CdmPersistentDataSource.getSingleValue(CdmPersistentDataSource.java:51)
+ at eu.etaxonomy.cdm.database.CdmDataSourceBase.getMetaDataMap(CdmDataSourceBase.java:288)
+ at eu.etaxonomy.cdm.database.CdmPersistentDataSource.getMetaDataMap(CdmPersistentDataSource.java:51)
+ at eu.etaxonomy.taxeditor.view.datasource.CdmMetaDataAwareDataSourceContainer.getMetaDataFromDataSource(CdmMetaDataAwareDataSourceContainer.java:84)
+ at eu.etaxonomy.taxeditor.view.datasource.CdmDataSourceViewPart$DataSourceJob.run(CdmDataSourceViewPart.java:140)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+
+org.h2.message.DbException: The connection was not closed by the application and is garbage collected [90018-170]
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.message.DbException.get(DbException.java:135)
+ at org.h2.jdbc.JdbcConnection.closeOld(JdbcConnection.java:175)
+ at org.h2.jdbc.JdbcConnection.<init>(JdbcConnection.java:120)
+ at org.h2.jdbc.JdbcConnection.<init>(JdbcConnection.java:93)
+ at org.h2.Driver.connect(Driver.java:72)
+ at org.apache.commons.dbcp.DriverConnectionFactory.createConnection(DriverConnectionFactory.java:38)
+ at org.apache.commons.dbcp.PoolableConnectionFactory.makeObject(PoolableConnectionFactory.java:582)
+ at org.apache.commons.dbcp.BasicDataSource.validateConnectionFactory(BasicDataSource.java:1556)
+ at org.apache.commons.dbcp.BasicDataSource.createPoolableConnectionFactory(BasicDataSource.java:1545)
+ at org.apache.commons.dbcp.BasicDataSource.createDataSource(BasicDataSource.java:1388)
+ at eu.etaxonomy.cdm.database.LocalH2.createDataSource(LocalH2.java:88)
+ at org.apache.commons.dbcp.BasicDataSource.getConnection(BasicDataSource.java:1044)
+ at org.hibernate.service.jdbc.connections.internal.DatasourceConnectionProviderImpl.getConnection(DatasourceConnectionProviderImpl.java:141)
+ at org.hibernate.engine.jdbc.internal.JdbcServicesImpl$ConnectionProviderJdbcConnectionAccess.obtainConnection(JdbcServicesImpl.java:242)
+ at org.hibernate.engine.jdbc.internal.JdbcServicesImpl.configure(JdbcServicesImpl.java:117)
+ at org.hibernate.service.internal.StandardServiceRegistryImpl.configureService(StandardServiceRegistryImpl.java:75)
+ at org.hibernate.service.internal.AbstractServiceRegistryImpl.initializeService(AbstractServiceRegistryImpl.java:159)
+ at org.hibernate.service.internal.AbstractServiceRegistryImpl.getService(AbstractServiceRegistryImpl.java:131)
+ at org.hibernate.cfg.SettingsFactory.buildSettings(SettingsFactory.java:77)
+ at org.hibernate.cfg.Configuration.buildSettingsInternal(Configuration.java:2276)
+ at org.hibernate.cfg.Configuration.buildSettings(Configuration.java:2272)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1741)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1781)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBuilder.buildSessionFactory(LocalSessionFactoryBuilder.java:247)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.buildSessionFactory(LocalSessionFactoryBean.java:373)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.afterPropertiesSet(LocalSessionFactoryBean.java:358)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1547)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1485)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:524)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:323)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:107)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1393)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1134)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:522)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:626)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.preInstantiateSingletons(MonitoredListableBeanFactory.java:71)
+ at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:932)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.finishBeanFactoryInitialization(MonitoredGenericApplicationContext.java:74)
+ at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:479)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.refresh(MonitoredGenericApplicationContext.java:102)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.setNewDataSource(CdmApplicationController.java:264)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.<init>(CdmApplicationController.java:204)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.NewInstance(CdmApplicationController.java:148)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.getApplicationController(CdmStoreConnector.java:151)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.run(CdmStoreConnector.java:99)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+Caused by: org.h2.jdbc.JdbcSQLException: The connection was not closed by the application and is garbage collected [90018-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ ... 60 more
+06-15 17:38:06 jdbc[7]: java.lang.Exception: Open Stack Trace
+ at org.h2.util.CloseWatcher.register(CloseWatcher.java:99)
+ at org.h2.jdbc.JdbcConnection.<init>(JdbcConnection.java:121)
+ at org.h2.jdbc.JdbcConnection.<init>(JdbcConnection.java:93)
+ at org.h2.Driver.connect(Driver.java:72)
+ at java.sql.DriverManager.getConnection(DriverManager.java:571)
+ at java.sql.DriverManager.getConnection(DriverManager.java:215)
+ at eu.etaxonomy.cdm.database.CdmDataSourceBase.getConnection(CdmDataSourceBase.java:67)
+ at eu.etaxonomy.cdm.database.CdmPersistentDataSource.getConnection(CdmPersistentDataSource.java:51)
+ at eu.etaxonomy.cdm.database.CdmDataSourceBase.getConnection(CdmDataSourceBase.java:45)
+ at eu.etaxonomy.cdm.database.CdmPersistentDataSource.getConnection(CdmPersistentDataSource.java:51)
+ at eu.etaxonomy.cdm.database.CdmDataSourceBase.executeQuery(CdmDataSourceBase.java:182)
+ at eu.etaxonomy.cdm.database.CdmPersistentDataSource.executeQuery(CdmPersistentDataSource.java:51)
+ at eu.etaxonomy.cdm.database.CdmDataSourceBase.getSingleValue(CdmDataSourceBase.java:136)
+ at eu.etaxonomy.cdm.database.CdmPersistentDataSource.getSingleValue(CdmPersistentDataSource.java:51)
+ at eu.etaxonomy.cdm.database.CdmDataSourceBase.getMetaDataMap(CdmDataSourceBase.java:288)
+ at eu.etaxonomy.cdm.database.CdmPersistentDataSource.getMetaDataMap(CdmPersistentDataSource.java:51)
+ at eu.etaxonomy.taxeditor.view.datasource.CdmMetaDataAwareDataSourceContainer.getMetaDataFromDataSource(CdmMetaDataAwareDataSourceContainer.java:84)
+ at eu.etaxonomy.taxeditor.view.datasource.CdmDataSourceViewPart$DataSourceJob.run(CdmDataSourceViewPart.java:140)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+
+org.h2.message.DbException: The connection was not closed by the application and is garbage collected [90018-170]
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.message.DbException.get(DbException.java:135)
+ at org.h2.jdbc.JdbcConnection.closeOld(JdbcConnection.java:175)
+ at org.h2.jdbc.JdbcConnection.<init>(JdbcConnection.java:120)
+ at org.h2.jdbc.JdbcConnection.<init>(JdbcConnection.java:93)
+ at org.h2.Driver.connect(Driver.java:72)
+ at org.apache.commons.dbcp.DriverConnectionFactory.createConnection(DriverConnectionFactory.java:38)
+ at org.apache.commons.dbcp.PoolableConnectionFactory.makeObject(PoolableConnectionFactory.java:582)
+ at org.apache.commons.dbcp.BasicDataSource.validateConnectionFactory(BasicDataSource.java:1556)
+ at org.apache.commons.dbcp.BasicDataSource.createPoolableConnectionFactory(BasicDataSource.java:1545)
+ at org.apache.commons.dbcp.BasicDataSource.createDataSource(BasicDataSource.java:1388)
+ at eu.etaxonomy.cdm.database.LocalH2.createDataSource(LocalH2.java:88)
+ at org.apache.commons.dbcp.BasicDataSource.getConnection(BasicDataSource.java:1044)
+ at org.hibernate.service.jdbc.connections.internal.DatasourceConnectionProviderImpl.getConnection(DatasourceConnectionProviderImpl.java:141)
+ at org.hibernate.engine.jdbc.internal.JdbcServicesImpl$ConnectionProviderJdbcConnectionAccess.obtainConnection(JdbcServicesImpl.java:242)
+ at org.hibernate.engine.jdbc.internal.JdbcServicesImpl.configure(JdbcServicesImpl.java:117)
+ at org.hibernate.service.internal.StandardServiceRegistryImpl.configureService(StandardServiceRegistryImpl.java:75)
+ at org.hibernate.service.internal.AbstractServiceRegistryImpl.initializeService(AbstractServiceRegistryImpl.java:159)
+ at org.hibernate.service.internal.AbstractServiceRegistryImpl.getService(AbstractServiceRegistryImpl.java:131)
+ at org.hibernate.cfg.SettingsFactory.buildSettings(SettingsFactory.java:77)
+ at org.hibernate.cfg.Configuration.buildSettingsInternal(Configuration.java:2276)
+ at org.hibernate.cfg.Configuration.buildSettings(Configuration.java:2272)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1741)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1781)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBuilder.buildSessionFactory(LocalSessionFactoryBuilder.java:247)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.buildSessionFactory(LocalSessionFactoryBean.java:373)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.afterPropertiesSet(LocalSessionFactoryBean.java:358)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1547)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1485)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:524)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:323)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:107)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1393)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1134)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:522)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:626)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.preInstantiateSingletons(MonitoredListableBeanFactory.java:71)
+ at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:932)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.finishBeanFactoryInitialization(MonitoredGenericApplicationContext.java:74)
+ at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:479)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.refresh(MonitoredGenericApplicationContext.java:102)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.setNewDataSource(CdmApplicationController.java:264)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.<init>(CdmApplicationController.java:204)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.NewInstance(CdmApplicationController.java:148)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.getApplicationController(CdmStoreConnector.java:151)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.run(CdmStoreConnector.java:99)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+Caused by: org.h2.jdbc.JdbcSQLException: The connection was not closed by the application and is garbage collected [90018-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ ... 60 more
+06-15 17:38:06 jdbc[7]: java.lang.Exception: Open Stack Trace
+ at org.h2.util.CloseWatcher.register(CloseWatcher.java:99)
+ at org.h2.jdbc.JdbcConnection.<init>(JdbcConnection.java:121)
+ at org.h2.jdbc.JdbcConnection.<init>(JdbcConnection.java:93)
+ at org.h2.Driver.connect(Driver.java:72)
+ at java.sql.DriverManager.getConnection(DriverManager.java:571)
+ at java.sql.DriverManager.getConnection(DriverManager.java:215)
+ at eu.etaxonomy.cdm.database.CdmDataSourceBase.getConnection(CdmDataSourceBase.java:67)
+ at eu.etaxonomy.cdm.database.CdmPersistentDataSource.getConnection(CdmPersistentDataSource.java:51)
+ at eu.etaxonomy.cdm.database.CdmDataSourceBase.getConnection(CdmDataSourceBase.java:45)
+ at eu.etaxonomy.cdm.database.CdmPersistentDataSource.getConnection(CdmPersistentDataSource.java:51)
+ at eu.etaxonomy.cdm.database.CdmDataSourceBase.executeQuery(CdmDataSourceBase.java:182)
+ at eu.etaxonomy.cdm.database.CdmPersistentDataSource.executeQuery(CdmPersistentDataSource.java:51)
+ at eu.etaxonomy.cdm.database.CdmDataSourceBase.getSingleValue(CdmDataSourceBase.java:136)
+ at eu.etaxonomy.cdm.database.CdmPersistentDataSource.getSingleValue(CdmPersistentDataSource.java:51)
+ at eu.etaxonomy.cdm.database.CdmDataSourceBase.getDbSchemaVersion(CdmDataSourceBase.java:156)
+ at eu.etaxonomy.cdm.database.CdmPersistentDataSource.getDbSchemaVersion(CdmPersistentDataSource.java:51)
+ at eu.etaxonomy.cdm.database.CdmDataSourceBase.isDbEmpty(CdmDataSourceBase.java:165)
+ at eu.etaxonomy.cdm.database.CdmPersistentDataSource.isDbEmpty(CdmPersistentDataSource.java:51)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.checkIsNonEmptyCdmDatabase(CdmStoreConnector.java:231)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.run(CdmStoreConnector.java:73)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+
+org.h2.message.DbException: The connection was not closed by the application and is garbage collected [90018-170]
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.message.DbException.get(DbException.java:135)
+ at org.h2.jdbc.JdbcConnection.closeOld(JdbcConnection.java:175)
+ at org.h2.jdbc.JdbcConnection.<init>(JdbcConnection.java:120)
+ at org.h2.jdbc.JdbcConnection.<init>(JdbcConnection.java:93)
+ at org.h2.Driver.connect(Driver.java:72)
+ at org.apache.commons.dbcp.DriverConnectionFactory.createConnection(DriverConnectionFactory.java:38)
+ at org.apache.commons.dbcp.PoolableConnectionFactory.makeObject(PoolableConnectionFactory.java:582)
+ at org.apache.commons.dbcp.BasicDataSource.validateConnectionFactory(BasicDataSource.java:1556)
+ at org.apache.commons.dbcp.BasicDataSource.createPoolableConnectionFactory(BasicDataSource.java:1545)
+ at org.apache.commons.dbcp.BasicDataSource.createDataSource(BasicDataSource.java:1388)
+ at eu.etaxonomy.cdm.database.LocalH2.createDataSource(LocalH2.java:88)
+ at org.apache.commons.dbcp.BasicDataSource.getConnection(BasicDataSource.java:1044)
+ at org.hibernate.service.jdbc.connections.internal.DatasourceConnectionProviderImpl.getConnection(DatasourceConnectionProviderImpl.java:141)
+ at org.hibernate.engine.jdbc.internal.JdbcServicesImpl$ConnectionProviderJdbcConnectionAccess.obtainConnection(JdbcServicesImpl.java:242)
+ at org.hibernate.engine.jdbc.internal.JdbcServicesImpl.configure(JdbcServicesImpl.java:117)
+ at org.hibernate.service.internal.StandardServiceRegistryImpl.configureService(StandardServiceRegistryImpl.java:75)
+ at org.hibernate.service.internal.AbstractServiceRegistryImpl.initializeService(AbstractServiceRegistryImpl.java:159)
+ at org.hibernate.service.internal.AbstractServiceRegistryImpl.getService(AbstractServiceRegistryImpl.java:131)
+ at org.hibernate.cfg.SettingsFactory.buildSettings(SettingsFactory.java:77)
+ at org.hibernate.cfg.Configuration.buildSettingsInternal(Configuration.java:2276)
+ at org.hibernate.cfg.Configuration.buildSettings(Configuration.java:2272)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1741)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1781)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBuilder.buildSessionFactory(LocalSessionFactoryBuilder.java:247)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.buildSessionFactory(LocalSessionFactoryBean.java:373)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.afterPropertiesSet(LocalSessionFactoryBean.java:358)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1547)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1485)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:524)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:323)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:107)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1393)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1134)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:522)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:626)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.preInstantiateSingletons(MonitoredListableBeanFactory.java:71)
+ at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:932)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.finishBeanFactoryInitialization(MonitoredGenericApplicationContext.java:74)
+ at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:479)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.refresh(MonitoredGenericApplicationContext.java:102)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.setNewDataSource(CdmApplicationController.java:264)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.<init>(CdmApplicationController.java:204)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.NewInstance(CdmApplicationController.java:148)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.getApplicationController(CdmStoreConnector.java:151)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.run(CdmStoreConnector.java:99)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+Caused by: org.h2.jdbc.JdbcSQLException: The connection was not closed by the application and is garbage collected [90018-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ ... 60 more
+06-15 17:38:06 jdbc[7]: java.lang.Exception: Open Stack Trace
+ at org.h2.util.CloseWatcher.register(CloseWatcher.java:99)
+ at org.h2.jdbc.JdbcConnection.<init>(JdbcConnection.java:121)
+ at org.h2.jdbc.JdbcConnection.<init>(JdbcConnection.java:93)
+ at org.h2.Driver.connect(Driver.java:72)
+ at java.sql.DriverManager.getConnection(DriverManager.java:571)
+ at java.sql.DriverManager.getConnection(DriverManager.java:215)
+ at eu.etaxonomy.cdm.database.CdmDataSourceBase.testConnection(CdmDataSourceBase.java:93)
+ at eu.etaxonomy.cdm.database.CdmPersistentDataSource.testConnection(CdmPersistentDataSource.java:51)
+ at eu.etaxonomy.cdm.database.CdmDataSourceBase.checkConnection(CdmDataSourceBase.java:110)
+ at eu.etaxonomy.cdm.database.CdmPersistentDataSource.checkConnection(CdmPersistentDataSource.java:51)
+ at eu.etaxonomy.taxeditor.view.datasource.handler.ChangeConnectionHandler.execute(ChangeConnectionHandler.java:49)
+ at org.eclipse.ui.internal.handlers.HandlerProxy.execute(HandlerProxy.java:293)
+ at org.eclipse.core.commands.Command.executeWithChecks(Command.java:476)
+ at org.eclipse.core.commands.ParameterizedCommand.executeWithChecks(ParameterizedCommand.java:508)
+ at org.eclipse.ui.internal.handlers.HandlerService.executeCommand(HandlerService.java:169)
+ at org.eclipse.ui.internal.handlers.SlaveHandlerService.executeCommand(SlaveHandlerService.java:241)
+ at org.eclipse.ui.internal.handlers.SlaveHandlerService.executeCommand(SlaveHandlerService.java:241)
+ at org.eclipse.ui.menus.CommandContributionItem.handleWidgetSelection(CommandContributionItem.java:829)
+ at org.eclipse.ui.menus.CommandContributionItem.access$19(CommandContributionItem.java:815)
+ at org.eclipse.ui.menus.CommandContributionItem$5.handleEvent(CommandContributionItem.java:805)
+ at org.eclipse.swt.widgets.EventTable.sendEvent(EventTable.java:84)
+ at org.eclipse.swt.widgets.Widget.sendEvent(Widget.java:1258)
+ at org.eclipse.swt.widgets.Display.runDeferredEvents(Display.java:3588)
+ at org.eclipse.swt.widgets.Display.readAndDispatch(Display.java:3209)
+ at org.eclipse.ui.internal.Workbench.runEventLoop(Workbench.java:2701)
+ at org.eclipse.ui.internal.Workbench.runUI(Workbench.java:2665)
+ at org.eclipse.ui.internal.Workbench.access$4(Workbench.java:2499)
+ at org.eclipse.ui.internal.Workbench$7.run(Workbench.java:679)
+ at org.eclipse.core.databinding.observable.Realm.runWithDefault(Realm.java:332)
+ at org.eclipse.ui.internal.Workbench.createAndRunWorkbench(Workbench.java:668)
+ at org.eclipse.ui.PlatformUI.createAndRunWorkbench(PlatformUI.java:149)
+ at eu.etaxonomy.taxeditor.Application.start(Application.java:24)
+ at org.eclipse.equinox.internal.app.EclipseAppHandle.run(EclipseAppHandle.java:196)
+ at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.runApplication(EclipseAppLauncher.java:110)
+ at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.start(EclipseAppLauncher.java:79)
+ at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:344)
+ at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:179)
+ at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
+ at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
+ at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
+ at java.lang.reflect.Method.invoke(Method.java:606)
+ at org.eclipse.equinox.launcher.Main.invokeFramework(Main.java:622)
+ at org.eclipse.equinox.launcher.Main.basicRun(Main.java:577)
+ at org.eclipse.equinox.launcher.Main.run(Main.java:1410)
+ at org.eclipse.equinox.launcher.Main.main(Main.java:1386)
+
+org.h2.message.DbException: The connection was not closed by the application and is garbage collected [90018-170]
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.message.DbException.get(DbException.java:135)
+ at org.h2.jdbc.JdbcConnection.closeOld(JdbcConnection.java:175)
+ at org.h2.jdbc.JdbcConnection.<init>(JdbcConnection.java:120)
+ at org.h2.jdbc.JdbcConnection.<init>(JdbcConnection.java:93)
+ at org.h2.Driver.connect(Driver.java:72)
+ at org.apache.commons.dbcp.DriverConnectionFactory.createConnection(DriverConnectionFactory.java:38)
+ at org.apache.commons.dbcp.PoolableConnectionFactory.makeObject(PoolableConnectionFactory.java:582)
+ at org.apache.commons.dbcp.BasicDataSource.validateConnectionFactory(BasicDataSource.java:1556)
+ at org.apache.commons.dbcp.BasicDataSource.createPoolableConnectionFactory(BasicDataSource.java:1545)
+ at org.apache.commons.dbcp.BasicDataSource.createDataSource(BasicDataSource.java:1388)
+ at eu.etaxonomy.cdm.database.LocalH2.createDataSource(LocalH2.java:88)
+ at org.apache.commons.dbcp.BasicDataSource.getConnection(BasicDataSource.java:1044)
+ at org.hibernate.service.jdbc.connections.internal.DatasourceConnectionProviderImpl.getConnection(DatasourceConnectionProviderImpl.java:141)
+ at org.hibernate.engine.jdbc.internal.JdbcServicesImpl$ConnectionProviderJdbcConnectionAccess.obtainConnection(JdbcServicesImpl.java:242)
+ at org.hibernate.engine.jdbc.internal.JdbcServicesImpl.configure(JdbcServicesImpl.java:117)
+ at org.hibernate.service.internal.StandardServiceRegistryImpl.configureService(StandardServiceRegistryImpl.java:75)
+ at org.hibernate.service.internal.AbstractServiceRegistryImpl.initializeService(AbstractServiceRegistryImpl.java:159)
+ at org.hibernate.service.internal.AbstractServiceRegistryImpl.getService(AbstractServiceRegistryImpl.java:131)
+ at org.hibernate.cfg.SettingsFactory.buildSettings(SettingsFactory.java:77)
+ at org.hibernate.cfg.Configuration.buildSettingsInternal(Configuration.java:2276)
+ at org.hibernate.cfg.Configuration.buildSettings(Configuration.java:2272)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1741)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1781)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBuilder.buildSessionFactory(LocalSessionFactoryBuilder.java:247)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.buildSessionFactory(LocalSessionFactoryBean.java:373)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.afterPropertiesSet(LocalSessionFactoryBean.java:358)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1547)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1485)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:524)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:323)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:107)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1393)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1134)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:522)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:626)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.preInstantiateSingletons(MonitoredListableBeanFactory.java:71)
+ at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:932)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.finishBeanFactoryInitialization(MonitoredGenericApplicationContext.java:74)
+ at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:479)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.refresh(MonitoredGenericApplicationContext.java:102)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.setNewDataSource(CdmApplicationController.java:264)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.<init>(CdmApplicationController.java:204)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.NewInstance(CdmApplicationController.java:148)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.getApplicationController(CdmStoreConnector.java:151)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.run(CdmStoreConnector.java:99)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+Caused by: org.h2.jdbc.JdbcSQLException: The connection was not closed by the application and is garbage collected [90018-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ ... 60 more
+06-15 17:38:06 jdbc[7]: java.lang.Exception: Open Stack Trace
+ at org.h2.util.CloseWatcher.register(CloseWatcher.java:99)
+ at org.h2.jdbc.JdbcConnection.<init>(JdbcConnection.java:121)
+ at org.h2.jdbc.JdbcConnection.<init>(JdbcConnection.java:93)
+ at org.h2.Driver.connect(Driver.java:72)
+ at java.sql.DriverManager.getConnection(DriverManager.java:571)
+ at java.sql.DriverManager.getConnection(DriverManager.java:215)
+ at eu.etaxonomy.cdm.database.CdmDataSourceBase.getConnection(CdmDataSourceBase.java:67)
+ at eu.etaxonomy.cdm.database.CdmPersistentDataSource.getConnection(CdmPersistentDataSource.java:51)
+ at eu.etaxonomy.cdm.database.CdmDataSourceBase.getConnection(CdmDataSourceBase.java:45)
+ at eu.etaxonomy.cdm.database.CdmPersistentDataSource.getConnection(CdmPersistentDataSource.java:51)
+ at eu.etaxonomy.cdm.database.CdmDataSourceBase.executeQuery(CdmDataSourceBase.java:182)
+ at eu.etaxonomy.cdm.database.CdmPersistentDataSource.executeQuery(CdmPersistentDataSource.java:51)
+ at eu.etaxonomy.cdm.database.CdmDataSourceBase.getSingleValue(CdmDataSourceBase.java:136)
+ at eu.etaxonomy.cdm.database.CdmPersistentDataSource.getSingleValue(CdmPersistentDataSource.java:51)
+ at eu.etaxonomy.cdm.database.CdmDataSourceBase.getMetaDataMap(CdmDataSourceBase.java:288)
+ at eu.etaxonomy.cdm.database.CdmPersistentDataSource.getMetaDataMap(CdmPersistentDataSource.java:51)
+ at eu.etaxonomy.taxeditor.view.datasource.CdmMetaDataAwareDataSourceContainer.getMetaDataFromDataSource(CdmMetaDataAwareDataSourceContainer.java:84)
+ at eu.etaxonomy.taxeditor.view.datasource.CdmDataSourceViewPart$DataSourceJob.run(CdmDataSourceViewPart.java:140)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+
+org.h2.message.DbException: The connection was not closed by the application and is garbage collected [90018-170]
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.message.DbException.get(DbException.java:135)
+ at org.h2.jdbc.JdbcConnection.closeOld(JdbcConnection.java:175)
+ at org.h2.jdbc.JdbcConnection.<init>(JdbcConnection.java:120)
+ at org.h2.jdbc.JdbcConnection.<init>(JdbcConnection.java:93)
+ at org.h2.Driver.connect(Driver.java:72)
+ at org.apache.commons.dbcp.DriverConnectionFactory.createConnection(DriverConnectionFactory.java:38)
+ at org.apache.commons.dbcp.PoolableConnectionFactory.makeObject(PoolableConnectionFactory.java:582)
+ at org.apache.commons.dbcp.BasicDataSource.validateConnectionFactory(BasicDataSource.java:1556)
+ at org.apache.commons.dbcp.BasicDataSource.createPoolableConnectionFactory(BasicDataSource.java:1545)
+ at org.apache.commons.dbcp.BasicDataSource.createDataSource(BasicDataSource.java:1388)
+ at eu.etaxonomy.cdm.database.LocalH2.createDataSource(LocalH2.java:88)
+ at org.apache.commons.dbcp.BasicDataSource.getConnection(BasicDataSource.java:1044)
+ at org.hibernate.service.jdbc.connections.internal.DatasourceConnectionProviderImpl.getConnection(DatasourceConnectionProviderImpl.java:141)
+ at org.hibernate.engine.jdbc.internal.JdbcServicesImpl$ConnectionProviderJdbcConnectionAccess.obtainConnection(JdbcServicesImpl.java:242)
+ at org.hibernate.engine.jdbc.internal.JdbcServicesImpl.configure(JdbcServicesImpl.java:117)
+ at org.hibernate.service.internal.StandardServiceRegistryImpl.configureService(StandardServiceRegistryImpl.java:75)
+ at org.hibernate.service.internal.AbstractServiceRegistryImpl.initializeService(AbstractServiceRegistryImpl.java:159)
+ at org.hibernate.service.internal.AbstractServiceRegistryImpl.getService(AbstractServiceRegistryImpl.java:131)
+ at org.hibernate.cfg.SettingsFactory.buildSettings(SettingsFactory.java:77)
+ at org.hibernate.cfg.Configuration.buildSettingsInternal(Configuration.java:2276)
+ at org.hibernate.cfg.Configuration.buildSettings(Configuration.java:2272)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1741)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1781)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBuilder.buildSessionFactory(LocalSessionFactoryBuilder.java:247)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.buildSessionFactory(LocalSessionFactoryBean.java:373)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.afterPropertiesSet(LocalSessionFactoryBean.java:358)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1547)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1485)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:524)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:323)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:107)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1393)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1134)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:522)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:626)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.preInstantiateSingletons(MonitoredListableBeanFactory.java:71)
+ at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:932)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.finishBeanFactoryInitialization(MonitoredGenericApplicationContext.java:74)
+ at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:479)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.refresh(MonitoredGenericApplicationContext.java:102)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.setNewDataSource(CdmApplicationController.java:264)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.<init>(CdmApplicationController.java:204)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.NewInstance(CdmApplicationController.java:148)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.getApplicationController(CdmStoreConnector.java:151)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.run(CdmStoreConnector.java:99)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+Caused by: org.h2.jdbc.JdbcSQLException: The connection was not closed by the application and is garbage collected [90018-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ ... 60 more
+06-15 17:38:06 jdbc[7]: java.lang.Exception: Open Stack Trace
+ at org.h2.util.CloseWatcher.register(CloseWatcher.java:99)
+ at org.h2.jdbc.JdbcConnection.<init>(JdbcConnection.java:121)
+ at org.h2.jdbc.JdbcConnection.<init>(JdbcConnection.java:93)
+ at org.h2.Driver.connect(Driver.java:72)
+ at java.sql.DriverManager.getConnection(DriverManager.java:571)
+ at java.sql.DriverManager.getConnection(DriverManager.java:215)
+ at eu.etaxonomy.cdm.database.CdmDataSourceBase.getConnection(CdmDataSourceBase.java:67)
+ at eu.etaxonomy.cdm.database.CdmPersistentDataSource.getConnection(CdmPersistentDataSource.java:51)
+ at eu.etaxonomy.cdm.database.CdmDataSourceBase.getConnection(CdmDataSourceBase.java:45)
+ at eu.etaxonomy.cdm.database.CdmPersistentDataSource.getConnection(CdmPersistentDataSource.java:51)
+ at eu.etaxonomy.cdm.database.CdmDataSourceBase.executeQuery(CdmDataSourceBase.java:182)
+ at eu.etaxonomy.cdm.database.CdmPersistentDataSource.executeQuery(CdmPersistentDataSource.java:51)
+ at eu.etaxonomy.cdm.database.CdmDataSourceBase.getSingleValue(CdmDataSourceBase.java:136)
+ at eu.etaxonomy.cdm.database.CdmPersistentDataSource.getSingleValue(CdmPersistentDataSource.java:51)
+ at eu.etaxonomy.cdm.database.CdmDataSourceBase.getMetaDataMap(CdmDataSourceBase.java:288)
+ at eu.etaxonomy.cdm.database.CdmPersistentDataSource.getMetaDataMap(CdmPersistentDataSource.java:51)
+ at eu.etaxonomy.taxeditor.view.datasource.CdmMetaDataAwareDataSourceContainer.getMetaDataFromDataSource(CdmMetaDataAwareDataSourceContainer.java:84)
+ at eu.etaxonomy.taxeditor.view.datasource.CdmDataSourceViewPart$DataSourceJob.run(CdmDataSourceViewPart.java:140)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+
+org.h2.message.DbException: The connection was not closed by the application and is garbage collected [90018-170]
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.message.DbException.get(DbException.java:135)
+ at org.h2.jdbc.JdbcConnection.closeOld(JdbcConnection.java:175)
+ at org.h2.jdbc.JdbcConnection.<init>(JdbcConnection.java:120)
+ at org.h2.jdbc.JdbcConnection.<init>(JdbcConnection.java:93)
+ at org.h2.Driver.connect(Driver.java:72)
+ at org.apache.commons.dbcp.DriverConnectionFactory.createConnection(DriverConnectionFactory.java:38)
+ at org.apache.commons.dbcp.PoolableConnectionFactory.makeObject(PoolableConnectionFactory.java:582)
+ at org.apache.commons.dbcp.BasicDataSource.validateConnectionFactory(BasicDataSource.java:1556)
+ at org.apache.commons.dbcp.BasicDataSource.createPoolableConnectionFactory(BasicDataSource.java:1545)
+ at org.apache.commons.dbcp.BasicDataSource.createDataSource(BasicDataSource.java:1388)
+ at eu.etaxonomy.cdm.database.LocalH2.createDataSource(LocalH2.java:88)
+ at org.apache.commons.dbcp.BasicDataSource.getConnection(BasicDataSource.java:1044)
+ at org.hibernate.service.jdbc.connections.internal.DatasourceConnectionProviderImpl.getConnection(DatasourceConnectionProviderImpl.java:141)
+ at org.hibernate.engine.jdbc.internal.JdbcServicesImpl$ConnectionProviderJdbcConnectionAccess.obtainConnection(JdbcServicesImpl.java:242)
+ at org.hibernate.engine.jdbc.internal.JdbcServicesImpl.configure(JdbcServicesImpl.java:117)
+ at org.hibernate.service.internal.StandardServiceRegistryImpl.configureService(StandardServiceRegistryImpl.java:75)
+ at org.hibernate.service.internal.AbstractServiceRegistryImpl.initializeService(AbstractServiceRegistryImpl.java:159)
+ at org.hibernate.service.internal.AbstractServiceRegistryImpl.getService(AbstractServiceRegistryImpl.java:131)
+ at org.hibernate.cfg.SettingsFactory.buildSettings(SettingsFactory.java:77)
+ at org.hibernate.cfg.Configuration.buildSettingsInternal(Configuration.java:2276)
+ at org.hibernate.cfg.Configuration.buildSettings(Configuration.java:2272)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1741)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1781)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBuilder.buildSessionFactory(LocalSessionFactoryBuilder.java:247)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.buildSessionFactory(LocalSessionFactoryBean.java:373)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.afterPropertiesSet(LocalSessionFactoryBean.java:358)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1547)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1485)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:524)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:323)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:107)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1393)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1134)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:522)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:626)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.preInstantiateSingletons(MonitoredListableBeanFactory.java:71)
+ at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:932)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.finishBeanFactoryInitialization(MonitoredGenericApplicationContext.java:74)
+ at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:479)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.refresh(MonitoredGenericApplicationContext.java:102)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.setNewDataSource(CdmApplicationController.java:264)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.<init>(CdmApplicationController.java:204)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.NewInstance(CdmApplicationController.java:148)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.getApplicationController(CdmStoreConnector.java:151)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.run(CdmStoreConnector.java:99)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+Caused by: org.h2.jdbc.JdbcSQLException: The connection was not closed by the application and is garbage collected [90018-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ ... 60 more
+06-15 17:38:06 jdbc[7]: java.lang.Exception: Open Stack Trace
+ at org.h2.util.CloseWatcher.register(CloseWatcher.java:99)
+ at org.h2.jdbc.JdbcConnection.<init>(JdbcConnection.java:121)
+ at org.h2.jdbc.JdbcConnection.<init>(JdbcConnection.java:93)
+ at org.h2.Driver.connect(Driver.java:72)
+ at java.sql.DriverManager.getConnection(DriverManager.java:571)
+ at java.sql.DriverManager.getConnection(DriverManager.java:215)
+ at eu.etaxonomy.cdm.database.CdmDataSourceBase.getConnection(CdmDataSourceBase.java:67)
+ at eu.etaxonomy.cdm.database.CdmPersistentDataSource.getConnection(CdmPersistentDataSource.java:51)
+ at eu.etaxonomy.cdm.database.CdmDataSourceBase.getConnection(CdmDataSourceBase.java:45)
+ at eu.etaxonomy.cdm.database.CdmPersistentDataSource.getConnection(CdmPersistentDataSource.java:51)
+ at eu.etaxonomy.cdm.database.CdmDataSourceBase.executeQuery(CdmDataSourceBase.java:182)
+ at eu.etaxonomy.cdm.database.CdmPersistentDataSource.executeQuery(CdmPersistentDataSource.java:51)
+ at eu.etaxonomy.cdm.database.CdmDataSourceBase.getSingleValue(CdmDataSourceBase.java:136)
+ at eu.etaxonomy.cdm.database.CdmPersistentDataSource.getSingleValue(CdmPersistentDataSource.java:51)
+ at eu.etaxonomy.cdm.database.CdmDataSourceBase.getMetaDataMap(CdmDataSourceBase.java:288)
+ at eu.etaxonomy.cdm.database.CdmPersistentDataSource.getMetaDataMap(CdmPersistentDataSource.java:51)
+ at eu.etaxonomy.taxeditor.view.datasource.CdmMetaDataAwareDataSourceContainer.getMetaDataFromDataSource(CdmMetaDataAwareDataSourceContainer.java:84)
+ at eu.etaxonomy.taxeditor.view.datasource.CdmDataSourceViewPart$DataSourceJob.run(CdmDataSourceViewPart.java:140)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+
+org.h2.message.DbException: The connection was not closed by the application and is garbage collected [90018-170]
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.message.DbException.get(DbException.java:135)
+ at org.h2.jdbc.JdbcConnection.closeOld(JdbcConnection.java:175)
+ at org.h2.jdbc.JdbcConnection.<init>(JdbcConnection.java:120)
+ at org.h2.jdbc.JdbcConnection.<init>(JdbcConnection.java:93)
+ at org.h2.Driver.connect(Driver.java:72)
+ at org.apache.commons.dbcp.DriverConnectionFactory.createConnection(DriverConnectionFactory.java:38)
+ at org.apache.commons.dbcp.PoolableConnectionFactory.makeObject(PoolableConnectionFactory.java:582)
+ at org.apache.commons.dbcp.BasicDataSource.validateConnectionFactory(BasicDataSource.java:1556)
+ at org.apache.commons.dbcp.BasicDataSource.createPoolableConnectionFactory(BasicDataSource.java:1545)
+ at org.apache.commons.dbcp.BasicDataSource.createDataSource(BasicDataSource.java:1388)
+ at eu.etaxonomy.cdm.database.LocalH2.createDataSource(LocalH2.java:88)
+ at org.apache.commons.dbcp.BasicDataSource.getConnection(BasicDataSource.java:1044)
+ at org.hibernate.service.jdbc.connections.internal.DatasourceConnectionProviderImpl.getConnection(DatasourceConnectionProviderImpl.java:141)
+ at org.hibernate.engine.jdbc.internal.JdbcServicesImpl$ConnectionProviderJdbcConnectionAccess.obtainConnection(JdbcServicesImpl.java:242)
+ at org.hibernate.engine.jdbc.internal.JdbcServicesImpl.configure(JdbcServicesImpl.java:117)
+ at org.hibernate.service.internal.StandardServiceRegistryImpl.configureService(StandardServiceRegistryImpl.java:75)
+ at org.hibernate.service.internal.AbstractServiceRegistryImpl.initializeService(AbstractServiceRegistryImpl.java:159)
+ at org.hibernate.service.internal.AbstractServiceRegistryImpl.getService(AbstractServiceRegistryImpl.java:131)
+ at org.hibernate.cfg.SettingsFactory.buildSettings(SettingsFactory.java:77)
+ at org.hibernate.cfg.Configuration.buildSettingsInternal(Configuration.java:2276)
+ at org.hibernate.cfg.Configuration.buildSettings(Configuration.java:2272)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1741)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1781)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBuilder.buildSessionFactory(LocalSessionFactoryBuilder.java:247)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.buildSessionFactory(LocalSessionFactoryBean.java:373)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.afterPropertiesSet(LocalSessionFactoryBean.java:358)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1547)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1485)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:524)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:323)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:107)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1393)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1134)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:522)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:626)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.preInstantiateSingletons(MonitoredListableBeanFactory.java:71)
+ at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:932)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.finishBeanFactoryInitialization(MonitoredGenericApplicationContext.java:74)
+ at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:479)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.refresh(MonitoredGenericApplicationContext.java:102)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.setNewDataSource(CdmApplicationController.java:264)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.<init>(CdmApplicationController.java:204)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.NewInstance(CdmApplicationController.java:148)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.getApplicationController(CdmStoreConnector.java:151)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.run(CdmStoreConnector.java:99)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+Caused by: org.h2.jdbc.JdbcSQLException: The connection was not closed by the application and is garbage collected [90018-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ ... 60 more
+06-15 17:38:06 jdbc[7]: java.lang.Exception: Open Stack Trace
+ at org.h2.util.CloseWatcher.register(CloseWatcher.java:99)
+ at org.h2.jdbc.JdbcConnection.<init>(JdbcConnection.java:121)
+ at org.h2.jdbc.JdbcConnection.<init>(JdbcConnection.java:93)
+ at org.h2.Driver.connect(Driver.java:72)
+ at java.sql.DriverManager.getConnection(DriverManager.java:571)
+ at java.sql.DriverManager.getConnection(DriverManager.java:215)
+ at eu.etaxonomy.cdm.database.CdmDataSourceBase.testConnection(CdmDataSourceBase.java:93)
+ at eu.etaxonomy.cdm.database.CdmPersistentDataSource.testConnection(CdmPersistentDataSource.java:51)
+ at eu.etaxonomy.cdm.database.CdmDataSourceBase.checkConnection(CdmDataSourceBase.java:110)
+ at eu.etaxonomy.cdm.database.CdmPersistentDataSource.checkConnection(CdmPersistentDataSource.java:51)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.checkDatabaseReachable(CdmStoreConnector.java:253)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.run(CdmStoreConnector.java:69)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+
+org.h2.message.DbException: The connection was not closed by the application and is garbage collected [90018-170]
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.message.DbException.get(DbException.java:135)
+ at org.h2.jdbc.JdbcConnection.closeOld(JdbcConnection.java:175)
+ at org.h2.jdbc.JdbcConnection.<init>(JdbcConnection.java:120)
+ at org.h2.jdbc.JdbcConnection.<init>(JdbcConnection.java:93)
+ at org.h2.Driver.connect(Driver.java:72)
+ at org.apache.commons.dbcp.DriverConnectionFactory.createConnection(DriverConnectionFactory.java:38)
+ at org.apache.commons.dbcp.PoolableConnectionFactory.makeObject(PoolableConnectionFactory.java:582)
+ at org.apache.commons.dbcp.BasicDataSource.validateConnectionFactory(BasicDataSource.java:1556)
+ at org.apache.commons.dbcp.BasicDataSource.createPoolableConnectionFactory(BasicDataSource.java:1545)
+ at org.apache.commons.dbcp.BasicDataSource.createDataSource(BasicDataSource.java:1388)
+ at eu.etaxonomy.cdm.database.LocalH2.createDataSource(LocalH2.java:88)
+ at org.apache.commons.dbcp.BasicDataSource.getConnection(BasicDataSource.java:1044)
+ at org.hibernate.service.jdbc.connections.internal.DatasourceConnectionProviderImpl.getConnection(DatasourceConnectionProviderImpl.java:141)
+ at org.hibernate.engine.jdbc.internal.JdbcServicesImpl$ConnectionProviderJdbcConnectionAccess.obtainConnection(JdbcServicesImpl.java:242)
+ at org.hibernate.engine.jdbc.internal.JdbcServicesImpl.configure(JdbcServicesImpl.java:117)
+ at org.hibernate.service.internal.StandardServiceRegistryImpl.configureService(StandardServiceRegistryImpl.java:75)
+ at org.hibernate.service.internal.AbstractServiceRegistryImpl.initializeService(AbstractServiceRegistryImpl.java:159)
+ at org.hibernate.service.internal.AbstractServiceRegistryImpl.getService(AbstractServiceRegistryImpl.java:131)
+ at org.hibernate.cfg.SettingsFactory.buildSettings(SettingsFactory.java:77)
+ at org.hibernate.cfg.Configuration.buildSettingsInternal(Configuration.java:2276)
+ at org.hibernate.cfg.Configuration.buildSettings(Configuration.java:2272)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1741)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1781)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBuilder.buildSessionFactory(LocalSessionFactoryBuilder.java:247)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.buildSessionFactory(LocalSessionFactoryBean.java:373)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.afterPropertiesSet(LocalSessionFactoryBean.java:358)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1547)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1485)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:524)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:323)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:107)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1393)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1134)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:522)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:626)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.preInstantiateSingletons(MonitoredListableBeanFactory.java:71)
+ at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:932)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.finishBeanFactoryInitialization(MonitoredGenericApplicationContext.java:74)
+ at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:479)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.refresh(MonitoredGenericApplicationContext.java:102)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.setNewDataSource(CdmApplicationController.java:264)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.<init>(CdmApplicationController.java:204)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.NewInstance(CdmApplicationController.java:148)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.getApplicationController(CdmStoreConnector.java:151)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.run(CdmStoreConnector.java:99)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+Caused by: org.h2.jdbc.JdbcSQLException: The connection was not closed by the application and is garbage collected [90018-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ ... 60 more
+06-15 17:38:06 jdbc[7]: java.lang.Exception: Open Stack Trace
+ at org.h2.util.CloseWatcher.register(CloseWatcher.java:99)
+ at org.h2.jdbc.JdbcConnection.<init>(JdbcConnection.java:121)
+ at org.h2.jdbc.JdbcConnection.<init>(JdbcConnection.java:93)
+ at org.h2.Driver.connect(Driver.java:72)
+ at java.sql.DriverManager.getConnection(DriverManager.java:571)
+ at java.sql.DriverManager.getConnection(DriverManager.java:215)
+ at eu.etaxonomy.cdm.database.CdmDataSourceBase.testConnection(CdmDataSourceBase.java:93)
+ at eu.etaxonomy.cdm.database.CdmPersistentDataSource.testConnection(CdmPersistentDataSource.java:51)
+ at eu.etaxonomy.cdm.database.CdmDataSourceBase.checkConnection(CdmDataSourceBase.java:110)
+ at eu.etaxonomy.cdm.database.CdmPersistentDataSource.checkConnection(CdmPersistentDataSource.java:51)
+ at eu.etaxonomy.taxeditor.view.datasource.CdmMetaDataAwareDataSourceContainer.getMetaDataFromDataSource(CdmMetaDataAwareDataSourceContainer.java:72)
+ at eu.etaxonomy.taxeditor.view.datasource.CdmDataSourceViewPart$DataSourceJob.run(CdmDataSourceViewPart.java:140)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+
+org.h2.message.DbException: The connection was not closed by the application and is garbage collected [90018-170]
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.message.DbException.get(DbException.java:135)
+ at org.h2.jdbc.JdbcConnection.closeOld(JdbcConnection.java:175)
+ at org.h2.jdbc.JdbcConnection.<init>(JdbcConnection.java:120)
+ at org.h2.jdbc.JdbcConnection.<init>(JdbcConnection.java:93)
+ at org.h2.Driver.connect(Driver.java:72)
+ at org.apache.commons.dbcp.DriverConnectionFactory.createConnection(DriverConnectionFactory.java:38)
+ at org.apache.commons.dbcp.PoolableConnectionFactory.makeObject(PoolableConnectionFactory.java:582)
+ at org.apache.commons.dbcp.BasicDataSource.validateConnectionFactory(BasicDataSource.java:1556)
+ at org.apache.commons.dbcp.BasicDataSource.createPoolableConnectionFactory(BasicDataSource.java:1545)
+ at org.apache.commons.dbcp.BasicDataSource.createDataSource(BasicDataSource.java:1388)
+ at eu.etaxonomy.cdm.database.LocalH2.createDataSource(LocalH2.java:88)
+ at org.apache.commons.dbcp.BasicDataSource.getConnection(BasicDataSource.java:1044)
+ at org.hibernate.service.jdbc.connections.internal.DatasourceConnectionProviderImpl.getConnection(DatasourceConnectionProviderImpl.java:141)
+ at org.hibernate.engine.jdbc.internal.JdbcServicesImpl$ConnectionProviderJdbcConnectionAccess.obtainConnection(JdbcServicesImpl.java:242)
+ at org.hibernate.engine.jdbc.internal.JdbcServicesImpl.configure(JdbcServicesImpl.java:117)
+ at org.hibernate.service.internal.StandardServiceRegistryImpl.configureService(StandardServiceRegistryImpl.java:75)
+ at org.hibernate.service.internal.AbstractServiceRegistryImpl.initializeService(AbstractServiceRegistryImpl.java:159)
+ at org.hibernate.service.internal.AbstractServiceRegistryImpl.getService(AbstractServiceRegistryImpl.java:131)
+ at org.hibernate.cfg.SettingsFactory.buildSettings(SettingsFactory.java:77)
+ at org.hibernate.cfg.Configuration.buildSettingsInternal(Configuration.java:2276)
+ at org.hibernate.cfg.Configuration.buildSettings(Configuration.java:2272)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1741)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1781)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBuilder.buildSessionFactory(LocalSessionFactoryBuilder.java:247)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.buildSessionFactory(LocalSessionFactoryBean.java:373)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.afterPropertiesSet(LocalSessionFactoryBean.java:358)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1547)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1485)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:524)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:323)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:107)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1393)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1134)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:522)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:626)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.preInstantiateSingletons(MonitoredListableBeanFactory.java:71)
+ at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:932)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.finishBeanFactoryInitialization(MonitoredGenericApplicationContext.java:74)
+ at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:479)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.refresh(MonitoredGenericApplicationContext.java:102)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.setNewDataSource(CdmApplicationController.java:264)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.<init>(CdmApplicationController.java:204)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.NewInstance(CdmApplicationController.java:148)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.getApplicationController(CdmStoreConnector.java:151)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.run(CdmStoreConnector.java:99)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+Caused by: org.h2.jdbc.JdbcSQLException: The connection was not closed by the application and is garbage collected [90018-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ ... 60 more
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "ADDRESS" not found; SQL statement:
+alter table Address drop constraint FK1ED033D44FF2DB2C [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "ADDRESS" not found; SQL statement:
+alter table Address drop constraint FK1ED033D4BC5DA539 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "ADDRESS" not found; SQL statement:
+alter table Address drop constraint FK1ED033D4CDD3C17E [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "ADDRESS" not found; SQL statement:
+alter table Address drop constraint FK1ED033D4132A2FE8 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "ADDRESS_AUD" not found; SQL statement:
+alter table Address_AUD drop constraint FK115657A534869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AGENTBASE" not found; SQL statement:
+alter table AgentBase drop constraint FK1205D3564FF2DB2C [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AGENTBASE" not found; SQL statement:
+alter table AgentBase drop constraint FK1205D356BC5DA539 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AGENTBASE" not found; SQL statement:
+alter table AgentBase drop constraint FK1205D356A830578 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AGENTBASE_AUD" not found; SQL statement:
+alter table AgentBase_AUD drop constraint FK29CC662734869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AGENTBASE_ADDRESS" not found; SQL statement:
+alter table AgentBase_Address drop constraint FK1EDFF7EB50751EC5 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AGENTBASE_ADDRESS" not found; SQL statement:
+alter table AgentBase_Address drop constraint FK1EDFF7EB86EFC5D4 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AGENTBASE_ADDRESS_AUD" not found; SQL statement:
+alter table AgentBase_Address_AUD drop constraint FK3D28383C34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AGENTBASE_AGENTBASE" not found; SQL statement:
+alter table AgentBase_AgentBase drop constraint FK4D34EDADE9E535F9 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AGENTBASE_AGENTBASE" not found; SQL statement:
+alter table AgentBase_AgentBase drop constraint FK4D34EDAD1C0E9907 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AGENTBASE_AGENTBASE_AUD" not found; SQL statement:
+alter table AgentBase_AgentBase_AUD drop constraint FKA8A87CFE34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AGENTBASE_ANNOTATION" not found; SQL statement:
+alter table AgentBase_Annotation drop constraint FK44D5F7D81E403E0B [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AGENTBASE_ANNOTATION" not found; SQL statement:
+alter table AgentBase_Annotation drop constraint FK44D5F7D886EFC5D4 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AGENTBASE_ANNOTATION_AUD" not found; SQL statement:
+alter table AgentBase_Annotation_AUD drop constraint FK771279A934869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AGENTBASE_CREDIT" not found; SQL statement:
+alter table AgentBase_Credit drop constraint FK2636742232D1B9F [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AGENTBASE_CREDIT" not found; SQL statement:
+alter table AgentBase_Credit drop constraint FK2636742286EFC5D4 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AGENTBASE_CREDIT_AUD" not found; SQL statement:
+alter table AgentBase_Credit_AUD drop constraint FK7FE7C0F334869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AGENTBASE_DEFINEDTERMBASE" not found; SQL statement:
+alter table AgentBase_DefinedTermBase drop constraint FK6665C77DF116FEB0 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AGENTBASE_DEFINEDTERMBASE" not found; SQL statement:
+alter table AgentBase_DefinedTermBase drop constraint FK6665C77D8D9AB196 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AGENTBASE_DEFINEDTERMBASE_AUD" not found; SQL statement:
+alter table AgentBase_DefinedTermBase_AUD drop constraint FKA737EECE34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AGENTBASE_EXTENSION" not found; SQL statement:
+alter table AgentBase_Extension drop constraint FK8E1E5676927DE9DF [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AGENTBASE_EXTENSION" not found; SQL statement:
+alter table AgentBase_Extension drop constraint FK8E1E567686EFC5D4 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AGENTBASE_EXTENSION_AUD" not found; SQL statement:
+alter table AgentBase_Extension_AUD drop constraint FK11AE594734869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AGENTBASE_IDENTIFIER" not found; SQL statement:
+alter table AgentBase_Identifier drop constraint FK410EB952E12073FF [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AGENTBASE_IDENTIFIER" not found; SQL statement:
+alter table AgentBase_Identifier drop constraint FK410EB95286EFC5D4 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AGENTBASE_IDENTIFIER_AUD" not found; SQL statement:
+alter table AgentBase_Identifier_AUD drop constraint FK3DB9EE2334869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AGENTBASE_MARKER" not found; SQL statement:
+alter table AgentBase_Marker drop constraint FK365D5D63777265A1 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AGENTBASE_MARKER" not found; SQL statement:
+alter table AgentBase_Marker drop constraint FK365D5D6386EFC5D4 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AGENTBASE_MARKER_AUD" not found; SQL statement:
+alter table AgentBase_Marker_AUD drop constraint FKE40621B434869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AGENTBASE_MEDIA" not found; SQL statement:
+alter table AgentBase_Media drop constraint FKE8FC5D9BC2C29593 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AGENTBASE_MEDIA" not found; SQL statement:
+alter table AgentBase_Media drop constraint FKE8FC5D9B86EFC5D4 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AGENTBASE_MEDIA_AUD" not found; SQL statement:
+alter table AgentBase_Media_AUD drop constraint FK323A45EC34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AGENTBASE_ORIGINALSOURCEBASE" not found; SQL statement:
+alter table AgentBase_OriginalSourceBase drop constraint FKB482C5E63A6735D9 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AGENTBASE_ORIGINALSOURCEBASE" not found; SQL statement:
+alter table AgentBase_OriginalSourceBase drop constraint FKB482C5E686EFC5D4 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AGENTBASE_ORIGINALSOURCEBASE_AUD" not found; SQL statement:
+alter table AgentBase_OriginalSourceBase_AUD drop constraint FK886D90B734869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AGENTBASE_RIGHTSINFO" not found; SQL statement:
+alter table AgentBase_RightsInfo drop constraint FK4FD6A3CEC13F7B21 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AGENTBASE_RIGHTSINFO" not found; SQL statement:
+alter table AgentBase_RightsInfo drop constraint FK4FD6A3CE86EFC5D4 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AGENTBASE_RIGHTSINFO_AUD" not found; SQL statement:
+alter table AgentBase_RightsInfo_AUD drop constraint FK79503A9F34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AGENTBASE_CONTACT_EMAILADDRESSES" not found; SQL statement:
+alter table AgentBase_contact_emailaddresses drop constraint FK4BD2B08E86EFC5D4 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AGENTBASE_CONTACT_EMAILADDRESSES_AUD" not found; SQL statement:
+alter table AgentBase_contact_emailaddresses_AUD drop constraint FKCAF7E75F34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AGENTBASE_CONTACT_FAXNUMBERS" not found; SQL statement:
+alter table AgentBase_contact_faxnumbers drop constraint FK52E1AD9586EFC5D4 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AGENTBASE_CONTACT_FAXNUMBERS_AUD" not found; SQL statement:
+alter table AgentBase_contact_faxnumbers_AUD drop constraint FK88A308E634869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AGENTBASE_CONTACT_PHONENUMBERS" not found; SQL statement:
+alter table AgentBase_contact_phonenumbers drop constraint FKC171CC2486EFC5D4 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AGENTBASE_CONTACT_PHONENUMBERS_AUD" not found; SQL statement:
+alter table AgentBase_contact_phonenumbers_AUD drop constraint FKDDD347F534869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AGENTBASE_CONTACT_URLS" not found; SQL statement:
+alter table AgentBase_contact_urls drop constraint FK9A9643EC86EFC5D4 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AGENTBASE_CONTACT_URLS_AUD" not found; SQL statement:
+alter table AgentBase_contact_urls_AUD drop constraint FK1CE69BBD34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AMPLIFICATION" not found; SQL statement:
+alter table Amplification drop constraint FK9DA6B4164FF2DB2C [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AMPLIFICATION" not found; SQL statement:
+alter table Amplification drop constraint FK9DA6B416BC5DA539 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AMPLIFICATION" not found; SQL statement:
+alter table Amplification drop constraint FK9DA6B4163DA462D5 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AMPLIFICATION" not found; SQL statement:
+alter table Amplification drop constraint FK9DA6B4166D2CE418 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AMPLIFICATION" not found; SQL statement:
+alter table Amplification drop constraint FK9DA6B4163781DA30 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AMPLIFICATION" not found; SQL statement:
+alter table Amplification drop constraint FK9DA6B416403E17F4 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AMPLIFICATION" not found; SQL statement:
+alter table Amplification drop constraint FK9DA6B416AFCA96F8 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AMPLIFICATION" not found; SQL statement:
+alter table Amplification drop constraint FK9DA6B4161600EAB3 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AMPLIFICATIONRESULT" not found; SQL statement:
+alter table AmplificationResult drop constraint FK484B7FD34FF2DB2C [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AMPLIFICATIONRESULT" not found; SQL statement:
+alter table AmplificationResult drop constraint FK484B7FD3BC5DA539 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AMPLIFICATIONRESULT" not found; SQL statement:
+alter table AmplificationResult drop constraint FK484B7FD3614CEB1F [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AMPLIFICATIONRESULT" not found; SQL statement:
+alter table AmplificationResult drop constraint FK484B7FD3DEC4385F [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AMPLIFICATIONRESULT" not found; SQL statement:
+alter table AmplificationResult drop constraint FK484B7FD3E671A9DF [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AMPLIFICATIONRESULT" not found; SQL statement:
+alter table AmplificationResult drop constraint FK484B7FD3825BDDD3 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AMPLIFICATIONRESULT_AUD" not found; SQL statement:
+alter table AmplificationResult_AUD drop constraint FK343D8C2434869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AMPLIFICATIONRESULT_ANNOTATION" not found; SQL statement:
+alter table AmplificationResult_Annotation drop constraint FKFE4A8B3B1E403E0B [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AMPLIFICATIONRESULT_ANNOTATION" not found; SQL statement:
+alter table AmplificationResult_Annotation drop constraint FKFE4A8B3BD320A65F [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AMPLIFICATIONRESULT_ANNOTATION_AUD" not found; SQL statement:
+alter table AmplificationResult_Annotation_AUD drop constraint FK7378A38C34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AMPLIFICATIONRESULT_MARKER" not found; SQL statement:
+alter table AmplificationResult_Marker drop constraint FK5B911A46777265A1 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AMPLIFICATIONRESULT_MARKER" not found; SQL statement:
+alter table AmplificationResult_Marker drop constraint FK5B911A46D320A65F [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AMPLIFICATIONRESULT_MARKER_AUD" not found; SQL statement:
+alter table AmplificationResult_Marker_AUD drop constraint FK9D7AB51734869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AMPLIFICATION_AUD" not found; SQL statement:
+alter table Amplification_AUD drop constraint FK448EE6E734869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AMPLIFICATION_ANNOTATION" not found; SQL statement:
+alter table Amplification_Annotation drop constraint FK6B251F181E403E0B [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AMPLIFICATION_ANNOTATION" not found; SQL statement:
+alter table Amplification_Annotation drop constraint FK6B251F18614CEB1F [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AMPLIFICATION_ANNOTATION_AUD" not found; SQL statement:
+alter table Amplification_Annotation_AUD drop constraint FK6FC00E934869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AMPLIFICATION_MARKER" not found; SQL statement:
+alter table Amplification_Marker drop constraint FK46E224A3777265A1 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AMPLIFICATION_MARKER" not found; SQL statement:
+alter table Amplification_Marker drop constraint FK46E224A3614CEB1F [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "AMPLIFICATION_MARKER_AUD" not found; SQL statement:
+alter table Amplification_Marker_AUD drop constraint FKA5548F434869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "ANNOTATION" not found; SQL statement:
+alter table Annotation drop constraint FK1A21C74F4FF2DB2C [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "ANNOTATION" not found; SQL statement:
+alter table Annotation drop constraint FK1A21C74FBC5DA539 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "ANNOTATION" not found; SQL statement:
+alter table Annotation drop constraint FK1A21C74FE8D36B00 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "ANNOTATION" not found; SQL statement:
+alter table Annotation drop constraint FK1A21C74FDF299D00 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "ANNOTATION" not found; SQL statement:
+alter table Annotation drop constraint FK1A21C74FE7692740 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "ANNOTATION_AUD" not found; SQL statement:
+alter table Annotation_AUD drop constraint FK1A6BB5A034869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "ANNOTATION_ANNOTATION" not found; SQL statement:
+alter table Annotation_Annotation drop constraint FKC99DFE3F1E403E0B [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "ANNOTATION_ANNOTATION" not found; SQL statement:
+alter table Annotation_Annotation drop constraint FKC99DFE3F994CCE20 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "ANNOTATION_ANNOTATION_AUD" not found; SQL statement:
+alter table Annotation_Annotation_AUD drop constraint FKB212F49034869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "ANNOTATION_MARKER" not found; SQL statement:
+alter table Annotation_Marker drop constraint FKB17EAF4A777265A1 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "ANNOTATION_MARKER" not found; SQL statement:
+alter table Annotation_Marker drop constraint FKB17EAF4A994CCE20 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "ANNOTATION_MARKER_AUD" not found; SQL statement:
+alter table Annotation_Marker_AUD drop constraint FK68CE281B34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "CDMMETADATA" not found; SQL statement:
+alter table CdmMetaData drop constraint FK6EA78F7B4FF2DB2C [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "CLASSIFICATION" not found; SQL statement:
+alter table Classification drop constraint FKDB1100064FF2DB2C [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "CLASSIFICATION" not found; SQL statement:
+alter table Classification drop constraint FKDB110006BC5DA539 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "CLASSIFICATION" not found; SQL statement:
+alter table Classification drop constraint FKDB11000677E2F09E [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "CLASSIFICATION" not found; SQL statement:
+alter table Classification drop constraint FKDB1100068D0FB4DA [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "CLASSIFICATION" not found; SQL statement:
+alter table Classification drop constraint FKDB110006D1E08681 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "CLASSIFICATION_AUD" not found; SQL statement:
+alter table Classification_AUD drop constraint FKEB11BAD734869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "CLASSIFICATION_ANNOTATION" not found; SQL statement:
+alter table Classification_Annotation drop constraint FKC978FD281E403E0B [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "CLASSIFICATION_ANNOTATION" not found; SQL statement:
+alter table Classification_Annotation drop constraint FKC978FD2884A3CE1B [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "CLASSIFICATION_ANNOTATION_AUD" not found; SQL statement:
+alter table Classification_Annotation_AUD drop constraint FK3D1256F934869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "CLASSIFICATION_CREDIT" not found; SQL statement:
+alter table Classification_Credit drop constraint FK4950A17232D1B9F [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "CLASSIFICATION_CREDIT" not found; SQL statement:
+alter table Classification_Credit drop constraint FK4950A17284A3CE1B [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "CLASSIFICATION_CREDIT_AUD" not found; SQL statement:
+alter table Classification_Credit_AUD drop constraint FK48AC64334869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "CLASSIFICATION_DESCRIPTION" not found; SQL statement:
+alter table Classification_Description drop constraint FK382EB1232BEBA58D [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "CLASSIFICATION_DESCRIPTION" not found; SQL statement:
+alter table Classification_Description drop constraint FK382EB12328459272 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "CLASSIFICATION_DESCRIPTION" not found; SQL statement:
+alter table Classification_Description drop constraint FK382EB12384A3CE1B [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "CLASSIFICATION_DESCRIPTION_AUD" not found; SQL statement:
+alter table Classification_Description_AUD drop constraint FK3187957434869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "CLASSIFICATION_EXTENSION" not found; SQL statement:
+alter table Classification_Extension drop constraint FK715D6726927DE9DF [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "CLASSIFICATION_EXTENSION" not found; SQL statement:
+alter table Classification_Extension drop constraint FK715D672684A3CE1B [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "CLASSIFICATION_EXTENSION_AUD" not found; SQL statement:
+alter table Classification_Extension_AUD drop constraint FK289591F734869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "CLASSIFICATION_GEOSCOPE" not found; SQL statement:
+alter table Classification_GeoScope drop constraint FK379FE5BC86D04E74 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "CLASSIFICATION_GEOSCOPE" not found; SQL statement:
+alter table Classification_GeoScope drop constraint FK379FE5BC84A3CE1B [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "CLASSIFICATION_GEOSCOPE_AUD" not found; SQL statement:
+alter table Classification_GeoScope_AUD drop constraint FKF5AAD58D34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "CLASSIFICATION_IDENTIFIER" not found; SQL statement:
+alter table Classification_Identifier drop constraint FKC5B1BEA2E12073FF [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "CLASSIFICATION_IDENTIFIER" not found; SQL statement:
+alter table Classification_Identifier drop constraint FKC5B1BEA284A3CE1B [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "CLASSIFICATION_IDENTIFIER_AUD" not found; SQL statement:
+alter table Classification_Identifier_AUD drop constraint FK3B9CB7334869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "CLASSIFICATION_MARKER" not found; SQL statement:
+alter table Classification_Marker drop constraint FK59778AB3777265A1 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "CLASSIFICATION_MARKER" not found; SQL statement:
+alter table Classification_Marker drop constraint FK59778AB384A3CE1B [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "CLASSIFICATION_MARKER_AUD" not found; SQL statement:
+alter table Classification_Marker_AUD drop constraint FK68A9270434869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "CLASSIFICATION_ORIGINALSOURCEBASE" not found; SQL statement:
+alter table Classification_OriginalSourceBase drop constraint FK91B37B363A6735D9 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "CLASSIFICATION_ORIGINALSOURCEBASE" not found; SQL statement:
+alter table Classification_OriginalSourceBase drop constraint FK91B37B3684A3CE1B [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "CLASSIFICATION_ORIGINALSOURCEBASE_AUD" not found; SQL statement:
+alter table Classification_OriginalSourceBase_AUD drop constraint FK48A31E0734869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "CLASSIFICATION_RIGHTSINFO" not found; SQL statement:
+alter table Classification_RightsInfo drop constraint FKD479A91EC13F7B21 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "CLASSIFICATION_RIGHTSINFO" not found; SQL statement:
+alter table Classification_RightsInfo drop constraint FKD479A91E84A3CE1B [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "CLASSIFICATION_RIGHTSINFO_AUD" not found; SQL statement:
+alter table Classification_RightsInfo_AUD drop constraint FK3F5017EF34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "COLLECTION" not found; SQL statement:
+alter table Collection drop constraint FKF078ABE4FF2DB2C [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "COLLECTION" not found; SQL statement:
+alter table Collection drop constraint FKF078ABEBC5DA539 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "COLLECTION" not found; SQL statement:
+alter table Collection drop constraint FKF078ABE16B9CA77 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "COLLECTION" not found; SQL statement:
+alter table Collection drop constraint FKF078ABECEB38EFF [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "COLLECTION_AUD" not found; SQL statement:
+alter table Collection_AUD drop constraint FKD6D4298F34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "COLLECTION_ANNOTATION" not found; SQL statement:
+alter table Collection_Annotation drop constraint FKEA970F701E403E0B [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "COLLECTION_ANNOTATION" not found; SQL statement:
+alter table Collection_Annotation drop constraint FKEA970F70EB62BE9A [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "COLLECTION_ANNOTATION_AUD" not found; SQL statement:
+alter table Collection_Annotation_AUD drop constraint FKA0CE054134869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "COLLECTION_CREDIT" not found; SQL statement:
+alter table Collection_Credit drop constraint FKE0A317BA32D1B9F [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "COLLECTION_CREDIT" not found; SQL statement:
+alter table Collection_Credit drop constraint FKE0A317BAEB62BE9A [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "COLLECTION_CREDIT_AUD" not found; SQL statement:
+alter table Collection_Credit_AUD drop constraint FK25A8D88B34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "COLLECTION_EXTENSION" not found; SQL statement:
+alter table Collection_Extension drop constraint FKF68FEBDE927DE9DF [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "COLLECTION_EXTENSION" not found; SQL statement:
+alter table Collection_Extension drop constraint FKF68FEBDEEB62BE9A [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "COLLECTION_EXTENSION_AUD" not found; SQL statement:
+alter table Collection_Extension_AUD drop constraint FK1306FAAF34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "COLLECTION_IDENTIFIER" not found; SQL statement:
+alter table Collection_Identifier drop constraint FKE6CFD0EAE12073FF [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "COLLECTION_IDENTIFIER" not found; SQL statement:
+alter table Collection_Identifier drop constraint FKE6CFD0EAEB62BE9A [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "COLLECTION_IDENTIFIER_AUD" not found; SQL statement:
+alter table Collection_Identifier_AUD drop constraint FK677579BB34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "COLLECTION_MARKER" not found; SQL statement:
+alter table Collection_Marker drop constraint FKF0CA00FB777265A1 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "COLLECTION_MARKER" not found; SQL statement:
+alter table Collection_Marker drop constraint FKF0CA00FBEB62BE9A [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "COLLECTION_MARKER_AUD" not found; SQL statement:
+alter table Collection_Marker_AUD drop constraint FK89C7394C34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "COLLECTION_MEDIA" not found; SQL statement:
+alter table Collection_Media drop constraint FK7320E703C2C29593 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "COLLECTION_MEDIA" not found; SQL statement:
+alter table Collection_Media drop constraint FK7320E703EB62BE9A [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "COLLECTION_MEDIA_AUD" not found; SQL statement:
+alter table Collection_Media_AUD drop constraint FK9AABDB5434869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "COLLECTION_ORIGINALSOURCEBASE" not found; SQL statement:
+alter table Collection_OriginalSourceBase drop constraint FK37DEC57E3A6735D9 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "COLLECTION_ORIGINALSOURCEBASE" not found; SQL statement:
+alter table Collection_OriginalSourceBase drop constraint FK37DEC57EEB62BE9A [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "COLLECTION_ORIGINALSOURCEBASE_AUD" not found; SQL statement:
+alter table Collection_OriginalSourceBase_AUD drop constraint FKF810044F34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "COLLECTION_RIGHTSINFO" not found; SQL statement:
+alter table Collection_RightsInfo drop constraint FKF597BB66C13F7B21 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "COLLECTION_RIGHTSINFO" not found; SQL statement:
+alter table Collection_RightsInfo drop constraint FKF597BB66EB62BE9A [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "COLLECTION_RIGHTSINFO_AUD" not found; SQL statement:
+alter table Collection_RightsInfo_AUD drop constraint FKA30BC63734869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "CREDIT" not found; SQL statement:
+alter table Credit drop constraint FK78CA97194FF2DB2C [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "CREDIT" not found; SQL statement:
+alter table Credit drop constraint FK78CA9719BC5DA539 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "CREDIT" not found; SQL statement:
+alter table Credit drop constraint FK78CA9719E8D36B00 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "CREDIT" not found; SQL statement:
+alter table Credit drop constraint FK78CA9719F7976FC5 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "CREDIT_AUD" not found; SQL statement:
+alter table Credit_AUD drop constraint FK5533906A34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "CREDIT_ANNOTATION" not found; SQL statement:
+alter table Credit_Annotation drop constraint FKE8DA4C351E403E0B [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "CREDIT_ANNOTATION" not found; SQL statement:
+alter table Credit_Annotation drop constraint FKE8DA4C354CF694E0 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "CREDIT_ANNOTATION_AUD" not found; SQL statement:
+alter table Credit_Annotation_AUD drop constraint FK1DEB578634869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "CREDIT_MARKER" not found; SQL statement:
+alter table Credit_Marker drop constraint FK10CC6840777265A1 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "CREDIT_MARKER" not found; SQL statement:
+alter table Credit_Marker drop constraint FK10CC68404CF694E0 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "CREDIT_MARKER_AUD" not found; SQL statement:
+alter table Credit_Marker_AUD drop constraint FK880A761134869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DEFINEDTERMBASE" not found; SQL statement:
+alter table DefinedTermBase drop constraint FK2E340A664FF2DB2C [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DEFINEDTERMBASE" not found; SQL statement:
+alter table DefinedTermBase drop constraint FK2E340A66BC5DA539 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DEFINEDTERMBASE" not found; SQL statement:
+alter table DefinedTermBase drop constraint FK2E340A663B0DA0EF [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DEFINEDTERMBASE" not found; SQL statement:
+alter table DefinedTermBase drop constraint FK2E340A66D040DBF0 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DEFINEDTERMBASE" not found; SQL statement:
+alter table DefinedTermBase drop constraint FK2E340A6647AF954C [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DEFINEDTERMBASE" not found; SQL statement:
+alter table DefinedTermBase drop constraint FK2E340A6624AF3F70 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DEFINEDTERMBASE" not found; SQL statement:
+alter table DefinedTermBase drop constraint FK2E340A6636C6F6F6 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DEFINEDTERMBASE" not found; SQL statement:
+alter table DefinedTermBase drop constraint FK2E340A66CC0240B6 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DEFINEDTERMBASE" not found; SQL statement:
+alter table DefinedTermBase drop constraint FK2E340A6688206484 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DEFINEDTERMBASE_AUD" not found; SQL statement:
+alter table DefinedTermBase_AUD drop constraint FK86E8953734869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DEFINEDTERMBASE_ANNOTATION" not found; SQL statement:
+alter table DefinedTermBase_Annotation drop constraint FK589B6C81E403E0B [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DEFINEDTERMBASE_ANNOTATION" not found; SQL statement:
+alter table DefinedTermBase_Annotation drop constraint FK589B6C8C0DB4934 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DEFINEDTERMBASE_ANNOTATION_AUD" not found; SQL statement:
+alter table DefinedTermBase_Annotation_AUD drop constraint FK28ED409934869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DEFINEDTERMBASE_CONTINENT" not found; SQL statement:
+alter table DefinedTermBase_Continent drop constraint FK45F60AFB9AEE7205 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DEFINEDTERMBASE_CONTINENT" not found; SQL statement:
+alter table DefinedTermBase_Continent drop constraint FK45F60AFB901A60CE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DEFINEDTERMBASE_CONTINENT_AUD" not found; SQL statement:
+alter table DefinedTermBase_Continent_AUD drop constraint FKF5DE434C34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DEFINEDTERMBASE_COUNTRY" not found; SQL statement:
+alter table DefinedTermBase_Country drop constraint FKA2ADDA9D47CE41A0 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DEFINEDTERMBASE_COUNTRY" not found; SQL statement:
+alter table DefinedTermBase_Country drop constraint FKA2ADDA9DCE5C0F9E [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DEFINEDTERMBASE_COUNTRY_AUD" not found; SQL statement:
+alter table DefinedTermBase_Country_AUD drop constraint FK8D0171EE34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DEFINEDTERMBASE_CREDIT" not found; SQL statement:
+alter table DefinedTermBase_Credit drop constraint FK78FF2B1232D1B9F [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DEFINEDTERMBASE_CREDIT" not found; SQL statement:
+alter table DefinedTermBase_Credit drop constraint FK78FF2B12C0DB4934 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DEFINEDTERMBASE_CREDIT_AUD" not found; SQL statement:
+alter table DefinedTermBase_Credit_AUD drop constraint FK409B7FE334869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DEFINEDTERMBASE_EXTENSION" not found; SQL statement:
+alter table DefinedTermBase_Extension drop constraint FK397EF986927DE9DF [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DEFINEDTERMBASE_EXTENSION" not found; SQL statement:
+alter table DefinedTermBase_Extension drop constraint FK397EF986C0DB4934 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DEFINEDTERMBASE_EXTENSION_AUD" not found; SQL statement:
+alter table DefinedTermBase_Extension_AUD drop constraint FK6E6F45734869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DEFINEDTERMBASE_IDENTIFIER" not found; SQL statement:
+alter table DefinedTermBase_Identifier drop constraint FK1C27842E12073FF [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DEFINEDTERMBASE_IDENTIFIER" not found; SQL statement:
+alter table DefinedTermBase_Identifier drop constraint FK1C27842C0DB4934 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DEFINEDTERMBASE_IDENTIFIER_AUD" not found; SQL statement:
+alter table DefinedTermBase_Identifier_AUD drop constraint FKEF94B51334869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DEFINEDTERMBASE_MARKER" not found; SQL statement:
+alter table DefinedTermBase_Marker drop constraint FK89261453777265A1 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DEFINEDTERMBASE_MARKER" not found; SQL statement:
+alter table DefinedTermBase_Marker drop constraint FK89261453C0DB4934 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DEFINEDTERMBASE_MARKER_AUD" not found; SQL statement:
+alter table DefinedTermBase_Marker_AUD drop constraint FKA4B9E0A434869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DEFINEDTERMBASE_MEASUREMENTUNIT" not found; SQL statement:
+alter table DefinedTermBase_MeasurementUnit drop constraint FKE9D17767F3BB39BD [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DEFINEDTERMBASE_MEASUREMENTUNIT" not found; SQL statement:
+alter table DefinedTermBase_MeasurementUnit drop constraint FKE9D17767D0BDAE9B [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DEFINEDTERMBASE_MEASUREMENTUNIT_AUD" not found; SQL statement:
+alter table DefinedTermBase_MeasurementUnit_AUD drop constraint FK2C1599B834869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DEFINEDTERMBASE_MEDIA" not found; SQL statement:
+alter table DefinedTermBase_Media drop constraint FK6FC908ABC2C29593 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DEFINEDTERMBASE_MEDIA" not found; SQL statement:
+alter table DefinedTermBase_Media drop constraint FK6FC908ABC0DB4934 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DEFINEDTERMBASE_MEDIA_AUD" not found; SQL statement:
+alter table DefinedTermBase_Media_AUD drop constraint FKDD9AE8FC34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DEFINEDTERMBASE_ORIGINALSOURCEBASE" not found; SQL statement:
+alter table DefinedTermBase_OriginalSourceBase drop constraint FKDCC094D63A6735D9 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DEFINEDTERMBASE_ORIGINALSOURCEBASE" not found; SQL statement:
+alter table DefinedTermBase_OriginalSourceBase drop constraint FKDCC094D6C0DB4934 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DEFINEDTERMBASE_ORIGINALSOURCEBASE_AUD" not found; SQL statement:
+alter table DefinedTermBase_OriginalSourceBase_AUD drop constraint FKAE4A67A734869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DEFINEDTERMBASE_RECOMMENDEDMODIFIERENUMERATION" not found; SQL statement:
+alter table DefinedTermBase_RecommendedModifierEnumeration drop constraint FKA72FB5AE5255EAFD [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DEFINEDTERMBASE_RECOMMENDEDMODIFIERENUMERATION" not found; SQL statement:
+alter table DefinedTermBase_RecommendedModifierEnumeration drop constraint FKA72FB5AED0BDAE9B [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DEFINEDTERMBASE_RECOMMENDEDMODIFIERENUMERATION_AUD" not found; SQL statement:
+alter table DefinedTermBase_RecommendedModifierEnumeration_AUD drop constraint FK780D5C7F34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DEFINEDTERMBASE_REPRESENTATION" not found; SQL statement:
+alter table DefinedTermBase_Representation drop constraint FKAAC8AFE6B31C4747 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DEFINEDTERMBASE_REPRESENTATION" not found; SQL statement:
+alter table DefinedTermBase_Representation drop constraint FKAAC8AFE6C0DB4934 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DEFINEDTERMBASE_REPRESENTATION_AUD" not found; SQL statement:
+alter table DefinedTermBase_Representation_AUD drop constraint FKB5AE7AB734869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DEFINEDTERMBASE_RIGHTSINFO" not found; SQL statement:
+alter table DefinedTermBase_RightsInfo drop constraint FK108A62BEC13F7B21 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DEFINEDTERMBASE_RIGHTSINFO" not found; SQL statement:
+alter table DefinedTermBase_RightsInfo drop constraint FK108A62BEC0DB4934 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DEFINEDTERMBASE_RIGHTSINFO_AUD" not found; SQL statement:
+alter table DefinedTermBase_RightsInfo_AUD drop constraint FK2B2B018F34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DEFINEDTERMBASE_STATISTICALMEASURE" not found; SQL statement:
+alter table DefinedTermBase_StatisticalMeasure drop constraint FK6FF15DFCC9CD5B57 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DEFINEDTERMBASE_STATISTICALMEASURE" not found; SQL statement:
+alter table DefinedTermBase_StatisticalMeasure drop constraint FK6FF15DFCD0BDAE9B [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DEFINEDTERMBASE_STATISTICALMEASURE_AUD" not found; SQL statement:
+alter table DefinedTermBase_StatisticalMeasure_AUD drop constraint FK3C062DCD34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DEFINEDTERMBASE_SUPPORTEDCATEGORICALENUMERATION" not found; SQL statement:
+alter table DefinedTermBase_SupportedCategoricalEnumeration drop constraint FK2170B25C5AF2C74 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DEFINEDTERMBASE_SUPPORTEDCATEGORICALENUMERATION" not found; SQL statement:
+alter table DefinedTermBase_SupportedCategoricalEnumeration drop constraint FK2170B25CD0BDAE9B [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DEFINEDTERMBASE_SUPPORTEDCATEGORICALENUMERATION_AUD" not found; SQL statement:
+alter table DefinedTermBase_SupportedCategoricalEnumeration_AUD drop constraint FKBB04522D34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DERIVATIONEVENT" not found; SQL statement:
+alter table DerivationEvent drop constraint FK426BC034FF2DB2C [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DERIVATIONEVENT" not found; SQL statement:
+alter table DerivationEvent drop constraint FK426BC03BC5DA539 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DERIVATIONEVENT" not found; SQL statement:
+alter table DerivationEvent drop constraint FK426BC033DA462D5 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DERIVATIONEVENT" not found; SQL statement:
+alter table DerivationEvent drop constraint FK426BC03403E17F4 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DERIVATIONEVENT" not found; SQL statement:
+alter table DerivationEvent drop constraint FK426BC038524B89D [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DERIVATIONEVENT_AUD" not found; SQL statement:
+alter table DerivationEvent_AUD drop constraint FKDABF305434869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DERIVATIONEVENT_ANNOTATION" not found; SQL statement:
+alter table DerivationEvent_Annotation drop constraint FKEFA0D10B1E403E0B [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DERIVATIONEVENT_ANNOTATION" not found; SQL statement:
+alter table DerivationEvent_Annotation drop constraint FKEFA0D10B4AAB411A [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DERIVATIONEVENT_ANNOTATION_AUD" not found; SQL statement:
+alter table DerivationEvent_Annotation_AUD drop constraint FKA197815C34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DERIVATIONEVENT_MARKER" not found; SQL statement:
+alter table DerivationEvent_Marker drop constraint FKE412C816777265A1 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DERIVATIONEVENT_MARKER" not found; SQL statement:
+alter table DerivationEvent_Marker drop constraint FKE412C8164AAB411A [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DERIVATIONEVENT_MARKER_AUD" not found; SQL statement:
+alter table DerivationEvent_Marker_AUD drop constraint FK8ED0FAE734869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DESCRIPTIONBASE" not found; SQL statement:
+alter table DescriptionBase drop constraint FKFF4D58CD4FF2DB2C [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DESCRIPTIONBASE" not found; SQL statement:
+alter table DescriptionBase drop constraint FKFF4D58CDBC5DA539 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DESCRIPTIONBASE" not found; SQL statement:
+alter table DescriptionBase drop constraint FKFF4D58CDB56856A4 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DESCRIPTIONBASE" not found; SQL statement:
+alter table DescriptionBase drop constraint FKFF4D58CDDE9A3E39 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DESCRIPTIONBASE" not found; SQL statement:
+alter table DescriptionBase drop constraint FKFF4D58CDDA935185 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DESCRIPTIONBASE_AUD" not found; SQL statement:
+alter table DescriptionBase_AUD drop constraint FK7456581E34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DESCRIPTIONBASE_ANNOTATION" not found; SQL statement:
+alter table DescriptionBase_Annotation drop constraint FKF3AD32011E403E0B [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DESCRIPTIONBASE_ANNOTATION" not found; SQL statement:
+alter table DescriptionBase_Annotation drop constraint FKF3AD3201F1DDBFAB [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DESCRIPTIONBASE_ANNOTATION_AUD" not found; SQL statement:
+alter table DescriptionBase_Annotation_AUD drop constraint FK15FE775234869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DESCRIPTIONBASE_CREDIT" not found; SQL statement:
+alter table DescriptionBase_Credit drop constraint FK510B2ACB32D1B9F [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DESCRIPTIONBASE_CREDIT" not found; SQL statement:
+alter table DescriptionBase_Credit drop constraint FK510B2ACBF1DDBFAB [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DESCRIPTIONBASE_CREDIT_AUD" not found; SQL statement:
+alter table DescriptionBase_Credit_AUD drop constraint FK2EBEFB1C34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DESCRIPTIONBASE_EXTENSION" not found; SQL statement:
+alter table DescriptionBase_Extension drop constraint FKD5D2B32D927DE9DF [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DESCRIPTIONBASE_EXTENSION" not found; SQL statement:
+alter table DescriptionBase_Extension drop constraint FKD5D2B32DF1DDBFAB [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DESCRIPTIONBASE_EXTENSION_AUD" not found; SQL statement:
+alter table DescriptionBase_Extension_AUD drop constraint FK79E7827E34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DESCRIPTIONBASE_GEOSCOPE" not found; SQL statement:
+alter table DescriptionBase_GeoScope drop constraint FK3ADD7CD586D04E74 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DESCRIPTIONBASE_GEOSCOPE" not found; SQL statement:
+alter table DescriptionBase_GeoScope drop constraint FK3ADD7CD5D86445CE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DESCRIPTIONBASE_GEOSCOPE_AUD" not found; SQL statement:
+alter table DescriptionBase_GeoScope_AUD drop constraint FK63A5382634869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DESCRIPTIONBASE_IDENTIFIER" not found; SQL statement:
+alter table DescriptionBase_Identifier drop constraint FKEFE5F37BE12073FF [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DESCRIPTIONBASE_IDENTIFIER" not found; SQL statement:
+alter table DescriptionBase_Identifier drop constraint FKEFE5F37BF1DDBFAB [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DESCRIPTIONBASE_IDENTIFIER_AUD" not found; SQL statement:
+alter table DescriptionBase_Identifier_AUD drop constraint FKDCA5EBCC34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DESCRIPTIONBASE_MARKER" not found; SQL statement:
+alter table DescriptionBase_Marker drop constraint FK6132140C777265A1 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DESCRIPTIONBASE_MARKER" not found; SQL statement:
+alter table DescriptionBase_Marker drop constraint FK6132140CF1DDBFAB [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DESCRIPTIONBASE_MARKER_AUD" not found; SQL statement:
+alter table DescriptionBase_Marker_AUD drop constraint FK92DD5BDD34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DESCRIPTIONBASE_ORIGINALSOURCEBASE" not found; SQL statement:
+alter table DescriptionBase_OriginalSourceBase drop constraint FKDC75C70F3A6735D9 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DESCRIPTIONBASE_ORIGINALSOURCEBASE" not found; SQL statement:
+alter table DescriptionBase_OriginalSourceBase drop constraint FKDC75C70FF1DDBFAB [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DESCRIPTIONBASE_ORIGINALSOURCEBASE_AUD" not found; SQL statement:
+alter table DescriptionBase_OriginalSourceBase_AUD drop constraint FK8F39D56034869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DESCRIPTIONBASE_REFERENCE" not found; SQL statement:
+alter table DescriptionBase_Reference drop constraint FKC330D6395C601E49 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DESCRIPTIONBASE_REFERENCE" not found; SQL statement:
+alter table DescriptionBase_Reference drop constraint FKC330D639F1DDBFAB [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DESCRIPTIONBASE_REFERENCE_AUD" not found; SQL statement:
+alter table DescriptionBase_Reference_AUD drop constraint FK76253F8A34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DESCRIPTIONBASE_RIGHTSINFO" not found; SQL statement:
+alter table DescriptionBase_RightsInfo drop constraint FKFEADDDF7C13F7B21 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DESCRIPTIONBASE_RIGHTSINFO" not found; SQL statement:
+alter table DescriptionBase_RightsInfo drop constraint FKFEADDDF7F1DDBFAB [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DESCRIPTIONBASE_RIGHTSINFO_AUD" not found; SQL statement:
+alter table DescriptionBase_RightsInfo_AUD drop constraint FK183C384834869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DESCRIPTIONBASE_SCOPE" not found; SQL statement:
+alter table DescriptionBase_Scope drop constraint FKB9257C4294E290CA [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DESCRIPTIONBASE_SCOPE" not found; SQL statement:
+alter table DescriptionBase_Scope drop constraint FKB9257C42D86445CE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DESCRIPTIONBASE_SCOPE_AUD" not found; SQL statement:
+alter table DescriptionBase_Scope_AUD drop constraint FK75D5B91334869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DESCRIPTIONELEMENTBASE" not found; SQL statement:
+alter table DescriptionElementBase drop constraint FK38FE76714FF2DB2C [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DESCRIPTIONELEMENTBASE" not found; SQL statement:
+alter table DescriptionElementBase drop constraint FK38FE7671BC5DA539 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DESCRIPTIONELEMENTBASE" not found; SQL statement:
+alter table DescriptionElementBase drop constraint FK38FE76714220AFEB [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DESCRIPTIONELEMENTBASE" not found; SQL statement:
+alter table DescriptionElementBase drop constraint FK38FE767134AF0E81 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DESCRIPTIONELEMENTBASE" not found; SQL statement:
+alter table DescriptionElementBase drop constraint FK38FE76711C3C3FF7 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DESCRIPTIONELEMENTBASE" not found; SQL statement:
+alter table DescriptionElementBase drop constraint FK38FE7671E8D36B00 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DESCRIPTIONELEMENTBASE" not found; SQL statement:
+alter table DescriptionElementBase drop constraint FK38FE7671693C1147 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DESCRIPTIONELEMENTBASE" not found; SQL statement:
+alter table DescriptionElementBase drop constraint FK38FE76716561D9B1 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DESCRIPTIONELEMENTBASE" not found; SQL statement:
+alter table DescriptionElementBase drop constraint FK38FE767110A80E07 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DESCRIPTIONELEMENTBASE" not found; SQL statement:
+alter table DescriptionElementBase drop constraint FK38FE76719108D9B [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DESCRIPTIONELEMENTBASE" not found; SQL statement:
+alter table DescriptionElementBase drop constraint FK38FE76716D0D7A56 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DESCRIPTIONELEMENTBASE_AUD" not found; SQL statement:
+alter table DescriptionElementBase_AUD drop constraint FKF3803C234869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DESCRIPTIONELEMENTBASE_ANNOTATION" not found; SQL statement:
+alter table DescriptionElementBase_Annotation drop constraint FK7EE5E5DD1E403E0B [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DESCRIPTIONELEMENTBASE_ANNOTATION" not found; SQL statement:
+alter table DescriptionElementBase_Annotation drop constraint FK7EE5E5DD3B8BB609 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DESCRIPTIONELEMENTBASE_ANNOTATION_AUD" not found; SQL statement:
+alter table DescriptionElementBase_Annotation_AUD drop constraint FK2BC1DD2E34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DESCRIPTIONELEMENTBASE_LANGUAGESTRING" not found; SQL statement:
+alter table DescriptionElementBase_LanguageString drop constraint FKC753F137ACF5F60B [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DESCRIPTIONELEMENTBASE_LANGUAGESTRING" not found; SQL statement:
+alter table DescriptionElementBase_LanguageString drop constraint FKC753F137C6D55834 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DESCRIPTIONELEMENTBASE_LANGUAGESTRING" not found; SQL statement:
+alter table DescriptionElementBase_LanguageString drop constraint FKC753F137C086B46F [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DESCRIPTIONELEMENTBASE_LANGUAGESTRING_AUD" not found; SQL statement:
+alter table DescriptionElementBase_LanguageString_AUD drop constraint FK2D26AB8834869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DESCRIPTIONELEMENTBASE_MARKER" not found; SQL statement:
+alter table DescriptionElementBase_Marker drop constraint FK1CB715E8777265A1 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DESCRIPTIONELEMENTBASE_MARKER" not found; SQL statement:
+alter table DescriptionElementBase_Marker drop constraint FK1CB715E83B8BB609 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DESCRIPTIONELEMENTBASE_MARKER_AUD" not found; SQL statement:
+alter table DescriptionElementBase_Marker_AUD drop constraint FK1E160FB934869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DESCRIPTIONELEMENTBASE_MEDIA" not found; SQL statement:
+alter table DescriptionElementBase_Media drop constraint FK21F70076C2C29593 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DESCRIPTIONELEMENTBASE_MEDIA" not found; SQL statement:
+alter table DescriptionElementBase_Media drop constraint FK21F700763B8BB609 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DESCRIPTIONELEMENTBASE_MEDIA_AUD" not found; SQL statement:
+alter table DescriptionElementBase_Media_AUD drop constraint FK5522034734869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DESCRIPTIONELEMENTBASE_MODIFIER" not found; SQL statement:
+alter table DescriptionElementBase_Modifier drop constraint FK97E0D105F4E35BCD [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DESCRIPTIONELEMENTBASE_MODIFIER" not found; SQL statement:
+alter table DescriptionElementBase_Modifier drop constraint FK97E0D1053B8BB609 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DESCRIPTIONELEMENTBASE_MODIFIER_AUD" not found; SQL statement:
+alter table DescriptionElementBase_Modifier_AUD drop constraint FK2982F45634869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DESCRIPTIONELEMENTBASE_MODIFYINGTEXT" not found; SQL statement:
+alter table DescriptionElementBase_ModifyingText drop constraint FK522D90C7F05D08D4 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DESCRIPTIONELEMENTBASE_MODIFYINGTEXT" not found; SQL statement:
+alter table DescriptionElementBase_ModifyingText drop constraint FK522D90C79682414B [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DESCRIPTIONELEMENTBASE_MODIFYINGTEXT" not found; SQL statement:
+alter table DescriptionElementBase_ModifyingText drop constraint FK522D90C73B8BB609 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DESCRIPTIONELEMENTBASE_MODIFYINGTEXT_AUD" not found; SQL statement:
+alter table DescriptionElementBase_ModifyingText_AUD drop constraint FK6C06031834869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DESCRIPTIONELEMENTBASE_ORIGINALSOURCEBASE" not found; SQL statement:
+alter table DescriptionElementBase_OriginalSourceBase drop constraint FKF41ADEEBA6473CCC [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DESCRIPTIONELEMENTBASE_ORIGINALSOURCEBASE" not found; SQL statement:
+alter table DescriptionElementBase_OriginalSourceBase drop constraint FKF41ADEEB3B8BB609 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DESCRIPTIONELEMENTBASE_ORIGINALSOURCEBASE_AUD" not found; SQL statement:
+alter table DescriptionElementBase_OriginalSourceBase_AUD drop constraint FK9C979F3C34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DETERMINATIONEVENT" not found; SQL statement:
+alter table DeterminationEvent drop constraint FK1DB24974FF2DB2C [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DETERMINATIONEVENT" not found; SQL statement:
+alter table DeterminationEvent drop constraint FK1DB2497BC5DA539 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DETERMINATIONEVENT" not found; SQL statement:
+alter table DeterminationEvent drop constraint FK1DB24973DA462D5 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DETERMINATIONEVENT" not found; SQL statement:
+alter table DeterminationEvent drop constraint FK1DB24974B251DAD [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DETERMINATIONEVENT" not found; SQL statement:
+alter table DeterminationEvent drop constraint FK1DB2497BD54CF92 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DETERMINATIONEVENT" not found; SQL statement:
+alter table DeterminationEvent drop constraint FK1DB2497AEC8CCAA [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DETERMINATIONEVENT" not found; SQL statement:
+alter table DeterminationEvent drop constraint FK1DB2497DA935185 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DETERMINATIONEVENT_AUD" not found; SQL statement:
+alter table DeterminationEvent_AUD drop constraint FKA0252EE834869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DETERMINATIONEVENT_ANNOTATION" not found; SQL statement:
+alter table DeterminationEvent_Annotation drop constraint FKB74F03F71E403E0B [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DETERMINATIONEVENT_ANNOTATION" not found; SQL statement:
+alter table DeterminationEvent_Annotation drop constraint FKB74F03F76BE0BFDA [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DETERMINATIONEVENT_ANNOTATION_AUD" not found; SQL statement:
+alter table DeterminationEvent_Annotation_AUD drop constraint FKAFDA5E4834869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DETERMINATIONEVENT_MARKER" not found; SQL statement:
+alter table DeterminationEvent_Marker drop constraint FK5C475102777265A1 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DETERMINATIONEVENT_MARKER" not found; SQL statement:
+alter table DeterminationEvent_Marker drop constraint FK5C4751026BE0BFDA [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DETERMINATIONEVENT_MARKER_AUD" not found; SQL statement:
+alter table DeterminationEvent_Marker_AUD drop constraint FK567F2DD334869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DETERMINATIONEVENT_REFERENCE" not found; SQL statement:
+alter table DeterminationEvent_Reference drop constraint FK8FB1ED8355A53F64 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DETERMINATIONEVENT_REFERENCE" not found; SQL statement:
+alter table DeterminationEvent_Reference drop constraint FK8FB1ED836BE0BFDA [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DETERMINATIONEVENT_REFERENCE_AUD" not found; SQL statement:
+alter table DeterminationEvent_Reference_AUD drop constraint FK6255A1D434869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DNAQUALITY" not found; SQL statement:
+alter table DnaQuality drop constraint FK7F4518084FF2DB2C [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DNAQUALITY" not found; SQL statement:
+alter table DnaQuality drop constraint FK7F451808BC5DA539 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DNAQUALITY" not found; SQL statement:
+alter table DnaQuality drop constraint FK7F45180823A844FA [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DNAQUALITY" not found; SQL statement:
+alter table DnaQuality drop constraint FK7F45180887BB6462 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DNAQUALITY" not found; SQL statement:
+alter table DnaQuality drop constraint FK7F451808632EAD0D [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "DNAQUALITY_AUD" not found; SQL statement:
+alter table DnaQuality_AUD drop constraint FKA79601D934869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "ENTITYCONSTRAINTVIOLATION" not found; SQL statement:
+alter table EntityConstraintViolation drop constraint FK8970AEC54FF2DB2C [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "ENTITYCONSTRAINTVIOLATION" not found; SQL statement:
+alter table EntityConstraintViolation drop constraint FK8970AEC57CB10052 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "ENTITYVALIDATION" not found; SQL statement:
+alter table EntityValidation drop constraint FKE5A60CDC4FF2DB2C [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "EXTENSION" not found; SQL statement:
+alter table Extension drop constraint FK52EF3C1F4FF2DB2C [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "EXTENSION" not found; SQL statement:
+alter table Extension drop constraint FK52EF3C1FBC5DA539 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "EXTENSION" not found; SQL statement:
+alter table Extension drop constraint FK52EF3C1FAD392BD3 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "EXTENSION_AUD" not found; SQL statement:
+alter table Extension_AUD drop constraint FK92D2427034869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "FEATURENODE" not found; SQL statement:
+alter table FeatureNode drop constraint FK4CEED9F84FF2DB2C [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "FEATURENODE" not found; SQL statement:
+alter table FeatureNode drop constraint FK4CEED9F8BC5DA539 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "FEATURENODE" not found; SQL statement:
+alter table FeatureNode drop constraint FK4CEED9F84220AFEB [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "FEATURENODE" not found; SQL statement:
+alter table FeatureNode drop constraint FK4CEED9F847C496CB [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "FEATURENODE" not found; SQL statement:
+alter table FeatureNode drop constraint FK4CEED9F8E0AD2C59 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "FEATURENODE_AUD" not found; SQL statement:
+alter table FeatureNode_AUD drop constraint FK25AD4BC934869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "FEATURENODE_DEFINEDTERMBASE_INAPPLICABLEIF" not found; SQL statement:
+alter table FeatureNode_DefinedTermBase_InapplicableIf drop constraint FK56833D011128E63B [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "FEATURENODE_DEFINEDTERMBASE_INAPPLICABLEIF" not found; SQL statement:
+alter table FeatureNode_DefinedTermBase_InapplicableIf drop constraint FK56833D0152FCC4B [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "FEATURENODE_DEFINEDTERMBASE_INAPPLICABLEIF_AUD" not found; SQL statement:
+alter table FeatureNode_DefinedTermBase_InapplicableIf_AUD drop constraint FKB8D7025234869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "FEATURENODE_DEFINEDTERMBASE_ONLYAPPLICABLE" not found; SQL statement:
+alter table FeatureNode_DefinedTermBase_OnlyApplicable drop constraint FK6AE876AB57FA94D4 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "FEATURENODE_DEFINEDTERMBASE_ONLYAPPLICABLE" not found; SQL statement:
+alter table FeatureNode_DefinedTermBase_OnlyApplicable drop constraint FK6AE876AB52FCC4B [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "FEATURENODE_DEFINEDTERMBASE_ONLYAPPLICABLE_AUD" not found; SQL statement:
+alter table FeatureNode_DefinedTermBase_OnlyApplicable_AUD drop constraint FK3F5356FC34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "FEATURETREE" not found; SQL statement:
+alter table FeatureTree drop constraint FK4CF19F944FF2DB2C [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "FEATURETREE" not found; SQL statement:
+alter table FeatureTree drop constraint FK4CF19F94BC5DA539 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "FEATURETREE" not found; SQL statement:
+alter table FeatureTree drop constraint FK4CF19F94B7892921 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "FEATURETREE_AUD" not found; SQL statement:
+alter table FeatureTree_AUD drop constraint FK355BE36534869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "FEATURETREE_ANNOTATION" not found; SQL statement:
+alter table FeatureTree_Annotation drop constraint FK5D8B8DA1E403E0B [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "FEATURETREE_ANNOTATION" not found; SQL statement:
+alter table FeatureTree_Annotation drop constraint FK5D8B8DA47C496CB [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "FEATURETREE_ANNOTATION_AUD" not found; SQL statement:
+alter table FeatureTree_Annotation_AUD drop constraint FK86E8E9AB34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "FEATURETREE_CREDIT" not found; SQL statement:
+alter table FeatureTree_Credit drop constraint FK7536062432D1B9F [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "FEATURETREE_CREDIT" not found; SQL statement:
+alter table FeatureTree_Credit drop constraint FK7536062447C496CB [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "FEATURETREE_CREDIT_AUD" not found; SQL statement:
+alter table FeatureTree_Credit_AUD drop constraint FK40EA81F534869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "FEATURETREE_EXTENSION" not found; SQL statement:
+alter table FeatureTree_Extension drop constraint FKAD1E6D34927DE9DF [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "FEATURETREE_EXTENSION" not found; SQL statement:
+alter table FeatureTree_Extension drop constraint FKAD1E6D3447C496CB [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "FEATURETREE_EXTENSION_AUD" not found; SQL statement:
+alter table FeatureTree_Extension_AUD drop constraint FKF128E10534869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "FEATURETREE_IDENTIFIER" not found; SQL statement:
+alter table FeatureTree_Identifier drop constraint FK2117A54E12073FF [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "FEATURETREE_IDENTIFIER" not found; SQL statement:
+alter table FeatureTree_Identifier drop constraint FK2117A5447C496CB [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "FEATURETREE_IDENTIFIER_AUD" not found; SQL statement:
+alter table FeatureTree_Identifier_AUD drop constraint FK4D905E2534869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "FEATURETREE_MARKER" not found; SQL statement:
+alter table FeatureTree_Marker drop constraint FK855CEF65777265A1 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "FEATURETREE_MARKER" not found; SQL statement:
+alter table FeatureTree_Marker drop constraint FK855CEF6547C496CB [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "FEATURETREE_MARKER_AUD" not found; SQL statement:
+alter table FeatureTree_Marker_AUD drop constraint FKA508E2B634869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "FEATURETREE_ORIGINALSOURCEBASE" not found; SQL statement:
+alter table FeatureTree_OriginalSourceBase drop constraint FK13BD64E83A6735D9 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "FEATURETREE_ORIGINALSOURCEBASE" not found; SQL statement:
+alter table FeatureTree_OriginalSourceBase drop constraint FK13BD64E847C496CB [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "FEATURETREE_ORIGINALSOURCEBASE_AUD" not found; SQL statement:
+alter table FeatureTree_OriginalSourceBase_AUD drop constraint FK7B5CDEB934869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "FEATURETREE_REPRESENTATION" not found; SQL statement:
+alter table FeatureTree_Representation drop constraint FK8C458F8B31C4747 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "FEATURETREE_REPRESENTATION" not found; SQL statement:
+alter table FeatureTree_Representation drop constraint FK8C458F847C496CB [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "FEATURETREE_REPRESENTATION_AUD" not found; SQL statement:
+alter table FeatureTree_Representation_AUD drop constraint FKECAB4AC934869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "FEATURETREE_RIGHTSINFO" not found; SQL statement:
+alter table FeatureTree_RightsInfo drop constraint FK10D964D0C13F7B21 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "FEATURETREE_RIGHTSINFO" not found; SQL statement:
+alter table FeatureTree_RightsInfo drop constraint FK10D964D047C496CB [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "FEATURETREE_RIGHTSINFO_AUD" not found; SQL statement:
+alter table FeatureTree_RightsInfo_AUD drop constraint FK8926AAA134869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "GATHERINGEVENT" not found; SQL statement:
+alter table GatheringEvent drop constraint FK6F1286F34FF2DB2C [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "GATHERINGEVENT" not found; SQL statement:
+alter table GatheringEvent drop constraint FK6F1286F3BC5DA539 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "GATHERINGEVENT" not found; SQL statement:
+alter table GatheringEvent drop constraint FK6F1286F33DA462D5 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "GATHERINGEVENT" not found; SQL statement:
+alter table GatheringEvent drop constraint FK6F1286F3C15704E [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "GATHERINGEVENT" not found; SQL statement:
+alter table GatheringEvent drop constraint FK6F1286F3F55AFD89 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "GATHERINGEVENT" not found; SQL statement:
+alter table GatheringEvent drop constraint FK6F1286F38B455EC6 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "GATHERINGEVENT_AUD" not found; SQL statement:
+alter table GatheringEvent_AUD drop constraint FK3EC034434869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "GATHERINGEVENT_ANNOTATION" not found; SQL statement:
+alter table GatheringEvent_Annotation drop constraint FK76DDD01B1E403E0B [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "GATHERINGEVENT_ANNOTATION" not found; SQL statement:
+alter table GatheringEvent_Annotation drop constraint FK76DDD01BF95F225A [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "GATHERINGEVENT_ANNOTATION_AUD" not found; SQL statement:
+alter table GatheringEvent_Annotation_AUD drop constraint FK351E786C34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "GATHERINGEVENT_DEFINEDTERMBASE" not found; SQL statement:
+alter table GatheringEvent_DefinedTermBase drop constraint FK69D9A11A7C34B6D6 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "GATHERINGEVENT_DEFINEDTERMBASE" not found; SQL statement:
+alter table GatheringEvent_DefinedTermBase drop constraint FK69D9A11AF95F225A [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "GATHERINGEVENT_DEFINEDTERMBASE_AUD" not found; SQL statement:
+alter table GatheringEvent_DefinedTermBase_AUD drop constraint FKB3BBB1EB34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "GATHERINGEVENT_MARKER" not found; SQL statement:
+alter table GatheringEvent_Marker drop constraint FK7B49CF26777265A1 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "GATHERINGEVENT_MARKER" not found; SQL statement:
+alter table GatheringEvent_Marker drop constraint FK7B49CF26F95F225A [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "GATHERINGEVENT_MARKER_AUD" not found; SQL statement:
+alter table GatheringEvent_Marker_AUD drop constraint FK160DF9F734869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "GRANTEDAUTHORITYIMPL" not found; SQL statement:
+alter table GrantedAuthorityImpl drop constraint FKB05CF9284FF2DB2C [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "HOMOTYPICALGROUP" not found; SQL statement:
+alter table HomotypicalGroup drop constraint FK7DECCC184FF2DB2C [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "HOMOTYPICALGROUP" not found; SQL statement:
+alter table HomotypicalGroup drop constraint FK7DECCC18BC5DA539 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "HOMOTYPICALGROUP_AUD" not found; SQL statement:
+alter table HomotypicalGroup_AUD drop constraint FKE4252DE934869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "HOMOTYPICALGROUP_ANNOTATION" not found; SQL statement:
+alter table HomotypicalGroup_Annotation drop constraint FK7A0351D61E403E0B [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "HOMOTYPICALGROUP_ANNOTATION" not found; SQL statement:
+alter table HomotypicalGroup_Annotation drop constraint FK7A0351D6BFEAE500 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "HOMOTYPICALGROUP_ANNOTATION_AUD" not found; SQL statement:
+alter table HomotypicalGroup_Annotation_AUD drop constraint FK41E6A4A734869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "HOMOTYPICALGROUP_MARKER" not found; SQL statement:
+alter table HomotypicalGroup_Marker drop constraint FK97D36661777265A1 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "HOMOTYPICALGROUP_MARKER" not found; SQL statement:
+alter table HomotypicalGroup_Marker drop constraint FK97D36661BFEAE500 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "HOMOTYPICALGROUP_MARKER_AUD" not found; SQL statement:
+alter table HomotypicalGroup_Marker_AUD drop constraint FK19337BB234869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "HYBRIDRELATIONSHIP" not found; SQL statement:
+alter table HybridRelationship drop constraint FK9033CE744FF2DB2C [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "HYBRIDRELATIONSHIP" not found; SQL statement:
+alter table HybridRelationship drop constraint FK9033CE74BC5DA539 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "HYBRIDRELATIONSHIP" not found; SQL statement:
+alter table HybridRelationship drop constraint FK9033CE74AEB7F3BE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "HYBRIDRELATIONSHIP" not found; SQL statement:
+alter table HybridRelationship drop constraint FK9033CE749DD57A93 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "HYBRIDRELATIONSHIP" not found; SQL statement:
+alter table HybridRelationship drop constraint FK9033CE74AF4F9F62 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "HYBRIDRELATIONSHIP" not found; SQL statement:
+alter table HybridRelationship drop constraint FK9033CE7455F241D4 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "HYBRIDRELATIONSHIP_AUD" not found; SQL statement:
+alter table HybridRelationship_AUD drop constraint FK9C2BA24534869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "HYBRIDRELATIONSHIP_ANNOTATION" not found; SQL statement:
+alter table HybridRelationship_Annotation drop constraint FK2C7E7DFA1E403E0B [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "HYBRIDRELATIONSHIP_ANNOTATION" not found; SQL statement:
+alter table HybridRelationship_Annotation drop constraint FK2C7E7DFA59832240 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "HYBRIDRELATIONSHIP_ANNOTATION_AUD" not found; SQL statement:
+alter table HybridRelationship_Annotation_AUD drop constraint FKACE71ECB34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "HYBRIDRELATIONSHIP_MARKER" not found; SQL statement:
+alter table HybridRelationship_Marker drop constraint FKCEF24485777265A1 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "HYBRIDRELATIONSHIP_MARKER" not found; SQL statement:
+alter table HybridRelationship_Marker drop constraint FKCEF2448559832240 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "HYBRIDRELATIONSHIP_MARKER_AUD" not found; SQL statement:
+alter table HybridRelationship_Marker_AUD drop constraint FKCBAEA7D634869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "IDENTIFIER" not found; SQL statement:
+alter table Identifier drop constraint FK165A88C94FF2DB2C [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "IDENTIFIER" not found; SQL statement:
+alter table Identifier drop constraint FK165A88C9BC5DA539 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "IDENTIFIER" not found; SQL statement:
+alter table Identifier drop constraint FK165A88C9E67FC44F [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "IDENTIFIER_AUD" not found; SQL statement:
+alter table Identifier_AUD drop constraint FKE1132A1A34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "IDENTIFIER_ANNOTATION" not found; SQL statement:
+alter table Identifier_Annotation drop constraint FK12BB6C851E403E0B [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "IDENTIFIER_ANNOTATION" not found; SQL statement:
+alter table Identifier_Annotation drop constraint FK12BB6C85E640A3E0 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "IDENTIFIER_ANNOTATION_AUD" not found; SQL statement:
+alter table Identifier_Annotation_AUD drop constraint FK36A3CFD634869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "IDENTIFIER_MARKER" not found; SQL statement:
+alter table Identifier_Marker drop constraint FK4A6A3090777265A1 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "IDENTIFIER_MARKER" not found; SQL statement:
+alter table Identifier_Marker drop constraint FK4A6A3090E640A3E0 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "IDENTIFIER_MARKER_AUD" not found; SQL statement:
+alter table Identifier_Marker_AUD drop constraint FKB1EB966134869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "INDIVIDUALASSOCIATION_LANGUAGESTRING" not found; SQL statement:
+alter table IndividualAssociation_LanguageString drop constraint FKB5C75EC02BEBA58D [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "INDIVIDUALASSOCIATION_LANGUAGESTRING" not found; SQL statement:
+alter table IndividualAssociation_LanguageString drop constraint FKB5C75EC028459272 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "INDIVIDUALASSOCIATION_LANGUAGESTRING" not found; SQL statement:
+alter table IndividualAssociation_LanguageString drop constraint FKB5C75EC084FF3EDF [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "INDIVIDUALASSOCIATION_LANGUAGESTRING_AUD" not found; SQL statement:
+alter table IndividualAssociation_LanguageString_AUD drop constraint FKB1A62C9134869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "INSTITUTIONALMEMBERSHIP" not found; SQL statement:
+alter table InstitutionalMembership drop constraint FK3C8E1FF94FF2DB2C [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "INSTITUTIONALMEMBERSHIP" not found; SQL statement:
+alter table InstitutionalMembership drop constraint FK3C8E1FF9BC5DA539 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "INSTITUTIONALMEMBERSHIP" not found; SQL statement:
+alter table InstitutionalMembership drop constraint FK3C8E1FF916B9CA77 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "INSTITUTIONALMEMBERSHIP" not found; SQL statement:
+alter table InstitutionalMembership drop constraint FK3C8E1FF9AAC1B820 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "INSTITUTIONALMEMBERSHIP_AUD" not found; SQL statement:
+alter table InstitutionalMembership_AUD drop constraint FK847A94A34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "INTEXTREFERENCE" not found; SQL statement:
+alter table IntextReference drop constraint FK861B8B794FF2DB2C [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "INTEXTREFERENCE" not found; SQL statement:
+alter table IntextReference drop constraint FK861B8B79BC5DA539 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "INTEXTREFERENCE" not found; SQL statement:
+alter table IntextReference drop constraint FK861B8B79F7976FC5 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "INTEXTREFERENCE" not found; SQL statement:
+alter table IntextReference drop constraint FK861B8B79994CCE20 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "INTEXTREFERENCE" not found; SQL statement:
+alter table IntextReference drop constraint FK861B8B7937998500 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "INTEXTREFERENCE" not found; SQL statement:
+alter table IntextReference drop constraint FK861B8B79C2C29593 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "INTEXTREFERENCE" not found; SQL statement:
+alter table IntextReference drop constraint FK861B8B795CB60F3B [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "INTEXTREFERENCE" not found; SQL statement:
+alter table IntextReference drop constraint FK861B8B798D0FB4DA [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "INTEXTREFERENCE" not found; SQL statement:
+alter table IntextReference drop constraint FK861B8B79AEC8CCAA [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "INTEXTREFERENCE" not found; SQL statement:
+alter table IntextReference drop constraint FK861B8B79DA935185 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "INTEXTREFERENCE" not found; SQL statement:
+alter table IntextReference drop constraint FK861B8B79EE6B45A6 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "INTEXTREFERENCE_AUD" not found; SQL statement:
+alter table IntextReference_AUD drop constraint FKAE3354CA34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "KEYSTATEMENT" not found; SQL statement:
+alter table KeyStatement drop constraint FK7125B9F04FF2DB2C [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "KEYSTATEMENT" not found; SQL statement:
+alter table KeyStatement drop constraint FK7125B9F0BC5DA539 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "KEYSTATEMENT_AUD" not found; SQL statement:
+alter table KeyStatement_AUD drop constraint FK93036FC134869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "KEYSTATEMENT_LANGUAGESTRING" not found; SQL statement:
+alter table KeyStatement_LanguageString drop constraint FK70BB5FD89C782795 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "KEYSTATEMENT_LANGUAGESTRING" not found; SQL statement:
+alter table KeyStatement_LanguageString drop constraint FK70BB5FD8DA0C376A [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "KEYSTATEMENT_LANGUAGESTRING" not found; SQL statement:
+alter table KeyStatement_LanguageString drop constraint FK70BB5FD8AAA67049 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "KEYSTATEMENT_LANGUAGESTRING_AUD" not found; SQL statement:
+alter table KeyStatement_LanguageString_AUD drop constraint FKE203E1A934869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "LSIDAUTHORITY" not found; SQL statement:
+alter table LSIDAuthority drop constraint FK759DB8814FF2DB2C [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "LSIDAUTHORITY_NAMESPACES" not found; SQL statement:
+alter table LSIDAuthority_namespaces drop constraint FKB04948F64FFCFD94 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "LANGUAGESTRING" not found; SQL statement:
+alter table LanguageString drop constraint FKB5FDC9A94FF2DB2C [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "LANGUAGESTRING" not found; SQL statement:
+alter table LanguageString drop constraint FKB5FDC9A9BC5DA539 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "LANGUAGESTRING" not found; SQL statement:
+alter table LanguageString drop constraint FKB5FDC9A9E8D36B00 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "LANGUAGESTRING_AUD" not found; SQL statement:
+alter table LanguageString_AUD drop constraint FK896AFAFA34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "LANGUAGESTRING_ANNOTATION" not found; SQL statement:
+alter table LanguageString_Annotation drop constraint FK8400DFA51E403E0B [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "LANGUAGESTRING_ANNOTATION" not found; SQL statement:
+alter table LanguageString_Annotation drop constraint FK8400DFA537998500 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "LANGUAGESTRING_ANNOTATION_AUD" not found; SQL statement:
+alter table LanguageString_Annotation_AUD drop constraint FKD3BAB2F634869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "LANGUAGESTRING_MARKER" not found; SQL statement:
+alter table LanguageString_Marker drop constraint FK8DA633B0777265A1 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "LANGUAGESTRING_MARKER" not found; SQL statement:
+alter table LanguageString_Marker drop constraint FK8DA633B037998500 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "LANGUAGESTRING_MARKER_AUD" not found; SQL statement:
+alter table LanguageString_Marker_AUD drop constraint FK2331098134869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MARKER" not found; SQL statement:
+alter table Marker drop constraint FK88F1805A4FF2DB2C [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MARKER" not found; SQL statement:
+alter table Marker drop constraint FK88F1805ABC5DA539 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MARKER" not found; SQL statement:
+alter table Marker drop constraint FK88F1805AD64DC020 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MARKER_AUD" not found; SQL statement:
+alter table Marker_AUD drop constraint FKB951F12B34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MATERIALORMETHODEVENT" not found; SQL statement:
+alter table MaterialOrMethodEvent drop constraint FK458A264F4FF2DB2C [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MATERIALORMETHODEVENT" not found; SQL statement:
+alter table MaterialOrMethodEvent drop constraint FK458A264FBC5DA539 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MATERIALORMETHODEVENT" not found; SQL statement:
+alter table MaterialOrMethodEvent drop constraint FK458A264F3DA462D5 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MATERIALORMETHODEVENT" not found; SQL statement:
+alter table MaterialOrMethodEvent drop constraint FK458A264F14D2C695 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MATERIALORMETHODEVENT" not found; SQL statement:
+alter table MaterialOrMethodEvent drop constraint FK458A264F3781DA30 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MATERIALORMETHODEVENT" not found; SQL statement:
+alter table MaterialOrMethodEvent drop constraint FK458A264F1600EAB3 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MATERIALORMETHODEVENT" not found; SQL statement:
+alter table MaterialOrMethodEvent drop constraint FK458A264F9A129634 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MATERIALORMETHODEVENT_AUD" not found; SQL statement:
+alter table MaterialOrMethodEvent_AUD drop constraint FK8C8C94A034869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MATERIALORMETHODEVENT_ANNOTATION" not found; SQL statement:
+alter table MaterialOrMethodEvent_Annotation drop constraint FKD9943F3F1E403E0B [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MATERIALORMETHODEVENT_ANNOTATION" not found; SQL statement:
+alter table MaterialOrMethodEvent_Annotation drop constraint FKD9943F3F2F50355A [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MATERIALORMETHODEVENT_ANNOTATION_AUD" not found; SQL statement:
+alter table MaterialOrMethodEvent_Annotation_AUD drop constraint FK6B00B59034869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MATERIALORMETHODEVENT_MARKER" not found; SQL statement:
+alter table MaterialOrMethodEvent_Marker drop constraint FKF0BD704A777265A1 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MATERIALORMETHODEVENT_MARKER" not found; SQL statement:
+alter table MaterialOrMethodEvent_Marker drop constraint FKF0BD704A2F50355A [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MATERIALORMETHODEVENT_MARKER_AUD" not found; SQL statement:
+alter table MaterialOrMethodEvent_Marker_AUD drop constraint FK78C4691B34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MEDIA" not found; SQL statement:
+alter table Media drop constraint FK46C7FC44FF2DB2C [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MEDIA" not found; SQL statement:
+alter table Media drop constraint FK46C7FC4BC5DA539 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MEDIA" not found; SQL statement:
+alter table Media drop constraint FK46C7FC4C2445443 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MEDIAKEY_NAMEDAREA" not found; SQL statement:
+alter table MediaKey_NamedArea drop constraint FK31E7D4023FF8E7B2 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MEDIAKEY_NAMEDAREA" not found; SQL statement:
+alter table MediaKey_NamedArea drop constraint FK31E7D402BE59D760 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MEDIAKEY_NAMEDAREA_AUD" not found; SQL statement:
+alter table MediaKey_NamedArea_AUD drop constraint FK922630D334869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MEDIAKEY_SCOPE" not found; SQL statement:
+alter table MediaKey_Scope drop constraint FKBFFEE8F05431B96E [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MEDIAKEY_SCOPE" not found; SQL statement:
+alter table MediaKey_Scope drop constraint FKBFFEE8F0BE59D760 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MEDIAKEY_SCOPE_AUD" not found; SQL statement:
+alter table MediaKey_Scope_AUD drop constraint FK63AD1EC134869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MEDIAKEY_TAXON" not found; SQL statement:
+alter table MediaKey_Taxon drop constraint FKC00C3966DE9A3E39 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MEDIAKEY_TAXON" not found; SQL statement:
+alter table MediaKey_Taxon drop constraint FKC00C3966815C7E9 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MEDIAKEY_TAXON_AUD" not found; SQL statement:
+alter table MediaKey_Taxon_AUD drop constraint FK311443734869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MEDIAREPRESENTATION" not found; SQL statement:
+alter table MediaRepresentation drop constraint FK1966BDB14FF2DB2C [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MEDIAREPRESENTATION" not found; SQL statement:
+alter table MediaRepresentation drop constraint FK1966BDB1BC5DA539 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MEDIAREPRESENTATION" not found; SQL statement:
+alter table MediaRepresentation drop constraint FK1966BDB1C2C29593 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MEDIAREPRESENTATIONPART" not found; SQL statement:
+alter table MediaRepresentationPart drop constraint FK67A455444FF2DB2C [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MEDIAREPRESENTATIONPART" not found; SQL statement:
+alter table MediaRepresentationPart drop constraint FK67A45544BC5DA539 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MEDIAREPRESENTATIONPART" not found; SQL statement:
+alter table MediaRepresentationPart drop constraint FK67A45544E3818E37 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MEDIAREPRESENTATIONPART_AUD" not found; SQL statement:
+alter table MediaRepresentationPart_AUD drop constraint FKA75C411534869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MEDIAREPRESENTATION_AUD" not found; SQL statement:
+alter table MediaRepresentation_AUD drop constraint FK67AAAB0234869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MEDIAREPRESENTATION_MEDIAREPRESENTATIONPART_AUD" not found; SQL statement:
+alter table MediaRepresentation_MediaRepresentationPart_AUD drop constraint FK3544378734869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MEDIA_AUD" not found; SQL statement:
+alter table Media_AUD drop constraint FKF70B2B9534869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MEDIA_ANNOTATION" not found; SQL statement:
+alter table Media_Annotation drop constraint FKA020DAAA1E403E0B [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MEDIA_ANNOTATION" not found; SQL statement:
+alter table Media_Annotation drop constraint FKA020DAAAC2C29593 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MEDIA_ANNOTATION_AUD" not found; SQL statement:
+alter table Media_Annotation_AUD drop constraint FK99ABA37B34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MEDIA_CREDIT" not found; SQL statement:
+alter table Media_Credit drop constraint FKC1F78FF432D1B9F [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MEDIA_CREDIT" not found; SQL statement:
+alter table Media_Credit drop constraint FKC1F78FF4C2C29593 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MEDIA_CREDIT_AUD" not found; SQL statement:
+alter table Media_Credit_AUD drop constraint FKDB32A3C534869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MEDIA_DESCRIPTION" not found; SQL statement:
+alter table Media_Description drop constraint FK368283E12BEBA58D [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MEDIA_DESCRIPTION" not found; SQL statement:
+alter table Media_Description drop constraint FK368283E128459272 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MEDIA_DESCRIPTION" not found; SQL statement:
+alter table Media_Description drop constraint FK368283E1C2C29593 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MEDIA_DESCRIPTION_AUD" not found; SQL statement:
+alter table Media_Description_AUD drop constraint FK6817D93234869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MEDIA_EXTENSION" not found; SQL statement:
+alter table Media_Extension drop constraint FKDB62D164927DE9DF [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MEDIA_EXTENSION" not found; SQL statement:
+alter table Media_Extension drop constraint FKDB62D164C2C29593 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MEDIA_EXTENSION_AUD" not found; SQL statement:
+alter table Media_Extension_AUD drop constraint FKE13FAD3534869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MEDIA_IDENTIFIER" not found; SQL statement:
+alter table Media_Identifier drop constraint FK9C599C24E12073FF [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MEDIA_IDENTIFIER" not found; SQL statement:
+alter table Media_Identifier drop constraint FK9C599C24C2C29593 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MEDIA_IDENTIFIER_AUD" not found; SQL statement:
+alter table Media_Identifier_AUD drop constraint FK605317F534869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MEDIA_LANGUAGESTRING" not found; SQL statement:
+alter table Media_LanguageString drop constraint FK353DB784A1CA19B1 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MEDIA_LANGUAGESTRING" not found; SQL statement:
+alter table Media_LanguageString drop constraint FK353DB784A0A6EDCE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MEDIA_LANGUAGESTRING" not found; SQL statement:
+alter table Media_LanguageString drop constraint FK353DB784C2C29593 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MEDIA_LANGUAGESTRING_AUD" not found; SQL statement:
+alter table Media_LanguageString_AUD drop constraint FK68FA835534869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MEDIA_MARKER" not found; SQL statement:
+alter table Media_Marker drop constraint FKD21E7935777265A1 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MEDIA_MARKER" not found; SQL statement:
+alter table Media_Marker drop constraint FKD21E7935C2C29593 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MEDIA_MARKER_AUD" not found; SQL statement:
+alter table Media_Marker_AUD drop constraint FK3F51048634869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MEDIA_ORIGINALSOURCEBASE" not found; SQL statement:
+alter table Media_OriginalSourceBase drop constraint FK2FEEB6B83A6735D9 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MEDIA_ORIGINALSOURCEBASE" not found; SQL statement:
+alter table Media_OriginalSourceBase drop constraint FK2FEEB6B8C2C29593 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MEDIA_ORIGINALSOURCEBASE_AUD" not found; SQL statement:
+alter table Media_OriginalSourceBase_AUD drop constraint FK97F0C88934869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MEDIA_REPRESENTATION" not found; SQL statement:
+alter table Media_Representation drop constraint FK1B8712C88F6CABE6 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MEDIA_REPRESENTATION" not found; SQL statement:
+alter table Media_Representation drop constraint FK1B8712C8BE59D760 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MEDIA_REPRESENTATION_AUD" not found; SQL statement:
+alter table Media_Representation_AUD drop constraint FK8DC9C9934869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MEDIA_RIGHTSINFO" not found; SQL statement:
+alter table Media_RightsInfo drop constraint FKAB2186A0C13F7B21 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MEDIA_RIGHTSINFO" not found; SQL statement:
+alter table Media_RightsInfo drop constraint FKAB2186A0C2C29593 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MEDIA_RIGHTSINFO_AUD" not found; SQL statement:
+alter table Media_RightsInfo_AUD drop constraint FK9BE9647134869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MEDIA_SEQUENCE" not found; SQL statement:
+alter table Media_Sequence drop constraint FK61D09FCF29B4761 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MEDIA_SEQUENCE" not found; SQL statement:
+alter table Media_Sequence drop constraint FK61D09FC3282B64 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MEDIA_SEQUENCE_AUD" not found; SQL statement:
+alter table Media_Sequence_AUD drop constraint FK3C7BD9CD34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MEDIA_TAXONBASE" not found; SQL statement:
+alter table Media_TaxonBase drop constraint FK1ABD49E07C3D0017 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MEDIA_TAXONBASE" not found; SQL statement:
+alter table Media_TaxonBase drop constraint FK1ABD49E0BE59D760 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MEDIA_TAXONBASE_AUD" not found; SQL statement:
+alter table Media_TaxonBase_AUD drop constraint FK857187B134869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MULTIACCESSKEY_NAMEDAREA" not found; SQL statement:
+alter table MultiAccessKey_NamedArea drop constraint FK1F5A74893FF8E7B2 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MULTIACCESSKEY_NAMEDAREA" not found; SQL statement:
+alter table MultiAccessKey_NamedArea drop constraint FK1F5A7489B4555A9A [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MULTIACCESSKEY_NAMEDAREA_AUD" not found; SQL statement:
+alter table MultiAccessKey_NamedArea_AUD drop constraint FK4CB735DA34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MULTIACCESSKEY_SCOPE" not found; SQL statement:
+alter table MultiAccessKey_Scope drop constraint FKCC6CE4F75431B96E [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MULTIACCESSKEY_SCOPE" not found; SQL statement:
+alter table MultiAccessKey_Scope drop constraint FKCC6CE4F7B4555A9A [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MULTIACCESSKEY_SCOPE_AUD" not found; SQL statement:
+alter table MultiAccessKey_Scope_AUD drop constraint FK511FBF4834869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MULTIACCESSKEY_TAXON" not found; SQL statement:
+alter table MultiAccessKey_Taxon drop constraint FKCC7A356DDE9A3E39 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MULTIACCESSKEY_TAXON" not found; SQL statement:
+alter table MultiAccessKey_Taxon drop constraint FKCC7A356DB64A7B29 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "MULTIACCESSKEY_TAXON_AUD" not found; SQL statement:
+alter table MultiAccessKey_Taxon_AUD drop constraint FKF083E4BE34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "NAMERELATIONSHIP" not found; SQL statement:
+alter table NameRelationship drop constraint FK5E510834FF2DB2C [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "NAMERELATIONSHIP" not found; SQL statement:
+alter table NameRelationship drop constraint FK5E51083BC5DA539 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "NAMERELATIONSHIP" not found; SQL statement:
+alter table NameRelationship drop constraint FK5E51083AEB7F3BE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "NAMERELATIONSHIP" not found; SQL statement:
+alter table NameRelationship drop constraint FK5E5108316CDFF85 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "NAMERELATIONSHIP" not found; SQL statement:
+alter table NameRelationship drop constraint FK5E5108328482454 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "NAMERELATIONSHIP" not found; SQL statement:
+alter table NameRelationship drop constraint FK5E51083AF619DE3 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "NAMERELATIONSHIP_AUD" not found; SQL statement:
+alter table NameRelationship_AUD drop constraint FK743F44D434869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "NAMERELATIONSHIP_ANNOTATION" not found; SQL statement:
+alter table NameRelationship_Annotation drop constraint FK2E38AC8B1E403E0B [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "NAMERELATIONSHIP_ANNOTATION" not found; SQL statement:
+alter table NameRelationship_Annotation drop constraint FK2E38AC8B7B4CB560 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "NAMERELATIONSHIP_ANNOTATION_AUD" not found; SQL statement:
+alter table NameRelationship_Annotation_AUD drop constraint FKD1D59CDC34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "NAMERELATIONSHIP_MARKER" not found; SQL statement:
+alter table NameRelationship_Marker drop constraint FKE3E46396777265A1 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "NAMERELATIONSHIP_MARKER" not found; SQL statement:
+alter table NameRelationship_Marker drop constraint FKE3E463967B4CB560 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "NAMERELATIONSHIP_MARKER_AUD" not found; SQL statement:
+alter table NameRelationship_Marker_AUD drop constraint FKCD68D66734869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "NOMENCLATURALSTATUS" not found; SQL statement:
+alter table NomenclaturalStatus drop constraint FK1FFEC88B4FF2DB2C [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "NOMENCLATURALSTATUS" not found; SQL statement:
+alter table NomenclaturalStatus drop constraint FK1FFEC88BBC5DA539 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "NOMENCLATURALSTATUS" not found; SQL statement:
+alter table NomenclaturalStatus drop constraint FK1FFEC88BAEB7F3BE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "NOMENCLATURALSTATUS" not found; SQL statement:
+alter table NomenclaturalStatus drop constraint FK1FFEC88B7029BD9F [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "NOMENCLATURALSTATUS_AUD" not found; SQL statement:
+alter table NomenclaturalStatus_AUD drop constraint FKFB2DB8DC34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "NOMENCLATURALSTATUS_ANNOTATION" not found; SQL statement:
+alter table NomenclaturalStatus_Annotation drop constraint FKE6E91F831E403E0B [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "NOMENCLATURALSTATUS_ANNOTATION" not found; SQL statement:
+alter table NomenclaturalStatus_Annotation drop constraint FKE6E91F838D2CB1D4 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "NOMENCLATURALSTATUS_ANNOTATION_AUD" not found; SQL statement:
+alter table NomenclaturalStatus_Annotation_AUD drop constraint FK6A3D3D434869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "NOMENCLATURALSTATUS_MARKER" not found; SQL statement:
+alter table NomenclaturalStatus_Marker drop constraint FK2F5128E777265A1 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "NOMENCLATURALSTATUS_MARKER" not found; SQL statement:
+alter table NomenclaturalStatus_Marker drop constraint FK2F5128E8D2CB1D4 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "NOMENCLATURALSTATUS_MARKER_AUD" not found; SQL statement:
+alter table NomenclaturalStatus_Marker_AUD drop constraint FK8619495F34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "ORIGINALSOURCEBASE" not found; SQL statement:
+alter table OriginalSourceBase drop constraint FK505F2E5D4FF2DB2C [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "ORIGINALSOURCEBASE" not found; SQL statement:
+alter table OriginalSourceBase drop constraint FK505F2E5DBC5DA539 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "ORIGINALSOURCEBASE" not found; SQL statement:
+alter table OriginalSourceBase drop constraint FK505F2E5DAEB7F3BE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "ORIGINALSOURCEBASE" not found; SQL statement:
+alter table OriginalSourceBase drop constraint FK505F2E5D966B96B2 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "ORIGINALSOURCEBASE_AUD" not found; SQL statement:
+alter table OriginalSourceBase_AUD drop constraint FK9662E5AE34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "ORIGINALSOURCEBASE_ANNOTATION" not found; SQL statement:
+alter table OriginalSourceBase_Annotation drop constraint FK208142711E403E0B [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "ORIGINALSOURCEBASE_ANNOTATION" not found; SQL statement:
+alter table OriginalSourceBase_Annotation drop constraint FK20814271B029DDA0 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "ORIGINALSOURCEBASE_ANNOTATION_AUD" not found; SQL statement:
+alter table OriginalSourceBase_Annotation_AUD drop constraint FKA074CFC234869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "ORIGINALSOURCEBASE_MARKER" not found; SQL statement:
+alter table OriginalSourceBase_Marker drop constraint FKB3FFDC7C777265A1 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "ORIGINALSOURCEBASE_MARKER" not found; SQL statement:
+alter table OriginalSourceBase_Marker drop constraint FKB3FFDC7CB029DDA0 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "ORIGINALSOURCEBASE_MARKER_AUD" not found; SQL statement:
+alter table OriginalSourceBase_Marker_AUD drop constraint FKBFB16C4D34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "PERMISSIONGROUP" not found; SQL statement:
+alter table PermissionGroup drop constraint FK629941D04FF2DB2C [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "PERMISSIONGROUP_GRANTEDAUTHORITYIMPL" not found; SQL statement:
+alter table PermissionGroup_GrantedAuthorityImpl drop constraint FK53114371857F6C2 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "PERMISSIONGROUP_GRANTEDAUTHORITYIMPL" not found; SQL statement:
+alter table PermissionGroup_GrantedAuthorityImpl drop constraint FK5311437CA0971A3 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "POLYTOMOUSKEY" not found; SQL statement:
+alter table PolytomousKey drop constraint FKA9E6B1384FF2DB2C [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "POLYTOMOUSKEY" not found; SQL statement:
+alter table PolytomousKey drop constraint FKA9E6B138BC5DA539 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "POLYTOMOUSKEY" not found; SQL statement:
+alter table PolytomousKey drop constraint FKA9E6B138576595C3 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "POLYTOMOUSKEYNODE" not found; SQL statement:
+alter table PolytomousKeyNode drop constraint FK860775A4FF2DB2C [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "POLYTOMOUSKEYNODE" not found; SQL statement:
+alter table PolytomousKeyNode drop constraint FK860775ABC5DA539 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "POLYTOMOUSKEYNODE" not found; SQL statement:
+alter table PolytomousKeyNode drop constraint FK860775A4220AFEB [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "POLYTOMOUSKEYNODE" not found; SQL statement:
+alter table PolytomousKeyNode drop constraint FK860775AC73A7584 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "POLYTOMOUSKEYNODE" not found; SQL statement:
+alter table PolytomousKeyNode drop constraint FK860775A4FEE4393 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "POLYTOMOUSKEYNODE" not found; SQL statement:
+alter table PolytomousKeyNode drop constraint FK860775A808998FB [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "POLYTOMOUSKEYNODE" not found; SQL statement:
+alter table PolytomousKeyNode drop constraint FK860775A9D3C2E93 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "POLYTOMOUSKEYNODE" not found; SQL statement:
+alter table PolytomousKeyNode drop constraint FK860775A4382686A [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "POLYTOMOUSKEYNODE" not found; SQL statement:
+alter table PolytomousKeyNode drop constraint FK860775A1C0483C4 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "POLYTOMOUSKEYNODE" not found; SQL statement:
+alter table PolytomousKeyNode drop constraint FK860775ADE9A3E39 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "POLYTOMOUSKEYNODE_AUD" not found; SQL statement:
+alter table PolytomousKeyNode_AUD drop constraint FK6A6D682B34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "POLYTOMOUSKEYNODE_LANGUAGESTRING" not found; SQL statement:
+alter table PolytomousKeyNode_LanguageString drop constraint FK5574E12EF05D08D4 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "POLYTOMOUSKEYNODE_LANGUAGESTRING" not found; SQL statement:
+alter table PolytomousKeyNode_LanguageString drop constraint FK5574E12E9682414B [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "POLYTOMOUSKEYNODE_LANGUAGESTRING" not found; SQL statement:
+alter table PolytomousKeyNode_LanguageString drop constraint FK5574E12EF135C42B [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "POLYTOMOUSKEYNODE_LANGUAGESTRING_AUD" not found; SQL statement:
+alter table PolytomousKeyNode_LanguageString_AUD drop constraint FKE0D0C7FF34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "POLYTOMOUSKEY_AUD" not found; SQL statement:
+alter table PolytomousKey_AUD drop constraint FK867830934869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "POLYTOMOUSKEY_ANNOTATION" not found; SQL statement:
+alter table PolytomousKey_Annotation drop constraint FK278CF8B61E403E0B [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "POLYTOMOUSKEY_ANNOTATION" not found; SQL statement:
+alter table PolytomousKey_Annotation drop constraint FK278CF8B689D97CB [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "POLYTOMOUSKEY_ANNOTATION_AUD" not found; SQL statement:
+alter table PolytomousKey_Annotation_AUD drop constraint FK3281DB8734869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "POLYTOMOUSKEY_CREDIT" not found; SQL statement:
+alter table PolytomousKey_Credit drop constraint FKADC940032D1B9F [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "POLYTOMOUSKEY_CREDIT" not found; SQL statement:
+alter table PolytomousKey_Credit drop constraint FKADC940089D97CB [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "POLYTOMOUSKEY_CREDIT_AUD" not found; SQL statement:
+alter table PolytomousKey_Credit_AUD drop constraint FK629EC1D134869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "POLYTOMOUSKEY_EXTENSION" not found; SQL statement:
+alter table PolytomousKey_Extension drop constraint FKAE34C1D8927DE9DF [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "POLYTOMOUSKEY_EXTENSION" not found; SQL statement:
+alter table PolytomousKey_Extension drop constraint FKAE34C1D889D97CB [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "POLYTOMOUSKEY_EXTENSION_AUD" not found; SQL statement:
+alter table PolytomousKey_Extension_AUD drop constraint FK1FFC43A934869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "POLYTOMOUSKEY_IDENTIFIER" not found; SQL statement:
+alter table PolytomousKey_Identifier drop constraint FK23C5BA30E12073FF [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "POLYTOMOUSKEY_IDENTIFIER" not found; SQL statement:
+alter table PolytomousKey_Identifier drop constraint FK23C5BA3089D97CB [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "POLYTOMOUSKEY_IDENTIFIER_AUD" not found; SQL statement:
+alter table PolytomousKey_Identifier_AUD drop constraint FKF929500134869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "POLYTOMOUSKEY_MARKER" not found; SQL statement:
+alter table PolytomousKey_Marker drop constraint FK1B037D41777265A1 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "POLYTOMOUSKEY_MARKER" not found; SQL statement:
+alter table PolytomousKey_Marker drop constraint FK1B037D4189D97CB [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "POLYTOMOUSKEY_MARKER_AUD" not found; SQL statement:
+alter table PolytomousKey_Marker_AUD drop constraint FKC6BD229234869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "POLYTOMOUSKEY_NAMEDAREA" not found; SQL statement:
+alter table PolytomousKey_NamedArea drop constraint FK1C727CFF3FF8E7B2 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "POLYTOMOUSKEY_NAMEDAREA" not found; SQL statement:
+alter table PolytomousKey_NamedArea drop constraint FK1C727CFF89D97CB [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "POLYTOMOUSKEY_NAMEDAREA_AUD" not found; SQL statement:
+alter table PolytomousKey_NamedArea_AUD drop constraint FK750A135034869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "POLYTOMOUSKEY_ORIGINALSOURCEBASE" not found; SQL statement:
+alter table PolytomousKey_OriginalSourceBase drop constraint FK839208C43A6735D9 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "POLYTOMOUSKEY_ORIGINALSOURCEBASE" not found; SQL statement:
+alter table PolytomousKey_OriginalSourceBase drop constraint FK839208C489D97CB [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "POLYTOMOUSKEY_ORIGINALSOURCEBASE_AUD" not found; SQL statement:
+alter table PolytomousKey_OriginalSourceBase_AUD drop constraint FKE644349534869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "POLYTOMOUSKEY_RIGHTSINFO" not found; SQL statement:
+alter table PolytomousKey_RightsInfo drop constraint FK328DA4ACC13F7B21 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "POLYTOMOUSKEY_RIGHTSINFO" not found; SQL statement:
+alter table PolytomousKey_RightsInfo drop constraint FK328DA4AC89D97CB [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "POLYTOMOUSKEY_RIGHTSINFO_AUD" not found; SQL statement:
+alter table PolytomousKey_RightsInfo_AUD drop constraint FK34BF9C7D34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "POLYTOMOUSKEY_SCOPE" not found; SQL statement:
+alter table PolytomousKey_Scope drop constraint FK8D97986D5431B96E [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "POLYTOMOUSKEY_SCOPE" not found; SQL statement:
+alter table PolytomousKey_Scope drop constraint FK8D97986D89D97CB [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "POLYTOMOUSKEY_SCOPE_AUD" not found; SQL statement:
+alter table PolytomousKey_Scope_AUD drop constraint FK4E37C7BE34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "POLYTOMOUSKEY_TAXON" not found; SQL statement:
+alter table PolytomousKey_Taxon drop constraint FK8DA4E8E3DE9A3E39 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "POLYTOMOUSKEY_TAXON" not found; SQL statement:
+alter table PolytomousKey_Taxon drop constraint FK8DA4E8E389D97CB [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "POLYTOMOUSKEY_TAXONBASE" not found; SQL statement:
+alter table PolytomousKey_TaxonBase drop constraint FKED8F3A547C3D0017 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "POLYTOMOUSKEY_TAXONBASE" not found; SQL statement:
+alter table PolytomousKey_TaxonBase drop constraint FKED8F3A5489D97CB [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "POLYTOMOUSKEY_TAXONBASE_AUD" not found; SQL statement:
+alter table PolytomousKey_TaxonBase_AUD drop constraint FKC42E1E2534869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "POLYTOMOUSKEY_TAXON_AUD" not found; SQL statement:
+alter table PolytomousKey_Taxon_AUD drop constraint FKED9BED3434869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "PRIMER" not found; SQL statement:
+alter table Primer drop constraint FK8EFB89F34FF2DB2C [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "PRIMER" not found; SQL statement:
+alter table Primer drop constraint FK8EFB89F3BC5DA539 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "PRIMER" not found; SQL statement:
+alter table Primer drop constraint FK8EFB89F36D2CE418 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "PRIMER" not found; SQL statement:
+alter table Primer drop constraint FK8EFB89F3D0374392 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "PRIMER_AUD" not found; SQL statement:
+alter table Primer_AUD drop constraint FK319B864434869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "PRIMER_ANNOTATION" not found; SQL statement:
+alter table Primer_Annotation drop constraint FK9044ED1B1E403E0B [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "PRIMER_ANNOTATION" not found; SQL statement:
+alter table Primer_Annotation drop constraint FK9044ED1B48BD1F55 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "PRIMER_ANNOTATION_AUD" not found; SQL statement:
+alter table Primer_Annotation_AUD drop constraint FKDBAF156C34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "PRIMER_MARKER" not found; SQL statement:
+alter table Primer_Marker drop constraint FKF6C76C26777265A1 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "PRIMER_MARKER" not found; SQL statement:
+alter table Primer_Marker drop constraint FKF6C76C2648BD1F55 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "PRIMER_MARKER_AUD" not found; SQL statement:
+alter table Primer_Marker_AUD drop constraint FK2F7516F734869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "REFERENCE" not found; SQL statement:
+alter table Reference drop constraint FK404D5F2B4FF2DB2C [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "REFERENCE" not found; SQL statement:
+alter table Reference drop constraint FK404D5F2BBC5DA539 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "REFERENCE" not found; SQL statement:
+alter table Reference drop constraint FK404D5F2BD741CE1F [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "REFERENCE" not found; SQL statement:
+alter table Reference drop constraint FK404D5F2BAD54327F [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "REFERENCE" not found; SQL statement:
+alter table Reference drop constraint FK404D5F2B403E17F4 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "REFERENCE" not found; SQL statement:
+alter table Reference drop constraint FK404D5F2BAEC3B8B8 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "REFERENCE_AUD" not found; SQL statement:
+alter table Reference_AUD drop constraint FK8F0FFF7C34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "REFERENCE_ANNOTATION" not found; SQL statement:
+alter table Reference_Annotation drop constraint FKFC824E31E403E0B [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "REFERENCE_ANNOTATION" not found; SQL statement:
+alter table Reference_Annotation drop constraint FKFC824E38D0FB4DA [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "REFERENCE_ANNOTATION_AUD" not found; SQL statement:
+alter table Reference_Annotation_AUD drop constraint FKF3C1293434869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "REFERENCE_CREDIT" not found; SQL statement:
+alter table Reference_Credit drop constraint FK5BC6DEAD32D1B9F [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "REFERENCE_CREDIT" not found; SQL statement:
+alter table Reference_Credit drop constraint FK5BC6DEAD8D0FB4DA [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "REFERENCE_CREDIT_AUD" not found; SQL statement:
+alter table Reference_Credit_AUD drop constraint FK4AD9EDFE34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "REFERENCE_EXTENSION" not found; SQL statement:
+alter table Reference_Extension drop constraint FKDEFCDC0B927DE9DF [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "REFERENCE_EXTENSION" not found; SQL statement:
+alter table Reference_Extension drop constraint FKDEFCDC0B8D0FB4DA [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "REFERENCE_EXTENSION_AUD" not found; SQL statement:
+alter table Reference_Extension_AUD drop constraint FK1DF60C5C34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "REFERENCE_IDENTIFIER" not found; SQL statement:
+alter table Reference_Identifier drop constraint FKC00E65DE12073FF [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "REFERENCE_IDENTIFIER" not found; SQL statement:
+alter table Reference_Identifier drop constraint FKC00E65D8D0FB4DA [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "REFERENCE_IDENTIFIER_AUD" not found; SQL statement:
+alter table Reference_Identifier_AUD drop constraint FKBA689DAE34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "REFERENCE_MARKER" not found; SQL statement:
+alter table Reference_Marker drop constraint FK6BEDC7EE777265A1 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "REFERENCE_MARKER" not found; SQL statement:
+alter table Reference_Marker drop constraint FK6BEDC7EE8D0FB4DA [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "REFERENCE_MARKER_AUD" not found; SQL statement:
+alter table Reference_Marker_AUD drop constraint FKAEF84EBF34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "REFERENCE_MEDIA" not found; SQL statement:
+alter table Reference_Media drop constraint FKBBEF5B0C2C29593 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "REFERENCE_MEDIA" not found; SQL statement:
+alter table Reference_Media drop constraint FKBBEF5B08D0FB4DA [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "REFERENCE_MEDIA_AUD" not found; SQL statement:
+alter table Reference_Media_AUD drop constraint FK8318CB8134869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "REFERENCE_ORIGINALSOURCEBASE" not found; SQL statement:
+alter table Reference_OriginalSourceBase drop constraint FKD3E8B7F13A6735D9 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "REFERENCE_ORIGINALSOURCEBASE" not found; SQL statement:
+alter table Reference_OriginalSourceBase drop constraint FKD3E8B7F18D0FB4DA [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "REFERENCE_ORIGINALSOURCEBASE_AUD" not found; SQL statement:
+alter table Reference_OriginalSourceBase_AUD drop constraint FKC025854234869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "REFERENCE_RIGHTSINFO" not found; SQL statement:
+alter table Reference_RightsInfo drop constraint FK1AC8D0D9C13F7B21 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "REFERENCE_RIGHTSINFO" not found; SQL statement:
+alter table Reference_RightsInfo drop constraint FK1AC8D0D98D0FB4DA [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "REFERENCE_RIGHTSINFO_AUD" not found; SQL statement:
+alter table Reference_RightsInfo_AUD drop constraint FKF5FEEA2A34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "RELATIONSHIPTERMBASE_INVERSEREPRESENTATION" not found; SQL statement:
+alter table RelationshipTermBase_inverseRepresentation drop constraint FK98592F33473FB677 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "RELATIONSHIPTERMBASE_INVERSEREPRESENTATION" not found; SQL statement:
+alter table RelationshipTermBase_inverseRepresentation drop constraint FK98592F33ECEEF4AF [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "RELATIONSHIPTERMBASE_INVERSEREPRESENTATION_AUD" not found; SQL statement:
+alter table RelationshipTermBase_inverseRepresentation_AUD drop constraint FK5D248B8434869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "REPRESENTATION" not found; SQL statement:
+alter table Representation drop constraint FK9C4724ED4FF2DB2C [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "REPRESENTATION" not found; SQL statement:
+alter table Representation drop constraint FK9C4724EDBC5DA539 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "REPRESENTATION" not found; SQL statement:
+alter table Representation drop constraint FK9C4724EDE8D36B00 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "REPRESENTATION_AUD" not found; SQL statement:
+alter table Representation_AUD drop constraint FK294D143E34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "REPRESENTATION_ANNOTATION" not found; SQL statement:
+alter table Representation_Annotation drop constraint FK371091E11E403E0B [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "REPRESENTATION_ANNOTATION" not found; SQL statement:
+alter table Representation_Annotation drop constraint FK371091E147E8AE60 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "REPRESENTATION_ANNOTATION_AUD" not found; SQL statement:
+alter table Representation_Annotation_AUD drop constraint FK36EEE73234869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "REPRESENTATION_MARKER" not found; SQL statement:
+alter table Representation_Marker drop constraint FK560063EC777265A1 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "REPRESENTATION_MARKER" not found; SQL statement:
+alter table Representation_Marker drop constraint FK560063EC47E8AE60 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "REPRESENTATION_MARKER_AUD" not found; SQL statement:
+alter table Representation_Marker_AUD drop constraint FKD640BBBD34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "RIGHTSINFO" not found; SQL statement:
+alter table RightsInfo drop constraint FK252273454FF2DB2C [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "RIGHTSINFO" not found; SQL statement:
+alter table RightsInfo drop constraint FK25227345BC5DA539 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "RIGHTSINFO" not found; SQL statement:
+alter table RightsInfo drop constraint FK25227345E8D36B00 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "RIGHTSINFO" not found; SQL statement:
+alter table RightsInfo drop constraint FK25227345F7976FC5 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "RIGHTSINFO" not found; SQL statement:
+alter table RightsInfo drop constraint FK25227345E6D2D338 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "RIGHTSINFO_AUD" not found; SQL statement:
+alter table RightsInfo_AUD drop constraint FK1CA9769634869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "RIGHTSINFO_ANNOTATION" not found; SQL statement:
+alter table RightsInfo_Annotation drop constraint FKECC95C891E403E0B [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "RIGHTSINFO_ANNOTATION" not found; SQL statement:
+alter table RightsInfo_Annotation drop constraint FKECC95C89EFE62333 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "RIGHTSINFO_ANNOTATION_AUD" not found; SQL statement:
+alter table RightsInfo_Annotation_AUD drop constraint FK78721DDA34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "RIGHTSINFO_MARKER" not found; SQL statement:
+alter table RightsInfo_Marker drop constraint FK81D8C294777265A1 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "RIGHTSINFO_MARKER" not found; SQL statement:
+alter table RightsInfo_Marker drop constraint FK81D8C294EFE62333 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "RIGHTSINFO_MARKER_AUD" not found; SQL statement:
+alter table RightsInfo_Marker_AUD drop constraint FK8BF9866534869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SEQUENCE" not found; SQL statement:
+alter table Sequence drop constraint FK544ADBE14FF2DB2C [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SEQUENCE" not found; SQL statement:
+alter table Sequence drop constraint FK544ADBE1BC5DA539 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SEQUENCE" not found; SQL statement:
+alter table Sequence drop constraint FK544ADBE19F65E72B [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SEQUENCE" not found; SQL statement:
+alter table Sequence drop constraint FK544ADBE16D2CE418 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SEQUENCE" not found; SQL statement:
+alter table Sequence drop constraint FK544ADBE1E671A9DF [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SEQUENCE_AUD" not found; SQL statement:
+alter table Sequence_AUD drop constraint FK39F4313234869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SEQUENCE_ANNOTATION" not found; SQL statement:
+alter table Sequence_Annotation drop constraint FK1010BA6D1E403E0B [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SEQUENCE_ANNOTATION" not found; SQL statement:
+alter table Sequence_Annotation drop constraint FK1010BA6DD57FFDD5 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SEQUENCE_ANNOTATION_AUD" not found; SQL statement:
+alter table Sequence_Annotation_AUD drop constraint FKCB4FE9BE34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SEQUENCE_MARKER" not found; SQL statement:
+alter table Sequence_Marker drop constraint FK3D22B278777265A1 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SEQUENCE_MARKER" not found; SQL statement:
+alter table Sequence_Marker drop constraint FK3D22B278D57FFDD5 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SEQUENCE_MARKER_AUD" not found; SQL statement:
+alter table Sequence_Marker_AUD drop constraint FKAF40E44934869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SEQUENCE_REFERENCE" not found; SQL statement:
+alter table Sequence_Reference drop constraint FK6944904D1DDDC219 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SEQUENCE_REFERENCE" not found; SQL statement:
+alter table Sequence_Reference drop constraint FK6944904DD57FFDD5 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SEQUENCE_REFERENCE_AUD" not found; SQL statement:
+alter table Sequence_Reference_AUD drop constraint FK18E5CF9E34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SINGLEREAD" not found; SQL statement:
+alter table SingleRead drop constraint FKAD45CA1E4FF2DB2C [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SINGLEREAD" not found; SQL statement:
+alter table SingleRead drop constraint FKAD45CA1EBC5DA539 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SINGLEREAD" not found; SQL statement:
+alter table SingleRead drop constraint FKAD45CA1E3DA462D5 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SINGLEREAD" not found; SQL statement:
+alter table SingleRead drop constraint FKAD45CA1ED320A65F [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SINGLEREAD" not found; SQL statement:
+alter table SingleRead drop constraint FKAD45CA1EE0EBCFFE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SINGLEREAD" not found; SQL statement:
+alter table SingleRead drop constraint FKAD45CA1E55DDFE96 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SINGLEREAD" not found; SQL statement:
+alter table SingleRead drop constraint FKAD45CA1E48BD1F55 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SINGLEREADALIGNMENT" not found; SQL statement:
+alter table SingleReadAlignment drop constraint FKE50A79654FF2DB2C [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SINGLEREADALIGNMENT" not found; SQL statement:
+alter table SingleReadAlignment drop constraint FKE50A7965BC5DA539 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SINGLEREADALIGNMENT" not found; SQL statement:
+alter table SingleReadAlignment drop constraint FKE50A7965ECE53A6A [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SINGLEREADALIGNMENT" not found; SQL statement:
+alter table SingleReadAlignment drop constraint FKE50A79653A5A5E15 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SINGLEREADALIGNMENT_AUD" not found; SQL statement:
+alter table SingleReadAlignment_AUD drop constraint FKFEE16CB634869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SINGLEREAD_AUD" not found; SQL statement:
+alter table SingleRead_AUD drop constraint FKA323B8EF34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SINGLEREAD_ANNOTATION" not found; SQL statement:
+alter table SingleRead_Annotation drop constraint FK33E974101E403E0B [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SINGLEREAD_ANNOTATION" not found; SQL statement:
+alter table SingleRead_Annotation drop constraint FK33E974103A5A5E15 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SINGLEREAD_ANNOTATION_AUD" not found; SQL statement:
+alter table SingleRead_Annotation_AUD drop constraint FK7B1D19E134869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SINGLEREAD_MARKER" not found; SQL statement:
+alter table SingleRead_Marker drop constraint FKCF47B59B777265A1 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SINGLEREAD_MARKER" not found; SQL statement:
+alter table SingleRead_Marker drop constraint FKCF47B59B3A5A5E15 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SINGLEREAD_MARKER_AUD" not found; SQL statement:
+alter table SingleRead_Marker_AUD drop constraint FKD3199DEC34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SPECIMENOROBSERVATIONBASE" not found; SQL statement:
+alter table SpecimenOrObservationBase drop constraint FK21CA32724FF2DB2C [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SPECIMENOROBSERVATIONBASE" not found; SQL statement:
+alter table SpecimenOrObservationBase drop constraint FK21CA3272BC5DA539 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SPECIMENOROBSERVATIONBASE" not found; SQL statement:
+alter table SpecimenOrObservationBase drop constraint FK21CA3272F53E6AFA [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SPECIMENOROBSERVATIONBASE" not found; SQL statement:
+alter table SpecimenOrObservationBase drop constraint FK21CA32728C35BD07 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SPECIMENOROBSERVATIONBASE" not found; SQL statement:
+alter table SpecimenOrObservationBase drop constraint FK21CA3272E35D77A3 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SPECIMENOROBSERVATIONBASE" not found; SQL statement:
+alter table SpecimenOrObservationBase drop constraint FK21CA3272EB62BE9A [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SPECIMENOROBSERVATIONBASE" not found; SQL statement:
+alter table SpecimenOrObservationBase drop constraint FK21CA3272156CF96 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SPECIMENOROBSERVATIONBASE" not found; SQL statement:
+alter table SpecimenOrObservationBase drop constraint FK21CA3272C8505DB [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SPECIMENOROBSERVATIONBASE" not found; SQL statement:
+alter table SpecimenOrObservationBase drop constraint FK21CA32727CC340C5 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SPECIMENOROBSERVATIONBASE" not found; SQL statement:
+alter table SpecimenOrObservationBase drop constraint FK21CA327295CC5995 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SPECIMENOROBSERVATIONBASE" not found; SQL statement:
+alter table SpecimenOrObservationBase drop constraint FK21CA32724FF2F98B [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SPECIMENOROBSERVATIONBASE" not found; SQL statement:
+alter table SpecimenOrObservationBase drop constraint FK21CA3272F95F225A [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SPECIMENOROBSERVATIONBASE" not found; SQL statement:
+alter table SpecimenOrObservationBase drop constraint FK21CA3272DADF76EA [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SPECIMENOROBSERVATIONBASE_AUD" not found; SQL statement:
+alter table SpecimenOrObservationBase_AUD drop constraint FKF3D3D74334869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SPECIMENOROBSERVATIONBASE_ANNOTATION" not found; SQL statement:
+alter table SpecimenOrObservationBase_Annotation drop constraint FK365E4F3C1E403E0B [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SPECIMENOROBSERVATIONBASE_ANNOTATION" not found; SQL statement:
+alter table SpecimenOrObservationBase_Annotation drop constraint FK365E4F3C3B8A5ABA [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SPECIMENOROBSERVATIONBASE_ANNOTATION_AUD" not found; SQL statement:
+alter table SpecimenOrObservationBase_Annotation_AUD drop constraint FK34187F0D34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SPECIMENOROBSERVATIONBASE_CREDIT" not found; SQL statement:
+alter table SpecimenOrObservationBase_Credit drop constraint FK7E3A1D8632D1B9F [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SPECIMENOROBSERVATIONBASE_CREDIT" not found; SQL statement:
+alter table SpecimenOrObservationBase_Credit drop constraint FK7E3A1D863B8A5ABA [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SPECIMENOROBSERVATIONBASE_CREDIT_AUD" not found; SQL statement:
+alter table SpecimenOrObservationBase_Credit_AUD drop constraint FK7170185734869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SPECIMENOROBSERVATIONBASE_DERIVATIONEVENT" not found; SQL statement:
+alter table SpecimenOrObservationBase_DerivationEvent drop constraint FK20132036BD59A1AD [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SPECIMENOROBSERVATIONBASE_DERIVATIONEVENT" not found; SQL statement:
+alter table SpecimenOrObservationBase_DerivationEvent drop constraint FK2013203654C216AA [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SPECIMENOROBSERVATIONBASE_DERIVATIONEVENT_AUD" not found; SQL statement:
+alter table SpecimenOrObservationBase_DerivationEvent_AUD drop constraint FKA4A8430734869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SPECIMENOROBSERVATIONBASE_EXTENSION" not found; SQL statement:
+alter table SpecimenOrObservationBase_Extension drop constraint FKE03B8292927DE9DF [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SPECIMENOROBSERVATIONBASE_EXTENSION" not found; SQL statement:
+alter table SpecimenOrObservationBase_Extension drop constraint FKE03B82923B8A5ABA [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SPECIMENOROBSERVATIONBASE_EXTENSION_AUD" not found; SQL statement:
+alter table SpecimenOrObservationBase_Extension_AUD drop constraint FK7AE0176334869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SPECIMENOROBSERVATIONBASE_IDENTIFIER" not found; SQL statement:
+alter table SpecimenOrObservationBase_Identifier drop constraint FK329710B6E12073FF [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SPECIMENOROBSERVATIONBASE_IDENTIFIER" not found; SQL statement:
+alter table SpecimenOrObservationBase_Identifier drop constraint FK329710B63B8A5ABA [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SPECIMENOROBSERVATIONBASE_IDENTIFIER_AUD" not found; SQL statement:
+alter table SpecimenOrObservationBase_Identifier_AUD drop constraint FKFABFF38734869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SPECIMENOROBSERVATIONBASE_LANGUAGESTRING" not found; SQL statement:
+alter table SpecimenOrObservationBase_LanguageString drop constraint FKCFAA9316CD55E0D6 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SPECIMENOROBSERVATIONBASE_LANGUAGESTRING" not found; SQL statement:
+alter table SpecimenOrObservationBase_LanguageString drop constraint FKCFAA93168028C309 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SPECIMENOROBSERVATIONBASE_LANGUAGESTRING" not found; SQL statement:
+alter table SpecimenOrObservationBase_LanguageString drop constraint FKCFAA93163B8A5ABA [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SPECIMENOROBSERVATIONBASE_LANGUAGESTRING_AUD" not found; SQL statement:
+alter table SpecimenOrObservationBase_LanguageString_AUD drop constraint FK38B45E734869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SPECIMENOROBSERVATIONBASE_MARKER" not found; SQL statement:
+alter table SpecimenOrObservationBase_Marker drop constraint FK8E6106C7777265A1 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SPECIMENOROBSERVATIONBASE_MARKER" not found; SQL statement:
+alter table SpecimenOrObservationBase_Marker drop constraint FK8E6106C73B8A5ABA [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SPECIMENOROBSERVATIONBASE_MARKER_AUD" not found; SQL statement:
+alter table SpecimenOrObservationBase_Marker_AUD drop constraint FKD58E791834869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SPECIMENOROBSERVATIONBASE_ORIGINALSOURCEBASE" not found; SQL statement:
+alter table SpecimenOrObservationBase_OriginalSourceBase drop constraint FKCA7F794A3A6735D9 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SPECIMENOROBSERVATIONBASE_ORIGINALSOURCEBASE" not found; SQL statement:
+alter table SpecimenOrObservationBase_OriginalSourceBase drop constraint FKCA7F794A3B8A5ABA [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SPECIMENOROBSERVATIONBASE_ORIGINALSOURCEBASE_AUD" not found; SQL statement:
+alter table SpecimenOrObservationBase_OriginalSourceBase_AUD drop constraint FK2059F21B34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SPECIMENOROBSERVATIONBASE_RIGHTSINFO" not found; SQL statement:
+alter table SpecimenOrObservationBase_RightsInfo drop constraint FK415EFB32C13F7B21 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SPECIMENOROBSERVATIONBASE_RIGHTSINFO" not found; SQL statement:
+alter table SpecimenOrObservationBase_RightsInfo drop constraint FK415EFB323B8A5ABA [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SPECIMENOROBSERVATIONBASE_RIGHTSINFO_AUD" not found; SQL statement:
+alter table SpecimenOrObservationBase_RightsInfo_AUD drop constraint FK3656400334869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "STATEDATA" not found; SQL statement:
+alter table StateData drop constraint FKFB1697BB4FF2DB2C [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "STATEDATA" not found; SQL statement:
+alter table StateData drop constraint FKFB1697BBBC5DA539 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "STATEDATA" not found; SQL statement:
+alter table StateData drop constraint FKFB1697BB9D97028B [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "STATEDATA" not found; SQL statement:
+alter table StateData drop constraint FKFB1697BB682A4E4B [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "STATEDATA_AUD" not found; SQL statement:
+alter table StateData_AUD drop constraint FKDA6A700C34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "STATEDATA_DEFINEDTERMBASE" not found; SQL statement:
+alter table StateData_DefinedTermBase drop constraint FK107321E2F4E35BCD [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "STATEDATA_DEFINEDTERMBASE" not found; SQL statement:
+alter table StateData_DefinedTermBase drop constraint FK107321E28E7BF9AB [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "STATEDATA_DEFINEDTERMBASE_AUD" not found; SQL statement:
+alter table StateData_DefinedTermBase_AUD drop constraint FK7C978EB334869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "STATEDATA_LANGUAGESTRING" not found; SQL statement:
+alter table StateData_LanguageString drop constraint FK93FFD2ADF05D08D4 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "STATEDATA_LANGUAGESTRING" not found; SQL statement:
+alter table StateData_LanguageString drop constraint FK93FFD2AD9682414B [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "STATEDATA_LANGUAGESTRING" not found; SQL statement:
+alter table StateData_LanguageString drop constraint FK93FFD2AD8E7BF9AB [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "STATEDATA_LANGUAGESTRING_AUD" not found; SQL statement:
+alter table StateData_LanguageString_AUD drop constraint FK1578E1FE34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "STATISTICALMEASUREMENTVALUE" not found; SQL statement:
+alter table StatisticalMeasurementValue drop constraint FK2DCE02904FF2DB2C [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "STATISTICALMEASUREMENTVALUE" not found; SQL statement:
+alter table StatisticalMeasurementValue drop constraint FK2DCE0290BC5DA539 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "STATISTICALMEASUREMENTVALUE" not found; SQL statement:
+alter table StatisticalMeasurementValue drop constraint FK2DCE029084A26F69 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "STATISTICALMEASUREMENTVALUE" not found; SQL statement:
+alter table StatisticalMeasurementValue drop constraint FK2DCE02904C428112 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "STATISTICALMEASUREMENTVALUE_AUD" not found; SQL statement:
+alter table StatisticalMeasurementValue_AUD drop constraint FKBB16686134869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "STATISTICALMEASUREMENTVALUE_DEFINEDTERMBASE" not found; SQL statement:
+alter table StatisticalMeasurementValue_DefinedTermBase drop constraint FK686C42B7F4E35BCD [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "STATISTICALMEASUREMENTVALUE_DEFINEDTERMBASE" not found; SQL statement:
+alter table StatisticalMeasurementValue_DefinedTermBase drop constraint FK686C42B75C9F4F2B [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "STATISTICALMEASUREMENTVALUE_DEFINEDTERMBASE_AUD" not found; SQL statement:
+alter table StatisticalMeasurementValue_DefinedTermBase_AUD drop constraint FKFEBA3D0834869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SYNONYMRELATIONSHIP" not found; SQL statement:
+alter table SynonymRelationship drop constraint FKF483ADB34FF2DB2C [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SYNONYMRELATIONSHIP" not found; SQL statement:
+alter table SynonymRelationship drop constraint FKF483ADB3BC5DA539 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SYNONYMRELATIONSHIP" not found; SQL statement:
+alter table SynonymRelationship drop constraint FKF483ADB3AEB7F3BE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SYNONYMRELATIONSHIP" not found; SQL statement:
+alter table SynonymRelationship drop constraint FKF483ADB34BAC703F [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SYNONYMRELATIONSHIP" not found; SQL statement:
+alter table SynonymRelationship drop constraint FKF483ADB3F8991B9D [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SYNONYMRELATIONSHIP" not found; SQL statement:
+alter table SynonymRelationship drop constraint FKF483ADB380924EEC [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SYNONYMRELATIONSHIP_AUD" not found; SQL statement:
+alter table SynonymRelationship_AUD drop constraint FK8AEBCA0434869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SYNONYMRELATIONSHIP_ANNOTATION" not found; SQL statement:
+alter table SynonymRelationship_Annotation drop constraint FKF494F15B1E403E0B [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SYNONYMRELATIONSHIP_ANNOTATION" not found; SQL statement:
+alter table SynonymRelationship_Annotation drop constraint FKF494F15B260A8379 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SYNONYMRELATIONSHIP_ANNOTATION_AUD" not found; SQL statement:
+alter table SynonymRelationship_Annotation_AUD drop constraint FKD3E2F9AC34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SYNONYMRELATIONSHIP_MARKER" not found; SQL statement:
+alter table SynonymRelationship_Marker drop constraint FK7A439066777265A1 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SYNONYMRELATIONSHIP_MARKER" not found; SQL statement:
+alter table SynonymRelationship_Marker drop constraint FK7A439066260A8379 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "SYNONYMRELATIONSHIP_MARKER_AUD" not found; SQL statement:
+alter table SynonymRelationship_Marker_AUD drop constraint FK93C51B3734869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONBASE" not found; SQL statement:
+alter table TaxonBase drop constraint FK9249B49B4FF2DB2C [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONBASE" not found; SQL statement:
+alter table TaxonBase drop constraint FK9249B49BBC5DA539 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONBASE" not found; SQL statement:
+alter table TaxonBase drop constraint FK9249B49B8492378F [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONBASE" not found; SQL statement:
+alter table TaxonBase drop constraint FK9249B49B74FED214 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONBASE" not found; SQL statement:
+alter table TaxonBase drop constraint FK9249B49B7C7B5AED [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONBASE_AUD" not found; SQL statement:
+alter table TaxonBase_AUD drop constraint FK37041CEC34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONBASE_ANNOTATION" not found; SQL statement:
+alter table TaxonBase_Annotation drop constraint FK41ED09731E403E0B [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONBASE_ANNOTATION" not found; SQL statement:
+alter table TaxonBase_Annotation drop constraint FK41ED09739C9D39 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONBASE_ANNOTATION_AUD" not found; SQL statement:
+alter table TaxonBase_Annotation_AUD drop constraint FK8C145C434869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONBASE_CREDIT" not found; SQL statement:
+alter table TaxonBase_Credit drop constraint FK4CB48B3D32D1B9F [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONBASE_CREDIT" not found; SQL statement:
+alter table TaxonBase_Credit drop constraint FK4CB48B3D9C9D39 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONBASE_CREDIT_AUD" not found; SQL statement:
+alter table TaxonBase_Credit_AUD drop constraint FK7CFED28E34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONBASE_EXTENSION" not found; SQL statement:
+alter table TaxonBase_Extension drop constraint FKF961257B927DE9DF [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONBASE_EXTENSION" not found; SQL statement:
+alter table TaxonBase_Extension drop constraint FKF961257B9C9D39 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONBASE_EXTENSION_AUD" not found; SQL statement:
+alter table TaxonBase_Extension_AUD drop constraint FK71381DCC34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONBASE_IDENTIFIER" not found; SQL statement:
+alter table TaxonBase_Identifier drop constraint FK3E25CAEDE12073FF [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONBASE_IDENTIFIER" not found; SQL statement:
+alter table TaxonBase_Identifier drop constraint FK3E25CAED9C9D39 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONBASE_IDENTIFIER_AUD" not found; SQL statement:
+alter table TaxonBase_Identifier_AUD drop constraint FKCF68BA3E34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONBASE_MARKER" not found; SQL statement:
+alter table TaxonBase_Marker drop constraint FK5CDB747E777265A1 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONBASE_MARKER" not found; SQL statement:
+alter table TaxonBase_Marker drop constraint FK5CDB747E9C9D39 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONBASE_MARKER_AUD" not found; SQL statement:
+alter table TaxonBase_Marker_AUD drop constraint FKE11D334F34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONBASE_ORIGINALSOURCEBASE" not found; SQL statement:
+alter table TaxonBase_OriginalSourceBase drop constraint FKFB680C813A6735D9 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONBASE_ORIGINALSOURCEBASE" not found; SQL statement:
+alter table TaxonBase_OriginalSourceBase drop constraint FKFB680C819C9D39 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONBASE_ORIGINALSOURCEBASE_AUD" not found; SQL statement:
+alter table TaxonBase_OriginalSourceBase_AUD drop constraint FKB7C811D234869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONBASE_RIGHTSINFO" not found; SQL statement:
+alter table TaxonBase_RightsInfo drop constraint FK4CEDB569C13F7B21 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONBASE_RIGHTSINFO" not found; SQL statement:
+alter table TaxonBase_RightsInfo drop constraint FK4CEDB5699C9D39 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONBASE_RIGHTSINFO_AUD" not found; SQL statement:
+alter table TaxonBase_RightsInfo_AUD drop constraint FKAFF06BA34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONINTERACTION_LANGUAGESTRING" not found; SQL statement:
+alter table TaxonInteraction_LanguageString drop constraint FK579A1DC02BEBA58D [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONINTERACTION_LANGUAGESTRING" not found; SQL statement:
+alter table TaxonInteraction_LanguageString drop constraint FK579A1DC028459272 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONINTERACTION_LANGUAGESTRING" not found; SQL statement:
+alter table TaxonInteraction_LanguageString drop constraint FK579A1DC086C86FE0 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONINTERACTION_LANGUAGESTRING_AUD" not found; SQL statement:
+alter table TaxonInteraction_LanguageString_AUD drop constraint FK9E016B9134869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONNAMEBASE" not found; SQL statement:
+alter table TaxonNameBase drop constraint FKB4870C64FF2DB2C [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONNAMEBASE" not found; SQL statement:
+alter table TaxonNameBase drop constraint FKB4870C6BC5DA539 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONNAMEBASE" not found; SQL statement:
+alter table TaxonNameBase drop constraint FKB4870C6BFEAE500 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONNAMEBASE" not found; SQL statement:
+alter table TaxonNameBase drop constraint FKB4870C6617E62B3 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONNAMEBASE" not found; SQL statement:
+alter table TaxonNameBase drop constraint FKB4870C6D7BE55A0 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONNAMEBASE" not found; SQL statement:
+alter table TaxonNameBase drop constraint FKB4870C6FBFA5597 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONNAMEBASE" not found; SQL statement:
+alter table TaxonNameBase drop constraint FKB4870C681F5DBB0 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONNAMEBASE" not found; SQL statement:
+alter table TaxonNameBase drop constraint FKB4870C6503B46C4 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONNAMEBASE" not found; SQL statement:
+alter table TaxonNameBase drop constraint FKB4870C63357BF63 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONNAMEBASE_AUD" not found; SQL statement:
+alter table TaxonNameBase_AUD drop constraint FK5CA2CB9734869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONNAMEBASE_ANNOTATION" not found; SQL statement:
+alter table TaxonNameBase_Annotation drop constraint FK9E7794681E403E0B [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONNAMEBASE_ANNOTATION" not found; SQL statement:
+alter table TaxonNameBase_Annotation drop constraint FK9E7794688C85CF94 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONNAMEBASE_ANNOTATION_AUD" not found; SQL statement:
+alter table TaxonNameBase_Annotation_AUD drop constraint FKB6734E3934869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONNAMEBASE_CREDIT" not found; SQL statement:
+alter table TaxonNameBase_Credit drop constraint FK29BCD8B232D1B9F [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONNAMEBASE_CREDIT" not found; SQL statement:
+alter table TaxonNameBase_Credit drop constraint FK29BCD8B28C85CF94 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONNAMEBASE_CREDIT_AUD" not found; SQL statement:
+alter table TaxonNameBase_Credit_AUD drop constraint FKD9895D8334869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONNAMEBASE_EXTENSION" not found; SQL statement:
+alter table TaxonNameBase_Extension drop constraint FKC28EE7E6927DE9DF [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONNAMEBASE_EXTENSION" not found; SQL statement:
+alter table TaxonNameBase_Extension drop constraint FKC28EE7E68C85CF94 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONNAMEBASE_EXTENSION_AUD" not found; SQL statement:
+alter table TaxonNameBase_Extension_AUD drop constraint FK8F98B2B734869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONNAMEBASE_IDENTIFIER" not found; SQL statement:
+alter table TaxonNameBase_Identifier drop constraint FK9AB055E2E12073FF [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONNAMEBASE_IDENTIFIER" not found; SQL statement:
+alter table TaxonNameBase_Identifier drop constraint FK9AB055E28C85CF94 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONNAMEBASE_IDENTIFIER_AUD" not found; SQL statement:
+alter table TaxonNameBase_Identifier_AUD drop constraint FK7D1AC2B334869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONNAMEBASE_MARKER" not found; SQL statement:
+alter table TaxonNameBase_Marker drop constraint FK39E3C1F3777265A1 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONNAMEBASE_MARKER" not found; SQL statement:
+alter table TaxonNameBase_Marker drop constraint FK39E3C1F38C85CF94 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONNAMEBASE_MARKER_AUD" not found; SQL statement:
+alter table TaxonNameBase_Marker_AUD drop constraint FK3DA7BE4434869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONNAMEBASE_NOMENCLATURALSTATUS" not found; SQL statement:
+alter table TaxonNameBase_NomenclaturalStatus drop constraint FK560BA7926615E90D [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONNAMEBASE_NOMENCLATURALSTATUS" not found; SQL statement:
+alter table TaxonNameBase_NomenclaturalStatus drop constraint FK560BA7928C85CF94 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONNAMEBASE_NOMENCLATURALSTATUS_AUD" not found; SQL statement:
+alter table TaxonNameBase_NomenclaturalStatus_AUD drop constraint FK9215BC6334869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONNAMEBASE_ORIGINALSOURCEBASE" not found; SQL statement:
+alter table TaxonNameBase_OriginalSourceBase drop constraint FKF746D2763A6735D9 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONNAMEBASE_ORIGINALSOURCEBASE" not found; SQL statement:
+alter table TaxonNameBase_OriginalSourceBase drop constraint FKF746D2768C85CF94 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONNAMEBASE_ORIGINALSOURCEBASE_AUD" not found; SQL statement:
+alter table TaxonNameBase_OriginalSourceBase_AUD drop constraint FK7A38D54734869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONNAMEBASE_RIGHTSINFO" not found; SQL statement:
+alter table TaxonNameBase_RightsInfo drop constraint FKA978405EC13F7B21 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONNAMEBASE_RIGHTSINFO" not found; SQL statement:
+alter table TaxonNameBase_RightsInfo drop constraint FKA978405E8C85CF94 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONNAMEBASE_RIGHTSINFO_AUD" not found; SQL statement:
+alter table TaxonNameBase_RightsInfo_AUD drop constraint FKB8B10F2F34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONNAMEBASE_TYPEDESIGNATIONBASE" not found; SQL statement:
+alter table TaxonNameBase_TypeDesignationBase drop constraint FKC0D6BBB5C7DF530C [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONNAMEBASE_TYPEDESIGNATIONBASE" not found; SQL statement:
+alter table TaxonNameBase_TypeDesignationBase drop constraint FKC0D6BBB58C85CF94 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONNAMEBASE_TYPEDESIGNATIONBASE_AUD" not found; SQL statement:
+alter table TaxonNameBase_TypeDesignationBase_AUD drop constraint FKBB24070634869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONNODE" not found; SQL statement:
+alter table TaxonNode drop constraint FK924F5BCC4FF2DB2C [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONNODE" not found; SQL statement:
+alter table TaxonNode drop constraint FK924F5BCCBC5DA539 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONNODE" not found; SQL statement:
+alter table TaxonNode drop constraint FK924F5BCC84A3CE1B [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONNODE" not found; SQL statement:
+alter table TaxonNode drop constraint FK924F5BCC39DB2DFB [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONNODE" not found; SQL statement:
+alter table TaxonNode drop constraint FK924F5BCC381381B5 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONNODE" not found; SQL statement:
+alter table TaxonNode drop constraint FK924F5BCCCC05993E [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONNODE" not found; SQL statement:
+alter table TaxonNode drop constraint FK924F5BCCDE9A3E39 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONNODEAGENTRELATION" not found; SQL statement:
+alter table TaxonNodeAgentRelation drop constraint FK28D12BB54FF2DB2C [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONNODEAGENTRELATION" not found; SQL statement:
+alter table TaxonNodeAgentRelation drop constraint FK28D12BB5BC5DA539 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONNODEAGENTRELATION" not found; SQL statement:
+alter table TaxonNodeAgentRelation drop constraint FK28D12BB58EB3A8A1 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONNODEAGENTRELATION" not found; SQL statement:
+alter table TaxonNodeAgentRelation drop constraint FK28D12BB5927D8399 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONNODEAGENTRELATION" not found; SQL statement:
+alter table TaxonNodeAgentRelation drop constraint FK28D12BB5E67FC44F [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONNODEAGENTRELATION_AUD" not found; SQL statement:
+alter table TaxonNodeAgentRelation_AUD drop constraint FKC066770634869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONNODEAGENTRELATION_ANNOTATION" not found; SQL statement:
+alter table TaxonNodeAgentRelation_Annotation drop constraint FK7CEFFE191E403E0B [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONNODEAGENTRELATION_ANNOTATION" not found; SQL statement:
+alter table TaxonNodeAgentRelation_Annotation drop constraint FK7CEFFE193F9CAA9B [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONNODEAGENTRELATION_ANNOTATION_AUD" not found; SQL statement:
+alter table TaxonNodeAgentRelation_Annotation_AUD drop constraint FK6A4D776A34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONNODEAGENTRELATION_MARKER" not found; SQL statement:
+alter table TaxonNodeAgentRelation_Marker drop constraint FKE92EAC24777265A1 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONNODEAGENTRELATION_MARKER" not found; SQL statement:
+alter table TaxonNodeAgentRelation_Marker drop constraint FKE92EAC243F9CAA9B [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONNODEAGENTRELATION_MARKER_AUD" not found; SQL statement:
+alter table TaxonNodeAgentRelation_Marker_AUD drop constraint FK1C2027F534869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONNODE_AUD" not found; SQL statement:
+alter table TaxonNode_AUD drop constraint FKE090C39D34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONNODE_ANNOTATION" not found; SQL statement:
+alter table TaxonNode_Annotation drop constraint FKD8A9A9A21E403E0B [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONNODE_ANNOTATION" not found; SQL statement:
+alter table TaxonNode_Annotation drop constraint FKD8A9A9A2927D8399 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONNODE_ANNOTATION_AUD" not found; SQL statement:
+alter table TaxonNode_Annotation_AUD drop constraint FKB2C4367334869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONNODE_MARKER" not found; SQL statement:
+alter table TaxonNode_Marker drop constraint FK395842D777265A1 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONNODE_MARKER" not found; SQL statement:
+alter table TaxonNode_Marker drop constraint FK395842D927D8399 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONNODE_MARKER_AUD" not found; SQL statement:
+alter table TaxonNode_Marker_AUD drop constraint FK77D9D37E34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONRELATIONSHIP" not found; SQL statement:
+alter table TaxonRelationship drop constraint FK7482BA024FF2DB2C [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONRELATIONSHIP" not found; SQL statement:
+alter table TaxonRelationship drop constraint FK7482BA02BC5DA539 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONRELATIONSHIP" not found; SQL statement:
+alter table TaxonRelationship drop constraint FK7482BA02AEB7F3BE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONRELATIONSHIP" not found; SQL statement:
+alter table TaxonRelationship drop constraint FK7482BA02E71EF6CE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONRELATIONSHIP" not found; SQL statement:
+alter table TaxonRelationship drop constraint FK7482BA02F8991B9D [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONRELATIONSHIP" not found; SQL statement:
+alter table TaxonRelationship drop constraint FK7482BA02F11BD77B [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONRELATIONSHIP_AUD" not found; SQL statement:
+alter table TaxonRelationship_AUD drop constraint FKA0DE16D334869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONRELATIONSHIP_ANNOTATION" not found; SQL statement:
+alter table TaxonRelationship_Annotation drop constraint FK82C86DAC1E403E0B [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONRELATIONSHIP_ANNOTATION" not found; SQL statement:
+alter table TaxonRelationship_Annotation drop constraint FK82C86DAC2BD180D9 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONRELATIONSHIP_ANNOTATION_AUD" not found; SQL statement:
+alter table TaxonRelationship_Annotation_AUD drop constraint FKE86DE57D34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONRELATIONSHIP_MARKER" not found; SQL statement:
+alter table TaxonRelationship_Marker drop constraint FK69FBDD37777265A1 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONRELATIONSHIP_MARKER" not found; SQL statement:
+alter table TaxonRelationship_Marker drop constraint FK69FBDD372BD180D9 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TAXONRELATIONSHIP_MARKER_AUD" not found; SQL statement:
+alter table TaxonRelationship_Marker_AUD drop constraint FK21F8978834869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TERMVOCABULARY" not found; SQL statement:
+alter table TermVocabulary drop constraint FK487AA6924FF2DB2C [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TERMVOCABULARY" not found; SQL statement:
+alter table TermVocabulary drop constraint FK487AA692BC5DA539 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TERMVOCABULARY_AUD" not found; SQL statement:
+alter table TermVocabulary_AUD drop constraint FKA6ED3B6334869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TERMVOCABULARY_ANNOTATION" not found; SQL statement:
+alter table TermVocabulary_Annotation drop constraint FK76D2071C1E403E0B [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TERMVOCABULARY_ANNOTATION" not found; SQL statement:
+alter table TermVocabulary_Annotation drop constraint FK76D2071C258E060 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TERMVOCABULARY_ANNOTATION_AUD" not found; SQL statement:
+alter table TermVocabulary_Annotation_AUD drop constraint FK222D46ED34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TERMVOCABULARY_CREDIT" not found; SQL statement:
+alter table TermVocabulary_Credit drop constraint FK7604C56632D1B9F [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TERMVOCABULARY_CREDIT" not found; SQL statement:
+alter table TermVocabulary_Credit drop constraint FK7604C566258E060 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TERMVOCABULARY_CREDIT_AUD" not found; SQL statement:
+alter table TermVocabulary_Credit_AUD drop constraint FKB1E3D03734869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TERMVOCABULARY_EXTENSION" not found; SQL statement:
+alter table TermVocabulary_Extension drop constraint FKA8814EB2927DE9DF [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TERMVOCABULARY_EXTENSION" not found; SQL statement:
+alter table TermVocabulary_Extension drop constraint FKA8814EB2258E060 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TERMVOCABULARY_EXTENSION_AUD" not found; SQL statement:
+alter table TermVocabulary_Extension_AUD drop constraint FKD522D38334869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TERMVOCABULARY_IDENTIFIER" not found; SQL statement:
+alter table TermVocabulary_Identifier drop constraint FK730AC896E12073FF [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TERMVOCABULARY_IDENTIFIER" not found; SQL statement:
+alter table TermVocabulary_Identifier drop constraint FK730AC896258E060 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TERMVOCABULARY_IDENTIFIER_AUD" not found; SQL statement:
+alter table TermVocabulary_Identifier_AUD drop constraint FKE8D4BB6734869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TERMVOCABULARY_MARKER" not found; SQL statement:
+alter table TermVocabulary_Marker drop constraint FK862BAEA7777265A1 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TERMVOCABULARY_MARKER" not found; SQL statement:
+alter table TermVocabulary_Marker drop constraint FK862BAEA7258E060 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TERMVOCABULARY_MARKER_AUD" not found; SQL statement:
+alter table TermVocabulary_Marker_AUD drop constraint FK160230F834869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TERMVOCABULARY_ORIGINALSOURCEBASE" not found; SQL statement:
+alter table TermVocabulary_OriginalSourceBase drop constraint FK8F2D512A3A6735D9 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TERMVOCABULARY_ORIGINALSOURCEBASE" not found; SQL statement:
+alter table TermVocabulary_OriginalSourceBase drop constraint FK8F2D512A258E060 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TERMVOCABULARY_ORIGINALSOURCEBASE_AUD" not found; SQL statement:
+alter table TermVocabulary_OriginalSourceBase_AUD drop constraint FKA898D9FB34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TERMVOCABULARY_REPRESENTATION" not found; SQL statement:
+alter table TermVocabulary_Representation drop constraint FKA408B63AB31C4747 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TERMVOCABULARY_REPRESENTATION" not found; SQL statement:
+alter table TermVocabulary_Representation drop constraint FKA408B63A258E060 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TERMVOCABULARY_REPRESENTATION_AUD" not found; SQL statement:
+alter table TermVocabulary_Representation_AUD drop constraint FK681B370B34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TERMVOCABULARY_RIGHTSINFO" not found; SQL statement:
+alter table TermVocabulary_RightsInfo drop constraint FK81D2B312C13F7B21 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TERMVOCABULARY_RIGHTSINFO" not found; SQL statement:
+alter table TermVocabulary_RightsInfo drop constraint FK81D2B312258E060 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TERMVOCABULARY_RIGHTSINFO_AUD" not found; SQL statement:
+alter table TermVocabulary_RightsInfo_AUD drop constraint FK246B07E334869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TYPEDESIGNATIONBASE" not found; SQL statement:
+alter table TypeDesignationBase drop constraint FK8AC9DCAE4FF2DB2C [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TYPEDESIGNATIONBASE" not found; SQL statement:
+alter table TypeDesignationBase drop constraint FK8AC9DCAEBC5DA539 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TYPEDESIGNATIONBASE" not found; SQL statement:
+alter table TypeDesignationBase drop constraint FK8AC9DCAEAEB7F3BE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TYPEDESIGNATIONBASE" not found; SQL statement:
+alter table TypeDesignationBase drop constraint FK8AC9DCAE9E3ED08 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TYPEDESIGNATIONBASE" not found; SQL statement:
+alter table TypeDesignationBase drop constraint FK8AC9DCAE4CB0F315 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TYPEDESIGNATIONBASE" not found; SQL statement:
+alter table TypeDesignationBase drop constraint FK8AC9DCAEFBFA41D9 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TYPEDESIGNATIONBASE_AUD" not found; SQL statement:
+alter table TypeDesignationBase_AUD drop constraint FK243C037F34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TYPEDESIGNATIONBASE_ANNOTATION" not found; SQL statement:
+alter table TypeDesignationBase_Annotation drop constraint FK4D7327801E403E0B [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TYPEDESIGNATIONBASE_ANNOTATION" not found; SQL statement:
+alter table TypeDesignationBase_Annotation drop constraint FK4D73278044E9E6D4 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TYPEDESIGNATIONBASE_ANNOTATION_AUD" not found; SQL statement:
+alter table TypeDesignationBase_Annotation_AUD drop constraint FK88BF955134869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TYPEDESIGNATIONBASE_MARKER" not found; SQL statement:
+alter table TypeDesignationBase_Marker drop constraint FKB914A10B777265A1 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TYPEDESIGNATIONBASE_MARKER" not found; SQL statement:
+alter table TypeDesignationBase_Marker drop constraint FKB914A10B44E9E6D4 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "TYPEDESIGNATIONBASE_MARKER_AUD" not found; SQL statement:
+alter table TypeDesignationBase_Marker_AUD drop constraint FKECA3515C34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "USERACCOUNT" not found; SQL statement:
+alter table UserAccount drop constraint FKB3F13C24FF2DB2C [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "USERACCOUNT" not found; SQL statement:
+alter table UserAccount drop constraint FKB3F13C2AAC1B820 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "USERACCOUNT_AUD" not found; SQL statement:
+alter table UserAccount_AUD drop constraint FK6A57909334869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "USERACCOUNT_GRANTEDAUTHORITYIMPL" not found; SQL statement:
+alter table UserAccount_GrantedAuthorityImpl drop constraint FKFD724D851857F6C2 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "USERACCOUNT_GRANTEDAUTHORITYIMPL" not found; SQL statement:
+alter table UserAccount_GrantedAuthorityImpl drop constraint FKFD724D855EA5DD89 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "USERACCOUNT_PERMISSIONGROUP" not found; SQL statement:
+alter table UserAccount_PermissionGroup drop constraint FK812DE753DA9DCB5F [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "USERACCOUNT_PERMISSIONGROUP" not found; SQL statement:
+alter table UserAccount_PermissionGroup drop constraint FK812DE753887E3D12 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "WORKINGSET" not found; SQL statement:
+alter table WorkingSet drop constraint FK668D5B914FF2DB2C [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "WORKINGSET" not found; SQL statement:
+alter table WorkingSet drop constraint FK668D5B91BC5DA539 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "WORKINGSET" not found; SQL statement:
+alter table WorkingSet drop constraint FK668D5B9123DB7F04 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "WORKINGSET_AUD" not found; SQL statement:
+alter table WorkingSet_AUD drop constraint FK628F58E234869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "WORKINGSET_ANNOTATION" not found; SQL statement:
+alter table WorkingSet_Annotation drop constraint FKCBBA8CBD1E403E0B [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "WORKINGSET_ANNOTATION" not found; SQL statement:
+alter table WorkingSet_Annotation drop constraint FKCBBA8CBDBBD2C869 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "WORKINGSET_ANNOTATION_AUD" not found; SQL statement:
+alter table WorkingSet_Annotation_AUD drop constraint FK1E28140E34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "WORKINGSET_DESCRIPTIONBASE" not found; SQL statement:
+alter table WorkingSet_DescriptionBase drop constraint FK731CC81F33B8A841 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "WORKINGSET_DESCRIPTIONBASE" not found; SQL statement:
+alter table WorkingSet_DescriptionBase drop constraint FK731CC81FBBD2C869 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "WORKINGSET_DESCRIPTIONBASE_AUD" not found; SQL statement:
+alter table WorkingSet_DescriptionBase_AUD drop constraint FK8959CE7034869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "WORKINGSET_MARKER" not found; SQL statement:
+alter table WorkingSet_Marker drop constraint FK9CB22CC8777265A1 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "WORKINGSET_MARKER" not found; SQL statement:
+alter table WorkingSet_Marker drop constraint FK9CB22CC8BBD2C869 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "WORKINGSET_MARKER_AUD" not found; SQL statement:
+alter table WorkingSet_Marker_AUD drop constraint FK6AEAB69934869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "WORKINGSET_REPRESENTATION" not found; SQL statement:
+alter table WorkingSet_Representation drop constraint FKA003835BB31C4747 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "WORKINGSET_REPRESENTATION" not found; SQL statement:
+alter table WorkingSet_Representation drop constraint FKA003835BBBD2C869 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "WORKINGSET_REPRESENTATION_AUD" not found; SQL statement:
+alter table WorkingSet_Representation_AUD drop constraint FK21B88BAC34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "WORKINGSET_TAXONBASE" not found; SQL statement:
+alter table WorkingSet_TaxonBase drop constraint FK34EB896D7C3D0017 [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "WORKINGSET_TAXONBASE" not found; SQL statement:
+alter table WorkingSet_TaxonBase drop constraint FK34EB896DB4555A9A [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Table "WORKINGSET_TAXONBASE_AUD" not found; SQL statement:
+alter table WorkingSet_TaxonBase_AUD drop constraint FK582B38BE34869AAE [42102-170]
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Constraint "_UNIQUEKEY" already exists; SQL statement:
+alter table AgentBase add constraint _UniqueKey unique (uuid) [90045-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.command.ddl.AlterTableAddConstraint.tryUpdate(AlterTableAddConstraint.java:89)
+ at org.h2.command.ddl.AlterTableAddConstraint.update(AlterTableAddConstraint.java:68)
+ at org.h2.command.CommandContainer.update(CommandContainer.java:75)
+ at org.h2.command.Command.executeUpdate(Command.java:230)
+ at org.h2.jdbc.JdbcStatement.executeUpdateInternal(JdbcStatement.java:125)
+ at org.h2.jdbc.JdbcStatement.executeUpdate(JdbcStatement.java:110)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.hibernate.tool.hbm2ddl.DatabaseExporter.export(DatabaseExporter.java:64)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.perform(SchemaExport.java:418)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.execute(SchemaExport.java:375)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:304)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:293)
+ at org.hibernate.internal.SessionFactoryImpl.<init>(SessionFactoryImpl.java:498)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1743)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1781)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBuilder.buildSessionFactory(LocalSessionFactoryBuilder.java:247)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.buildSessionFactory(LocalSessionFactoryBean.java:373)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.afterPropertiesSet(LocalSessionFactoryBean.java:358)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1547)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1485)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:524)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:323)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:107)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1393)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1134)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:522)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:626)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.preInstantiateSingletons(MonitoredListableBeanFactory.java:71)
+ at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:932)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.finishBeanFactoryInitialization(MonitoredGenericApplicationContext.java:74)
+ at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:479)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.refresh(MonitoredGenericApplicationContext.java:102)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.setNewDataSource(CdmApplicationController.java:264)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.<init>(CdmApplicationController.java:204)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.NewInstance(CdmApplicationController.java:148)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.getApplicationController(CdmStoreConnector.java:151)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.run(CdmStoreConnector.java:99)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Constraint "_UNIQUEKEY" already exists; SQL statement:
+alter table Amplification add constraint _UniqueKey unique (uuid) [90045-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.command.ddl.AlterTableAddConstraint.tryUpdate(AlterTableAddConstraint.java:89)
+ at org.h2.command.ddl.AlterTableAddConstraint.update(AlterTableAddConstraint.java:68)
+ at org.h2.command.CommandContainer.update(CommandContainer.java:75)
+ at org.h2.command.Command.executeUpdate(Command.java:230)
+ at org.h2.jdbc.JdbcStatement.executeUpdateInternal(JdbcStatement.java:125)
+ at org.h2.jdbc.JdbcStatement.executeUpdate(JdbcStatement.java:110)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.hibernate.tool.hbm2ddl.DatabaseExporter.export(DatabaseExporter.java:64)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.perform(SchemaExport.java:418)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.execute(SchemaExport.java:375)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:304)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:293)
+ at org.hibernate.internal.SessionFactoryImpl.<init>(SessionFactoryImpl.java:498)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1743)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1781)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBuilder.buildSessionFactory(LocalSessionFactoryBuilder.java:247)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.buildSessionFactory(LocalSessionFactoryBean.java:373)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.afterPropertiesSet(LocalSessionFactoryBean.java:358)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1547)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1485)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:524)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:323)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:107)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1393)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1134)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:522)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:626)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.preInstantiateSingletons(MonitoredListableBeanFactory.java:71)
+ at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:932)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.finishBeanFactoryInitialization(MonitoredGenericApplicationContext.java:74)
+ at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:479)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.refresh(MonitoredGenericApplicationContext.java:102)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.setNewDataSource(CdmApplicationController.java:264)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.<init>(CdmApplicationController.java:204)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.NewInstance(CdmApplicationController.java:148)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.getApplicationController(CdmStoreConnector.java:151)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.run(CdmStoreConnector.java:99)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Constraint "_UNIQUEKEY" already exists; SQL statement:
+alter table AmplificationResult add constraint _UniqueKey unique (uuid) [90045-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.command.ddl.AlterTableAddConstraint.tryUpdate(AlterTableAddConstraint.java:89)
+ at org.h2.command.ddl.AlterTableAddConstraint.update(AlterTableAddConstraint.java:68)
+ at org.h2.command.CommandContainer.update(CommandContainer.java:75)
+ at org.h2.command.Command.executeUpdate(Command.java:230)
+ at org.h2.jdbc.JdbcStatement.executeUpdateInternal(JdbcStatement.java:125)
+ at org.h2.jdbc.JdbcStatement.executeUpdate(JdbcStatement.java:110)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.hibernate.tool.hbm2ddl.DatabaseExporter.export(DatabaseExporter.java:64)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.perform(SchemaExport.java:418)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.execute(SchemaExport.java:375)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:304)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:293)
+ at org.hibernate.internal.SessionFactoryImpl.<init>(SessionFactoryImpl.java:498)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1743)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1781)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBuilder.buildSessionFactory(LocalSessionFactoryBuilder.java:247)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.buildSessionFactory(LocalSessionFactoryBean.java:373)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.afterPropertiesSet(LocalSessionFactoryBean.java:358)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1547)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1485)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:524)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:323)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:107)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1393)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1134)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:522)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:626)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.preInstantiateSingletons(MonitoredListableBeanFactory.java:71)
+ at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:932)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.finishBeanFactoryInitialization(MonitoredGenericApplicationContext.java:74)
+ at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:479)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.refresh(MonitoredGenericApplicationContext.java:102)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.setNewDataSource(CdmApplicationController.java:264)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.<init>(CdmApplicationController.java:204)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.NewInstance(CdmApplicationController.java:148)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.getApplicationController(CdmStoreConnector.java:151)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.run(CdmStoreConnector.java:99)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Constraint "_UNIQUEKEY" already exists; SQL statement:
+alter table Annotation add constraint _UniqueKey unique (uuid) [90045-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.command.ddl.AlterTableAddConstraint.tryUpdate(AlterTableAddConstraint.java:89)
+ at org.h2.command.ddl.AlterTableAddConstraint.update(AlterTableAddConstraint.java:68)
+ at org.h2.command.CommandContainer.update(CommandContainer.java:75)
+ at org.h2.command.Command.executeUpdate(Command.java:230)
+ at org.h2.jdbc.JdbcStatement.executeUpdateInternal(JdbcStatement.java:125)
+ at org.h2.jdbc.JdbcStatement.executeUpdate(JdbcStatement.java:110)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.hibernate.tool.hbm2ddl.DatabaseExporter.export(DatabaseExporter.java:64)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.perform(SchemaExport.java:418)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.execute(SchemaExport.java:375)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:304)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:293)
+ at org.hibernate.internal.SessionFactoryImpl.<init>(SessionFactoryImpl.java:498)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1743)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1781)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBuilder.buildSessionFactory(LocalSessionFactoryBuilder.java:247)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.buildSessionFactory(LocalSessionFactoryBean.java:373)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.afterPropertiesSet(LocalSessionFactoryBean.java:358)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1547)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1485)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:524)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:323)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:107)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1393)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1134)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:522)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:626)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.preInstantiateSingletons(MonitoredListableBeanFactory.java:71)
+ at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:932)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.finishBeanFactoryInitialization(MonitoredGenericApplicationContext.java:74)
+ at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:479)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.refresh(MonitoredGenericApplicationContext.java:102)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.setNewDataSource(CdmApplicationController.java:264)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.<init>(CdmApplicationController.java:204)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.NewInstance(CdmApplicationController.java:148)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.getApplicationController(CdmStoreConnector.java:151)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.run(CdmStoreConnector.java:99)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Constraint "_UNIQUEKEY" already exists; SQL statement:
+alter table CdmMetaData add constraint _UniqueKey unique (uuid) [90045-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.command.ddl.AlterTableAddConstraint.tryUpdate(AlterTableAddConstraint.java:89)
+ at org.h2.command.ddl.AlterTableAddConstraint.update(AlterTableAddConstraint.java:68)
+ at org.h2.command.CommandContainer.update(CommandContainer.java:75)
+ at org.h2.command.Command.executeUpdate(Command.java:230)
+ at org.h2.jdbc.JdbcStatement.executeUpdateInternal(JdbcStatement.java:125)
+ at org.h2.jdbc.JdbcStatement.executeUpdate(JdbcStatement.java:110)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.hibernate.tool.hbm2ddl.DatabaseExporter.export(DatabaseExporter.java:64)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.perform(SchemaExport.java:418)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.execute(SchemaExport.java:375)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:304)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:293)
+ at org.hibernate.internal.SessionFactoryImpl.<init>(SessionFactoryImpl.java:498)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1743)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1781)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBuilder.buildSessionFactory(LocalSessionFactoryBuilder.java:247)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.buildSessionFactory(LocalSessionFactoryBean.java:373)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.afterPropertiesSet(LocalSessionFactoryBean.java:358)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1547)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1485)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:524)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:323)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:107)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1393)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1134)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:522)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:626)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.preInstantiateSingletons(MonitoredListableBeanFactory.java:71)
+ at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:932)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.finishBeanFactoryInitialization(MonitoredGenericApplicationContext.java:74)
+ at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:479)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.refresh(MonitoredGenericApplicationContext.java:102)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.setNewDataSource(CdmApplicationController.java:264)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.<init>(CdmApplicationController.java:204)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.NewInstance(CdmApplicationController.java:148)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.getApplicationController(CdmStoreConnector.java:151)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.run(CdmStoreConnector.java:99)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Constraint "_UNIQUEKEY" already exists; SQL statement:
+alter table Classification add constraint _UniqueKey unique (uuid) [90045-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.command.ddl.AlterTableAddConstraint.tryUpdate(AlterTableAddConstraint.java:89)
+ at org.h2.command.ddl.AlterTableAddConstraint.update(AlterTableAddConstraint.java:68)
+ at org.h2.command.CommandContainer.update(CommandContainer.java:75)
+ at org.h2.command.Command.executeUpdate(Command.java:230)
+ at org.h2.jdbc.JdbcStatement.executeUpdateInternal(JdbcStatement.java:125)
+ at org.h2.jdbc.JdbcStatement.executeUpdate(JdbcStatement.java:110)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.hibernate.tool.hbm2ddl.DatabaseExporter.export(DatabaseExporter.java:64)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.perform(SchemaExport.java:418)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.execute(SchemaExport.java:375)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:304)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:293)
+ at org.hibernate.internal.SessionFactoryImpl.<init>(SessionFactoryImpl.java:498)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1743)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1781)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBuilder.buildSessionFactory(LocalSessionFactoryBuilder.java:247)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.buildSessionFactory(LocalSessionFactoryBean.java:373)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.afterPropertiesSet(LocalSessionFactoryBean.java:358)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1547)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1485)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:524)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:323)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:107)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1393)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1134)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:522)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:626)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.preInstantiateSingletons(MonitoredListableBeanFactory.java:71)
+ at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:932)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.finishBeanFactoryInitialization(MonitoredGenericApplicationContext.java:74)
+ at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:479)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.refresh(MonitoredGenericApplicationContext.java:102)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.setNewDataSource(CdmApplicationController.java:264)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.<init>(CdmApplicationController.java:204)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.NewInstance(CdmApplicationController.java:148)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.getApplicationController(CdmStoreConnector.java:151)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.run(CdmStoreConnector.java:99)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Constraint "_UNIQUEKEY" already exists; SQL statement:
+alter table Collection add constraint _UniqueKey unique (uuid) [90045-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.command.ddl.AlterTableAddConstraint.tryUpdate(AlterTableAddConstraint.java:89)
+ at org.h2.command.ddl.AlterTableAddConstraint.update(AlterTableAddConstraint.java:68)
+ at org.h2.command.CommandContainer.update(CommandContainer.java:75)
+ at org.h2.command.Command.executeUpdate(Command.java:230)
+ at org.h2.jdbc.JdbcStatement.executeUpdateInternal(JdbcStatement.java:125)
+ at org.h2.jdbc.JdbcStatement.executeUpdate(JdbcStatement.java:110)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.hibernate.tool.hbm2ddl.DatabaseExporter.export(DatabaseExporter.java:64)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.perform(SchemaExport.java:418)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.execute(SchemaExport.java:375)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:304)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:293)
+ at org.hibernate.internal.SessionFactoryImpl.<init>(SessionFactoryImpl.java:498)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1743)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1781)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBuilder.buildSessionFactory(LocalSessionFactoryBuilder.java:247)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.buildSessionFactory(LocalSessionFactoryBean.java:373)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.afterPropertiesSet(LocalSessionFactoryBean.java:358)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1547)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1485)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:524)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:323)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:107)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1393)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1134)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:522)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:626)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.preInstantiateSingletons(MonitoredListableBeanFactory.java:71)
+ at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:932)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.finishBeanFactoryInitialization(MonitoredGenericApplicationContext.java:74)
+ at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:479)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.refresh(MonitoredGenericApplicationContext.java:102)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.setNewDataSource(CdmApplicationController.java:264)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.<init>(CdmApplicationController.java:204)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.NewInstance(CdmApplicationController.java:148)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.getApplicationController(CdmStoreConnector.java:151)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.run(CdmStoreConnector.java:99)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Constraint "_UNIQUEKEY" already exists; SQL statement:
+alter table Credit add constraint _UniqueKey unique (uuid) [90045-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.command.ddl.AlterTableAddConstraint.tryUpdate(AlterTableAddConstraint.java:89)
+ at org.h2.command.ddl.AlterTableAddConstraint.update(AlterTableAddConstraint.java:68)
+ at org.h2.command.CommandContainer.update(CommandContainer.java:75)
+ at org.h2.command.Command.executeUpdate(Command.java:230)
+ at org.h2.jdbc.JdbcStatement.executeUpdateInternal(JdbcStatement.java:125)
+ at org.h2.jdbc.JdbcStatement.executeUpdate(JdbcStatement.java:110)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.hibernate.tool.hbm2ddl.DatabaseExporter.export(DatabaseExporter.java:64)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.perform(SchemaExport.java:418)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.execute(SchemaExport.java:375)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:304)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:293)
+ at org.hibernate.internal.SessionFactoryImpl.<init>(SessionFactoryImpl.java:498)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1743)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1781)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBuilder.buildSessionFactory(LocalSessionFactoryBuilder.java:247)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.buildSessionFactory(LocalSessionFactoryBean.java:373)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.afterPropertiesSet(LocalSessionFactoryBean.java:358)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1547)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1485)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:524)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:323)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:107)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1393)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1134)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:522)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:626)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.preInstantiateSingletons(MonitoredListableBeanFactory.java:71)
+ at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:932)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.finishBeanFactoryInitialization(MonitoredGenericApplicationContext.java:74)
+ at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:479)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.refresh(MonitoredGenericApplicationContext.java:102)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.setNewDataSource(CdmApplicationController.java:264)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.<init>(CdmApplicationController.java:204)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.NewInstance(CdmApplicationController.java:148)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.getApplicationController(CdmStoreConnector.java:151)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.run(CdmStoreConnector.java:99)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Constraint "_UNIQUEKEY" already exists; SQL statement:
+alter table DefinedTermBase add constraint _UniqueKey unique (uuid) [90045-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.command.ddl.AlterTableAddConstraint.tryUpdate(AlterTableAddConstraint.java:89)
+ at org.h2.command.ddl.AlterTableAddConstraint.update(AlterTableAddConstraint.java:68)
+ at org.h2.command.CommandContainer.update(CommandContainer.java:75)
+ at org.h2.command.Command.executeUpdate(Command.java:230)
+ at org.h2.jdbc.JdbcStatement.executeUpdateInternal(JdbcStatement.java:125)
+ at org.h2.jdbc.JdbcStatement.executeUpdate(JdbcStatement.java:110)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.hibernate.tool.hbm2ddl.DatabaseExporter.export(DatabaseExporter.java:64)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.perform(SchemaExport.java:418)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.execute(SchemaExport.java:375)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:304)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:293)
+ at org.hibernate.internal.SessionFactoryImpl.<init>(SessionFactoryImpl.java:498)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1743)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1781)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBuilder.buildSessionFactory(LocalSessionFactoryBuilder.java:247)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.buildSessionFactory(LocalSessionFactoryBean.java:373)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.afterPropertiesSet(LocalSessionFactoryBean.java:358)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1547)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1485)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:524)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:323)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:107)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1393)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1134)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:522)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:626)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.preInstantiateSingletons(MonitoredListableBeanFactory.java:71)
+ at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:932)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.finishBeanFactoryInitialization(MonitoredGenericApplicationContext.java:74)
+ at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:479)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.refresh(MonitoredGenericApplicationContext.java:102)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.setNewDataSource(CdmApplicationController.java:264)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.<init>(CdmApplicationController.java:204)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.NewInstance(CdmApplicationController.java:148)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.getApplicationController(CdmStoreConnector.java:151)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.run(CdmStoreConnector.java:99)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Constraint "_UNIQUEKEY" already exists; SQL statement:
+alter table DerivationEvent add constraint _UniqueKey unique (uuid) [90045-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.command.ddl.AlterTableAddConstraint.tryUpdate(AlterTableAddConstraint.java:89)
+ at org.h2.command.ddl.AlterTableAddConstraint.update(AlterTableAddConstraint.java:68)
+ at org.h2.command.CommandContainer.update(CommandContainer.java:75)
+ at org.h2.command.Command.executeUpdate(Command.java:230)
+ at org.h2.jdbc.JdbcStatement.executeUpdateInternal(JdbcStatement.java:125)
+ at org.h2.jdbc.JdbcStatement.executeUpdate(JdbcStatement.java:110)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.hibernate.tool.hbm2ddl.DatabaseExporter.export(DatabaseExporter.java:64)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.perform(SchemaExport.java:418)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.execute(SchemaExport.java:375)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:304)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:293)
+ at org.hibernate.internal.SessionFactoryImpl.<init>(SessionFactoryImpl.java:498)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1743)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1781)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBuilder.buildSessionFactory(LocalSessionFactoryBuilder.java:247)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.buildSessionFactory(LocalSessionFactoryBean.java:373)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.afterPropertiesSet(LocalSessionFactoryBean.java:358)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1547)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1485)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:524)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:323)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:107)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1393)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1134)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:522)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:626)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.preInstantiateSingletons(MonitoredListableBeanFactory.java:71)
+ at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:932)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.finishBeanFactoryInitialization(MonitoredGenericApplicationContext.java:74)
+ at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:479)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.refresh(MonitoredGenericApplicationContext.java:102)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.setNewDataSource(CdmApplicationController.java:264)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.<init>(CdmApplicationController.java:204)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.NewInstance(CdmApplicationController.java:148)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.getApplicationController(CdmStoreConnector.java:151)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.run(CdmStoreConnector.java:99)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Constraint "_UNIQUEKEY" already exists; SQL statement:
+alter table DescriptionBase add constraint _UniqueKey unique (uuid) [90045-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.command.ddl.AlterTableAddConstraint.tryUpdate(AlterTableAddConstraint.java:89)
+ at org.h2.command.ddl.AlterTableAddConstraint.update(AlterTableAddConstraint.java:68)
+ at org.h2.command.CommandContainer.update(CommandContainer.java:75)
+ at org.h2.command.Command.executeUpdate(Command.java:230)
+ at org.h2.jdbc.JdbcStatement.executeUpdateInternal(JdbcStatement.java:125)
+ at org.h2.jdbc.JdbcStatement.executeUpdate(JdbcStatement.java:110)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.hibernate.tool.hbm2ddl.DatabaseExporter.export(DatabaseExporter.java:64)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.perform(SchemaExport.java:418)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.execute(SchemaExport.java:375)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:304)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:293)
+ at org.hibernate.internal.SessionFactoryImpl.<init>(SessionFactoryImpl.java:498)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1743)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1781)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBuilder.buildSessionFactory(LocalSessionFactoryBuilder.java:247)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.buildSessionFactory(LocalSessionFactoryBean.java:373)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.afterPropertiesSet(LocalSessionFactoryBean.java:358)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1547)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1485)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:524)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:323)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:107)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1393)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1134)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:522)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:626)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.preInstantiateSingletons(MonitoredListableBeanFactory.java:71)
+ at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:932)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.finishBeanFactoryInitialization(MonitoredGenericApplicationContext.java:74)
+ at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:479)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.refresh(MonitoredGenericApplicationContext.java:102)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.setNewDataSource(CdmApplicationController.java:264)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.<init>(CdmApplicationController.java:204)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.NewInstance(CdmApplicationController.java:148)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.getApplicationController(CdmStoreConnector.java:151)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.run(CdmStoreConnector.java:99)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Constraint "_UNIQUEKEY" already exists; SQL statement:
+alter table DescriptionElementBase add constraint _UniqueKey unique (uuid) [90045-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.command.ddl.AlterTableAddConstraint.tryUpdate(AlterTableAddConstraint.java:89)
+ at org.h2.command.ddl.AlterTableAddConstraint.update(AlterTableAddConstraint.java:68)
+ at org.h2.command.CommandContainer.update(CommandContainer.java:75)
+ at org.h2.command.Command.executeUpdate(Command.java:230)
+ at org.h2.jdbc.JdbcStatement.executeUpdateInternal(JdbcStatement.java:125)
+ at org.h2.jdbc.JdbcStatement.executeUpdate(JdbcStatement.java:110)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.hibernate.tool.hbm2ddl.DatabaseExporter.export(DatabaseExporter.java:64)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.perform(SchemaExport.java:418)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.execute(SchemaExport.java:375)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:304)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:293)
+ at org.hibernate.internal.SessionFactoryImpl.<init>(SessionFactoryImpl.java:498)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1743)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1781)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBuilder.buildSessionFactory(LocalSessionFactoryBuilder.java:247)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.buildSessionFactory(LocalSessionFactoryBean.java:373)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.afterPropertiesSet(LocalSessionFactoryBean.java:358)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1547)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1485)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:524)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:323)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:107)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1393)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1134)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:522)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:626)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.preInstantiateSingletons(MonitoredListableBeanFactory.java:71)
+ at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:932)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.finishBeanFactoryInitialization(MonitoredGenericApplicationContext.java:74)
+ at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:479)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.refresh(MonitoredGenericApplicationContext.java:102)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.setNewDataSource(CdmApplicationController.java:264)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.<init>(CdmApplicationController.java:204)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.NewInstance(CdmApplicationController.java:148)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.getApplicationController(CdmStoreConnector.java:151)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.run(CdmStoreConnector.java:99)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Constraint "_UNIQUEKEY" already exists; SQL statement:
+alter table DeterminationEvent add constraint _UniqueKey unique (uuid) [90045-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.command.ddl.AlterTableAddConstraint.tryUpdate(AlterTableAddConstraint.java:89)
+ at org.h2.command.ddl.AlterTableAddConstraint.update(AlterTableAddConstraint.java:68)
+ at org.h2.command.CommandContainer.update(CommandContainer.java:75)
+ at org.h2.command.Command.executeUpdate(Command.java:230)
+ at org.h2.jdbc.JdbcStatement.executeUpdateInternal(JdbcStatement.java:125)
+ at org.h2.jdbc.JdbcStatement.executeUpdate(JdbcStatement.java:110)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.hibernate.tool.hbm2ddl.DatabaseExporter.export(DatabaseExporter.java:64)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.perform(SchemaExport.java:418)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.execute(SchemaExport.java:375)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:304)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:293)
+ at org.hibernate.internal.SessionFactoryImpl.<init>(SessionFactoryImpl.java:498)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1743)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1781)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBuilder.buildSessionFactory(LocalSessionFactoryBuilder.java:247)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.buildSessionFactory(LocalSessionFactoryBean.java:373)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.afterPropertiesSet(LocalSessionFactoryBean.java:358)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1547)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1485)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:524)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:323)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:107)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1393)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1134)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:522)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:626)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.preInstantiateSingletons(MonitoredListableBeanFactory.java:71)
+ at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:932)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.finishBeanFactoryInitialization(MonitoredGenericApplicationContext.java:74)
+ at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:479)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.refresh(MonitoredGenericApplicationContext.java:102)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.setNewDataSource(CdmApplicationController.java:264)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.<init>(CdmApplicationController.java:204)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.NewInstance(CdmApplicationController.java:148)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.getApplicationController(CdmStoreConnector.java:151)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.run(CdmStoreConnector.java:99)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Constraint "_UNIQUEKEY" already exists; SQL statement:
+alter table DnaQuality add constraint _UniqueKey unique (uuid) [90045-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.command.ddl.AlterTableAddConstraint.tryUpdate(AlterTableAddConstraint.java:89)
+ at org.h2.command.ddl.AlterTableAddConstraint.update(AlterTableAddConstraint.java:68)
+ at org.h2.command.CommandContainer.update(CommandContainer.java:75)
+ at org.h2.command.Command.executeUpdate(Command.java:230)
+ at org.h2.jdbc.JdbcStatement.executeUpdateInternal(JdbcStatement.java:125)
+ at org.h2.jdbc.JdbcStatement.executeUpdate(JdbcStatement.java:110)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.hibernate.tool.hbm2ddl.DatabaseExporter.export(DatabaseExporter.java:64)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.perform(SchemaExport.java:418)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.execute(SchemaExport.java:375)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:304)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:293)
+ at org.hibernate.internal.SessionFactoryImpl.<init>(SessionFactoryImpl.java:498)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1743)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1781)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBuilder.buildSessionFactory(LocalSessionFactoryBuilder.java:247)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.buildSessionFactory(LocalSessionFactoryBean.java:373)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.afterPropertiesSet(LocalSessionFactoryBean.java:358)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1547)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1485)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:524)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:323)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:107)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1393)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1134)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:522)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:626)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.preInstantiateSingletons(MonitoredListableBeanFactory.java:71)
+ at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:932)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.finishBeanFactoryInitialization(MonitoredGenericApplicationContext.java:74)
+ at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:479)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.refresh(MonitoredGenericApplicationContext.java:102)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.setNewDataSource(CdmApplicationController.java:264)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.<init>(CdmApplicationController.java:204)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.NewInstance(CdmApplicationController.java:148)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.getApplicationController(CdmStoreConnector.java:151)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.run(CdmStoreConnector.java:99)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Constraint "_UNIQUEKEY" already exists; SQL statement:
+alter table EntityConstraintViolation add constraint _UniqueKey unique (uuid) [90045-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.command.ddl.AlterTableAddConstraint.tryUpdate(AlterTableAddConstraint.java:89)
+ at org.h2.command.ddl.AlterTableAddConstraint.update(AlterTableAddConstraint.java:68)
+ at org.h2.command.CommandContainer.update(CommandContainer.java:75)
+ at org.h2.command.Command.executeUpdate(Command.java:230)
+ at org.h2.jdbc.JdbcStatement.executeUpdateInternal(JdbcStatement.java:125)
+ at org.h2.jdbc.JdbcStatement.executeUpdate(JdbcStatement.java:110)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.hibernate.tool.hbm2ddl.DatabaseExporter.export(DatabaseExporter.java:64)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.perform(SchemaExport.java:418)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.execute(SchemaExport.java:375)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:304)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:293)
+ at org.hibernate.internal.SessionFactoryImpl.<init>(SessionFactoryImpl.java:498)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1743)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1781)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBuilder.buildSessionFactory(LocalSessionFactoryBuilder.java:247)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.buildSessionFactory(LocalSessionFactoryBean.java:373)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.afterPropertiesSet(LocalSessionFactoryBean.java:358)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1547)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1485)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:524)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:323)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:107)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1393)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1134)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:522)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:626)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.preInstantiateSingletons(MonitoredListableBeanFactory.java:71)
+ at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:932)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.finishBeanFactoryInitialization(MonitoredGenericApplicationContext.java:74)
+ at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:479)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.refresh(MonitoredGenericApplicationContext.java:102)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.setNewDataSource(CdmApplicationController.java:264)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.<init>(CdmApplicationController.java:204)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.NewInstance(CdmApplicationController.java:148)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.getApplicationController(CdmStoreConnector.java:151)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.run(CdmStoreConnector.java:99)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Constraint "_UNIQUEKEY" already exists; SQL statement:
+alter table EntityValidation add constraint _UniqueKey unique (uuid) [90045-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.command.ddl.AlterTableAddConstraint.tryUpdate(AlterTableAddConstraint.java:89)
+ at org.h2.command.ddl.AlterTableAddConstraint.update(AlterTableAddConstraint.java:68)
+ at org.h2.command.CommandContainer.update(CommandContainer.java:75)
+ at org.h2.command.Command.executeUpdate(Command.java:230)
+ at org.h2.jdbc.JdbcStatement.executeUpdateInternal(JdbcStatement.java:125)
+ at org.h2.jdbc.JdbcStatement.executeUpdate(JdbcStatement.java:110)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.hibernate.tool.hbm2ddl.DatabaseExporter.export(DatabaseExporter.java:64)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.perform(SchemaExport.java:418)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.execute(SchemaExport.java:375)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:304)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:293)
+ at org.hibernate.internal.SessionFactoryImpl.<init>(SessionFactoryImpl.java:498)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1743)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1781)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBuilder.buildSessionFactory(LocalSessionFactoryBuilder.java:247)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.buildSessionFactory(LocalSessionFactoryBean.java:373)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.afterPropertiesSet(LocalSessionFactoryBean.java:358)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1547)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1485)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:524)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:323)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:107)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1393)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1134)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:522)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:626)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.preInstantiateSingletons(MonitoredListableBeanFactory.java:71)
+ at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:932)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.finishBeanFactoryInitialization(MonitoredGenericApplicationContext.java:74)
+ at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:479)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.refresh(MonitoredGenericApplicationContext.java:102)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.setNewDataSource(CdmApplicationController.java:264)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.<init>(CdmApplicationController.java:204)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.NewInstance(CdmApplicationController.java:148)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.getApplicationController(CdmStoreConnector.java:151)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.run(CdmStoreConnector.java:99)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Constraint "_UNIQUEKEY" already exists; SQL statement:
+alter table Extension add constraint _UniqueKey unique (uuid) [90045-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.command.ddl.AlterTableAddConstraint.tryUpdate(AlterTableAddConstraint.java:89)
+ at org.h2.command.ddl.AlterTableAddConstraint.update(AlterTableAddConstraint.java:68)
+ at org.h2.command.CommandContainer.update(CommandContainer.java:75)
+ at org.h2.command.Command.executeUpdate(Command.java:230)
+ at org.h2.jdbc.JdbcStatement.executeUpdateInternal(JdbcStatement.java:125)
+ at org.h2.jdbc.JdbcStatement.executeUpdate(JdbcStatement.java:110)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.hibernate.tool.hbm2ddl.DatabaseExporter.export(DatabaseExporter.java:64)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.perform(SchemaExport.java:418)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.execute(SchemaExport.java:375)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:304)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:293)
+ at org.hibernate.internal.SessionFactoryImpl.<init>(SessionFactoryImpl.java:498)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1743)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1781)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBuilder.buildSessionFactory(LocalSessionFactoryBuilder.java:247)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.buildSessionFactory(LocalSessionFactoryBean.java:373)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.afterPropertiesSet(LocalSessionFactoryBean.java:358)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1547)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1485)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:524)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:323)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:107)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1393)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1134)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:522)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:626)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.preInstantiateSingletons(MonitoredListableBeanFactory.java:71)
+ at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:932)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.finishBeanFactoryInitialization(MonitoredGenericApplicationContext.java:74)
+ at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:479)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.refresh(MonitoredGenericApplicationContext.java:102)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.setNewDataSource(CdmApplicationController.java:264)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.<init>(CdmApplicationController.java:204)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.NewInstance(CdmApplicationController.java:148)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.getApplicationController(CdmStoreConnector.java:151)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.run(CdmStoreConnector.java:99)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Constraint "_UNIQUEKEY" already exists; SQL statement:
+alter table FeatureNode add constraint _UniqueKey unique (uuid) [90045-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.command.ddl.AlterTableAddConstraint.tryUpdate(AlterTableAddConstraint.java:89)
+ at org.h2.command.ddl.AlterTableAddConstraint.update(AlterTableAddConstraint.java:68)
+ at org.h2.command.CommandContainer.update(CommandContainer.java:75)
+ at org.h2.command.Command.executeUpdate(Command.java:230)
+ at org.h2.jdbc.JdbcStatement.executeUpdateInternal(JdbcStatement.java:125)
+ at org.h2.jdbc.JdbcStatement.executeUpdate(JdbcStatement.java:110)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.hibernate.tool.hbm2ddl.DatabaseExporter.export(DatabaseExporter.java:64)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.perform(SchemaExport.java:418)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.execute(SchemaExport.java:375)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:304)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:293)
+ at org.hibernate.internal.SessionFactoryImpl.<init>(SessionFactoryImpl.java:498)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1743)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1781)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBuilder.buildSessionFactory(LocalSessionFactoryBuilder.java:247)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.buildSessionFactory(LocalSessionFactoryBean.java:373)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.afterPropertiesSet(LocalSessionFactoryBean.java:358)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1547)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1485)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:524)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:323)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:107)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1393)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1134)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:522)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:626)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.preInstantiateSingletons(MonitoredListableBeanFactory.java:71)
+ at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:932)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.finishBeanFactoryInitialization(MonitoredGenericApplicationContext.java:74)
+ at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:479)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.refresh(MonitoredGenericApplicationContext.java:102)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.setNewDataSource(CdmApplicationController.java:264)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.<init>(CdmApplicationController.java:204)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.NewInstance(CdmApplicationController.java:148)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.getApplicationController(CdmStoreConnector.java:151)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.run(CdmStoreConnector.java:99)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+06-15 17:38:36 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Constraint "_UNIQUEKEY" already exists; SQL statement:
+alter table FeatureTree add constraint _UniqueKey unique (uuid) [90045-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.command.ddl.AlterTableAddConstraint.tryUpdate(AlterTableAddConstraint.java:89)
+ at org.h2.command.ddl.AlterTableAddConstraint.update(AlterTableAddConstraint.java:68)
+ at org.h2.command.CommandContainer.update(CommandContainer.java:75)
+ at org.h2.command.Command.executeUpdate(Command.java:230)
+ at org.h2.jdbc.JdbcStatement.executeUpdateInternal(JdbcStatement.java:125)
+ at org.h2.jdbc.JdbcStatement.executeUpdate(JdbcStatement.java:110)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.hibernate.tool.hbm2ddl.DatabaseExporter.export(DatabaseExporter.java:64)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.perform(SchemaExport.java:418)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.execute(SchemaExport.java:375)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:304)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:293)
+ at org.hibernate.internal.SessionFactoryImpl.<init>(SessionFactoryImpl.java:498)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1743)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1781)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBuilder.buildSessionFactory(LocalSessionFactoryBuilder.java:247)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.buildSessionFactory(LocalSessionFactoryBean.java:373)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.afterPropertiesSet(LocalSessionFactoryBean.java:358)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1547)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1485)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:524)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:323)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:107)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1393)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1134)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:522)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:626)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.preInstantiateSingletons(MonitoredListableBeanFactory.java:71)
+ at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:932)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.finishBeanFactoryInitialization(MonitoredGenericApplicationContext.java:74)
+ at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:479)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.refresh(MonitoredGenericApplicationContext.java:102)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.setNewDataSource(CdmApplicationController.java:264)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.<init>(CdmApplicationController.java:204)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.NewInstance(CdmApplicationController.java:148)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.getApplicationController(CdmStoreConnector.java:151)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.run(CdmStoreConnector.java:99)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+06-15 17:38:37 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Constraint "_UNIQUEKEY" already exists; SQL statement:
+alter table GatheringEvent add constraint _UniqueKey unique (uuid) [90045-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.command.ddl.AlterTableAddConstraint.tryUpdate(AlterTableAddConstraint.java:89)
+ at org.h2.command.ddl.AlterTableAddConstraint.update(AlterTableAddConstraint.java:68)
+ at org.h2.command.CommandContainer.update(CommandContainer.java:75)
+ at org.h2.command.Command.executeUpdate(Command.java:230)
+ at org.h2.jdbc.JdbcStatement.executeUpdateInternal(JdbcStatement.java:125)
+ at org.h2.jdbc.JdbcStatement.executeUpdate(JdbcStatement.java:110)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.hibernate.tool.hbm2ddl.DatabaseExporter.export(DatabaseExporter.java:64)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.perform(SchemaExport.java:418)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.execute(SchemaExport.java:375)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:304)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:293)
+ at org.hibernate.internal.SessionFactoryImpl.<init>(SessionFactoryImpl.java:498)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1743)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1781)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBuilder.buildSessionFactory(LocalSessionFactoryBuilder.java:247)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.buildSessionFactory(LocalSessionFactoryBean.java:373)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.afterPropertiesSet(LocalSessionFactoryBean.java:358)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1547)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1485)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:524)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:323)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:107)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1393)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1134)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:522)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:626)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.preInstantiateSingletons(MonitoredListableBeanFactory.java:71)
+ at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:932)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.finishBeanFactoryInitialization(MonitoredGenericApplicationContext.java:74)
+ at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:479)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.refresh(MonitoredGenericApplicationContext.java:102)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.setNewDataSource(CdmApplicationController.java:264)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.<init>(CdmApplicationController.java:204)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.NewInstance(CdmApplicationController.java:148)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.getApplicationController(CdmStoreConnector.java:151)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.run(CdmStoreConnector.java:99)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+06-15 17:38:37 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Constraint "_UNIQUEKEY" already exists; SQL statement:
+alter table GrantedAuthorityImpl add constraint _UniqueKey unique (uuid) [90045-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.command.ddl.AlterTableAddConstraint.tryUpdate(AlterTableAddConstraint.java:89)
+ at org.h2.command.ddl.AlterTableAddConstraint.update(AlterTableAddConstraint.java:68)
+ at org.h2.command.CommandContainer.update(CommandContainer.java:75)
+ at org.h2.command.Command.executeUpdate(Command.java:230)
+ at org.h2.jdbc.JdbcStatement.executeUpdateInternal(JdbcStatement.java:125)
+ at org.h2.jdbc.JdbcStatement.executeUpdate(JdbcStatement.java:110)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.hibernate.tool.hbm2ddl.DatabaseExporter.export(DatabaseExporter.java:64)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.perform(SchemaExport.java:418)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.execute(SchemaExport.java:375)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:304)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:293)
+ at org.hibernate.internal.SessionFactoryImpl.<init>(SessionFactoryImpl.java:498)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1743)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1781)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBuilder.buildSessionFactory(LocalSessionFactoryBuilder.java:247)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.buildSessionFactory(LocalSessionFactoryBean.java:373)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.afterPropertiesSet(LocalSessionFactoryBean.java:358)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1547)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1485)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:524)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:323)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:107)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1393)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1134)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:522)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:626)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.preInstantiateSingletons(MonitoredListableBeanFactory.java:71)
+ at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:932)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.finishBeanFactoryInitialization(MonitoredGenericApplicationContext.java:74)
+ at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:479)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.refresh(MonitoredGenericApplicationContext.java:102)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.setNewDataSource(CdmApplicationController.java:264)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.<init>(CdmApplicationController.java:204)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.NewInstance(CdmApplicationController.java:148)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.getApplicationController(CdmStoreConnector.java:151)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.run(CdmStoreConnector.java:99)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+06-15 17:38:37 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Constraint "_UNIQUEKEY" already exists; SQL statement:
+alter table HomotypicalGroup add constraint _UniqueKey unique (uuid) [90045-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.command.ddl.AlterTableAddConstraint.tryUpdate(AlterTableAddConstraint.java:89)
+ at org.h2.command.ddl.AlterTableAddConstraint.update(AlterTableAddConstraint.java:68)
+ at org.h2.command.CommandContainer.update(CommandContainer.java:75)
+ at org.h2.command.Command.executeUpdate(Command.java:230)
+ at org.h2.jdbc.JdbcStatement.executeUpdateInternal(JdbcStatement.java:125)
+ at org.h2.jdbc.JdbcStatement.executeUpdate(JdbcStatement.java:110)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.hibernate.tool.hbm2ddl.DatabaseExporter.export(DatabaseExporter.java:64)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.perform(SchemaExport.java:418)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.execute(SchemaExport.java:375)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:304)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:293)
+ at org.hibernate.internal.SessionFactoryImpl.<init>(SessionFactoryImpl.java:498)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1743)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1781)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBuilder.buildSessionFactory(LocalSessionFactoryBuilder.java:247)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.buildSessionFactory(LocalSessionFactoryBean.java:373)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.afterPropertiesSet(LocalSessionFactoryBean.java:358)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1547)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1485)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:524)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:323)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:107)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1393)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1134)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:522)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:626)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.preInstantiateSingletons(MonitoredListableBeanFactory.java:71)
+ at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:932)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.finishBeanFactoryInitialization(MonitoredGenericApplicationContext.java:74)
+ at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:479)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.refresh(MonitoredGenericApplicationContext.java:102)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.setNewDataSource(CdmApplicationController.java:264)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.<init>(CdmApplicationController.java:204)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.NewInstance(CdmApplicationController.java:148)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.getApplicationController(CdmStoreConnector.java:151)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.run(CdmStoreConnector.java:99)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+06-15 17:38:37 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Constraint "_UNIQUEKEY" already exists; SQL statement:
+alter table HybridRelationship add constraint _UniqueKey unique (uuid) [90045-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.command.ddl.AlterTableAddConstraint.tryUpdate(AlterTableAddConstraint.java:89)
+ at org.h2.command.ddl.AlterTableAddConstraint.update(AlterTableAddConstraint.java:68)
+ at org.h2.command.CommandContainer.update(CommandContainer.java:75)
+ at org.h2.command.Command.executeUpdate(Command.java:230)
+ at org.h2.jdbc.JdbcStatement.executeUpdateInternal(JdbcStatement.java:125)
+ at org.h2.jdbc.JdbcStatement.executeUpdate(JdbcStatement.java:110)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.hibernate.tool.hbm2ddl.DatabaseExporter.export(DatabaseExporter.java:64)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.perform(SchemaExport.java:418)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.execute(SchemaExport.java:375)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:304)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:293)
+ at org.hibernate.internal.SessionFactoryImpl.<init>(SessionFactoryImpl.java:498)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1743)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1781)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBuilder.buildSessionFactory(LocalSessionFactoryBuilder.java:247)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.buildSessionFactory(LocalSessionFactoryBean.java:373)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.afterPropertiesSet(LocalSessionFactoryBean.java:358)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1547)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1485)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:524)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:323)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:107)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1393)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1134)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:522)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:626)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.preInstantiateSingletons(MonitoredListableBeanFactory.java:71)
+ at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:932)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.finishBeanFactoryInitialization(MonitoredGenericApplicationContext.java:74)
+ at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:479)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.refresh(MonitoredGenericApplicationContext.java:102)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.setNewDataSource(CdmApplicationController.java:264)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.<init>(CdmApplicationController.java:204)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.NewInstance(CdmApplicationController.java:148)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.getApplicationController(CdmStoreConnector.java:151)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.run(CdmStoreConnector.java:99)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+06-15 17:38:37 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Constraint "_UNIQUEKEY" already exists; SQL statement:
+alter table Identifier add constraint _UniqueKey unique (uuid) [90045-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.command.ddl.AlterTableAddConstraint.tryUpdate(AlterTableAddConstraint.java:89)
+ at org.h2.command.ddl.AlterTableAddConstraint.update(AlterTableAddConstraint.java:68)
+ at org.h2.command.CommandContainer.update(CommandContainer.java:75)
+ at org.h2.command.Command.executeUpdate(Command.java:230)
+ at org.h2.jdbc.JdbcStatement.executeUpdateInternal(JdbcStatement.java:125)
+ at org.h2.jdbc.JdbcStatement.executeUpdate(JdbcStatement.java:110)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.hibernate.tool.hbm2ddl.DatabaseExporter.export(DatabaseExporter.java:64)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.perform(SchemaExport.java:418)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.execute(SchemaExport.java:375)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:304)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:293)
+ at org.hibernate.internal.SessionFactoryImpl.<init>(SessionFactoryImpl.java:498)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1743)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1781)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBuilder.buildSessionFactory(LocalSessionFactoryBuilder.java:247)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.buildSessionFactory(LocalSessionFactoryBean.java:373)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.afterPropertiesSet(LocalSessionFactoryBean.java:358)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1547)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1485)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:524)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:323)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:107)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1393)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1134)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:522)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:626)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.preInstantiateSingletons(MonitoredListableBeanFactory.java:71)
+ at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:932)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.finishBeanFactoryInitialization(MonitoredGenericApplicationContext.java:74)
+ at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:479)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.refresh(MonitoredGenericApplicationContext.java:102)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.setNewDataSource(CdmApplicationController.java:264)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.<init>(CdmApplicationController.java:204)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.NewInstance(CdmApplicationController.java:148)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.getApplicationController(CdmStoreConnector.java:151)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.run(CdmStoreConnector.java:99)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+06-15 17:38:37 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Constraint "_UNIQUEKEY" already exists; SQL statement:
+alter table InstitutionalMembership add constraint _UniqueKey unique (uuid) [90045-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.command.ddl.AlterTableAddConstraint.tryUpdate(AlterTableAddConstraint.java:89)
+ at org.h2.command.ddl.AlterTableAddConstraint.update(AlterTableAddConstraint.java:68)
+ at org.h2.command.CommandContainer.update(CommandContainer.java:75)
+ at org.h2.command.Command.executeUpdate(Command.java:230)
+ at org.h2.jdbc.JdbcStatement.executeUpdateInternal(JdbcStatement.java:125)
+ at org.h2.jdbc.JdbcStatement.executeUpdate(JdbcStatement.java:110)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.hibernate.tool.hbm2ddl.DatabaseExporter.export(DatabaseExporter.java:64)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.perform(SchemaExport.java:418)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.execute(SchemaExport.java:375)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:304)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:293)
+ at org.hibernate.internal.SessionFactoryImpl.<init>(SessionFactoryImpl.java:498)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1743)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1781)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBuilder.buildSessionFactory(LocalSessionFactoryBuilder.java:247)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.buildSessionFactory(LocalSessionFactoryBean.java:373)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.afterPropertiesSet(LocalSessionFactoryBean.java:358)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1547)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1485)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:524)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:323)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:107)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1393)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1134)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:522)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:626)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.preInstantiateSingletons(MonitoredListableBeanFactory.java:71)
+ at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:932)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.finishBeanFactoryInitialization(MonitoredGenericApplicationContext.java:74)
+ at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:479)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.refresh(MonitoredGenericApplicationContext.java:102)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.setNewDataSource(CdmApplicationController.java:264)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.<init>(CdmApplicationController.java:204)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.NewInstance(CdmApplicationController.java:148)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.getApplicationController(CdmStoreConnector.java:151)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.run(CdmStoreConnector.java:99)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+06-15 17:38:37 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Constraint "_UNIQUEKEY" already exists; SQL statement:
+alter table IntextReference add constraint _UniqueKey unique (uuid) [90045-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.command.ddl.AlterTableAddConstraint.tryUpdate(AlterTableAddConstraint.java:89)
+ at org.h2.command.ddl.AlterTableAddConstraint.update(AlterTableAddConstraint.java:68)
+ at org.h2.command.CommandContainer.update(CommandContainer.java:75)
+ at org.h2.command.Command.executeUpdate(Command.java:230)
+ at org.h2.jdbc.JdbcStatement.executeUpdateInternal(JdbcStatement.java:125)
+ at org.h2.jdbc.JdbcStatement.executeUpdate(JdbcStatement.java:110)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.hibernate.tool.hbm2ddl.DatabaseExporter.export(DatabaseExporter.java:64)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.perform(SchemaExport.java:418)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.execute(SchemaExport.java:375)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:304)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:293)
+ at org.hibernate.internal.SessionFactoryImpl.<init>(SessionFactoryImpl.java:498)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1743)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1781)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBuilder.buildSessionFactory(LocalSessionFactoryBuilder.java:247)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.buildSessionFactory(LocalSessionFactoryBean.java:373)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.afterPropertiesSet(LocalSessionFactoryBean.java:358)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1547)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1485)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:524)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:323)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:107)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1393)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1134)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:522)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:626)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.preInstantiateSingletons(MonitoredListableBeanFactory.java:71)
+ at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:932)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.finishBeanFactoryInitialization(MonitoredGenericApplicationContext.java:74)
+ at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:479)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.refresh(MonitoredGenericApplicationContext.java:102)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.setNewDataSource(CdmApplicationController.java:264)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.<init>(CdmApplicationController.java:204)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.NewInstance(CdmApplicationController.java:148)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.getApplicationController(CdmStoreConnector.java:151)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.run(CdmStoreConnector.java:99)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+06-15 17:38:37 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Constraint "_UNIQUEKEY" already exists; SQL statement:
+alter table KeyStatement add constraint _UniqueKey unique (uuid) [90045-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.command.ddl.AlterTableAddConstraint.tryUpdate(AlterTableAddConstraint.java:89)
+ at org.h2.command.ddl.AlterTableAddConstraint.update(AlterTableAddConstraint.java:68)
+ at org.h2.command.CommandContainer.update(CommandContainer.java:75)
+ at org.h2.command.Command.executeUpdate(Command.java:230)
+ at org.h2.jdbc.JdbcStatement.executeUpdateInternal(JdbcStatement.java:125)
+ at org.h2.jdbc.JdbcStatement.executeUpdate(JdbcStatement.java:110)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.hibernate.tool.hbm2ddl.DatabaseExporter.export(DatabaseExporter.java:64)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.perform(SchemaExport.java:418)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.execute(SchemaExport.java:375)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:304)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:293)
+ at org.hibernate.internal.SessionFactoryImpl.<init>(SessionFactoryImpl.java:498)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1743)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1781)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBuilder.buildSessionFactory(LocalSessionFactoryBuilder.java:247)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.buildSessionFactory(LocalSessionFactoryBean.java:373)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.afterPropertiesSet(LocalSessionFactoryBean.java:358)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1547)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1485)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:524)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:323)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:107)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1393)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1134)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:522)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:626)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.preInstantiateSingletons(MonitoredListableBeanFactory.java:71)
+ at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:932)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.finishBeanFactoryInitialization(MonitoredGenericApplicationContext.java:74)
+ at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:479)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.refresh(MonitoredGenericApplicationContext.java:102)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.setNewDataSource(CdmApplicationController.java:264)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.<init>(CdmApplicationController.java:204)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.NewInstance(CdmApplicationController.java:148)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.getApplicationController(CdmStoreConnector.java:151)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.run(CdmStoreConnector.java:99)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+06-15 17:38:37 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Constraint "_UNIQUEKEY" already exists; SQL statement:
+alter table LSIDAuthority add constraint _UniqueKey unique (uuid, authority) [90045-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.command.ddl.AlterTableAddConstraint.tryUpdate(AlterTableAddConstraint.java:89)
+ at org.h2.command.ddl.AlterTableAddConstraint.update(AlterTableAddConstraint.java:68)
+ at org.h2.command.CommandContainer.update(CommandContainer.java:75)
+ at org.h2.command.Command.executeUpdate(Command.java:230)
+ at org.h2.jdbc.JdbcStatement.executeUpdateInternal(JdbcStatement.java:125)
+ at org.h2.jdbc.JdbcStatement.executeUpdate(JdbcStatement.java:110)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.hibernate.tool.hbm2ddl.DatabaseExporter.export(DatabaseExporter.java:64)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.perform(SchemaExport.java:418)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.execute(SchemaExport.java:375)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:304)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:293)
+ at org.hibernate.internal.SessionFactoryImpl.<init>(SessionFactoryImpl.java:498)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1743)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1781)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBuilder.buildSessionFactory(LocalSessionFactoryBuilder.java:247)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.buildSessionFactory(LocalSessionFactoryBean.java:373)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.afterPropertiesSet(LocalSessionFactoryBean.java:358)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1547)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1485)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:524)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:323)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:107)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1393)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1134)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:522)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:626)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.preInstantiateSingletons(MonitoredListableBeanFactory.java:71)
+ at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:932)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.finishBeanFactoryInitialization(MonitoredGenericApplicationContext.java:74)
+ at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:479)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.refresh(MonitoredGenericApplicationContext.java:102)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.setNewDataSource(CdmApplicationController.java:264)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.<init>(CdmApplicationController.java:204)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.NewInstance(CdmApplicationController.java:148)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.getApplicationController(CdmStoreConnector.java:151)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.run(CdmStoreConnector.java:99)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+06-15 17:38:37 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Constraint "_UNIQUEKEY" already exists; SQL statement:
+alter table LanguageString add constraint _UniqueKey unique (uuid) [90045-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.command.ddl.AlterTableAddConstraint.tryUpdate(AlterTableAddConstraint.java:89)
+ at org.h2.command.ddl.AlterTableAddConstraint.update(AlterTableAddConstraint.java:68)
+ at org.h2.command.CommandContainer.update(CommandContainer.java:75)
+ at org.h2.command.Command.executeUpdate(Command.java:230)
+ at org.h2.jdbc.JdbcStatement.executeUpdateInternal(JdbcStatement.java:125)
+ at org.h2.jdbc.JdbcStatement.executeUpdate(JdbcStatement.java:110)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.hibernate.tool.hbm2ddl.DatabaseExporter.export(DatabaseExporter.java:64)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.perform(SchemaExport.java:418)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.execute(SchemaExport.java:375)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:304)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:293)
+ at org.hibernate.internal.SessionFactoryImpl.<init>(SessionFactoryImpl.java:498)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1743)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1781)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBuilder.buildSessionFactory(LocalSessionFactoryBuilder.java:247)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.buildSessionFactory(LocalSessionFactoryBean.java:373)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.afterPropertiesSet(LocalSessionFactoryBean.java:358)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1547)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1485)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:524)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:323)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:107)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1393)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1134)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:522)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:626)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.preInstantiateSingletons(MonitoredListableBeanFactory.java:71)
+ at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:932)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.finishBeanFactoryInitialization(MonitoredGenericApplicationContext.java:74)
+ at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:479)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.refresh(MonitoredGenericApplicationContext.java:102)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.setNewDataSource(CdmApplicationController.java:264)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.<init>(CdmApplicationController.java:204)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.NewInstance(CdmApplicationController.java:148)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.getApplicationController(CdmStoreConnector.java:151)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.run(CdmStoreConnector.java:99)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+06-15 17:38:37 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Constraint "_UNIQUEKEY" already exists; SQL statement:
+alter table Marker add constraint _UniqueKey unique (uuid) [90045-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.command.ddl.AlterTableAddConstraint.tryUpdate(AlterTableAddConstraint.java:89)
+ at org.h2.command.ddl.AlterTableAddConstraint.update(AlterTableAddConstraint.java:68)
+ at org.h2.command.CommandContainer.update(CommandContainer.java:75)
+ at org.h2.command.Command.executeUpdate(Command.java:230)
+ at org.h2.jdbc.JdbcStatement.executeUpdateInternal(JdbcStatement.java:125)
+ at org.h2.jdbc.JdbcStatement.executeUpdate(JdbcStatement.java:110)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.hibernate.tool.hbm2ddl.DatabaseExporter.export(DatabaseExporter.java:64)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.perform(SchemaExport.java:418)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.execute(SchemaExport.java:375)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:304)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:293)
+ at org.hibernate.internal.SessionFactoryImpl.<init>(SessionFactoryImpl.java:498)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1743)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1781)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBuilder.buildSessionFactory(LocalSessionFactoryBuilder.java:247)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.buildSessionFactory(LocalSessionFactoryBean.java:373)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.afterPropertiesSet(LocalSessionFactoryBean.java:358)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1547)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1485)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:524)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:323)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:107)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1393)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1134)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:522)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:626)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.preInstantiateSingletons(MonitoredListableBeanFactory.java:71)
+ at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:932)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.finishBeanFactoryInitialization(MonitoredGenericApplicationContext.java:74)
+ at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:479)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.refresh(MonitoredGenericApplicationContext.java:102)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.setNewDataSource(CdmApplicationController.java:264)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.<init>(CdmApplicationController.java:204)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.NewInstance(CdmApplicationController.java:148)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.getApplicationController(CdmStoreConnector.java:151)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.run(CdmStoreConnector.java:99)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+06-15 17:38:37 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Constraint "_UNIQUEKEY" already exists; SQL statement:
+alter table MaterialOrMethodEvent add constraint _UniqueKey unique (uuid) [90045-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.command.ddl.AlterTableAddConstraint.tryUpdate(AlterTableAddConstraint.java:89)
+ at org.h2.command.ddl.AlterTableAddConstraint.update(AlterTableAddConstraint.java:68)
+ at org.h2.command.CommandContainer.update(CommandContainer.java:75)
+ at org.h2.command.Command.executeUpdate(Command.java:230)
+ at org.h2.jdbc.JdbcStatement.executeUpdateInternal(JdbcStatement.java:125)
+ at org.h2.jdbc.JdbcStatement.executeUpdate(JdbcStatement.java:110)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.hibernate.tool.hbm2ddl.DatabaseExporter.export(DatabaseExporter.java:64)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.perform(SchemaExport.java:418)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.execute(SchemaExport.java:375)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:304)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:293)
+ at org.hibernate.internal.SessionFactoryImpl.<init>(SessionFactoryImpl.java:498)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1743)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1781)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBuilder.buildSessionFactory(LocalSessionFactoryBuilder.java:247)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.buildSessionFactory(LocalSessionFactoryBean.java:373)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.afterPropertiesSet(LocalSessionFactoryBean.java:358)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1547)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1485)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:524)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:323)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:107)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1393)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1134)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:522)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:626)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.preInstantiateSingletons(MonitoredListableBeanFactory.java:71)
+ at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:932)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.finishBeanFactoryInitialization(MonitoredGenericApplicationContext.java:74)
+ at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:479)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.refresh(MonitoredGenericApplicationContext.java:102)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.setNewDataSource(CdmApplicationController.java:264)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.<init>(CdmApplicationController.java:204)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.NewInstance(CdmApplicationController.java:148)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.getApplicationController(CdmStoreConnector.java:151)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.run(CdmStoreConnector.java:99)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+06-15 17:38:37 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Constraint "_UNIQUEKEY" already exists; SQL statement:
+alter table Media add constraint _UniqueKey unique (uuid) [90045-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.command.ddl.AlterTableAddConstraint.tryUpdate(AlterTableAddConstraint.java:89)
+ at org.h2.command.ddl.AlterTableAddConstraint.update(AlterTableAddConstraint.java:68)
+ at org.h2.command.CommandContainer.update(CommandContainer.java:75)
+ at org.h2.command.Command.executeUpdate(Command.java:230)
+ at org.h2.jdbc.JdbcStatement.executeUpdateInternal(JdbcStatement.java:125)
+ at org.h2.jdbc.JdbcStatement.executeUpdate(JdbcStatement.java:110)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.hibernate.tool.hbm2ddl.DatabaseExporter.export(DatabaseExporter.java:64)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.perform(SchemaExport.java:418)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.execute(SchemaExport.java:375)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:304)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:293)
+ at org.hibernate.internal.SessionFactoryImpl.<init>(SessionFactoryImpl.java:498)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1743)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1781)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBuilder.buildSessionFactory(LocalSessionFactoryBuilder.java:247)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.buildSessionFactory(LocalSessionFactoryBean.java:373)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.afterPropertiesSet(LocalSessionFactoryBean.java:358)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1547)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1485)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:524)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:323)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:107)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1393)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1134)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:522)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:626)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.preInstantiateSingletons(MonitoredListableBeanFactory.java:71)
+ at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:932)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.finishBeanFactoryInitialization(MonitoredGenericApplicationContext.java:74)
+ at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:479)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.refresh(MonitoredGenericApplicationContext.java:102)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.setNewDataSource(CdmApplicationController.java:264)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.<init>(CdmApplicationController.java:204)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.NewInstance(CdmApplicationController.java:148)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.getApplicationController(CdmStoreConnector.java:151)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.run(CdmStoreConnector.java:99)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+06-15 17:38:37 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Constraint "_UNIQUEKEY" already exists; SQL statement:
+alter table MediaRepresentation add constraint _UniqueKey unique (uuid) [90045-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.command.ddl.AlterTableAddConstraint.tryUpdate(AlterTableAddConstraint.java:89)
+ at org.h2.command.ddl.AlterTableAddConstraint.update(AlterTableAddConstraint.java:68)
+ at org.h2.command.CommandContainer.update(CommandContainer.java:75)
+ at org.h2.command.Command.executeUpdate(Command.java:230)
+ at org.h2.jdbc.JdbcStatement.executeUpdateInternal(JdbcStatement.java:125)
+ at org.h2.jdbc.JdbcStatement.executeUpdate(JdbcStatement.java:110)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.hibernate.tool.hbm2ddl.DatabaseExporter.export(DatabaseExporter.java:64)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.perform(SchemaExport.java:418)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.execute(SchemaExport.java:375)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:304)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:293)
+ at org.hibernate.internal.SessionFactoryImpl.<init>(SessionFactoryImpl.java:498)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1743)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1781)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBuilder.buildSessionFactory(LocalSessionFactoryBuilder.java:247)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.buildSessionFactory(LocalSessionFactoryBean.java:373)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.afterPropertiesSet(LocalSessionFactoryBean.java:358)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1547)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1485)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:524)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:323)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:107)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1393)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1134)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:522)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:626)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.preInstantiateSingletons(MonitoredListableBeanFactory.java:71)
+ at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:932)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.finishBeanFactoryInitialization(MonitoredGenericApplicationContext.java:74)
+ at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:479)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.refresh(MonitoredGenericApplicationContext.java:102)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.setNewDataSource(CdmApplicationController.java:264)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.<init>(CdmApplicationController.java:204)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.NewInstance(CdmApplicationController.java:148)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.getApplicationController(CdmStoreConnector.java:151)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.run(CdmStoreConnector.java:99)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+06-15 17:38:37 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Constraint "_UNIQUEKEY" already exists; SQL statement:
+alter table MediaRepresentationPart add constraint _UniqueKey unique (uuid) [90045-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.command.ddl.AlterTableAddConstraint.tryUpdate(AlterTableAddConstraint.java:89)
+ at org.h2.command.ddl.AlterTableAddConstraint.update(AlterTableAddConstraint.java:68)
+ at org.h2.command.CommandContainer.update(CommandContainer.java:75)
+ at org.h2.command.Command.executeUpdate(Command.java:230)
+ at org.h2.jdbc.JdbcStatement.executeUpdateInternal(JdbcStatement.java:125)
+ at org.h2.jdbc.JdbcStatement.executeUpdate(JdbcStatement.java:110)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.hibernate.tool.hbm2ddl.DatabaseExporter.export(DatabaseExporter.java:64)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.perform(SchemaExport.java:418)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.execute(SchemaExport.java:375)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:304)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:293)
+ at org.hibernate.internal.SessionFactoryImpl.<init>(SessionFactoryImpl.java:498)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1743)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1781)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBuilder.buildSessionFactory(LocalSessionFactoryBuilder.java:247)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.buildSessionFactory(LocalSessionFactoryBean.java:373)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.afterPropertiesSet(LocalSessionFactoryBean.java:358)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1547)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1485)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:524)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:323)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:107)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1393)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1134)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:522)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:626)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.preInstantiateSingletons(MonitoredListableBeanFactory.java:71)
+ at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:932)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.finishBeanFactoryInitialization(MonitoredGenericApplicationContext.java:74)
+ at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:479)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.refresh(MonitoredGenericApplicationContext.java:102)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.setNewDataSource(CdmApplicationController.java:264)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.<init>(CdmApplicationController.java:204)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.NewInstance(CdmApplicationController.java:148)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.getApplicationController(CdmStoreConnector.java:151)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.run(CdmStoreConnector.java:99)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+06-15 17:38:37 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Constraint "_UNIQUEKEY" already exists; SQL statement:
+alter table NameRelationship add constraint _UniqueKey unique (uuid) [90045-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.command.ddl.AlterTableAddConstraint.tryUpdate(AlterTableAddConstraint.java:89)
+ at org.h2.command.ddl.AlterTableAddConstraint.update(AlterTableAddConstraint.java:68)
+ at org.h2.command.CommandContainer.update(CommandContainer.java:75)
+ at org.h2.command.Command.executeUpdate(Command.java:230)
+ at org.h2.jdbc.JdbcStatement.executeUpdateInternal(JdbcStatement.java:125)
+ at org.h2.jdbc.JdbcStatement.executeUpdate(JdbcStatement.java:110)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.hibernate.tool.hbm2ddl.DatabaseExporter.export(DatabaseExporter.java:64)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.perform(SchemaExport.java:418)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.execute(SchemaExport.java:375)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:304)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:293)
+ at org.hibernate.internal.SessionFactoryImpl.<init>(SessionFactoryImpl.java:498)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1743)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1781)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBuilder.buildSessionFactory(LocalSessionFactoryBuilder.java:247)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.buildSessionFactory(LocalSessionFactoryBean.java:373)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.afterPropertiesSet(LocalSessionFactoryBean.java:358)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1547)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1485)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:524)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:323)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:107)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1393)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1134)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:522)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:626)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.preInstantiateSingletons(MonitoredListableBeanFactory.java:71)
+ at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:932)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.finishBeanFactoryInitialization(MonitoredGenericApplicationContext.java:74)
+ at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:479)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.refresh(MonitoredGenericApplicationContext.java:102)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.setNewDataSource(CdmApplicationController.java:264)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.<init>(CdmApplicationController.java:204)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.NewInstance(CdmApplicationController.java:148)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.getApplicationController(CdmStoreConnector.java:151)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.run(CdmStoreConnector.java:99)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+06-15 17:38:37 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Constraint "_UNIQUEKEY" already exists; SQL statement:
+alter table NomenclaturalStatus add constraint _UniqueKey unique (uuid) [90045-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.command.ddl.AlterTableAddConstraint.tryUpdate(AlterTableAddConstraint.java:89)
+ at org.h2.command.ddl.AlterTableAddConstraint.update(AlterTableAddConstraint.java:68)
+ at org.h2.command.CommandContainer.update(CommandContainer.java:75)
+ at org.h2.command.Command.executeUpdate(Command.java:230)
+ at org.h2.jdbc.JdbcStatement.executeUpdateInternal(JdbcStatement.java:125)
+ at org.h2.jdbc.JdbcStatement.executeUpdate(JdbcStatement.java:110)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.hibernate.tool.hbm2ddl.DatabaseExporter.export(DatabaseExporter.java:64)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.perform(SchemaExport.java:418)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.execute(SchemaExport.java:375)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:304)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:293)
+ at org.hibernate.internal.SessionFactoryImpl.<init>(SessionFactoryImpl.java:498)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1743)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1781)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBuilder.buildSessionFactory(LocalSessionFactoryBuilder.java:247)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.buildSessionFactory(LocalSessionFactoryBean.java:373)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.afterPropertiesSet(LocalSessionFactoryBean.java:358)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1547)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1485)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:524)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:323)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:107)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1393)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1134)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:522)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:626)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.preInstantiateSingletons(MonitoredListableBeanFactory.java:71)
+ at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:932)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.finishBeanFactoryInitialization(MonitoredGenericApplicationContext.java:74)
+ at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:479)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.refresh(MonitoredGenericApplicationContext.java:102)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.setNewDataSource(CdmApplicationController.java:264)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.<init>(CdmApplicationController.java:204)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.NewInstance(CdmApplicationController.java:148)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.getApplicationController(CdmStoreConnector.java:151)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.run(CdmStoreConnector.java:99)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+06-15 17:38:37 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Constraint "_UNIQUEKEY" already exists; SQL statement:
+alter table OriginalSourceBase add constraint _UniqueKey unique (uuid) [90045-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.command.ddl.AlterTableAddConstraint.tryUpdate(AlterTableAddConstraint.java:89)
+ at org.h2.command.ddl.AlterTableAddConstraint.update(AlterTableAddConstraint.java:68)
+ at org.h2.command.CommandContainer.update(CommandContainer.java:75)
+ at org.h2.command.Command.executeUpdate(Command.java:230)
+ at org.h2.jdbc.JdbcStatement.executeUpdateInternal(JdbcStatement.java:125)
+ at org.h2.jdbc.JdbcStatement.executeUpdate(JdbcStatement.java:110)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.hibernate.tool.hbm2ddl.DatabaseExporter.export(DatabaseExporter.java:64)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.perform(SchemaExport.java:418)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.execute(SchemaExport.java:375)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:304)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:293)
+ at org.hibernate.internal.SessionFactoryImpl.<init>(SessionFactoryImpl.java:498)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1743)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1781)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBuilder.buildSessionFactory(LocalSessionFactoryBuilder.java:247)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.buildSessionFactory(LocalSessionFactoryBean.java:373)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.afterPropertiesSet(LocalSessionFactoryBean.java:358)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1547)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1485)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:524)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:323)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:107)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1393)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1134)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:522)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:626)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.preInstantiateSingletons(MonitoredListableBeanFactory.java:71)
+ at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:932)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.finishBeanFactoryInitialization(MonitoredGenericApplicationContext.java:74)
+ at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:479)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.refresh(MonitoredGenericApplicationContext.java:102)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.setNewDataSource(CdmApplicationController.java:264)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.<init>(CdmApplicationController.java:204)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.NewInstance(CdmApplicationController.java:148)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.getApplicationController(CdmStoreConnector.java:151)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.run(CdmStoreConnector.java:99)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+06-15 17:38:37 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Constraint "_UNIQUEKEY" already exists; SQL statement:
+alter table PermissionGroup add constraint _UniqueKey unique (uuid) [90045-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.command.ddl.AlterTableAddConstraint.tryUpdate(AlterTableAddConstraint.java:89)
+ at org.h2.command.ddl.AlterTableAddConstraint.update(AlterTableAddConstraint.java:68)
+ at org.h2.command.CommandContainer.update(CommandContainer.java:75)
+ at org.h2.command.Command.executeUpdate(Command.java:230)
+ at org.h2.jdbc.JdbcStatement.executeUpdateInternal(JdbcStatement.java:125)
+ at org.h2.jdbc.JdbcStatement.executeUpdate(JdbcStatement.java:110)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.hibernate.tool.hbm2ddl.DatabaseExporter.export(DatabaseExporter.java:64)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.perform(SchemaExport.java:418)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.execute(SchemaExport.java:375)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:304)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:293)
+ at org.hibernate.internal.SessionFactoryImpl.<init>(SessionFactoryImpl.java:498)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1743)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1781)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBuilder.buildSessionFactory(LocalSessionFactoryBuilder.java:247)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.buildSessionFactory(LocalSessionFactoryBean.java:373)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.afterPropertiesSet(LocalSessionFactoryBean.java:358)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1547)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1485)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:524)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:323)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:107)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1393)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1134)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:522)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:626)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.preInstantiateSingletons(MonitoredListableBeanFactory.java:71)
+ at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:932)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.finishBeanFactoryInitialization(MonitoredGenericApplicationContext.java:74)
+ at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:479)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.refresh(MonitoredGenericApplicationContext.java:102)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.setNewDataSource(CdmApplicationController.java:264)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.<init>(CdmApplicationController.java:204)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.NewInstance(CdmApplicationController.java:148)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.getApplicationController(CdmStoreConnector.java:151)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.run(CdmStoreConnector.java:99)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+06-15 17:38:37 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Constraint "_UNIQUEKEY" already exists; SQL statement:
+alter table PolytomousKey add constraint _UniqueKey unique (uuid) [90045-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.command.ddl.AlterTableAddConstraint.tryUpdate(AlterTableAddConstraint.java:89)
+ at org.h2.command.ddl.AlterTableAddConstraint.update(AlterTableAddConstraint.java:68)
+ at org.h2.command.CommandContainer.update(CommandContainer.java:75)
+ at org.h2.command.Command.executeUpdate(Command.java:230)
+ at org.h2.jdbc.JdbcStatement.executeUpdateInternal(JdbcStatement.java:125)
+ at org.h2.jdbc.JdbcStatement.executeUpdate(JdbcStatement.java:110)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.hibernate.tool.hbm2ddl.DatabaseExporter.export(DatabaseExporter.java:64)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.perform(SchemaExport.java:418)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.execute(SchemaExport.java:375)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:304)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:293)
+ at org.hibernate.internal.SessionFactoryImpl.<init>(SessionFactoryImpl.java:498)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1743)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1781)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBuilder.buildSessionFactory(LocalSessionFactoryBuilder.java:247)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.buildSessionFactory(LocalSessionFactoryBean.java:373)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.afterPropertiesSet(LocalSessionFactoryBean.java:358)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1547)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1485)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:524)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:323)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:107)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1393)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1134)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:522)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:626)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.preInstantiateSingletons(MonitoredListableBeanFactory.java:71)
+ at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:932)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.finishBeanFactoryInitialization(MonitoredGenericApplicationContext.java:74)
+ at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:479)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.refresh(MonitoredGenericApplicationContext.java:102)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.setNewDataSource(CdmApplicationController.java:264)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.<init>(CdmApplicationController.java:204)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.NewInstance(CdmApplicationController.java:148)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.getApplicationController(CdmStoreConnector.java:151)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.run(CdmStoreConnector.java:99)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+06-15 17:38:37 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Constraint "_UNIQUEKEY" already exists; SQL statement:
+alter table PolytomousKeyNode add constraint _UniqueKey unique (uuid) [90045-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.command.ddl.AlterTableAddConstraint.tryUpdate(AlterTableAddConstraint.java:89)
+ at org.h2.command.ddl.AlterTableAddConstraint.update(AlterTableAddConstraint.java:68)
+ at org.h2.command.CommandContainer.update(CommandContainer.java:75)
+ at org.h2.command.Command.executeUpdate(Command.java:230)
+ at org.h2.jdbc.JdbcStatement.executeUpdateInternal(JdbcStatement.java:125)
+ at org.h2.jdbc.JdbcStatement.executeUpdate(JdbcStatement.java:110)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.hibernate.tool.hbm2ddl.DatabaseExporter.export(DatabaseExporter.java:64)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.perform(SchemaExport.java:418)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.execute(SchemaExport.java:375)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:304)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:293)
+ at org.hibernate.internal.SessionFactoryImpl.<init>(SessionFactoryImpl.java:498)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1743)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1781)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBuilder.buildSessionFactory(LocalSessionFactoryBuilder.java:247)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.buildSessionFactory(LocalSessionFactoryBean.java:373)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.afterPropertiesSet(LocalSessionFactoryBean.java:358)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1547)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1485)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:524)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:323)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:107)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1393)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1134)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:522)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:626)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.preInstantiateSingletons(MonitoredListableBeanFactory.java:71)
+ at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:932)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.finishBeanFactoryInitialization(MonitoredGenericApplicationContext.java:74)
+ at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:479)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.refresh(MonitoredGenericApplicationContext.java:102)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.setNewDataSource(CdmApplicationController.java:264)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.<init>(CdmApplicationController.java:204)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.NewInstance(CdmApplicationController.java:148)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.getApplicationController(CdmStoreConnector.java:151)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.run(CdmStoreConnector.java:99)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+06-15 17:38:37 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Constraint "_UNIQUEKEY" already exists; SQL statement:
+alter table Primer add constraint _UniqueKey unique (uuid) [90045-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.command.ddl.AlterTableAddConstraint.tryUpdate(AlterTableAddConstraint.java:89)
+ at org.h2.command.ddl.AlterTableAddConstraint.update(AlterTableAddConstraint.java:68)
+ at org.h2.command.CommandContainer.update(CommandContainer.java:75)
+ at org.h2.command.Command.executeUpdate(Command.java:230)
+ at org.h2.jdbc.JdbcStatement.executeUpdateInternal(JdbcStatement.java:125)
+ at org.h2.jdbc.JdbcStatement.executeUpdate(JdbcStatement.java:110)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.hibernate.tool.hbm2ddl.DatabaseExporter.export(DatabaseExporter.java:64)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.perform(SchemaExport.java:418)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.execute(SchemaExport.java:375)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:304)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:293)
+ at org.hibernate.internal.SessionFactoryImpl.<init>(SessionFactoryImpl.java:498)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1743)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1781)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBuilder.buildSessionFactory(LocalSessionFactoryBuilder.java:247)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.buildSessionFactory(LocalSessionFactoryBean.java:373)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.afterPropertiesSet(LocalSessionFactoryBean.java:358)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1547)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1485)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:524)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:323)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:107)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1393)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1134)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:522)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:626)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.preInstantiateSingletons(MonitoredListableBeanFactory.java:71)
+ at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:932)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.finishBeanFactoryInitialization(MonitoredGenericApplicationContext.java:74)
+ at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:479)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.refresh(MonitoredGenericApplicationContext.java:102)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.setNewDataSource(CdmApplicationController.java:264)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.<init>(CdmApplicationController.java:204)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.NewInstance(CdmApplicationController.java:148)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.getApplicationController(CdmStoreConnector.java:151)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.run(CdmStoreConnector.java:99)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+06-15 17:38:37 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Constraint "_UNIQUEKEY" already exists; SQL statement:
+alter table Reference add constraint _UniqueKey unique (uuid) [90045-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.command.ddl.AlterTableAddConstraint.tryUpdate(AlterTableAddConstraint.java:89)
+ at org.h2.command.ddl.AlterTableAddConstraint.update(AlterTableAddConstraint.java:68)
+ at org.h2.command.CommandContainer.update(CommandContainer.java:75)
+ at org.h2.command.Command.executeUpdate(Command.java:230)
+ at org.h2.jdbc.JdbcStatement.executeUpdateInternal(JdbcStatement.java:125)
+ at org.h2.jdbc.JdbcStatement.executeUpdate(JdbcStatement.java:110)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.hibernate.tool.hbm2ddl.DatabaseExporter.export(DatabaseExporter.java:64)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.perform(SchemaExport.java:418)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.execute(SchemaExport.java:375)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:304)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:293)
+ at org.hibernate.internal.SessionFactoryImpl.<init>(SessionFactoryImpl.java:498)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1743)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1781)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBuilder.buildSessionFactory(LocalSessionFactoryBuilder.java:247)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.buildSessionFactory(LocalSessionFactoryBean.java:373)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.afterPropertiesSet(LocalSessionFactoryBean.java:358)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1547)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1485)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:524)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:323)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:107)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1393)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1134)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:522)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:626)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.preInstantiateSingletons(MonitoredListableBeanFactory.java:71)
+ at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:932)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.finishBeanFactoryInitialization(MonitoredGenericApplicationContext.java:74)
+ at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:479)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.refresh(MonitoredGenericApplicationContext.java:102)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.setNewDataSource(CdmApplicationController.java:264)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.<init>(CdmApplicationController.java:204)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.NewInstance(CdmApplicationController.java:148)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.getApplicationController(CdmStoreConnector.java:151)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.run(CdmStoreConnector.java:99)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+06-15 17:38:37 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Constraint "_UNIQUEKEY" already exists; SQL statement:
+alter table Representation add constraint _UniqueKey unique (uuid) [90045-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.command.ddl.AlterTableAddConstraint.tryUpdate(AlterTableAddConstraint.java:89)
+ at org.h2.command.ddl.AlterTableAddConstraint.update(AlterTableAddConstraint.java:68)
+ at org.h2.command.CommandContainer.update(CommandContainer.java:75)
+ at org.h2.command.Command.executeUpdate(Command.java:230)
+ at org.h2.jdbc.JdbcStatement.executeUpdateInternal(JdbcStatement.java:125)
+ at org.h2.jdbc.JdbcStatement.executeUpdate(JdbcStatement.java:110)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.hibernate.tool.hbm2ddl.DatabaseExporter.export(DatabaseExporter.java:64)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.perform(SchemaExport.java:418)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.execute(SchemaExport.java:375)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:304)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:293)
+ at org.hibernate.internal.SessionFactoryImpl.<init>(SessionFactoryImpl.java:498)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1743)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1781)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBuilder.buildSessionFactory(LocalSessionFactoryBuilder.java:247)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.buildSessionFactory(LocalSessionFactoryBean.java:373)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.afterPropertiesSet(LocalSessionFactoryBean.java:358)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1547)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1485)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:524)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:323)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:107)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1393)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1134)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:522)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:626)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.preInstantiateSingletons(MonitoredListableBeanFactory.java:71)
+ at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:932)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.finishBeanFactoryInitialization(MonitoredGenericApplicationContext.java:74)
+ at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:479)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.refresh(MonitoredGenericApplicationContext.java:102)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.setNewDataSource(CdmApplicationController.java:264)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.<init>(CdmApplicationController.java:204)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.NewInstance(CdmApplicationController.java:148)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.getApplicationController(CdmStoreConnector.java:151)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.run(CdmStoreConnector.java:99)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+06-15 17:38:37 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Constraint "_UNIQUEKEY" already exists; SQL statement:
+alter table RightsInfo add constraint _UniqueKey unique (uuid) [90045-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.command.ddl.AlterTableAddConstraint.tryUpdate(AlterTableAddConstraint.java:89)
+ at org.h2.command.ddl.AlterTableAddConstraint.update(AlterTableAddConstraint.java:68)
+ at org.h2.command.CommandContainer.update(CommandContainer.java:75)
+ at org.h2.command.Command.executeUpdate(Command.java:230)
+ at org.h2.jdbc.JdbcStatement.executeUpdateInternal(JdbcStatement.java:125)
+ at org.h2.jdbc.JdbcStatement.executeUpdate(JdbcStatement.java:110)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.hibernate.tool.hbm2ddl.DatabaseExporter.export(DatabaseExporter.java:64)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.perform(SchemaExport.java:418)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.execute(SchemaExport.java:375)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:304)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:293)
+ at org.hibernate.internal.SessionFactoryImpl.<init>(SessionFactoryImpl.java:498)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1743)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1781)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBuilder.buildSessionFactory(LocalSessionFactoryBuilder.java:247)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.buildSessionFactory(LocalSessionFactoryBean.java:373)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.afterPropertiesSet(LocalSessionFactoryBean.java:358)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1547)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1485)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:524)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:323)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:107)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1393)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1134)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:522)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:626)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.preInstantiateSingletons(MonitoredListableBeanFactory.java:71)
+ at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:932)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.finishBeanFactoryInitialization(MonitoredGenericApplicationContext.java:74)
+ at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:479)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.refresh(MonitoredGenericApplicationContext.java:102)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.setNewDataSource(CdmApplicationController.java:264)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.<init>(CdmApplicationController.java:204)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.NewInstance(CdmApplicationController.java:148)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.getApplicationController(CdmStoreConnector.java:151)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.run(CdmStoreConnector.java:99)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+06-15 17:38:37 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Constraint "_UNIQUEKEY" already exists; SQL statement:
+alter table Sequence add constraint _UniqueKey unique (uuid) [90045-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.command.ddl.AlterTableAddConstraint.tryUpdate(AlterTableAddConstraint.java:89)
+ at org.h2.command.ddl.AlterTableAddConstraint.update(AlterTableAddConstraint.java:68)
+ at org.h2.command.CommandContainer.update(CommandContainer.java:75)
+ at org.h2.command.Command.executeUpdate(Command.java:230)
+ at org.h2.jdbc.JdbcStatement.executeUpdateInternal(JdbcStatement.java:125)
+ at org.h2.jdbc.JdbcStatement.executeUpdate(JdbcStatement.java:110)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.hibernate.tool.hbm2ddl.DatabaseExporter.export(DatabaseExporter.java:64)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.perform(SchemaExport.java:418)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.execute(SchemaExport.java:375)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:304)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:293)
+ at org.hibernate.internal.SessionFactoryImpl.<init>(SessionFactoryImpl.java:498)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1743)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1781)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBuilder.buildSessionFactory(LocalSessionFactoryBuilder.java:247)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.buildSessionFactory(LocalSessionFactoryBean.java:373)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.afterPropertiesSet(LocalSessionFactoryBean.java:358)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1547)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1485)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:524)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:323)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:107)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1393)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1134)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:522)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:626)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.preInstantiateSingletons(MonitoredListableBeanFactory.java:71)
+ at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:932)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.finishBeanFactoryInitialization(MonitoredGenericApplicationContext.java:74)
+ at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:479)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.refresh(MonitoredGenericApplicationContext.java:102)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.setNewDataSource(CdmApplicationController.java:264)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.<init>(CdmApplicationController.java:204)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.NewInstance(CdmApplicationController.java:148)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.getApplicationController(CdmStoreConnector.java:151)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.run(CdmStoreConnector.java:99)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+06-15 17:38:37 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Constraint "_UNIQUEKEY" already exists; SQL statement:
+alter table SingleRead add constraint _UniqueKey unique (uuid) [90045-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.command.ddl.AlterTableAddConstraint.tryUpdate(AlterTableAddConstraint.java:89)
+ at org.h2.command.ddl.AlterTableAddConstraint.update(AlterTableAddConstraint.java:68)
+ at org.h2.command.CommandContainer.update(CommandContainer.java:75)
+ at org.h2.command.Command.executeUpdate(Command.java:230)
+ at org.h2.jdbc.JdbcStatement.executeUpdateInternal(JdbcStatement.java:125)
+ at org.h2.jdbc.JdbcStatement.executeUpdate(JdbcStatement.java:110)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.hibernate.tool.hbm2ddl.DatabaseExporter.export(DatabaseExporter.java:64)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.perform(SchemaExport.java:418)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.execute(SchemaExport.java:375)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:304)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:293)
+ at org.hibernate.internal.SessionFactoryImpl.<init>(SessionFactoryImpl.java:498)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1743)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1781)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBuilder.buildSessionFactory(LocalSessionFactoryBuilder.java:247)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.buildSessionFactory(LocalSessionFactoryBean.java:373)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.afterPropertiesSet(LocalSessionFactoryBean.java:358)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1547)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1485)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:524)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:323)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:107)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1393)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1134)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:522)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:626)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.preInstantiateSingletons(MonitoredListableBeanFactory.java:71)
+ at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:932)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.finishBeanFactoryInitialization(MonitoredGenericApplicationContext.java:74)
+ at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:479)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.refresh(MonitoredGenericApplicationContext.java:102)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.setNewDataSource(CdmApplicationController.java:264)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.<init>(CdmApplicationController.java:204)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.NewInstance(CdmApplicationController.java:148)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.getApplicationController(CdmStoreConnector.java:151)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.run(CdmStoreConnector.java:99)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+06-15 17:38:37 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Constraint "_UNIQUEKEY" already exists; SQL statement:
+alter table SingleReadAlignment add constraint _UniqueKey unique (uuid) [90045-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.command.ddl.AlterTableAddConstraint.tryUpdate(AlterTableAddConstraint.java:89)
+ at org.h2.command.ddl.AlterTableAddConstraint.update(AlterTableAddConstraint.java:68)
+ at org.h2.command.CommandContainer.update(CommandContainer.java:75)
+ at org.h2.command.Command.executeUpdate(Command.java:230)
+ at org.h2.jdbc.JdbcStatement.executeUpdateInternal(JdbcStatement.java:125)
+ at org.h2.jdbc.JdbcStatement.executeUpdate(JdbcStatement.java:110)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.hibernate.tool.hbm2ddl.DatabaseExporter.export(DatabaseExporter.java:64)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.perform(SchemaExport.java:418)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.execute(SchemaExport.java:375)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:304)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:293)
+ at org.hibernate.internal.SessionFactoryImpl.<init>(SessionFactoryImpl.java:498)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1743)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1781)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBuilder.buildSessionFactory(LocalSessionFactoryBuilder.java:247)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.buildSessionFactory(LocalSessionFactoryBean.java:373)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.afterPropertiesSet(LocalSessionFactoryBean.java:358)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1547)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1485)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:524)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:323)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:107)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1393)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1134)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:522)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:626)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.preInstantiateSingletons(MonitoredListableBeanFactory.java:71)
+ at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:932)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.finishBeanFactoryInitialization(MonitoredGenericApplicationContext.java:74)
+ at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:479)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.refresh(MonitoredGenericApplicationContext.java:102)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.setNewDataSource(CdmApplicationController.java:264)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.<init>(CdmApplicationController.java:204)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.NewInstance(CdmApplicationController.java:148)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.getApplicationController(CdmStoreConnector.java:151)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.run(CdmStoreConnector.java:99)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+06-15 17:38:37 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Constraint "_UNIQUEKEY" already exists; SQL statement:
+alter table SpecimenOrObservationBase add constraint _UniqueKey unique (uuid) [90045-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.command.ddl.AlterTableAddConstraint.tryUpdate(AlterTableAddConstraint.java:89)
+ at org.h2.command.ddl.AlterTableAddConstraint.update(AlterTableAddConstraint.java:68)
+ at org.h2.command.CommandContainer.update(CommandContainer.java:75)
+ at org.h2.command.Command.executeUpdate(Command.java:230)
+ at org.h2.jdbc.JdbcStatement.executeUpdateInternal(JdbcStatement.java:125)
+ at org.h2.jdbc.JdbcStatement.executeUpdate(JdbcStatement.java:110)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.hibernate.tool.hbm2ddl.DatabaseExporter.export(DatabaseExporter.java:64)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.perform(SchemaExport.java:418)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.execute(SchemaExport.java:375)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:304)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:293)
+ at org.hibernate.internal.SessionFactoryImpl.<init>(SessionFactoryImpl.java:498)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1743)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1781)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBuilder.buildSessionFactory(LocalSessionFactoryBuilder.java:247)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.buildSessionFactory(LocalSessionFactoryBean.java:373)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.afterPropertiesSet(LocalSessionFactoryBean.java:358)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1547)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1485)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:524)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:323)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:107)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1393)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1134)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:522)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:626)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.preInstantiateSingletons(MonitoredListableBeanFactory.java:71)
+ at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:932)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.finishBeanFactoryInitialization(MonitoredGenericApplicationContext.java:74)
+ at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:479)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.refresh(MonitoredGenericApplicationContext.java:102)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.setNewDataSource(CdmApplicationController.java:264)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.<init>(CdmApplicationController.java:204)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.NewInstance(CdmApplicationController.java:148)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.getApplicationController(CdmStoreConnector.java:151)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.run(CdmStoreConnector.java:99)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+06-15 17:38:37 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Constraint "_UNIQUEKEY" already exists; SQL statement:
+alter table StateData add constraint _UniqueKey unique (uuid) [90045-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.command.ddl.AlterTableAddConstraint.tryUpdate(AlterTableAddConstraint.java:89)
+ at org.h2.command.ddl.AlterTableAddConstraint.update(AlterTableAddConstraint.java:68)
+ at org.h2.command.CommandContainer.update(CommandContainer.java:75)
+ at org.h2.command.Command.executeUpdate(Command.java:230)
+ at org.h2.jdbc.JdbcStatement.executeUpdateInternal(JdbcStatement.java:125)
+ at org.h2.jdbc.JdbcStatement.executeUpdate(JdbcStatement.java:110)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.hibernate.tool.hbm2ddl.DatabaseExporter.export(DatabaseExporter.java:64)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.perform(SchemaExport.java:418)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.execute(SchemaExport.java:375)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:304)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:293)
+ at org.hibernate.internal.SessionFactoryImpl.<init>(SessionFactoryImpl.java:498)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1743)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1781)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBuilder.buildSessionFactory(LocalSessionFactoryBuilder.java:247)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.buildSessionFactory(LocalSessionFactoryBean.java:373)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.afterPropertiesSet(LocalSessionFactoryBean.java:358)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1547)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1485)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:524)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:323)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:107)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1393)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1134)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:522)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:626)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.preInstantiateSingletons(MonitoredListableBeanFactory.java:71)
+ at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:932)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.finishBeanFactoryInitialization(MonitoredGenericApplicationContext.java:74)
+ at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:479)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.refresh(MonitoredGenericApplicationContext.java:102)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.setNewDataSource(CdmApplicationController.java:264)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.<init>(CdmApplicationController.java:204)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.NewInstance(CdmApplicationController.java:148)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.getApplicationController(CdmStoreConnector.java:151)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.run(CdmStoreConnector.java:99)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+06-15 17:38:37 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Constraint "_UNIQUEKEY" already exists; SQL statement:
+alter table StatisticalMeasurementValue add constraint _UniqueKey unique (uuid) [90045-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.command.ddl.AlterTableAddConstraint.tryUpdate(AlterTableAddConstraint.java:89)
+ at org.h2.command.ddl.AlterTableAddConstraint.update(AlterTableAddConstraint.java:68)
+ at org.h2.command.CommandContainer.update(CommandContainer.java:75)
+ at org.h2.command.Command.executeUpdate(Command.java:230)
+ at org.h2.jdbc.JdbcStatement.executeUpdateInternal(JdbcStatement.java:125)
+ at org.h2.jdbc.JdbcStatement.executeUpdate(JdbcStatement.java:110)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.hibernate.tool.hbm2ddl.DatabaseExporter.export(DatabaseExporter.java:64)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.perform(SchemaExport.java:418)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.execute(SchemaExport.java:375)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:304)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:293)
+ at org.hibernate.internal.SessionFactoryImpl.<init>(SessionFactoryImpl.java:498)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1743)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1781)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBuilder.buildSessionFactory(LocalSessionFactoryBuilder.java:247)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.buildSessionFactory(LocalSessionFactoryBean.java:373)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.afterPropertiesSet(LocalSessionFactoryBean.java:358)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1547)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1485)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:524)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:323)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:107)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1393)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1134)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:522)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:626)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.preInstantiateSingletons(MonitoredListableBeanFactory.java:71)
+ at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:932)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.finishBeanFactoryInitialization(MonitoredGenericApplicationContext.java:74)
+ at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:479)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.refresh(MonitoredGenericApplicationContext.java:102)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.setNewDataSource(CdmApplicationController.java:264)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.<init>(CdmApplicationController.java:204)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.NewInstance(CdmApplicationController.java:148)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.getApplicationController(CdmStoreConnector.java:151)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.run(CdmStoreConnector.java:99)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+06-15 17:38:37 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Constraint "_UNIQUEKEY" already exists; SQL statement:
+alter table SynonymRelationship add constraint _UniqueKey unique (uuid) [90045-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.command.ddl.AlterTableAddConstraint.tryUpdate(AlterTableAddConstraint.java:89)
+ at org.h2.command.ddl.AlterTableAddConstraint.update(AlterTableAddConstraint.java:68)
+ at org.h2.command.CommandContainer.update(CommandContainer.java:75)
+ at org.h2.command.Command.executeUpdate(Command.java:230)
+ at org.h2.jdbc.JdbcStatement.executeUpdateInternal(JdbcStatement.java:125)
+ at org.h2.jdbc.JdbcStatement.executeUpdate(JdbcStatement.java:110)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.hibernate.tool.hbm2ddl.DatabaseExporter.export(DatabaseExporter.java:64)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.perform(SchemaExport.java:418)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.execute(SchemaExport.java:375)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:304)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:293)
+ at org.hibernate.internal.SessionFactoryImpl.<init>(SessionFactoryImpl.java:498)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1743)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1781)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBuilder.buildSessionFactory(LocalSessionFactoryBuilder.java:247)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.buildSessionFactory(LocalSessionFactoryBean.java:373)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.afterPropertiesSet(LocalSessionFactoryBean.java:358)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1547)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1485)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:524)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:323)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:107)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1393)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1134)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:522)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:626)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.preInstantiateSingletons(MonitoredListableBeanFactory.java:71)
+ at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:932)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.finishBeanFactoryInitialization(MonitoredGenericApplicationContext.java:74)
+ at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:479)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.refresh(MonitoredGenericApplicationContext.java:102)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.setNewDataSource(CdmApplicationController.java:264)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.<init>(CdmApplicationController.java:204)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.NewInstance(CdmApplicationController.java:148)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.getApplicationController(CdmStoreConnector.java:151)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.run(CdmStoreConnector.java:99)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+06-15 17:38:37 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Constraint "_UNIQUEKEY" already exists; SQL statement:
+alter table TaxonBase add constraint _UniqueKey unique (uuid) [90045-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.command.ddl.AlterTableAddConstraint.tryUpdate(AlterTableAddConstraint.java:89)
+ at org.h2.command.ddl.AlterTableAddConstraint.update(AlterTableAddConstraint.java:68)
+ at org.h2.command.CommandContainer.update(CommandContainer.java:75)
+ at org.h2.command.Command.executeUpdate(Command.java:230)
+ at org.h2.jdbc.JdbcStatement.executeUpdateInternal(JdbcStatement.java:125)
+ at org.h2.jdbc.JdbcStatement.executeUpdate(JdbcStatement.java:110)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.hibernate.tool.hbm2ddl.DatabaseExporter.export(DatabaseExporter.java:64)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.perform(SchemaExport.java:418)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.execute(SchemaExport.java:375)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:304)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:293)
+ at org.hibernate.internal.SessionFactoryImpl.<init>(SessionFactoryImpl.java:498)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1743)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1781)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBuilder.buildSessionFactory(LocalSessionFactoryBuilder.java:247)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.buildSessionFactory(LocalSessionFactoryBean.java:373)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.afterPropertiesSet(LocalSessionFactoryBean.java:358)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1547)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1485)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:524)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:323)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:107)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1393)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1134)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:522)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:626)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.preInstantiateSingletons(MonitoredListableBeanFactory.java:71)
+ at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:932)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.finishBeanFactoryInitialization(MonitoredGenericApplicationContext.java:74)
+ at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:479)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.refresh(MonitoredGenericApplicationContext.java:102)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.setNewDataSource(CdmApplicationController.java:264)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.<init>(CdmApplicationController.java:204)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.NewInstance(CdmApplicationController.java:148)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.getApplicationController(CdmStoreConnector.java:151)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.run(CdmStoreConnector.java:99)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+06-15 17:38:37 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Constraint "_UNIQUEKEY" already exists; SQL statement:
+alter table TaxonNameBase add constraint _UniqueKey unique (uuid) [90045-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.command.ddl.AlterTableAddConstraint.tryUpdate(AlterTableAddConstraint.java:89)
+ at org.h2.command.ddl.AlterTableAddConstraint.update(AlterTableAddConstraint.java:68)
+ at org.h2.command.CommandContainer.update(CommandContainer.java:75)
+ at org.h2.command.Command.executeUpdate(Command.java:230)
+ at org.h2.jdbc.JdbcStatement.executeUpdateInternal(JdbcStatement.java:125)
+ at org.h2.jdbc.JdbcStatement.executeUpdate(JdbcStatement.java:110)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.hibernate.tool.hbm2ddl.DatabaseExporter.export(DatabaseExporter.java:64)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.perform(SchemaExport.java:418)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.execute(SchemaExport.java:375)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:304)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:293)
+ at org.hibernate.internal.SessionFactoryImpl.<init>(SessionFactoryImpl.java:498)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1743)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1781)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBuilder.buildSessionFactory(LocalSessionFactoryBuilder.java:247)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.buildSessionFactory(LocalSessionFactoryBean.java:373)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.afterPropertiesSet(LocalSessionFactoryBean.java:358)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1547)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1485)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:524)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:323)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:107)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1393)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1134)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:522)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:626)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.preInstantiateSingletons(MonitoredListableBeanFactory.java:71)
+ at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:932)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.finishBeanFactoryInitialization(MonitoredGenericApplicationContext.java:74)
+ at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:479)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.refresh(MonitoredGenericApplicationContext.java:102)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.setNewDataSource(CdmApplicationController.java:264)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.<init>(CdmApplicationController.java:204)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.NewInstance(CdmApplicationController.java:148)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.getApplicationController(CdmStoreConnector.java:151)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.run(CdmStoreConnector.java:99)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+06-15 17:38:37 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Constraint "_UNIQUEKEY" already exists; SQL statement:
+alter table TaxonNode add constraint _UniqueKey unique (uuid) [90045-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.command.ddl.AlterTableAddConstraint.tryUpdate(AlterTableAddConstraint.java:89)
+ at org.h2.command.ddl.AlterTableAddConstraint.update(AlterTableAddConstraint.java:68)
+ at org.h2.command.CommandContainer.update(CommandContainer.java:75)
+ at org.h2.command.Command.executeUpdate(Command.java:230)
+ at org.h2.jdbc.JdbcStatement.executeUpdateInternal(JdbcStatement.java:125)
+ at org.h2.jdbc.JdbcStatement.executeUpdate(JdbcStatement.java:110)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.hibernate.tool.hbm2ddl.DatabaseExporter.export(DatabaseExporter.java:64)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.perform(SchemaExport.java:418)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.execute(SchemaExport.java:375)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:304)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:293)
+ at org.hibernate.internal.SessionFactoryImpl.<init>(SessionFactoryImpl.java:498)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1743)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1781)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBuilder.buildSessionFactory(LocalSessionFactoryBuilder.java:247)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.buildSessionFactory(LocalSessionFactoryBean.java:373)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.afterPropertiesSet(LocalSessionFactoryBean.java:358)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1547)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1485)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:524)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:323)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:107)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1393)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1134)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:522)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:626)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.preInstantiateSingletons(MonitoredListableBeanFactory.java:71)
+ at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:932)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.finishBeanFactoryInitialization(MonitoredGenericApplicationContext.java:74)
+ at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:479)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.refresh(MonitoredGenericApplicationContext.java:102)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.setNewDataSource(CdmApplicationController.java:264)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.<init>(CdmApplicationController.java:204)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.NewInstance(CdmApplicationController.java:148)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.getApplicationController(CdmStoreConnector.java:151)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.run(CdmStoreConnector.java:99)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+06-15 17:38:37 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Constraint "_UNIQUEKEY" already exists; SQL statement:
+alter table TaxonNodeAgentRelation add constraint _UniqueKey unique (uuid) [90045-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.command.ddl.AlterTableAddConstraint.tryUpdate(AlterTableAddConstraint.java:89)
+ at org.h2.command.ddl.AlterTableAddConstraint.update(AlterTableAddConstraint.java:68)
+ at org.h2.command.CommandContainer.update(CommandContainer.java:75)
+ at org.h2.command.Command.executeUpdate(Command.java:230)
+ at org.h2.jdbc.JdbcStatement.executeUpdateInternal(JdbcStatement.java:125)
+ at org.h2.jdbc.JdbcStatement.executeUpdate(JdbcStatement.java:110)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.hibernate.tool.hbm2ddl.DatabaseExporter.export(DatabaseExporter.java:64)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.perform(SchemaExport.java:418)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.execute(SchemaExport.java:375)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:304)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:293)
+ at org.hibernate.internal.SessionFactoryImpl.<init>(SessionFactoryImpl.java:498)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1743)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1781)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBuilder.buildSessionFactory(LocalSessionFactoryBuilder.java:247)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.buildSessionFactory(LocalSessionFactoryBean.java:373)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.afterPropertiesSet(LocalSessionFactoryBean.java:358)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1547)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1485)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:524)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:323)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:107)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1393)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1134)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:522)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:626)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.preInstantiateSingletons(MonitoredListableBeanFactory.java:71)
+ at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:932)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.finishBeanFactoryInitialization(MonitoredGenericApplicationContext.java:74)
+ at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:479)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.refresh(MonitoredGenericApplicationContext.java:102)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.setNewDataSource(CdmApplicationController.java:264)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.<init>(CdmApplicationController.java:204)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.NewInstance(CdmApplicationController.java:148)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.getApplicationController(CdmStoreConnector.java:151)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.run(CdmStoreConnector.java:99)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+06-15 17:38:37 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Constraint "_UNIQUEKEY" already exists; SQL statement:
+alter table TaxonRelationship add constraint _UniqueKey unique (uuid) [90045-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.command.ddl.AlterTableAddConstraint.tryUpdate(AlterTableAddConstraint.java:89)
+ at org.h2.command.ddl.AlterTableAddConstraint.update(AlterTableAddConstraint.java:68)
+ at org.h2.command.CommandContainer.update(CommandContainer.java:75)
+ at org.h2.command.Command.executeUpdate(Command.java:230)
+ at org.h2.jdbc.JdbcStatement.executeUpdateInternal(JdbcStatement.java:125)
+ at org.h2.jdbc.JdbcStatement.executeUpdate(JdbcStatement.java:110)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.hibernate.tool.hbm2ddl.DatabaseExporter.export(DatabaseExporter.java:64)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.perform(SchemaExport.java:418)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.execute(SchemaExport.java:375)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:304)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:293)
+ at org.hibernate.internal.SessionFactoryImpl.<init>(SessionFactoryImpl.java:498)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1743)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1781)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBuilder.buildSessionFactory(LocalSessionFactoryBuilder.java:247)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.buildSessionFactory(LocalSessionFactoryBean.java:373)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.afterPropertiesSet(LocalSessionFactoryBean.java:358)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1547)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1485)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:524)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:323)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:107)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1393)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1134)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:522)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:626)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.preInstantiateSingletons(MonitoredListableBeanFactory.java:71)
+ at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:932)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.finishBeanFactoryInitialization(MonitoredGenericApplicationContext.java:74)
+ at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:479)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.refresh(MonitoredGenericApplicationContext.java:102)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.setNewDataSource(CdmApplicationController.java:264)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.<init>(CdmApplicationController.java:204)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.NewInstance(CdmApplicationController.java:148)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.getApplicationController(CdmStoreConnector.java:151)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.run(CdmStoreConnector.java:99)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+06-15 17:38:37 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Constraint "_UNIQUEKEY" already exists; SQL statement:
+alter table TermVocabulary add constraint _UniqueKey unique (uuid) [90045-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.command.ddl.AlterTableAddConstraint.tryUpdate(AlterTableAddConstraint.java:89)
+ at org.h2.command.ddl.AlterTableAddConstraint.update(AlterTableAddConstraint.java:68)
+ at org.h2.command.CommandContainer.update(CommandContainer.java:75)
+ at org.h2.command.Command.executeUpdate(Command.java:230)
+ at org.h2.jdbc.JdbcStatement.executeUpdateInternal(JdbcStatement.java:125)
+ at org.h2.jdbc.JdbcStatement.executeUpdate(JdbcStatement.java:110)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.hibernate.tool.hbm2ddl.DatabaseExporter.export(DatabaseExporter.java:64)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.perform(SchemaExport.java:418)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.execute(SchemaExport.java:375)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:304)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:293)
+ at org.hibernate.internal.SessionFactoryImpl.<init>(SessionFactoryImpl.java:498)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1743)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1781)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBuilder.buildSessionFactory(LocalSessionFactoryBuilder.java:247)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.buildSessionFactory(LocalSessionFactoryBean.java:373)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.afterPropertiesSet(LocalSessionFactoryBean.java:358)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1547)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1485)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:524)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:323)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:107)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1393)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1134)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:522)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:626)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.preInstantiateSingletons(MonitoredListableBeanFactory.java:71)
+ at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:932)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.finishBeanFactoryInitialization(MonitoredGenericApplicationContext.java:74)
+ at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:479)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.refresh(MonitoredGenericApplicationContext.java:102)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.setNewDataSource(CdmApplicationController.java:264)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.<init>(CdmApplicationController.java:204)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.NewInstance(CdmApplicationController.java:148)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.getApplicationController(CdmStoreConnector.java:151)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.run(CdmStoreConnector.java:99)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+06-15 17:38:37 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Constraint "_UNIQUEKEY" already exists; SQL statement:
+alter table TypeDesignationBase add constraint _UniqueKey unique (uuid) [90045-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.command.ddl.AlterTableAddConstraint.tryUpdate(AlterTableAddConstraint.java:89)
+ at org.h2.command.ddl.AlterTableAddConstraint.update(AlterTableAddConstraint.java:68)
+ at org.h2.command.CommandContainer.update(CommandContainer.java:75)
+ at org.h2.command.Command.executeUpdate(Command.java:230)
+ at org.h2.jdbc.JdbcStatement.executeUpdateInternal(JdbcStatement.java:125)
+ at org.h2.jdbc.JdbcStatement.executeUpdate(JdbcStatement.java:110)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.hibernate.tool.hbm2ddl.DatabaseExporter.export(DatabaseExporter.java:64)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.perform(SchemaExport.java:418)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.execute(SchemaExport.java:375)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:304)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:293)
+ at org.hibernate.internal.SessionFactoryImpl.<init>(SessionFactoryImpl.java:498)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1743)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1781)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBuilder.buildSessionFactory(LocalSessionFactoryBuilder.java:247)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.buildSessionFactory(LocalSessionFactoryBean.java:373)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.afterPropertiesSet(LocalSessionFactoryBean.java:358)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1547)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1485)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:524)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:323)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:107)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1393)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1134)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:522)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:626)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.preInstantiateSingletons(MonitoredListableBeanFactory.java:71)
+ at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:932)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.finishBeanFactoryInitialization(MonitoredGenericApplicationContext.java:74)
+ at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:479)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.refresh(MonitoredGenericApplicationContext.java:102)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.setNewDataSource(CdmApplicationController.java:264)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.<init>(CdmApplicationController.java:204)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.NewInstance(CdmApplicationController.java:148)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.getApplicationController(CdmStoreConnector.java:151)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.run(CdmStoreConnector.java:99)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+06-15 17:38:37 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Constraint "_UNIQUEKEY" already exists; SQL statement:
+alter table UserAccount add constraint _UniqueKey unique (uuid) [90045-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.command.ddl.AlterTableAddConstraint.tryUpdate(AlterTableAddConstraint.java:89)
+ at org.h2.command.ddl.AlterTableAddConstraint.update(AlterTableAddConstraint.java:68)
+ at org.h2.command.CommandContainer.update(CommandContainer.java:75)
+ at org.h2.command.Command.executeUpdate(Command.java:230)
+ at org.h2.jdbc.JdbcStatement.executeUpdateInternal(JdbcStatement.java:125)
+ at org.h2.jdbc.JdbcStatement.executeUpdate(JdbcStatement.java:110)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.hibernate.tool.hbm2ddl.DatabaseExporter.export(DatabaseExporter.java:64)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.perform(SchemaExport.java:418)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.execute(SchemaExport.java:375)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:304)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:293)
+ at org.hibernate.internal.SessionFactoryImpl.<init>(SessionFactoryImpl.java:498)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1743)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1781)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBuilder.buildSessionFactory(LocalSessionFactoryBuilder.java:247)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.buildSessionFactory(LocalSessionFactoryBean.java:373)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.afterPropertiesSet(LocalSessionFactoryBean.java:358)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1547)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1485)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:524)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:323)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:107)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1393)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1134)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:522)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:626)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.preInstantiateSingletons(MonitoredListableBeanFactory.java:71)
+ at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:932)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.finishBeanFactoryInitialization(MonitoredGenericApplicationContext.java:74)
+ at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:479)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.refresh(MonitoredGenericApplicationContext.java:102)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.setNewDataSource(CdmApplicationController.java:264)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.<init>(CdmApplicationController.java:204)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.NewInstance(CdmApplicationController.java:148)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.getApplicationController(CdmStoreConnector.java:151)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.run(CdmStoreConnector.java:99)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
+06-15 17:38:37 jdbc[2]: exception
+org.h2.jdbc.JdbcSQLException: Constraint "_UNIQUEKEY" already exists; SQL statement:
+alter table WorkingSet add constraint _UniqueKey unique (uuid) [90045-170]
+ at org.h2.message.DbException.getJdbcSQLException(DbException.java:329)
+ at org.h2.message.DbException.get(DbException.java:169)
+ at org.h2.message.DbException.get(DbException.java:146)
+ at org.h2.command.ddl.AlterTableAddConstraint.tryUpdate(AlterTableAddConstraint.java:89)
+ at org.h2.command.ddl.AlterTableAddConstraint.update(AlterTableAddConstraint.java:68)
+ at org.h2.command.CommandContainer.update(CommandContainer.java:75)
+ at org.h2.command.Command.executeUpdate(Command.java:230)
+ at org.h2.jdbc.JdbcStatement.executeUpdateInternal(JdbcStatement.java:125)
+ at org.h2.jdbc.JdbcStatement.executeUpdate(JdbcStatement.java:110)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
+ at org.hibernate.tool.hbm2ddl.DatabaseExporter.export(DatabaseExporter.java:64)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.perform(SchemaExport.java:418)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.execute(SchemaExport.java:375)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:304)
+ at org.hibernate.tool.hbm2ddl.SchemaExport.create(SchemaExport.java:293)
+ at org.hibernate.internal.SessionFactoryImpl.<init>(SessionFactoryImpl.java:498)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1743)
+ at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1781)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBuilder.buildSessionFactory(LocalSessionFactoryBuilder.java:247)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.buildSessionFactory(LocalSessionFactoryBean.java:373)
+ at org.springframework.orm.hibernate4.LocalSessionFactoryBean.afterPropertiesSet(LocalSessionFactoryBean.java:358)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1547)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1485)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:524)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:323)
+ at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:107)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1393)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1134)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:522)
+ at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:461)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.createBean(MonitoredListableBeanFactory.java:108)
+ at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)
+ at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)
+ at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
+ at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:626)
+ at eu.etaxonomy.cdm.api.application.MonitoredListableBeanFactory.preInstantiateSingletons(MonitoredListableBeanFactory.java:71)
+ at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:932)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.finishBeanFactoryInitialization(MonitoredGenericApplicationContext.java:74)
+ at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:479)
+ at eu.etaxonomy.cdm.api.application.MonitoredGenericApplicationContext.refresh(MonitoredGenericApplicationContext.java:102)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.setNewDataSource(CdmApplicationController.java:264)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.<init>(CdmApplicationController.java:204)
+ at eu.etaxonomy.cdm.api.application.CdmApplicationController.NewInstance(CdmApplicationController.java:148)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.getApplicationController(CdmStoreConnector.java:151)
+ at eu.etaxonomy.taxeditor.store.CdmStoreConnector.run(CdmStoreConnector.java:99)
+ at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
--- /dev/null
+<?xml version="1.0"?>
+<abcd:DataSets xmlns:abcd="http://www.tdwg.org/schemas/abcd/2.06" xmlns:biocase="http://www.biocase.org/schemas/protocol/1.3" xmlns:ns1="http://www.dnabank-network.org/test" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://www.biocase.org/schemas/protocol/1.3 http://www.bgbm.org/biodivinf/schema/protocol_1_31.xsd">
+ <abcd:DataSet>
+ <abcd:DatasetGUID>www.floraweb.de/florkart/atlas/2007</abcd:DatasetGUID>
+ <abcd:TechnicalContacts>
+ <abcd:TechnicalContact>
+ <abcd:Name>Rudolf May</abcd:Name>
+ <abcd:Email>rudolf.may@bfn.de</abcd:Email>
+ <abcd:Phone>+49-228-84911441</abcd:Phone>
+ <abcd:Address>BfN, Konstantinstr. 110, D-53179 Bonn</abcd:Address>
+ </abcd:TechnicalContact>
+ </abcd:TechnicalContacts>
+ <abcd:ContentContacts>
+ <abcd:ContentContact>
+ <abcd:Name>Rudolf May</abcd:Name>
+ <abcd:Email>rudolf.may@bfn.de</abcd:Email>
+ <abcd:Phone>+49-228-84911441</abcd:Phone>
+ <abcd:Address>BfN, Konstantinstr. 110, D-53179 Bonn</abcd:Address>
+ </abcd:ContentContact>
+ </abcd:ContentContacts>
+ <abcd:Metadata>
+ <abcd:Description>
+ <abcd:Representation abcd:language="GE German Deutsch">
+ <abcd:Title>FlorKart - FlorenKartierung Gefaesspflanzen</abcd:Title>
+ <abcd:Details>Verbreitung der Farn- und Bluetenpflanzen in Deutschland, Vorkommensnachweise aggregiert auf Rasterfelder der Topographischen Karte im Massstab 1 : 25000 (TK25 = MTB), Blattschnitt 6 x 10 Minuten, sowie in Zeitperioden 'vor 1950', '1950 - 1980', '1980 - 2000'</abcd:Details>
+ <abcd:Coverage>Deutschland</abcd:Coverage>
+ <abcd:URI>http://www.floraweb.de</abcd:URI>
+ </abcd:Representation>
+ </abcd:Description>
+ <abcd:IconURI>http://www.floraweb.de/images/floraweb.gif</abcd:IconURI>
+ <abcd:Version>
+ <abcd:Major>2007</abcd:Major>
+ </abcd:Version>
+ <abcd:RevisionData>
+ <abcd:Creators>Netzwerk Phytodiversitaet Deutschlands (NetPhyD) und Bundesamt für Naturschutz (BfN)</abcd:Creators>
+ <abcd:Contributors>Alle ehrenamtlich an der Floristischen Kartierung Deutschlands beteiligten Mitarbeiter</abcd:Contributors>
+ <abcd:DateCreated>2007-01-01</abcd:DateCreated>
+ <abcd:DateModified>2010-01-01</abcd:DateModified>
+ </abcd:RevisionData>
+ <abcd:Owners>
+ <abcd:Owner>
+ <abcd:Organisation>
+ <abcd:Name>
+ <abcd:Representation abcd:language="GE German Deutsch">
+ <abcd:Text>Bundesamt für Naturschutz (BfN) und Netzwerk Phytodiversität Deutschlands (NetPhyD)</abcd:Text>
+ <abcd:Abbreviation>BfN/NetPhyD</abcd:Abbreviation>
+ </abcd:Representation>
+ </abcd:Name>
+ </abcd:Organisation>
+ <abcd:Person>
+ <abcd:FullName>Rudolf May</abcd:FullName>
+ </abcd:Person>
+ <abcd:Roles>
+ <abcd:Role>Project Manager</abcd:Role>
+ </abcd:Roles>
+ <abcd:Addresses>
+ <abcd:Address>BfN, Konstantinstr. 110, D-53179 Bonn</abcd:Address>
+ </abcd:Addresses>
+ <abcd:TelephoneNumbers>
+ <abcd:TelephoneNumber>
+ <abcd:Number>+49-228-84911441</abcd:Number>
+ <abcd:Device>voice</abcd:Device>
+ </abcd:TelephoneNumber>
+ </abcd:TelephoneNumbers>
+ <abcd:EmailAddresses>
+ <abcd:EmailAddress>floraweb@bfn.de</abcd:EmailAddress>
+ </abcd:EmailAddresses>
+ <abcd:URIs>
+ <abcd:URL>http://www.bfn.de</abcd:URL>
+ </abcd:URIs>
+ <abcd:LogoURI>http://www.bfn.de/fileadmin/global/templates/images/logo_bfn.gif</abcd:LogoURI>
+ </abcd:Owner>
+ </abcd:Owners>
+ <abcd:IPRStatements>
+ <abcd:IPRDeclarations>
+ <abcd:IPRDeclaration abcd:language="GE German Deutsch">
+ <abcd:Text>Mitarbeiter der Floristischen Kartierung Deutschlands</abcd:Text>
+ <abcd:Details>Alle amtlich und ehrenamtlich an der Floristischen Kartierung Deutschlands beteiligten Mitarbeiter</abcd:Details>
+ </abcd:IPRDeclaration>
+ </abcd:IPRDeclarations>
+ <abcd:Copyrights>
+ <abcd:Copyright abcd:language="GE German Deutsch">
+ <abcd:Text>BfN/NetPhyD</abcd:Text>
+ <abcd:Details>Bundesamt fuer Naturschutz und Netzwerk Phytodiversitaet Deutschlands</abcd:Details>
+ </abcd:Copyright>
+ </abcd:Copyrights>
+ <abcd:TermsOfUseStatements>
+ <abcd:TermsOfUse abcd:language="GE German Deutsch">
+ <abcd:Text>Bei Verwendung in Publikationen bitte die Datenquelle vollstaendig zitieren.</abcd:Text>
+ <abcd:Details>Bei Verwendung in Publikationen bitte die Datenquelle vollstaendig zitieren. Die Verwendung der Daten zu kommerziellen Zwecken wird untersagt.</abcd:Details>
+ </abcd:TermsOfUse>
+ </abcd:TermsOfUseStatements>
+ <abcd:Disclaimers>
+ <abcd:Disclaimer abcd:language="GE German Deutsch">
+ <abcd:Text>Fuer die Richtigkeit der Daten wird keine Gewaehrleistung uebernommen</abcd:Text>
+ <abcd:Details>Fuer die Richtigkeit der Daten wird keine Gewaehrleistung uebernommen</abcd:Details>
+ </abcd:Disclaimer>
+ </abcd:Disclaimers>
+ <abcd:Acknowledgements>
+ <abcd:Acknowledgement abcd:language="GE German Deutsch">
+ <abcd:Text>In Anerkennung der Leistungen der ehrenamtlichen Kartierer der Flora Deutschlands</abcd:Text>
+ <abcd:Details>Die Kompilation der Verbreitungsdaten beruht auf unentgeltlich erbrachten Kartierungsleistungen von über 2000 ehrenamtlichen Mitarbeitern der Floristischen Kartierung Deutschlands, die in zahlreichen regionalen Kartierungsprojekten organisiert sind.</abcd:Details>
+ <abcd:URI>http://www.floraweb.de/pflanzenarten/hintergrundtexte_florkart_organisation.html</abcd:URI>
+ </abcd:Acknowledgement>
+ </abcd:Acknowledgements>
+ <abcd:Citations>
+ <abcd:Citation abcd:language="GE German Deutsch">
+ <abcd:Text>Datenbank FLORKART, BfN und NetPhyD</abcd:Text>
+ <abcd:Details>Datenbank FLORKART der Floristischen Kartierung Deutschlands, Stand 2007, Bundesamt für Naturschutz (BfN) und Netzwerk Phytodiversitaet Deutschland (NetPhyD)</abcd:Details>
+ </abcd:Citation>
+ </abcd:Citations>
+ </abcd:IPRStatements>
+ </abcd:Metadata>
+ <abcd:Units>
+ <abcd:Unit>
+ <abcd:SourceInstitutionID>BfN</abcd:SourceInstitutionID>
+ <abcd:SourceID>FlorKart_BfN</abcd:SourceID>
+ <abcd:UnitID>1003121</abcd:UnitID>
+ <abcd:UnitReferences>
+ <abcd:UnitReference>
+ <abcd:TitleCitation>Datenbank FLORKART, BfN und NetPhyD</abcd:TitleCitation>
+ <abcd:CitationDetail>Datenbank FLORKART der Floristischen Kartierung Deutschlands, Stand 2007, Bundesamt für Naturschutz (BfN) und Netzwerk Phytodiversitaet Deutschland (NetPhyD)</abcd:CitationDetail>
+ </abcd:UnitReference>
+ </abcd:UnitReferences>
+ <abcd:Identifications>
+ <abcd:Identification>
+ <abcd:Result>
+ <abcd:TaxonIdentified>
+ <abcd:HigherTaxa>
+ <abcd:HigherTaxon>
+ <abcd:HigherTaxonName>Asteraceae</abcd:HigherTaxonName>
+ </abcd:HigherTaxon>
+ </abcd:HigherTaxa>
+ <abcd:ScientificName>
+ <abcd:FullScientificNameString>Cichorium calvum Asch.</abcd:FullScientificNameString>
+ <abcd:NameAtomised>
+ <abcd:Botanical>
+ <abcd:GenusOrMonomial>Cichorium</abcd:GenusOrMonomial>
+ <abcd:FirstEpithet>calvum</abcd:FirstEpithet>
+ <abcd:Rank>SPE</abcd:Rank>
+ <abcd:AuthorTeamParenthesis>Asch.</abcd:AuthorTeamParenthesis>
+ </abcd:Botanical>
+ </abcd:NameAtomised>
+ </abcd:ScientificName>
+ </abcd:TaxonIdentified>
+ </abcd:Result>
+ </abcd:Identification>
+ </abcd:Identifications>
+ <abcd:Gathering>
+ <abcd:DateTime>
+ <abcd:DateText>1950-1980</abcd:DateText>
+ <abcd:PeriodExplicit>false</abcd:PeriodExplicit>
+ </abcd:DateTime>
+ <abcd:Agents>
+ <abcd:GatheringAgentsText>Mitarbeiter der Floristischen Kartierung Deutschlands</abcd:GatheringAgentsText>
+ </abcd:Agents>
+ <abcd:LocalityText>MTB 3915: Bockhorst</abcd:LocalityText>
+ <abcd:Country>
+ <abcd:Name language="German">Deutschland</abcd:Name>
+ </abcd:Country>
+ <abcd:SiteCoordinateSets>
+ <abcd:SiteCoordinates>
+ <abcd:CoordinatesGrid>
+ <abcd:GridCellSystem>German TK25</abcd:GridCellSystem>
+ <abcd:GridCellCode>3915</abcd:GridCellCode>
+ </abcd:CoordinatesGrid>
+ <abcd:CoordinatesLatLong>
+ <abcd:LongitudeDecimal>8.25</abcd:LongitudeDecimal>
+ <abcd:LatitudeDecimal>52.06</abcd:LatitudeDecimal>
+ <abcd:AccuracyStatement>Mittelpunkte von TK25-Rasterfeldern</abcd:AccuracyStatement>
+ <abcd:CoordinateErrorDistanceInMeters>6363</abcd:CoordinateErrorDistanceInMeters>
+ </abcd:CoordinatesLatLong>
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+ </abcd:Unit>
+ <abcd:Unit>
+ <abcd:SourceInstitutionID>BfN</abcd:SourceInstitutionID>
+ <abcd:SourceID>FlorKart_BfN</abcd:SourceID>
+ <abcd:UnitID>1003130</abcd:UnitID>
+ <abcd:UnitReferences>
+ <abcd:UnitReference>
+ <abcd:TitleCitation>Datenbank FLORKART, BfN und NetPhyD</abcd:TitleCitation>
+ <abcd:CitationDetail>Datenbank FLORKART der Floristischen Kartierung Deutschlands, Stand 2007, Bundesamt für Naturschutz (BfN) und Netzwerk Phytodiversitaet Deutschland (NetPhyD)</abcd:CitationDetail>
+ </abcd:UnitReference>
+ </abcd:UnitReferences>
+ <abcd:Identifications>
+ <abcd:Identification>
+ <abcd:Result>
+ <abcd:TaxonIdentified>
+ <abcd:HigherTaxa>
+ <abcd:HigherTaxon>
+ <abcd:HigherTaxonName>Asteraceae</abcd:HigherTaxonName>
+ </abcd:HigherTaxon>
+ </abcd:HigherTaxa>
+ <abcd:ScientificName>
+ <abcd:FullScientificNameString>Cichorium calvum Asch.</abcd:FullScientificNameString>
+ <abcd:NameAtomised>
+ <abcd:Botanical>
+ <abcd:GenusOrMonomial>Cichorium</abcd:GenusOrMonomial>
+ <abcd:FirstEpithet>calvum</abcd:FirstEpithet>
+ <abcd:Rank>SPE</abcd:Rank>
+ <abcd:AuthorTeamParenthesis>Asch.</abcd:AuthorTeamParenthesis>
+ </abcd:Botanical>
+ </abcd:NameAtomised>
+ </abcd:ScientificName>
+ </abcd:TaxonIdentified>
+ </abcd:Result>
+ </abcd:Identification>
+ </abcd:Identifications>
+ <abcd:Gathering>
+ <abcd:DateTime>
+ <abcd:DateText>1950-1980</abcd:DateText>
+ <abcd:PeriodExplicit>false</abcd:PeriodExplicit>
+ </abcd:DateTime>
+ <abcd:Agents>
+ <abcd:GatheringAgentsText>Mitarbeiter der Floristischen Kartierung Deutschlands</abcd:GatheringAgentsText>
+ </abcd:Agents>
+ <abcd:LocalityText>MTB 7032: Bieswang</abcd:LocalityText>
+ <abcd:Country>
+ <abcd:Name language="German">Deutschland</abcd:Name>
+ </abcd:Country>
+ <abcd:SiteCoordinateSets>
+ <abcd:SiteCoordinates>
+ <abcd:CoordinatesGrid>
+ <abcd:GridCellSystem>German TK25</abcd:GridCellSystem>
+ <abcd:GridCellCode>7032</abcd:GridCellCode>
+ </abcd:CoordinatesGrid>
+ <abcd:CoordinatesLatLong>
+ <abcd:LongitudeDecimal>11.08</abcd:LongitudeDecimal>
+ <abcd:LatitudeDecimal>48.96</abcd:LatitudeDecimal>
+ <abcd:AccuracyStatement>Mittelpunkte von TK25-Rasterfeldern</abcd:AccuracyStatement>
+ <abcd:CoordinateErrorDistanceInMeters>6575</abcd:CoordinateErrorDistanceInMeters>
+ </abcd:CoordinatesLatLong>
+ </abcd:SiteCoordinates>
+ </abcd:SiteCoordinateSets>
+ </abcd:Gathering>
+ </abcd:Unit>
+ </abcd:Units>
+ </abcd:DataSet>
+ </abcd:DataSets>
--- /dev/null
+<?xml version="1.0" encoding="UTF-8"?>
+<Datasets xmlns="http://rs.tdwg.org/UBIF/2006/"
+ xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://rs.tdwg.org/UBIF/2006/ http://rs.tdwg.org/UBIF/2006/Schema/1.1/SDD.xsd">
+ <TechnicalMetadata created="1970-01-01T09:34:00">
+ <Generator name="Xper2"
+ notes="This software is developed and distributed by LIS - Laboratoire Informatique et SystÈmatique (LIS) - UniversitÈ Pierre et Marie Curie - Paris VI - Copyright (c) 2004-2009" version="1.1"/>
+ </TechnicalMetadata>
+ <Dataset xml:lang="fr">
+ <Representation>
+ <Label>ant base</Label>
+ </Representation>
+ <RevisionData>
+ <Creators>
+ <Agent ref="a0" role="aut"/>
+ </Creators>
+ <DateCreated>2012-06-06T09:34:58</DateCreated>
+ <DateModified>2012-06-06T09:34:58</DateModified>
+ </RevisionData>
+ <TaxonNames>
+ <TaxonName id="t1">
+ <Representation>
+ <Label>Dolichoderinae</Label>
+ </Representation>
+ </TaxonName>
+ <TaxonName id="t2">
+ <Representation>
+ <Label>Formicinae</Label>
+ </Representation>
+ </TaxonName>
+ <TaxonName id="t3">
+ <Representation>
+ <Label>Ponerinae</Label>
+ </Representation>
+ </TaxonName>
+ <TaxonName id="t4">
+ <Representation>
+ <Label>Myrmicinae</Label>
+ </Representation>
+ </TaxonName>
+ <TaxonName id="t5">
+ <Representation>
+ <Label>Pseudomyrmecinae</Label>
+ </Representation>
+ </TaxonName>
+ <TaxonName id="t6">
+ <Representation>
+ <Label>Ecitoninae</Label>
+ </Representation>
+ </TaxonName>
+ <TaxonName id="t7">
+ <Representation>
+ <Label>Ectatomminae</Label>
+ </Representation>
+ </TaxonName>
+ <TaxonName id="t8">
+ <Representation>
+ <Label>Cerapachyinae</Label>
+ </Representation>
+ </TaxonName>
+ <TaxonName id="t9">
+ <Representation>
+ <Label>Genus Ectatom</Label>
+ </Representation>
+ </TaxonName>
+ </TaxonNames>
+ <TaxonHierarchies>
+ <TaxonHierarchy id="th1">
+ <Representation>
+ <Label>Default Entity Tree</Label>
+ </Representation>
+ <TaxonHierarchyType>UnspecifiedTaxonomy</TaxonHierarchyType>
+ <Nodes>
+ <Node id="tn1">
+ <TaxonName ref="t1"/>
+ </Node>
+ <Node id="tn2">
+ <TaxonName ref="t2"/>
+ </Node>
+ <Node id="tn3">
+ <Parent ref="tn2"/>
+ <TaxonName ref="t3"/>
+ </Node>
+ <Node id="tn4">
+ <TaxonName ref="t4"/>
+ </Node>
+ <Node id="tn5">
+ <Parent ref="tn4"/>
+ <TaxonName ref="t5"/>
+ </Node>
+ <Node id="tn6">
+ <TaxonName ref="t6"/>
+ </Node>
+ <Node id="tn7">
+ <Parent ref="tn6"/>
+ <TaxonName ref="t8"/>
+ </Node>
+ </Nodes>
+ </TaxonHierarchy>
+ </TaxonHierarchies>
+ <Characters>
+ <CategoricalCharacter id="c1">
+ <Representation>
+ <Label>Pétiole</Label>
+ <Detail>Le <b>pétiole</b> se situe entre le mésosoma et l'alitrunk.</Detail>
+ <MediaObject ref="m35"/>
+ <MediaObject ref="m36"/>
+ </Representation>
+ <States>
+ <StateDefinition id="s1">
+ <Representation>
+ <Label>un seul article réduit ou isolé</Label>
+ <MediaObject ref="m37"/>
+ </Representation>
+ </StateDefinition>
+ <StateDefinition id="s2">
+ <Representation>
+ <Label>deux articles réduits ou isolés</Label>
+ <Detail>Les deux articles correspondent au<b>pétiole</b> et au <b>post-pétiole</b>.<br>Soit les deux segments sont plus ou moins réduits, soit le deuxième article est plus large que le premier, soit le postpétiole est largement plus réduit.</Detail>
+ <MediaObject ref="m38"/>
+ </Representation>
+ </StateDefinition>
+ </States>
+ </CategoricalCharacter>
+ <CategoricalCharacter id="c2">
+ <Representation>
+ <Label>Aiguillon venimeux</Label>
+ <Detail>Quand il est vestigial et non fonctionnel, on le considère comme absent.</Detail>
+ <MediaObject ref="m39"/>
+ <MediaObject ref="m40"/>
+ </Representation>
+ <States>
+ <StateDefinition id="s3">
+ <Representation>
+ <Label>absent</Label>
+ <Detail>Apex du gastre <b>sans aiguillon</b>.</Detail>
+ <MediaObject ref="m41"/>
+ </Representation>
+ </StateDefinition>
+ <StateDefinition id="s4">
+ <Representation>
+ <Label>présent</Label>
+ <Detail>C'est l'<b>apex du gastre</b> qui porte l'aiguillon.<br>Il est considéré comme présent uniquement s'il <b>est fonctionnel</b>. Certains aiguillons sont dévaginables, d'autres sont visibles de façon permanente.</Detail>
+ <MediaObject ref="m42"/>
+ <MediaObject ref="m43"/>
+ </Representation>
+ </StateDefinition>
+ </States>
+ </CategoricalCharacter>
+ <CategoricalCharacter id="c3">
+ <Representation>
+ <Label>Acidopore</Label>
+ <Detail>L'<b>acidopore</b> est l'ouverture à la base du gastre par laquelle le venin est éjecté ou vaporisé</Detail>
+ <MediaObject ref="m44"/>
+ <MediaObject ref="m45"/>
+ </Representation>
+ <States>
+ <StateDefinition id="s5">
+ <Representation>
+ <Label>circulaire et entouré de soies</Label>
+ <Detail>Quand cette structure est présente, le venin est projeté sous forme de spray. L'<b>acidopore circulaire</b> est parfois visible à l'oeil nu chez les fourmis de grande taille.</Detail>
+ <MediaObject ref="m46"/>
+ </Representation>
+ </StateDefinition>
+ <StateDefinition id="s6">
+ <Representation>
+ <Label>sous forme de fente</Label>
+ <Detail>Contrairement à l'acidopore circulaire, la <b>fente</b> est rarement visible à l'oeil nu.</Detail>
+ <MediaObject ref="m47"/>
+ </Representation>
+ </StateDefinition>
+ <StateDefinition id="s7">
+ <Representation>
+ <Label>absent ou quasi invisible</Label>
+ </Representation>
+ </StateDefinition>
+ </States>
+ </CategoricalCharacter>
+ <CategoricalCharacter id="c4">
+ <Representation>
+ <Label>Pygidium</Label>
+ <Detail>Le <b>pygidium</b> correspond au tergite à l'apex du gastre.</Detail>
+ <MediaObject ref="m48"/>
+ <MediaObject ref="m49"/>
+ </Representation>
+ <States>
+ <StateDefinition id="s8">
+ <Representation>
+ <Label>non armé</Label>
+ <Detail><b>Pygidium lisse non armé</b> latéralement ou postérieurement.</Detail>
+ </Representation>
+ </StateDefinition>
+ <StateDefinition id="s9">
+ <Representation>
+ <Label>armé</Label>
+ <Detail><b>Pygidium armé </b> latéralement, postérieurement ou les deux par une rangée de courtes épines ou dents.</Detail>
+ <MediaObject ref="m50"/>
+ </Representation>
+ </StateDefinition>
+ </States>
+ </CategoricalCharacter>
+ <CategoricalCharacter id="c5">
+ <Representation>
+ <Label>Marge clypéale</Label>
+ <MediaObject ref="m51"/>
+ <MediaObject ref="m52"/>
+ </Representation>
+ <States>
+ <StateDefinition id="s10">
+ <Representation>
+ <Label>sans projection</Label>
+ <Detail>Il s'agit de la <b>marge clypéale antérolatérale</b>.</Detail>
+ <MediaObject ref="m53"/>
+ </Representation>
+ </StateDefinition>
+ <StateDefinition id="s11">
+ <Representation>
+ <Label>avec projection</Label>
+ <MediaObject ref="m54"/>
+ </Representation>
+ </StateDefinition>
+ </States>
+ </CategoricalCharacter>
+ <CategoricalCharacter id="c6">
+ <Representation>
+ <Label>Yeux</Label>
+ <Detail>Les <b>yeux</b> des insectes sont des yeux composés d'<b>ommatidies</b>. Attention à ne pas les confondre avec les <b>ocelles</b>, yeux simples souvent situés sur le dessu-de la tête, servant à détecter les variations de luminosité.</Detail>
+ <MediaObject ref="m55"/>
+ <MediaObject ref="m56"/>
+ </Representation>
+ <States>
+ <StateDefinition id="s12">
+ <Representation>
+ <Label>absents ou très réduits</Label>
+ <Detail>Yeux absents ou très réduits c'est à dire représentés seulement par une seule ou un petit nombre d'ommatidies.</Detail>
+ </Representation>
+ </StateDefinition>
+ <StateDefinition id="s13">
+ <Representation>
+ <Label>présents et bien visibles</Label>
+ <Detail>Yeux présent et bien visibles composés d'un grand nombre d'ommatidies.</Detail>
+ <MediaObject ref="m57"/>
+ </Representation>
+ </StateDefinition>
+ </States>
+ </CategoricalCharacter>
+ <CategoricalCharacter id="c7">
+ <Representation>
+ <Label>Antennes</Label>
+ <MediaObject ref="m58"/>
+ <MediaObject ref="m59"/>
+ </Representation>
+ <States>
+ <StateDefinition id="s14">
+ <Representation>
+ <Label>de 8 à 10 segments</Label>
+ </Representation>
+ </StateDefinition>
+ <StateDefinition id="s15">
+ <Representation>
+ <Label>de 12 segments</Label>
+ </Representation>
+ </StateDefinition>
+ <StateDefinition id="s16">
+ <Representation>
+ <Label>moins de 8 segments</Label>
+ </Representation>
+ </StateDefinition>
+ <StateDefinition id="s17">
+ <Representation>
+ <Label>10 ou 11 segments</Label>
+ </Representation>
+ </StateDefinition>
+ </States>
+ </CategoricalCharacter>
+ <CategoricalCharacter id="c8">
+ <Representation>
+ <Label>Répartition mondiale</Label>
+ </Representation>
+ <States>
+ <StateDefinition id="s18">
+ <Representation>
+ <Label>monde entier</Label>
+ </Representation>
+ </StateDefinition>
+ <StateDefinition id="s19">
+ <Representation>
+ <Label>régions tempérées</Label>
+ </Representation>
+ </StateDefinition>
+ <StateDefinition id="s20">
+ <Representation>
+ <Label>tropiques</Label>
+ <Detail>Il s'agit des tropiques (voire subtropiques) du monden entier.</Detail>
+ </Representation>
+ </StateDefinition>
+ <StateDefinition id="s21">
+ <Representation>
+ <Label>néotropiques</Label>
+ <Detail>Il s'agit des zones tropicales américaines.</Detail>
+ </Representation>
+ </StateDefinition>
+ </States>
+ </CategoricalCharacter>
+ <CategoricalCharacter id="c9">
+ <Representation>
+ <Label>Lobes frontaux</Label>
+ <MediaObject ref="m60"/>
+ <MediaObject ref="m61"/>
+ </Representation>
+ <States>
+ <StateDefinition id="s22">
+ <Representation>
+ <Label>absents ou très réduits et verticaux</Label>
+ <MediaObject ref="m62"/>
+ </Representation>
+ </StateDefinition>
+ <StateDefinition id="s23">
+ <Representation>
+ <Label>présents et horizontaux</Label>
+ <MediaObject ref="m63"/>
+ </Representation>
+ </StateDefinition>
+ </States>
+ </CategoricalCharacter>
+ <CategoricalCharacter id="c10">
+ <Representation>
+ <Label>Bases antennaires</Label>
+ <MediaObject ref="m64"/>
+ <MediaObject ref="m65"/>
+ </Representation>
+ <States>
+ <StateDefinition id="s24">
+ <Representation>
+ <Label>partiellement ou complètement camouflées</Label>
+ <Detail>En vue de face, les <b>bases antennaires</b> sont partiellement ou complètement recouvertes par les <b> lobes frontaux</b> (jamais complètement exposées).</Detail>
+ <MediaObject ref="m66"/>
+ </Representation>
+ </StateDefinition>
+ <StateDefinition id="s25">
+ <Representation>
+ <Label>totalement exposées</Label>
+ <Detail>En vue de face, les <b>bases antennaires</b> sont complètement exposées et non recouvertes par les lobes frontaux.</Detail>
+ <MediaObject ref="m67"/>
+ </Representation>
+ </StateDefinition>
+ </States>
+ </CategoricalCharacter>
+ <CategoricalCharacter id="c11">
+ <Representation>
+ <Label>Suture promésonotale</Label>
+ <Detail>La <b>suture promésonotale</b> est la suture (ligne de ligne de fusion) entre le pronotum et le mesonotum, les deux premiers articles du thorax.</Detail>
+ <MediaObject ref="m68"/>
+ <MediaObject ref="m69"/>
+ <MediaObject ref="m70"/>
+ <MediaObject ref="m71"/>
+ </Representation>
+ <States>
+ <StateDefinition id="s26">
+ <Representation>
+ <Label>absente</Label>
+ <MediaObject ref="m72"/>
+ </Representation>
+ </StateDefinition>
+ <StateDefinition id="s27">
+ <Representation>
+ <Label>vestigiale</Label>
+ </Representation>
+ </StateDefinition>
+ <StateDefinition id="s28">
+ <Representation>
+ <Label>présente</Label>
+ <MediaObject ref="m73"/>
+ </Representation>
+ </StateDefinition>
+ </States>
+ </CategoricalCharacter>
+ <CategoricalCharacter id="c12">
+ <Representation>
+ <Label>Ocelle(s)</Label>
+ <Detail>Les <b>ocelles</b> sont des yeux simples servant à détecter les variations de luminosité. Les ouvrières peuvent avoir un ou plusieurs ocelles.</Detail>
+ <MediaObject ref="m74"/>
+ <MediaObject ref="m75"/>
+ </Representation>
+ <States>
+ <StateDefinition id="s29">
+ <Representation>
+ <Label>absent(s)</Label>
+ </Representation>
+ </StateDefinition>
+ <StateDefinition id="s30">
+ <Representation>
+ <Label>présent(s)</Label>
+ </Representation>
+ </StateDefinition>
+ </States>
+ </CategoricalCharacter>
+ <CategoricalCharacter id="c13">
+ <Representation>
+ <Label>Palpes maxillaires</Label>
+ <MediaObject ref="m76"/>
+ </Representation>
+ <States>
+ <StateDefinition id="s31">
+ <Representation>
+ <Label>présents et bien visibles</Label>
+ </Representation>
+ </StateDefinition>
+ <StateDefinition id="s32">
+ <Representation>
+ <Label>absents ou très difficilement visibles</Label>
+ </Representation>
+ </StateDefinition>
+ </States>
+ </CategoricalCharacter>
+ </Characters>
+ <CharacterTrees>
+ <CharacterTree id="ct1">
+ <Representation>
+ <Label>Ordre et dÈpendance entre caractËres</Label>
+ </Representation>
+ <ShouldContainAllCharacters>true</ShouldContainAllCharacters>
+ <Nodes>
+ <CharNode>
+ <Character ref="c1"/>
+ </CharNode>
+ <CharNode>
+ <Character ref="c2"/>
+ </CharNode>
+ <CharNode>
+ <DependencyRules>
+ <InapplicableIf>
+ <State ref="s2"/>
+ </InapplicableIf>
+ </DependencyRules>
+ <Character ref="c3"/>
+ </CharNode>
+ <CharNode>
+ <Character ref="c4"/>
+ </CharNode>
+ <CharNode>
+ <DependencyRules>
+ <InapplicableIf>
+ <State ref="s3"/>
+ </InapplicableIf>
+ </DependencyRules>
+ <Character ref="c5"/>
+ </CharNode>
+ <CharNode>
+ <Character ref="c6"/>
+ </CharNode>
+ <CharNode>
+ <Character ref="c7"/>
+ </CharNode>
+ <CharNode>
+ <Character ref="c8"/>
+ </CharNode>
+ <CharNode>
+ <Character ref="c9"/>
+ </CharNode>
+ <CharNode>
+ <Character ref="c10"/>
+ </CharNode>
+ <CharNode>
+ <Character ref="c11"/>
+ </CharNode>
+ <CharNode>
+ <Character ref="c12"/>
+ </CharNode>
+ <CharNode>
+ <Character ref="c13"/>
+ </CharNode>
+ </Nodes>
+ </CharacterTree>
+ </CharacterTrees>
+ <CodedDescriptions>
+ <CodedDescription id="D1">
+ <Representation>
+ <Label>Dolichoderinae</Label>
+ <MediaObject ref="m1"/>
+ <MediaObject ref="m2"/>
+ <MediaObject ref="m3"/>
+ </Representation>
+ <Scope>
+ <TaxonName ref="t1"/>
+ </Scope>
+ <SummaryData>
+ <Categorical ref="c1">
+ <State ref="s1"/>
+ </Categorical>
+ <Categorical ref="c2">
+ <Note>Leur aiguillon venimeux est vestigial et non fonctionnel.</Note>
+ <State ref="s3"/>
+ </Categorical>
+ <Categorical ref="c3">
+ <State ref="s6"/>
+ </Categorical>
+ <Categorical ref="c4">
+ <State ref="s8"/>
+ </Categorical>
+ <Categorical ref="c5"/>
+ <Categorical ref="c6">
+ <State ref="s13"/>
+ </Categorical>
+ <Categorical ref="c7">
+ <Note>Les ouvrières possèdent généralement 11 articles antennaires, rarement 10 ou 11.</Note>
+ <State ref="s14"/>
+ <State ref="s15"/>
+ </Categorical>
+ <Categorical ref="c8">
+ <State ref="s18"/>
+ </Categorical>
+ <Categorical ref="c9">
+ <Status code="DataUnavailable"/>
+ </Categorical>
+ <Categorical ref="c10">
+ <Note>Elles sont partiellement ou totalement cachées par la carèbe frontale, marge du lbe frontal.</Note>
+ <State ref="s24"/>
+ </Categorical>
+ <Categorical ref="c11">
+ <Note>Elle est présente et flexible.</Note>
+ <State ref="s28"/>
+ </Categorical>
+ <Categorical ref="c12">
+ <Note>Les ocelles sont pratiquement tout le temps absents.</Note>
+ <State ref="s29"/>
+ </Categorical>
+ <Categorical ref="c13">
+ <State ref="s31"/>
+ </Categorical>
+ </SummaryData>
+ </CodedDescription>
+ <CodedDescription id="D2">
+ <Representation>
+ <Label>Formicinae</Label>
+ <MediaObject ref="m4"/>
+ <MediaObject ref="m5"/>
+ <MediaObject ref="m6"/>
+ <MediaObject ref="m7"/>
+ <MediaObject ref="m8"/>
+ </Representation>
+ <Scope>
+ <TaxonName ref="t2"/>
+ </Scope>
+ <SummaryData>
+ <Categorical ref="c1">
+ <State ref="s1"/>
+ </Categorical>
+ <Categorical ref="c2">
+ <Note>Leur aiguillon est non fonctionnel.</Note>
+ <State ref="s3"/>
+ </Categorical>
+ <Categorical ref="c3">
+ <State ref="s5"/>
+ </Categorical>
+ <Categorical ref="c4">
+ <State ref="s8"/>
+ </Categorical>
+ <Categorical ref="c5"/>
+ <Categorical ref="c6">
+ <Note>Leurs yeux sont généralement bien développés, rarement réduits ou absents.</Note>
+ <State ref="s12"/>
+ <State ref="s13"/>
+ </Categorical>
+ <Categorical ref="c7">
+ <State ref="s14"/>
+ <State ref="s15"/>
+ <State ref="s17"/>
+ </Categorical>
+ <Categorical ref="c8">
+ <State ref="s18"/>
+ </Categorical>
+ <Categorical ref="c9">
+ <Status code="DataUnavailable"/>
+ </Categorical>
+ <Categorical ref="c10">
+ <State ref="s25"/>
+ </Categorical>
+ <Categorical ref="c11">
+ <State ref="s28"/>
+ </Categorical>
+ <Categorical ref="c12">
+ <Note>Les ocelles sont présents dans la grande majorité des genres.</Note>
+ <State ref="s30"/>
+ </Categorical>
+ <Categorical ref="c13">
+ <State ref="s31"/>
+ <State ref="s32"/>
+ </Categorical>
+ </SummaryData>
+ </CodedDescription>
+ <CodedDescription id="D3">
+ <Representation>
+ <Label>Ponerinae</Label>
+ <MediaObject ref="m9"/>
+ <MediaObject ref="m10"/>
+ <MediaObject ref="m11"/>
+ <MediaObject ref="m12"/>
+ <MediaObject ref="m13"/>
+ </Representation>
+ <Scope>
+ <TaxonName ref="t3"/>
+ </Scope>
+ <SummaryData>
+ <Categorical ref="c1">
+ <State ref="s1"/>
+ </Categorical>
+ <Categorical ref="c2">
+ <State ref="s4"/>
+ </Categorical>
+ <Categorical ref="c3">
+ <State ref="s7"/>
+ </Categorical>
+ <Categorical ref="c4">
+ <State ref="s8"/>
+ </Categorical>
+ <Categorical ref="c5">
+ <State ref="s10"/>
+ </Categorical>
+ <Categorical ref="c6">
+ <Note>Les Ponerinae possèdent des yeux bien développés dans la grande majorité des cas.</Note>
+ <State ref="s13"/>
+ </Categorical>
+ <Categorical ref="c7">
+ <Status code="DataUnavailable"/>
+ </Categorical>
+ <Categorical ref="c8">
+ <State ref="s19"/>
+ <State ref="s20"/>
+ </Categorical>
+ <Categorical ref="c9">
+ <State ref="s23"/>
+ </Categorical>
+ <Categorical ref="c10">
+ <State ref="s24"/>
+ </Categorical>
+ <Categorical ref="c11">
+ <Note>Si les yeux et les lobes frontaux sont absents, la suture promésonotale est toujours absente.</Note>
+ <State ref="s26"/>
+ <State ref="s28"/>
+ </Categorical>
+ <Categorical ref="c12">
+ <Note>En général les ouvrières de poneriane ne portent pas d'ocelles.</Note>
+ <State ref="s29"/>
+ </Categorical>
+ <Categorical ref="c13">
+ <State ref="s31"/>
+ <State ref="s32"/>
+ </Categorical>
+ </SummaryData>
+ </CodedDescription>
+ <CodedDescription id="D4">
+ <Representation>
+ <Label>Myrmicinae</Label>
+ <MediaObject ref="m14"/>
+ <MediaObject ref="m15"/>
+ <MediaObject ref="m16"/>
+ <MediaObject ref="m17"/>
+ <MediaObject ref="m18"/>
+ <MediaObject ref="m19"/>
+ <MediaObject ref="m20"/>
+ </Representation>
+ <Scope>
+ <TaxonName ref="t4"/>
+ </Scope>
+ <SummaryData>
+ <Categorical ref="c1">
+ <State ref="s2"/>
+ </Categorical>
+ <Categorical ref="c2">
+ <State ref="s4"/>
+ </Categorical>
+ <Categorical ref="c3"/>
+ <Categorical ref="c4">
+ <State ref="s8"/>
+ </Categorical>
+ <Categorical ref="c5">
+ <State ref="s10"/>
+ </Categorical>
+ <Categorical ref="c6">
+ <State ref="s13"/>
+ </Categorical>
+ <Categorical ref="c7">
+ <Note>Le nombre d'articles antennaires peut varier de 4 à 12 chez les Myrmicinae.</Note>
+ <State ref="s14"/>
+ <State ref="s15"/>
+ <State ref="s16"/>
+ </Categorical>
+ <Categorical ref="c8">
+ <State ref="s18"/>
+ </Categorical>
+ <Categorical ref="c9">
+ <State ref="s22"/>
+ <State ref="s23"/>
+ </Categorical>
+ <Categorical ref="c10">
+ <State ref="s24"/>
+ <State ref="s25"/>
+ </Categorical>
+ <Categorical ref="c11">
+ <Note>Elle est souvent complètement absente et rarement vestigiale. Quand c'est le cas, elle donne l'impression transversalement s'un arche en vue dorsale.</Note>
+ <State ref="s26"/>
+ <State ref="s27"/>
+ </Categorical>
+ <Categorical ref="c12">
+ <Note>Les ocelles sont la plupart du temps absents, très rarement présents.</Note>
+ <State ref="s29"/>
+ </Categorical>
+ <Categorical ref="c13">
+ <State ref="s31"/>
+ <State ref="s32"/>
+ </Categorical>
+ </SummaryData>
+ </CodedDescription>
+ <CodedDescription id="D5">
+ <Representation>
+ <Label>Pseudomyrmecinae</Label>
+ <MediaObject ref="m21"/>
+ <MediaObject ref="m22"/>
+ <MediaObject ref="m23"/>
+ <MediaObject ref="m24"/>
+ </Representation>
+ <Scope>
+ <TaxonName ref="t5"/>
+ </Scope>
+ <SummaryData>
+ <Categorical ref="c1">
+ <State ref="s2"/>
+ </Categorical>
+ <Categorical ref="c2">
+ <State ref="s4"/>
+ </Categorical>
+ <Categorical ref="c3"/>
+ <Categorical ref="c4">
+ <State ref="s8"/>
+ </Categorical>
+ <Categorical ref="c5">
+ <Note>La projestion clypéale concernée est postérieure c'est à dir vers les mandibules, et non vers le haut de la tête.</Note>
+ <State ref="s10"/>
+ </Categorical>
+ <Categorical ref="c6">
+ <State ref="s13"/>
+ </Categorical>
+ <Categorical ref="c7">
+ <State ref="s15"/>
+ </Categorical>
+ <Categorical ref="c8">
+ <State ref="s20"/>
+ </Categorical>
+ <Categorical ref="c9">
+ <State ref="s22"/>
+ <State ref="s23"/>
+ </Categorical>
+ <Categorical ref="c10">
+ <State ref="s24"/>
+ </Categorical>
+ <Categorical ref="c11">
+ <Note>Elle est très visible en vue dorsale.</Note>
+ <State ref="s28"/>
+ </Categorical>
+ <Categorical ref="c12">
+ <State ref="s30"/>
+ </Categorical>
+ <Categorical ref="c13">
+ <State ref="s32"/>
+ </Categorical>
+ </SummaryData>
+ </CodedDescription>
+ <CodedDescription id="D6">
+ <Representation>
+ <Label>Ecitoninae</Label>
+ <MediaObject ref="m25"/>
+ <MediaObject ref="m26"/>
+ <MediaObject ref="m27"/>
+ <MediaObject ref="m28"/>
+ </Representation>
+ <Scope>
+ <TaxonName ref="t6"/>
+ </Scope>
+ <SummaryData>
+ <Categorical ref="c1">
+ <State ref="s2"/>
+ </Categorical>
+ <Categorical ref="c2">
+ <State ref="s4"/>
+ </Categorical>
+ <Categorical ref="c3"/>
+ <Categorical ref="c4">
+ <State ref="s8"/>
+ </Categorical>
+ <Categorical ref="c5">
+ <State ref="s10"/>
+ </Categorical>
+ <Categorical ref="c6">
+ <Note>Leurs yeux sont réduits à une seule ommatidies ou absents.</Note>
+ <State ref="s12"/>
+ </Categorical>
+ <Categorical ref="c7">
+ <State ref="s15"/>
+ </Categorical>
+ <Categorical ref="c8">
+ <State ref="s19"/>
+ <State ref="s21"/>
+ </Categorical>
+ <Categorical ref="c9">
+ <State ref="s22"/>
+ </Categorical>
+ <Categorical ref="c10">
+ <State ref="s25"/>
+ </Categorical>
+ <Categorical ref="c11">
+ <Note>Cette suture n'est jamais marqué et elle est flexible.</Note>
+ <State ref="s26"/>
+ <State ref="s27"/>
+ </Categorical>
+ <Categorical ref="c12">
+ <State ref="s30"/>
+ </Categorical>
+ <Categorical ref="c13">
+ <State ref="s32"/>
+ </Categorical>
+ </SummaryData>
+ </CodedDescription>
+ <CodedDescription id="D7">
+ <Representation>
+ <Label>Ectatomminae</Label>
+ <MediaObject ref="m29"/>
+ <MediaObject ref="m30"/>
+ </Representation>
+ <Scope>
+ <TaxonName ref="t7"/>
+ </Scope>
+ <SummaryData>
+ <Categorical ref="c1">
+ <State ref="s1"/>
+ </Categorical>
+ <Categorical ref="c2">
+ <State ref="s3"/>
+ </Categorical>
+ <Categorical ref="c3">
+ <State ref="s7"/>
+ </Categorical>
+ <Categorical ref="c4">
+ <State ref="s8"/>
+ </Categorical>
+ <Categorical ref="c5"/>
+ <Categorical ref="c6">
+ <State ref="s13"/>
+ </Categorical>
+ <Categorical ref="c7">
+ <Status code="DataUnavailable"/>
+ </Categorical>
+ <Categorical ref="c8">
+ <State ref="s18"/>
+ </Categorical>
+ <Categorical ref="c9">
+ <State ref="s22"/>
+ </Categorical>
+ <Categorical ref="c10">
+ <State ref="s24"/>
+ </Categorical>
+ <Categorical ref="c11">
+ <Status code="DataUnavailable"/>
+ </Categorical>
+ <Categorical ref="c12">
+ <State ref="s29"/>
+ </Categorical>
+ <Categorical ref="c13">
+ <State ref="s32"/>
+ </Categorical>
+ </SummaryData>
+ </CodedDescription>
+ <CodedDescription id="D8">
+ <Representation>
+ <Label>Cerapachyinae</Label>
+ <MediaObject ref="m31"/>
+ <MediaObject ref="m32"/>
+ <MediaObject ref="m33"/>
+ <MediaObject ref="m34"/>
+ </Representation>
+ <Scope>
+ <TaxonName ref="t8"/>
+ </Scope>
+ <SummaryData>
+ <Categorical ref="c1">
+ <State ref="s1"/>
+ </Categorical>
+ <Categorical ref="c2">
+ <Note>Aiguillon bien dévellopé et fonctionnel.</Note>
+ <State ref="s4"/>
+ </Categorical>
+ <Categorical ref="c3">
+ <Status code="DataUnavailable"/>
+ </Categorical>
+ <Categorical ref="c4">
+ <Note>Il existe un rangée apicale ou marginale de courtes dents ou épines.</Note>
+ <State ref="s9"/>
+ </Categorical>
+ <Categorical ref="c5">
+ <State ref="s11"/>
+ </Categorical>
+ <Categorical ref="c6">
+ <Note>Les yeux sont généralement présents, très rarement réduits ou absents.</Note>
+ <State ref="s12"/>
+ </Categorical>
+ <Categorical ref="c7">
+ <State ref="s15"/>
+ <State ref="s17"/>
+ </Categorical>
+ <Categorical ref="c8">
+ <State ref="s20"/>
+ </Categorical>
+ <Categorical ref="c9">
+ <Status code="DataUnavailable"/>
+ </Categorical>
+ <Categorical ref="c10">
+ <State ref="s25"/>
+ </Categorical>
+ <Categorical ref="c11">
+ <Note>La plupart du temps, elle est complètement absente. Elle n'est que très rarement visible.</Note>
+ <State ref="s26"/>
+ <State ref="s28"/>
+ </Categorical>
+ <Categorical ref="c12">
+ <State ref="s30"/>
+ </Categorical>
+ <Categorical ref="c13">
+ <Status code="DataUnavailable"/>
+ </Categorical>
+ </SummaryData>
+ </CodedDescription>
+ <CodedDescription id="D9">
+ <Representation>
+ <Label>Genus Ectatom</Label>
+ </Representation>
+ <Scope>
+ <TaxonName ref="t9"/>
+ </Scope>
+ <SummaryData>
+ <Categorical ref="c1"/>
+ <Categorical ref="c2"/>
+ <Categorical ref="c3"/>
+ <Categorical ref="c4"/>
+ <Categorical ref="c5"/>
+ <Categorical ref="c6"/>
+ <Categorical ref="c7"/>
+ <Categorical ref="c8"/>
+ <Categorical ref="c9"/>
+ <Categorical ref="c10"/>
+ <Categorical ref="c11"/>
+ <Categorical ref="c12"/>
+ <Categorical ref="c13"/>
+ </SummaryData>
+ </CodedDescription>
+ </CodedDescriptions>
+ <Agents>
+ <Agent id="a0">
+ <Representation>
+ <Label>Unknown</Label>
+ </Representation>
+ </Agent>
+ </Agents>
+ <MediaObjects>
+ <MediaObject id="m1">
+ <Representation>
+ <Label>Dolichoderinae - m1</Label>
+ <Detail role="Caption">Dolichoderinae</Detail>
+ </Representation>
+ <Type>Image</Type>
+ <Source href="http://cybertaxonomy.eu/sites/wp5.e-taxonomy.eu/files/cybergate.PNG"/>
+ </MediaObject>
+ <MediaObject id="m2">
+ <Representation>
+ <Label>Dolichoderinae - m2</Label>
+ <Detail role="Caption">Dolichoderinae</Detail>
+ </Representation>
+ <Type>Image</Type>
+ <Source href="http://cybertaxonomy.eu/sites/wp5.e-taxonomy.eu/files/cybergate.PNG"/>
+ </MediaObject>
+ </MediaObjects>
+ </Dataset>
+</Datasets>
--- /dev/null
+<?xml version="1.0" encoding="UTF-8"?>
+<DataSet xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://www.tdwg.org/schemas/tcs/1.01 http://tdwg.napier.ac.uk/TCS_1.01/v101.xsd" xmlns="http://www.tdwg.org/schemas/tcs/1.01">
+ <!-- This is an instance document that tests as many different
+ applications of the schema as possible within a single document.
+ It is not meant to a 'realistic' example of a real data set
+ but a illustration of all the different types of data that can
+ be passed. -->
+ <MetaData>
+ <!-- to be completed -->
+ <Simple/>
+ </MetaData>
+ <Specimens>
+ <Specimen id="2">
+ <Simple/>
+ <Institution identifier=""/>
+ <Collection identifier="LE"/>
+ <SpecimenItem identifier=""/>
+ </Specimen>
+ </Specimens>
+ <Publications>
+ <Publication id="1">
+ <Simple>Fl. SSR</Simple>
+ </Publication>
+ <Publication id="2">
+ <Simple>Copeland, H.F. (1943). A study, anatomical and taxonomic, of the
+ genera of Rhododendroideae. Am. Midl.Nat. 30:533-625</Simple>
+ </Publication>
+ <Publication id="3">
+ <Simple>Wilson, E.H. & Rehder, A. (1921). A monograph of the azaleas.
+ Publication of the Arnold Arboretum No. 9 Harvard University, Cambridge
+ MA.</Simple>
+ </Publication>
+ <Publication id="4">
+ <Simple>Judd, W.S. & Kron, K.A. (1995) A Revision of Rhododendron VI
+ Edinb. J. Bot. 52(1): 1-54</Simple>
+ </Publication>
+ <Publication id="5">
+ <Simple>Maximoxicz, C.J. (1870) Rhododendron schlippenbachii. Mem. Acad. Sci.
+ St Petersbourg. ser.3 15.</Simple>
+ </Publication>
+ </Publications>
+ <TaxonNames>
+ <TaxonName id="0" nomenclaturalCode="Botanical">
+ <Simple>Rhododendron</Simple>
+ </TaxonName>
+ <TaxonName nomenclaturalCode="Botanical" id="1">
+ <Simple>Rhododendron subgenus Pentanthera (G. Don) Poyarkova</Simple>
+ <CanonicalName>
+ <Simple>Rhododedron subgenus Pentanthera</Simple>
+ <Genus>Rhododendron</Genus>
+ <InfragenericEpithet>Pentanthera</InfragenericEpithet>
+ </CanonicalName>
+ <CanonicalAuthorship>
+ <Simple>(G.Don) Poyarkova</Simple>
+ <BasionymAuthorship>
+ <Simple>G. Don</Simple>
+ <Authors>
+ <AgentName>G. Don</AgentName>
+ </Authors>
+ </BasionymAuthorship>
+ <CombinationAuthorship>
+ <Simple>Poyarkova</Simple>
+ <Authors>
+ <AgentName>Poyarkova</AgentName>
+ </Authors>
+ </CombinationAuthorship>
+ </CanonicalAuthorship>
+ <PublishedIn ref="1">Fl. SSR Vol 18 (1952)</PublishedIn>
+ <MicroReference>Page 57</MicroReference>
+ <Typification>
+ <Simple>Rhododendron flavum G.Don</Simple>
+ <!--
+ N.B. This could be linked to a full name entry if
+ required but no details are in the current monograph so
+ it isn't
+ -->
+ <TypeName/>
+ </Typification>
+ </TaxonName>
+ <TaxonName id="2" nomenclaturalCode="Botanical">
+ <Simple>Rhododendron sect. Sciadorhodion Rehder & Wilson</Simple>
+ <CanonicalName>
+ <Simple>Rhododendron sect. Sciadorhodion</Simple>
+ <Genus>Rhododendron</Genus>
+ <InfragenericEpithet>Sciadorhodion</InfragenericEpithet>
+ </CanonicalName>
+ <CanonicalAuthorship>
+ <Simple>Rehder & Wilson</Simple>
+ <BasionymAuthorship>
+ <Simple>Rehder & Wilson</Simple>
+ </BasionymAuthorship>
+ </CanonicalAuthorship>
+ <PublishedIn linkType="local" ref="3">Wislon & Rehder Monogr. Azaleas 79 (1921)</PublishedIn>
+ <MicroReference>Page 79</MicroReference>
+ <Typification>
+ <Simple/>
+ <TypeName>
+ <NameReference linkType="local" ref="3">Rhododendron quinquefolium Bisset
+ & Moore</NameReference>
+ <LectotypePublication ref="2">Copeland, H.F.(1943)</LectotypePublication>
+ </TypeName>
+ </Typification>
+ <Basionym>
+ <RelatedName ref="4">Azalea subgen. Sciadorhodion (Rhehder & Wilson)
+ Copeland</RelatedName>
+ </Basionym>
+ </TaxonName>
+ <TaxonName id="3" nomenclaturalCode="Botanical">
+ <Simple>Rhododendron quinquefolium Bisset & Moore</Simple>
+ </TaxonName>
+ <TaxonName id="4" nomenclaturalCode="Botanical">
+ <!-- for brevity this NameObject isn't fully expanded -->
+ <Simple>Azalea subgen. Sciadorhodion (Rhehder & Wilson) Copeland </Simple>
+ <Basionym>
+ <RelatedName ref="2">Rhododendron sect. Sciadorhodion Rehder &
+ Wilson</RelatedName>
+ </Basionym>
+ </TaxonName>
+ <TaxonName id="5" nomenclaturalCode="Botanical">
+ <Simple>Rhododendron schlippenbachii Maxim.</Simple>
+ <Rank code="sp">Species</Rank>
+ <CanonicalName>
+ <Simple>Rhododendron schlippenbachii</Simple>
+ <Genus>Rhododendron</Genus>
+ <SpecificEpithet>schlippenbachii</SpecificEpithet>
+ </CanonicalName>
+ <CanonicalAuthorship>
+ <Simple>Maxim.</Simple>
+ <BasionymAuthorship>
+ <Simple>Maxim.</Simple>
+ <Authors>
+ <AgentName>Maximoxicz, C.J.</AgentName>
+ </Authors>
+ </BasionymAuthorship>
+ </CanonicalAuthorship>
+ <PublishedIn ref="5">Bull. Acad. Sci. St Petersbourg, ser. 3 15 (1870)</PublishedIn>
+ <MicroReference>Page 226</MicroReference>
+ <Typification>
+ <Simple/>
+ <TypeVouchers>
+ <TypeVoucher typeOfType="lecto">
+ <VoucherReference linkType="local" ref="1"/>
+ <LectotypePublication ref="4"/>
+ <LectotypeMicroReference>Page 15</LectotypeMicroReference>
+ </TypeVoucher>
+ <TypeVoucher typeOfType="isolecto">
+ <VoucherReference linkType="local" ref="2"/>
+ <LectotypePublication ref="4"/>
+ <LectotypeMicroReference>Page 15</LectotypeMicroReference>
+ </TypeVoucher>
+ </TypeVouchers>
+ </Typification>
+ </TaxonName>
+ <TaxonName id="6" nomenclaturalCode="Botanical">
+ <Simple>Azalea schlippenbachii (Maxim.) Kuntze</Simple>
+ <CanonicalName>
+ <Simple>Azalea schlippenbachii</Simple>
+ <Genus>Azalea</Genus>
+ <SpecificEpithet>schlippenbachii</SpecificEpithet>
+ </CanonicalName>
+ <CanonicalAuthorship>
+ <Simple>(Maxim.) Kuntze</Simple>
+ <BasionymAuthorship>
+ <Simple>Maxim.</Simple>
+ </BasionymAuthorship>
+ <CombinationAuthorship>
+ <Simple>Kuntze</Simple>
+ </CombinationAuthorship>
+ </CanonicalAuthorship>
+ <PublishedIn>Revis. Gen.Pl. 2:387 (1891)</PublishedIn>
+ <Typification>
+ <Simple/>
+ <TypeVouchers>
+ <TypeVoucher typeOfType="lecto">
+ <VoucherReference ref="2">[Russia] Manchuria, shores of Possiet Bay, [SW of
+ Vladivostok], 1860, C. Maximowicz LE</VoucherReference>
+ <LectotypePublication ref="4"/>
+ <LectotypeMicroReference>Page 15</LectotypeMicroReference>
+ </TypeVoucher>
+ </TypeVouchers>
+ </Typification>
+ </TaxonName>
+ <TaxonName id="7" nomenclaturalCode="Botanical">
+ <Simple>Rhododendron pentaphyllum Maxim.</Simple>
+ <CanonicalName>
+ <Simple>Rhododendron pentaphyllum</Simple>
+ <Genus>Rhododendron</Genus>
+ <SpecificEpithet>pentaphyllum</SpecificEpithet>
+ </CanonicalName>
+ <CanonicalAuthorship>
+ <Simple>Maxim.</Simple>
+ </CanonicalAuthorship>
+ <PublishedIn>Bull. Acad. Sci. St Petersbourg, ser. 3, 31:65 (1887)</PublishedIn>
+ <Typification>
+ <Simple/>
+ <TypeVouchers>
+ <TypeVoucher typeOfType="holo">
+ <VoucherReference>Japan, Kyushiu, prov. Osumi, summit, Mt Taka-kuma, Tashiro
+ (LE)</VoucherReference>
+ </TypeVoucher>
+ </TypeVouchers>
+
+ </Typification>
+ </TaxonName>
+ <TaxonName id="8" nomenclaturalCode="Botanical">
+ <Simple>Azalea pentaphylla (Maxim.) Copeland</Simple>
+ <CanonicalName>
+ <Simple>Azalea pentaphylla</Simple>
+ <Genus>Azalea</Genus>
+ <SpecificEpithet>pentaphylla</SpecificEpithet>
+ </CanonicalName>
+ <CanonicalAuthorship>
+ <Simple>(Maxim.) Copeland</Simple>
+ <BasionymAuthorship>
+ <Simple>Maxim.</Simple>
+ </BasionymAuthorship>
+ <CombinationAuthorship>
+ <Simple>Copeland</Simple>
+ </CombinationAuthorship>
+ </CanonicalAuthorship>
+ <PublishedIn>Am.Midl.Nat. 30:595 (1943)</PublishedIn>
+ <Typification>
+ <Simple/>
+ <TypeVouchers>
+ <TypeVoucher typeOfType="holo">
+ <VoucherReference>Japan, Kyushiu, prov. Osumi, summit, Mt Taka-kuma, Tashiro
+ (LE)</VoucherReference>
+ </TypeVoucher>
+ </TypeVouchers>
+ </Typification>
+ </TaxonName>
+ <TaxonName id="9" nomenclaturalCode="Botanical">
+ <Simple>Rhododendron pentaphyllum var. nikoense Komatsu</Simple>
+ <Rank code="var">variety</Rank>
+ <CanonicalName>
+ <Simple>Rhododendron pentaphyllum var. nikoense</Simple>
+ <Genus ref="0">Rhododendron</Genus>
+ <SpecificEpithet>pentaphyllum</SpecificEpithet>
+ <InfraspecificEpithet>nikoense</InfraspecificEpithet>
+ </CanonicalName>
+ <CanonicalAuthorship>
+ <Simple>Konatsu</Simple>
+ </CanonicalAuthorship>
+ <PublishedIn>Icon. Pl. Koisikav. 3: 45, t 168 (1916)</PublishedIn>
+ </TaxonName>
+ <TaxonName id="10" nomenclaturalCode="Botanical">
+ <Simple>Rhododendron nikoense (Komatsu) Nakai</Simple>
+ <Rank code="sp">Species</Rank>
+ <CanonicalName>
+ <Simple>Rhododendron nikoense</Simple>
+ <Genus ref="0">Rhododendron</Genus>
+ <SpecificEpithet>nikoense</SpecificEpithet>
+ </CanonicalName>
+ <CanonicalAuthorship>
+ <Simple>(Komatsu) Nakai</Simple>
+ <BasionymAuthorship>
+ <Simple>Komatsu</Simple>
+ </BasionymAuthorship>
+ <CombinationAuthorship>
+ <Simple>Nakai</Simple>
+ </CombinationAuthorship>
+ </CanonicalAuthorship>
+ <PublishedIn>Nakai & Koidz. Trees and Shrubs Japan 1: 68 (1922)</PublishedIn>
+ <Basionym>
+ <RelatedName ref="9">Rhododendron pentaphyllum var. nikoense</RelatedName>
+ </Basionym>
+ </TaxonName>
+ <TaxonName id="11" nomenclaturalCode="Botanical">
+ <Simple>Rhododendron quinquefolium Bisset & S. Moore var. roseum Rehder</Simple>
+ <Rank code="var">variety</Rank>
+ <CanonicalName>
+ <Simple>Rhododendron quinquefolium</Simple>
+ <Genus ref="0">Rhododendron</Genus>
+ <SpecificEpithet>quinquefolium</SpecificEpithet>
+ <InfraspecificEpithet>roseum</InfraspecificEpithet>
+ </CanonicalName>
+ <CanonicalAuthorship>
+ <Simple>Rehder</Simple>
+ </CanonicalAuthorship>
+ <PublishedIn>Bailey, Stand. Cycl. Hort. 5: 2947 (1916)</PublishedIn>
+ </TaxonName>
+ <TaxonName id="12" nomenclaturalCode="Botanical">
+ <Simple>Rhododendron pentaphyllum Maxim. var. shikokianum T. Yamazaki</Simple>
+ <Rank code="sp">species</Rank>
+ <CanonicalName>
+ <Simple>Rhododendron pentaphyllum var. shikokianum</Simple>
+ <Genus ref="0">Rhododendron</Genus>
+ <SpecificEpithet>pentaphyllum</SpecificEpithet>
+ <InfraspecificEpithet>shikokianum</InfraspecificEpithet>
+ </CanonicalName>
+ <CanonicalAuthorship>
+ <Simple>T. Yamazaki</Simple>
+ </CanonicalAuthorship>
+ <PublishedIn>Jap. Bot. 63: 312 (1988)</PublishedIn>
+ </TaxonName>
+ </TaxonNames>
+ <TaxonConcepts>
+ <TaxonConcept id="1">
+ <Name scientific="true" linkType="local" ref="2">Rhododendron sect. Sciadorhodion Rehder
+ & Wilson</Name>
+ <Rank code="sect">Section</Rank>
+ <AccordingTo>
+ <Simple>Judd & Kron (1995)</Simple>
+ <AccordingToDetailed>
+ <PublishedIn linkType="local" ref="4">Judd & Kron (1995) A Revision of
+ Rhododendron VI </PublishedIn>
+ <MicroReference>Page 13-14</MicroReference>
+ </AccordingToDetailed>
+ </AccordingTo>
+ <TaxonRelationships>
+ <TaxonRelationship type="is parent taxon of">
+ <ToTaxonConcept linkType="local" ref="2"/>
+ </TaxonRelationship>
+ </TaxonRelationships>
+ </TaxonConcept>
+ <TaxonConcept id="2">
+ <Name scientific="true" linkType="local" ref="5">Rhododendron schlippenbachii Maxim.</Name>
+ <AccordingTo>
+ <Simple>Judd & Kron (1995)</Simple>
+ <AccordingToDetailed>
+ <PublishedIn linkType="local" ref="4"/>
+ <MicroReference>Page 15</MicroReference>
+ </AccordingToDetailed>
+ </AccordingTo>
+ <TaxonRelationships>
+ <TaxonRelationship type="is child taxon of">
+ <ToTaxonConcept ref="1">Rhododendron sect. Sciadorhodion Rehder &
+ Wilson</ToTaxonConcept>
+ </TaxonRelationship>
+ </TaxonRelationships>
+ </TaxonConcept>
+ <TaxonConcept id="3">
+ <Name scientific="true" ref="6">Azalea schlippenbachii (Maxim.) Kuntze</Name>
+ <AccordingTo>
+ <Simple>Kuntze (1891)</Simple>
+ </AccordingTo>
+ <TaxonRelationships>
+ <TaxonRelationship type="is congruent to">
+ <ToTaxonConcept ref="2"/>
+ </TaxonRelationship>
+ </TaxonRelationships>
+ </TaxonConcept>
+ <TaxonConcept id="4">
+ <Name scientific="true" ref="7">Rhododendron pentaphyllum Maxim.</Name>
+ <AccordingTo>
+ <Simple>Judd & Kron (1995)</Simple>
+ </AccordingTo>
+ <TaxonRelationships>
+ <!-- relationships linking to taxonconcept without any descriptive string -->
+ <TaxonRelationship type="has synonym">
+ <ToTaxonConcept ref="6"/>
+ </TaxonRelationship>
+ <TaxonRelationship type="has synonym">
+ <ToTaxonConcept ref="7"/>
+ </TaxonRelationship>
+ <!-- relationship with linking reference to another taxon concept and string description of concept -->
+ <TaxonRelationship type="has synonym">
+ <ToTaxonConcept ref="8">Rhododendron pentaphyllum var. nikoense
+ Komatsu</ToTaxonConcept>
+ </TaxonRelationship>
+ <!-- relationships without linking -->
+ <TaxonRelationship type="has synonym">
+ <ToTaxonConcept>Rhododendron pentaphyllum Maxim. var. shikokianum T.
+ Yamazaki</ToTaxonConcept>
+ </TaxonRelationship>
+ <TaxonRelationship type="has synonym">
+ <ToTaxonConcept>Rhododendron quinquefolium Bisset & S. Moore var. roseum
+ Rehder</ToTaxonConcept>
+ </TaxonRelationship>
+ </TaxonRelationships>
+ </TaxonConcept>
+ <TaxonConcept id="6">
+ <Name scientific="true">Rhododendron nikoense (Komatsu) Nakai</Name>
+ </TaxonConcept>
+ <TaxonConcept id="7">
+ <Name scientific="true" ref="10">Rhododendron nikoense (Komatsu) Nakai</Name>
+ </TaxonConcept>
+ <TaxonConcept id="8">
+ <Name scientific="true" ref="9">Rhododendron pentaphyllum var. nikoense Komatsu</Name>
+ </TaxonConcept>
+ </TaxonConcepts>
+</DataSet>
--- /dev/null
+<?xml version="1.0" encoding="UTF-8"?>
+<!DOCTYPE log4j:configuration SYSTEM "log4j.dtd">
+<log4j:configuration xmlns:log4j="http://jakarta.apache.org/log4j/" debug="false">
+ <appender name="CONSOLE" class="org.apache.log4j.ConsoleAppender">
+ <param name="Target" value="System.out"/>
+ <layout class="org.apache.log4j.PatternLayout">
+ <param name="ConversionPattern" value="%d %p [%c] - %m%n"/>
+ </layout>
+ <filter class="org.apache.log4j.filter.ExpressionFilter">
+ <param name="expression" value="msg like '.*has a maxElementsInMemory of 0. This might lead to performance degradation or OutOfMemoryError at Terracotta client.*'" />
+ <param name="acceptOnMatch" value="false"/>
+ </filter>
+ </appender>
+ <root>
+ <priority value ="WARN" />
+ <appender-ref ref="CONSOLE"/>
+ </root>
+ <logger name="org.hibernate.proxy.AbstractLazyInitializer">
+ <level value="info"/>
+ </logger>
+ <logger name="org.hibernate.collection.internal.AbstractPersistentCollection">
+ <level value="info"/>
+ </logger>
+</log4j:configuration>
\ No newline at end of file
--- /dev/null
+httpPort=9090
+stopPort=9191
+stopKey=jetty-cdm-server
+user=admin
+password=00000
--- /dev/null
+#
+# NOTE: this is the unitils.properties file for the cdmlib-persistence module
+# a separate unitils.properties exists for cdmlib-io and for cdmlib-services
+#
+#
+# the list of all properties is found in
+# http://unitils.org/unitils-default.properties
+#
+
+### Unitils Modules ###
+# List of modules that is loaded. Overloading this list is normally not useful, unless you want to add a custom
+# module. Disabling a module can be performed by setting unitils.module.<modulename>.enabled to false.
+# If a module's specific dependencies are not found (e.g. hibernate is not in you classpath), this module is not loaded,
+# even if it is in this list and the enabled property is set to true. It's therefore not strictly necessary to disable
+# any of these modules.
+#DEFAULT: unitils.modules=database,dbunit,hibernate,mock,easymock,inject,spring,jpa
+unitils.module.easymock.enabled=false
+unitils.module.mock.enabled=false
+
+
+### Database ###
+#
+# Name or path of the user specific properties file. This file should contain the necessary parameters to connect to the
+# developer's own unit test schema. It is recommended to override the name of this file in the project specific properties
+# file, to include the name of the project. The system will try to find this file in the classpath, the user home folder
+# (recommended) or the local filesystem.
+#
+unitils.configuration.localFileName=unitils-cdmlib-local.properties
+
+# H2 #
+#
+database.driverClassName=org.h2.Driver
+#database.url=jdbc:h2:file:./src/main/resources/h2/cdmTest;AUTO_SERVER=TRUE
+database.url=jdbc:h2:file:./target/classes/h2/cdmTest;AUTO_SERVER=TRUE
+database.dialect=h2
+database.userName=sa
+database.password=
+database.schemaNames=PUBLIC
+org.dbunit.dataset.datatype.IDataTypeFactory.implClassName.h2=org.dbunit.ext.h2.H2DataTypeFactory
+org.unitils.core.dbsupport.DbSupport.implClassName.h2=eu.etaxonomy.taxeditor.util.H2DbSupport
+database.storedIndentifierCase.h2=auto
+database.identifierQuoteString.h2=auto
+
+
+#### Transaction mode ###
+#
+# If set to commit or rollback, each test is run in a transaction,
+# which is committed or rolled back after the test is finished.
+# Since we have many tests with incomplete data these tests would be
+# failing during commit so it is better use rollback as default
+# and set commit for individual test where necessary
+DatabaseModule.Transactional.value.default=rollback
+
+# org.unitils.database.transaction.impl.DefaultUnitilsTransactionManager is used by default:
+#
+# Implements transactions for unit tests, by delegating to a spring PlatformTransactionManager.
+# The concrete implementation of PlatformTransactionManager that is used depends on the test class.
+# If a custom PlatformTransactionManager was configured in a spring ApplicationContext, this one is used.
+# If not, a suitable subclass of PlatformTransactionManager is created, depending on the configuration
+# of a test. E.g. if some ORM persistence unit was configured on the test, a PlatformTransactionManager
+# that can offer transactional behavior for such a persistence unit is used.
+# If no such configuration is found, a DataSourceTransactionManager is used.
+#
+# org.unitils.database.transaction.UnitilsTransactionManager.implClassName=org.unitils.database.transaction.impl.SpringTransactionManager
+
+### Hibernate ###
+#
+HibernateModule.configuration.implClassName=org.hibernate.cfg.Configuration
+
<?xml version="1.0" encoding="UTF-8"?>
-<?pde version="3.5"?><product application="eu.etaxonomy.taxeditor.application.application" id="eu.etaxonomy.taxeditor.application.eu_etaxonomy_taxeditor_product" includeLaunchers="true" name="EDIT Taxonomic Editor" uid="eu.etaxonomy.taxeditor.product" useFeatures="true" version="3.8.0.qualifier">
+<?pde version="3.5"?><product application="eu.etaxonomy.taxeditor.application.application" id="eu.etaxonomy.taxeditor.application.eu_etaxonomy_taxeditor_product" includeLaunchers="true" name="EDIT Taxonomic Editor" uid="eu.etaxonomy.taxeditor.product" useFeatures="true" version="3.12.0.SNAPSHOT">
<aboutInfo>
<image path="/eu.etaxonomy.taxeditor.application/icons/256color_48x48.gif"/>
<text>
<?xml version="1.0" encoding="UTF-8"?>
<?pde version="3.5"?>
-<product name="EDIT Taxonomic Editor" uid="eu.etaxonomy.taxeditor.product.jre" id="eu.etaxonomy.taxeditor.application.eu_etaxonomy_taxeditor_product" application="eu.etaxonomy.taxeditor.application.application" version="3.8.0.qualifier" useFeatures="true" includeLaunchers="true">
+<product name="EDIT Taxonomic Editor" uid="eu.etaxonomy.taxeditor.product.jre" id="eu.etaxonomy.taxeditor.application.eu_etaxonomy_taxeditor_product" application="eu.etaxonomy.taxeditor.application.application" version="3.9.0.qualifier" useFeatures="true" includeLaunchers="true">
<aboutInfo>
<image path="/eu.etaxonomy.taxeditor.application/icons/256color_48x48.gif"/>
<parent>
<groupId>eu.etaxonomy</groupId>
<artifactId>taxeditor-parent</artifactId>
- <version>3.8.0-SNAPSHOT</version>
+ <version>3.12.0-SNAPSHOT</version>
</parent>
<modelVersion>4.0.0</modelVersion>
<name>EDIT Taxonomic Editor Product</name>
<description>The EDIT Taxonomic Desktop Editor</description>
<url>http://wp5.e-taxonomy.eu/taxeditor</url>
- <properties>
+ <properties>
<product.id>eu.etaxonomy.taxeditor.product</product.id>
</properties>
- <build>
- <plugins>
- <plugin>
- <groupId>org.eclipse.tycho</groupId>
- <artifactId>tycho-p2-director-plugin</artifactId>
- <version>${tycho.version}</version>
- <executions>
- <execution>
- <id>materialize-products</id>
- <goals>
- <goal>materialize-products</goal>
- </goals>
- </execution>
- <execution>
- <id>archive-products</id>
- <goals>
- <goal>archive-products</goal>
- </goals>
- </execution>
- </executions>
- <configuration>
- <products>
- <product>
- <id>${product.id}</id>
- <rootFolder>EDIT Taxonomic Editor</rootFolder>
- </product>
- </products>
- </configuration>
- </plugin>
- </plugins>
- </build>
+
<profiles>
+ <profile>
+ <id>buildProducts</id>
+ <build>
+ <plugins>
+ <plugin>
+ <groupId>org.eclipse.tycho</groupId>
+ <artifactId>tycho-p2-director-plugin</artifactId>
+ <version>${tycho.version}</version>
+ <executions>
+ <execution>
+ <id>materialize-products</id>
+ <goals>
+ <goal>materialize-products</goal>
+ </goals>
+ </execution>
+ <execution>
+ <id>archive-products</id>
+ <goals>
+ <goal>archive-products</goal>
+ </goals>
+ </execution>
+ </executions>
+ <configuration>
+ <products>
+ <product>
+ <id>${product.id}</id>
+ <rootFolder>EDIT Taxonomic Editor</rootFolder>
+ </product>
+ </products>
+ </configuration>
+ </plugin>
+ </plugins>
+ </build>
+ </profile>
<profile>
<id>signJars</id>
<build>
<?xml version="1.0" encoding="UTF-8"?>
-
<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/maven-v4_0_0.xsd">
+<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/maven-v4_0_0.xsd">
<modelVersion>4.0.0</modelVersion>
<prerequisites>
<maven>3.0</maven>
</prerequisites>
<groupId>eu.etaxonomy</groupId>
<artifactId>taxeditor-parent</artifactId>
- <version>3.8.0-SNAPSHOT</version>
+ <version>3.12.0-SNAPSHOT</version>
<name>EDIT Taxonomic Editor</name>
<description>The Taxonomic Editor for EDIT's platform for
cybertaxonomy
<properties>
<java.codelevel>1.6</java.codelevel>
<project.build.sourceEncoding>UTF-8</project.build.sourceEncoding>
- <cdmlib.version>3.8.0-SNAPSHOT</cdmlib.version>
+ <cdmlib.version>3.12.0-SNAPSHOT</cdmlib.version>
<!-- TODO can we use project.version ????? -->
<tycho.version>0.22.0</tycho.version>
- <taxeditor.version>3.8.0-SNAPSHOT</taxeditor.version>
+ <taxeditor.version>3.12.0-SNAPSHOT</taxeditor.version>
<update.dir>snapshot</update.dir>
+ <unitils.version>3.4.2</unitils.version>
</properties>
<modules>
<module>eu.etaxonomy.taxeditor.cdmlib</module>
BGBM BDI Projects / taxeditor.git / commitdiff