New JPhyloIO package now exported by molecular.lib.
authorb.stoever <stoever@bioinfweb.info>
Mon, 14 Nov 2016 16:34:28 +0000 (17:34 +0100)
committerb.stoever <stoever@bioinfweb.info>
Mon, 14 Nov 2016 16:34:28 +0000 (17:34 +0100)
commit9a9359ce4d97cc499f5ec794ac634c9b0812fba6
tree8b75c4d833725c26e9e174bb24ecc424edcf32ff
parent0608d73327240781e5168bc325ce663b6795a7a6
New JPhyloIO package now exported by molecular.lib.
SingleReadAlignmentPredicates renamed to SingleReadAlignmentRDFXMLConstants.
Pherogram alignment shifts are now written to single read export unsing a custom ObjectTranslator implementation.
eu.etaxonomy.taxeditor.molecular.lib/META-INF/MANIFEST.MF
eu.etaxonomy.taxeditor.molecular/src/main/java/eu/etaxonomy/taxeditor/molecular/editor/AlignmentEditor.java
eu.etaxonomy.taxeditor.molecular/src/main/java/eu/etaxonomy/taxeditor/molecular/handler/ExportSequenceToFileHandler.java
eu.etaxonomy.taxeditor.molecular/src/main/java/eu/etaxonomy/taxeditor/molecular/io/CDMPherogramAlignmentObjectTranslator.java [new file with mode: 0644]
eu.etaxonomy.taxeditor.molecular/src/main/java/eu/etaxonomy/taxeditor/molecular/io/CDMSequenceMatrixAdapter.java
eu.etaxonomy.taxeditor.molecular/src/main/java/eu/etaxonomy/taxeditor/molecular/io/SingleReadAlignmentPredicates.java [deleted file]
eu.etaxonomy.taxeditor.molecular/src/main/java/eu/etaxonomy/taxeditor/molecular/io/SingleReadAlignmentRDFXMLConstants.java [new file with mode: 0644]
eu.etaxonomy.taxeditor.molecular/src/main/java/eu/etaxonomy/taxeditor/molecular/io/wizard/ExportSingleReadAlignmentWizardPage.java