Dependency refactoring
authorPatric Plitzner <p.plitzner@bgbm.org>
Wed, 15 Jul 2015 11:00:51 +0000 (11:00 +0000)
committerPatric Plitzner <p.plitzner@bgbm.org>
Wed, 15 Jul 2015 11:00:51 +0000 (11:00 +0000)
commit6fa5e6c38394b8ff81ab74b86148090c1c279b76
treef2dbffa5560bf2485d500ce4315998621d915f68
parenta2a186f364f77d581311e622577a62a2f197c96c
Dependency refactoring

Arranged classes and classpath in accordance to other taxeditor projects.
28 files changed:
.gitattributes
eu.etaxonomy.taxeditor.molecular/.classpath
eu.etaxonomy.taxeditor.molecular/META-INF/MANIFEST.MF
eu.etaxonomy.taxeditor.molecular/build.properties
eu.etaxonomy.taxeditor.molecular/plugin.xml
eu.etaxonomy.taxeditor.molecular/src/main/java/eu/etaxonomy/taxeditor/molecular/TaxeditorMolecularPlugin.java [moved from eu.etaxonomy.taxeditor.molecular/src/eu/etaxonomy/taxeditor/molecular/TaxeditorMolecularPlugin.java with 100% similarity]
eu.etaxonomy.taxeditor.molecular/src/main/java/eu/etaxonomy/taxeditor/molecular/editor/AlignmentEditor.java [moved from eu.etaxonomy.taxeditor.molecular/src/eu/etaxonomy/taxeditor/molecular/editor/AlignmentEditor.java with 100% similarity]
eu.etaxonomy.taxeditor.molecular/src/main/java/eu/etaxonomy/taxeditor/molecular/editor/AlignmentEditorInput.java [moved from eu.etaxonomy.taxeditor.molecular/src/eu/etaxonomy/taxeditor/molecular/editor/AlignmentEditorInput.java with 100% similarity]
eu.etaxonomy.taxeditor.molecular/src/main/java/eu/etaxonomy/taxeditor/molecular/editor/PherogramMouseListener.java [moved from eu.etaxonomy.taxeditor.molecular/src/eu/etaxonomy/taxeditor/molecular/editor/PherogramMouseListener.java with 100% similarity]
eu.etaxonomy.taxeditor.molecular/src/main/java/eu/etaxonomy/taxeditor/molecular/editor/PherogramViewPart.java [moved from eu.etaxonomy.taxeditor.molecular/src/eu/etaxonomy/taxeditor/molecular/editor/PherogramViewPart.java with 100% similarity]
eu.etaxonomy.taxeditor.molecular/src/main/java/eu/etaxonomy/taxeditor/molecular/handler/AbstractAlignmentEditorHandler.java [moved from eu.etaxonomy.taxeditor.molecular/src/eu/etaxonomy/taxeditor/molecular/handler/AbstractAlignmentEditorHandler.java with 100% similarity]
eu.etaxonomy.taxeditor.molecular/src/main/java/eu/etaxonomy/taxeditor/molecular/handler/AbstractPherogramComponentHandler.java [moved from eu.etaxonomy.taxeditor.molecular/src/eu/etaxonomy/taxeditor/molecular/handler/AbstractPherogramComponentHandler.java with 100% similarity]
eu.etaxonomy.taxeditor.molecular/src/main/java/eu/etaxonomy/taxeditor/molecular/handler/ChangePherogramQualityOutputType.java [moved from eu.etaxonomy.taxeditor.molecular/src/eu/etaxonomy/taxeditor/molecular/handler/ChangePherogramQualityOutputType.java with 100% similarity]
eu.etaxonomy.taxeditor.molecular/src/main/java/eu/etaxonomy/taxeditor/molecular/handler/CreateConsensusSequenceHandler.java [moved from eu.etaxonomy.taxeditor.molecular/src/eu/etaxonomy/taxeditor/molecular/handler/CreateConsensusSequenceHandler.java with 100% similarity]
eu.etaxonomy.taxeditor.molecular/src/main/java/eu/etaxonomy/taxeditor/molecular/handler/CutPherogramLeftHandler.java [moved from eu.etaxonomy.taxeditor.molecular/src/eu/etaxonomy/taxeditor/molecular/handler/CutPherogramLeftHandler.java with 100% similarity]
eu.etaxonomy.taxeditor.molecular/src/main/java/eu/etaxonomy/taxeditor/molecular/handler/CutPherogramRightHandler.java [moved from eu.etaxonomy.taxeditor.molecular/src/eu/etaxonomy/taxeditor/molecular/handler/CutPherogramRightHandler.java with 100% similarity]
eu.etaxonomy.taxeditor.molecular/src/main/java/eu/etaxonomy/taxeditor/molecular/handler/EditSequenceHandler.java [moved from eu.etaxonomy.taxeditor.molecular/src/eu/etaxonomy/taxeditor/molecular/handler/EditSequenceHandler.java with 100% similarity]
eu.etaxonomy.taxeditor.molecular/src/main/java/eu/etaxonomy/taxeditor/molecular/handler/HandlerTools.java [moved from eu.etaxonomy.taxeditor.molecular/src/eu/etaxonomy/taxeditor/molecular/handler/HandlerTools.java with 100% similarity]
eu.etaxonomy.taxeditor.molecular/src/main/java/eu/etaxonomy/taxeditor/molecular/handler/LoadPherogramHandler.java [moved from eu.etaxonomy.taxeditor.molecular/src/eu/etaxonomy/taxeditor/molecular/handler/LoadPherogramHandler.java with 100% similarity]
eu.etaxonomy.taxeditor.molecular/src/main/java/eu/etaxonomy/taxeditor/molecular/handler/ReverseComplementHandler.java [moved from eu.etaxonomy.taxeditor.molecular/src/eu/etaxonomy/taxeditor/molecular/handler/ReverseComplementHandler.java with 100% similarity]
eu.etaxonomy.taxeditor.molecular/src/main/java/eu/etaxonomy/taxeditor/molecular/handler/ShowPherogramHandler.java [moved from eu.etaxonomy.taxeditor.molecular/src/eu/etaxonomy/taxeditor/molecular/handler/ShowPherogramHandler.java with 100% similarity]
eu.etaxonomy.taxeditor.molecular/src/main/java/eu/etaxonomy/taxeditor/molecular/handler/SpecimenPropertyTester.java [moved from eu.etaxonomy.taxeditor.molecular/src/eu/etaxonomy/taxeditor/molecular/handler/SpecimenPropertyTester.java with 100% similarity]
eu.etaxonomy.taxeditor.molecular/src/main/java/eu/etaxonomy/taxeditor/molecular/handler/ToggleInsertOverwriteHandler.java [moved from eu.etaxonomy.taxeditor.molecular/src/eu/etaxonomy/taxeditor/molecular/handler/ToggleInsertOverwriteHandler.java with 100% similarity]
eu.etaxonomy.taxeditor.molecular/src/main/java/eu/etaxonomy/taxeditor/molecular/handler/ToggleLeftRightInsertionHandler.java [moved from eu.etaxonomy.taxeditor.molecular/src/eu/etaxonomy/taxeditor/molecular/handler/ToggleLeftRightInsertionHandler.java with 100% similarity]
eu.etaxonomy.taxeditor.molecular/src/main/java/eu/etaxonomy/taxeditor/molecular/handler/ToggleShowPherogramBaseCallLinesHandler.java [moved from eu.etaxonomy.taxeditor.molecular/src/eu/etaxonomy/taxeditor/molecular/handler/ToggleShowPherogramBaseCallLinesHandler.java with 100% similarity]
eu.etaxonomy.taxeditor.molecular/src/main/java/eu/etaxonomy/taxeditor/molecular/handler/ToggleShowPherogramProbabilitiesHandler.java [moved from eu.etaxonomy.taxeditor.molecular/src/eu/etaxonomy/taxeditor/molecular/handler/ToggleShowPherogramProbabilitiesHandler.java with 100% similarity]
eu.etaxonomy.taxeditor.molecular/src/main/java/eu/etaxonomy/taxeditor/molecular/handler/UpdateConsensusSequenceHandler.java [moved from eu.etaxonomy.taxeditor.molecular/src/eu/etaxonomy/taxeditor/molecular/handler/UpdateConsensusSequenceHandler.java with 100% similarity]
eu.etaxonomy.taxeditor.molecular/src/main/java/eu/etaxonomy/taxeditor/molecular/handler/package-info.java [moved from eu.etaxonomy.taxeditor.molecular/src/eu/etaxonomy/taxeditor/molecular/handler/package-info.java with 73% similarity]