X-Git-Url: https://dev.e-taxonomy.eu/gitweb/taxeditor.git/blobdiff_plain/e6fcf4e891b6d74430c9a8eea772656153fc04f9..ab08477fbd194f09997ef79a59b803b08be20bb1:/eu.etaxonomy.taxeditor.store/src/main/java/eu/etaxonomy/taxeditor/io/ExportManager.java
diff --git a/eu.etaxonomy.taxeditor.store/src/main/java/eu/etaxonomy/taxeditor/io/ExportManager.java b/eu.etaxonomy.taxeditor.store/src/main/java/eu/etaxonomy/taxeditor/io/ExportManager.java
index 2c659e804..00308aff9 100644
--- a/eu.etaxonomy.taxeditor.store/src/main/java/eu/etaxonomy/taxeditor/io/ExportManager.java
+++ b/eu.etaxonomy.taxeditor.store/src/main/java/eu/etaxonomy/taxeditor/io/ExportManager.java
@@ -6,189 +6,166 @@
* The contents of this file are subject to the Mozilla Public License Version 1.1
* See LICENSE.TXT at the top of this package for the full license terms.
*/
-
package eu.etaxonomy.taxeditor.io;
+import java.io.BufferedWriter;
import java.io.File;
import java.io.FileOutputStream;
-
+import java.io.OutputStreamWriter;
+import java.io.Writer;
+import java.text.SimpleDateFormat;
+import java.util.ArrayList;
+import java.util.Calendar;
+import java.util.List;
+import java.util.Map;
+import java.util.Set;
+import java.util.UUID;
+import java.util.zip.ZipEntry;
+import java.util.zip.ZipOutputStream;
+
+import org.apache.logging.log4j.LogManager;
+import org.apache.logging.log4j.Logger;
import org.eclipse.core.runtime.Assert;
import org.eclipse.core.runtime.IProgressMonitor;
import org.eclipse.core.runtime.IStatus;
import org.eclipse.core.runtime.Status;
+import org.eclipse.core.runtime.SubMonitor;
import org.eclipse.core.runtime.jobs.Job;
import org.eclipse.swt.widgets.Display;
-import org.eclipse.ui.IWorkbenchPart;
import eu.etaxonomy.cdm.api.application.CdmApplicationState;
import eu.etaxonomy.cdm.api.application.ICdmRepository;
-import eu.etaxonomy.cdm.api.conversation.IConversationEnabled;
-import eu.etaxonomy.cdm.io.common.CdmDefaultExport;
+import eu.etaxonomy.cdm.common.monitor.IRemotingProgressMonitor;
+import eu.etaxonomy.cdm.io.cdmLight.CdmLightExportConfigurator;
+import eu.etaxonomy.cdm.io.coldp.ColDpExportConfigurator;
+import eu.etaxonomy.cdm.io.common.ExportDataWrapper;
import eu.etaxonomy.cdm.io.common.ExportResult;
+import eu.etaxonomy.cdm.io.common.ExportResultType;
import eu.etaxonomy.cdm.io.common.IExportConfigurator;
import eu.etaxonomy.cdm.io.common.IIoConfigurator;
+import eu.etaxonomy.cdm.io.dwca.out.DwcaTaxExportConfigurator;
import eu.etaxonomy.cdm.io.jaxb.JaxbExportConfigurator;
import eu.etaxonomy.cdm.io.sdd.out.SDDExportConfigurator;
import eu.etaxonomy.cdm.io.service.IIOService;
+import eu.etaxonomy.cdm.io.wfo.out.WfoBackboneExportConfigurator;
+import eu.etaxonomy.taxeditor.model.AbstractUtility;
import eu.etaxonomy.taxeditor.model.CdmProgressMonitorAdapter;
import eu.etaxonomy.taxeditor.model.MessagingUtils;
-import eu.etaxonomy.taxeditor.store.StoreUtil;
+import eu.etaxonomy.taxeditor.operation.IFeedbackGenerator;
+import eu.etaxonomy.taxeditor.operation.IPostMoniteredOperationEnabled;
+import eu.etaxonomy.taxeditor.store.CdmStore;
import eu.etaxonomy.taxeditor.store.internal.TaxeditorStorePlugin;
/**
- *
- * ExportHandler class.
- *
- *
* @author n.hoffmann
* @created Sep 11, 2009
- * @version 1.0
*/
-public class ExportManager extends AbstractIOManager {
+public class ExportManager
+ extends AbstractIOManager
+ implements IPostMoniteredOperationEnabled {
+
+ private static final Logger logger = LogManager.getLogger();
+
+ /** Constant DATE_FORMAT_NOW="yyyyMMddHHmm" */
+ public static final String DATE_FORMAT_NOW = "yyyyMMddHHmm";
+
+ private final String successMessage = "The export was successful";
- /**
- *
- * @param applicationConfiguration
- */
private ExportManager(ICdmRepository applicationConfiguration) {
super(applicationConfiguration);
}
- /**
- *
- * NewInstance
- *
- *
- * @param applicationConfiguration
- * a
- * {@link eu.etaxonomy.cdm.api.application.CdmApplicationController}
- * object.
- * @return a {@link eu.etaxonomy.taxeditor.io.ExportManager} object.
- */
public static ExportManager NewInstance(
ICdmRepository applicationConfiguration) {
return new ExportManager(applicationConfiguration);
}
- /**
- *
- * createIOJob
- *
- *
- * @param configurator
- * a {@link eu.etaxonomy.cdm.io.common.IExportConfigurator}
- * object.
- * @return a {@link org.eclipse.core.runtime.jobs.Job} object.
- */
- @Override
- protected Job createIOJob(final IExportConfigurator configurator) {
-
- Assert.isNotNull(configurator, "Configuration may not be null");
-
- final Display display = Display.getCurrent();
-
- Job job = new Job("Export: " + configurator.getClass().getSimpleName()) {
- @Override
- protected IStatus run(IProgressMonitor monitor) {
- monitor.beginTask(
- "Exporting database. This will take some time.", 100);
- monitor.worked(10);
-
- /** see ticket # 4456 and */
-// display.asyncExec(new Runnable() {
-//
-// @Override
-// public void run() {
-//
-// // terminate any open transactions
-// IConversationEnabled activePart = (IConversationEnabled) StoreUtil
-// .getActivePage().getActivePart();
-// activePart.getConversationHolder().commit(false);
-// }
-// });
-
-// monitor.worked(10);
-
- CdmDefaultExport exporter = new CdmDefaultExport();
- configurator.setProgressMonitor(CdmProgressMonitorAdapter
- .CreateSubMonitor(monitor, 80));
- exporter.setCdmAppController(applicationConfiguration);
- monitor.worked(10);
-
- try {
- exporter.invoke(configurator);
- monitor.worked(60);
- } catch (RuntimeException e) {
- MessagingUtils.messageDialog("Error exporting data", this,
- "An error occured while"
- + "exporting to destination '"
- + configurator.getDestinationNameString()
- + "'.\n"
- + "Please check error log for details.", e);
- }
-
- display.asyncExec(new Runnable() {
-
- @Override
- public void run() {
- IWorkbenchPart activePart = StoreUtil.getActivePage()
- .getActivePart();
- if (activePart instanceof IConversationEnabled) {
- // terminate any open transactions
- IConversationEnabled conversationEnabled = (IConversationEnabled) activePart;
- // restarting transaction and committing it to
- // trigger
- // change listener
- // TODO verify correct behaviour
-
- try{
- conversationEnabled.getConversationHolder()
- .startTransaction();
-
- conversationEnabled.getConversationHolder()
- .commit();
- }catch(RuntimeException e){
- MessagingUtils.messageDialog("Error starting conversation handling", this, "" +
- "Conversation Error: "+ e);
- }
- }
- }
- });
- monitor.worked(10);
-
- return Status.OK_STATUS;
- }
- };
-
- return job;
- }
-
public Job createIOServiceJob(final IExportConfigurator configurator, final File exportFile) {
Assert.isNotNull(configurator, "Configuration may not be null");
- // final Display display = Display.getCurrent();
+ final Display display = Display.getCurrent();
Job job = new Job("Export: " + configurator.getClass().getSimpleName()) { //$NON-NLS-1$
@Override
protected IStatus run(IProgressMonitor monitor) {
- monitor.beginTask("Exporting database. This will take some time.", IProgressMonitor.UNKNOWN);
+ SubMonitor subMonitor = SubMonitor.convert(monitor, 100);
+ subMonitor.beginTask("Exporting database. This will take some time.", IProgressMonitor.UNKNOWN);
try {
IIOService ioService = CdmApplicationState.getIOService();
-
- ExportResult result = ioService.export(configurator);
- ExportDataWrapper data = result.getExportData();
+ UUID uuid = ioService.monitExportData(configurator);
+ IRemotingProgressMonitor remotingMonitor;
+ List feedBackGeneratorList = new ArrayList<>();
+ try {
+ remotingMonitor = CdmStore.getProgressMonitorClientManager().pollMonitor("Export Data",
+ uuid,
+ 1000,
+ ExportManager.this,
+ feedBackGeneratorList,
+ subMonitor);
+
+ } catch (Exception ex) {
+ return new Status(IStatus.ERROR, TaxeditorStorePlugin.PLUGIN_ID, "Operation Interrupted", ex);
+ }
+
+ ExportResult result = (ExportResult)remotingMonitor.getResult();
+ ExportDataWrapper data = result.getExportData();
try{
- byte[] exportData = (byte[])data.getExportData();
- if(exportData != null){
- FileOutputStream stream = new FileOutputStream(exportFile);
- stream.write(exportData);
- stream.close();
- }
+ if (result.getExportData().getType().equals(ExportResultType.BYTE_ARRAY) || result.getExportData().getType().equals(ExportResultType.LIST_BYTE_ARRAY)){
+ if (data.getExportData() instanceof byte[]){
+ byte[] exportData = (byte[])data.getExportData();
+ if(exportData != null){
+ FileOutputStream stream = new FileOutputStream(exportFile);
+ Writer out = new BufferedWriter(new OutputStreamWriter(
+ stream, "UTF8"));
+
+ stream.write(exportData);
+ out.flush();
+ stream.close();
+ }
+ }else if (data.getExportData() instanceof List){
+ //TODO:This needs to be improved
+ @SuppressWarnings("unchecked")
+ List exportData = (List)data.getExportData();
+ if(exportData != null){
+ FileOutputStream stream = new FileOutputStream(exportFile);
+ Writer out = new BufferedWriter(new OutputStreamWriter(
+ stream, "UTF8"));
+
+ stream.write(exportData.get(0));
+ out.flush();
+ stream.close();
+ }
+ }
+
+ } else if (result.getExportData().getType().equals(ExportResultType.MAP_BYTE_ARRAY)){
+ @SuppressWarnings("unchecked")
+ Map resultMap = (Map)data.getExportData();
+ Set keySet = resultMap.keySet();
+ String fileEnding = ".zip";
+ if (configurator instanceof DwcaTaxExportConfigurator){
+ DwcaTaxExportConfigurator dwcaConfig = (DwcaTaxExportConfigurator)configurator;
+
+ File file = new File(dwcaConfig.getDestination().toURI());
+ FileOutputStream stream = new FileOutputStream(file);
+ ZipOutputStream zos = new ZipOutputStream(stream);
+ for (String key: keySet){
+ byte[] fileData = resultMap.get(key);
+ ZipEntry entry = new ZipEntry( key + fileEnding);
+ zos.putNextEntry(entry);
+ zos.write(fileData);
+ zos.closeEntry();
+ }
+ zos.close();
+ }
+ } else{
+ logger.error("This kind of result data is not supported yet." + result.getExportData().getType().toString());
+ }
+
} catch(Exception e){
logger.error(e.getStackTrace());
}
-
+ showResult(configurator.getClass().getSimpleName(), display, result, successMessage);
} catch (Exception e) {
@@ -204,10 +181,7 @@ public class ExportManager extends AbstractIOManager {
};
return job;
}
- /**
- * @param jaxb
- * @return
- */
+
private IIoConfigurator getConfigurator(TYPE type) {
Assert.isNotNull(type, "Type should not be null");
@@ -222,29 +196,144 @@ public class ExportManager extends AbstractIOManager {
}
}
- /**
- *
- * JaxbConfigurator
- *
- *
- * @return a {@link eu.etaxonomy.cdm.io.jaxb.JaxbExportConfigurator} object.
- */
public final JaxbExportConfigurator JaxbConfigurator() {
return (JaxbExportConfigurator) getConfigurator(TYPE.Jaxb);
}
- /**
- *
- * SddConfigurator
- *
- *
- * @return a {@link eu.etaxonomy.cdm.io.sdd.out.SDDExportConfigurator}
- * object.
- */
public final SDDExportConfigurator SddConfigurator() {
return (SDDExportConfigurator) getConfigurator(TYPE.Sdd);
}
+ public Job createIOServiceJob(CdmLightExportConfigurator configurator, String urlString) {
+ Assert.isNotNull(configurator, "Configuration may not be null");
+ final Display display = Display.getDefault();
+
+ Job job = new Job("Export: " + configurator.getClass().getSimpleName()) { //$NON-NLS-1$
+ @Override
+ protected IStatus run(IProgressMonitor monitor) {
+ monitor.beginTask("Exporting database. This will take some time.", IProgressMonitor.UNKNOWN);
+ try {
+ IIOService ioService = CdmApplicationState.getIOService();
+ monitor.beginTask(
+ "Exporting database. This will take some time.", 100);
+ monitor.worked(10);
+ configurator.setProgressMonitor(CdmProgressMonitorAdapter
+ .CreateSubMonitor(monitor, 80));
+ ExportResult result = ioService.export(configurator);
+ ExportDataWrapper data = result.getExportData();
+ try{
+ if (result.getExportData().getType().equals(ExportResultType.BYTE_ARRAY) || result.getExportData().getType().equals(ExportResultType.LIST_BYTE_ARRAY)){
+ byte[] exportData = (byte[])data.getExportData();
+ if(exportData != null){
+ File file = new File(urlString);
+ FileOutputStream stream = new FileOutputStream(file);
+ Writer out = new BufferedWriter(new OutputStreamWriter(
+ stream, "UTF8"));
+
+ stream.write(exportData);
+ out.flush();
+ stream.close();
+ }
+ } else if (result.getExportData().getType().equals(ExportResultType.MAP_BYTE_ARRAY)){
+ @SuppressWarnings("unchecked")
+ Map resultMap = (Map)data.getExportData();
+ Set keySet = resultMap.keySet();
+ SimpleDateFormat sdf = new SimpleDateFormat(DATE_FORMAT_NOW);
+ Calendar cal = Calendar.getInstance();
+ String fileEnding = ".csv";
+
+ if (configurator.isCreateZipFile()){
+ File file = new File(urlString+File.separator + "csv_light_" + sdf.format(cal.getTime())+ ".zip");
+ FileOutputStream stream = new FileOutputStream(file);
+ ZipOutputStream zos = new ZipOutputStream(stream);
+ for (String key: keySet){
+ byte[] fileData = resultMap.get(key);
+ ZipEntry entry = new ZipEntry( key + fileEnding);
+ zos.putNextEntry(entry);
+ zos.write(fileData);
+ zos.closeEntry();
+ }
+ zos.close();
+ }else{
+ for (String key: keySet){
+ byte[] fileData = resultMap.get(key);
+ File file = new File(urlString+File.separator + key + fileEnding);
+ FileOutputStream stream = new FileOutputStream(file);
+ Writer out = new BufferedWriter(new OutputStreamWriter(
+ stream, "UTF8"));
+ stream.write(fileData);
+ out.flush();
+ stream.close();
+
+ }
+ }
+ }else{
+ logger.error("This kind of result data is not supported yet." + result.getExportData().getType().toString());
+ }
+ } catch(Exception e){
+ logger.error(e.getStackTrace());
+ }
+ showResult(configurator.getClass().getSimpleName(), display, result, successMessage);
+
+
+ } catch (Exception e) {
+ MessagingUtils.errorDialog("Error exporting data",
+ this,
+ e.getMessage(),
+ TaxeditorStorePlugin.PLUGIN_ID,
+ e,
+ true);
+ }
+
+ return Status.OK_STATUS;
+ }
+ };
+ return job;
+ }
+
+ public void runMoniteredOperation(final IExportConfigurator configurator, String urlString) {
+ IIOService ioService = CdmApplicationState.getIOService();
+ final UUID uuid = ioService.monitExportData(configurator);
+
+ Display.getDefault().asyncExec(new Runnable() {
+ @Override
+ public void run() {
+ boolean isZip = false;
+ String urlAddition = "";
+ if (configurator instanceof CdmLightExportConfigurator
+ || configurator instanceof ColDpExportConfigurator
+ || configurator instanceof WfoBackboneExportConfigurator){
+
+ if (configurator instanceof CdmLightExportConfigurator) {
+ isZip = ((CdmLightExportConfigurator)configurator).isCreateZipFile();
+ }else if (configurator instanceof ColDpExportConfigurator){
+ isZip = ((ColDpExportConfigurator)configurator).isCreateZipFile();
+ }else if (configurator instanceof WfoBackboneExportConfigurator){
+ isZip = ((WfoBackboneExportConfigurator)configurator).isCreateZipFile();
+ if (isZip) {
+ SimpleDateFormat sdf = new SimpleDateFormat(DATE_FORMAT_NOW);
+ Calendar cal = Calendar.getInstance();
+ urlAddition = File.separator + ((WfoBackboneExportConfigurator)configurator).getFamilyStr() + "_WFO_" + sdf.format(cal.getTime());
+ }
+ }
+ }
+ AbstractUtility.executeMoniteredExport(
+ configurator.getUserFriendlyIOName() != null? configurator.getUserFriendlyIOName(): "Export",
+ uuid,
+ 1000,
+ true,
+ ExportManager.this,
+ null,
+ urlString+urlAddition,
+ isZip);
+ }
+ });
+ }
-
-}
+ @Override
+ public void postOperation(IRemotingProgressMonitor monitor) {
+ Display.getDefault().asyncExec(()-> {
+ CdmStore.getContextManager().notifyContextRefresh();
+ });
+ }
+}
\ No newline at end of file