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Fixed Bug #4531
[taxeditor.git] / .gitattributes
diff --git a/.gitattributes b/.gitattributes
index 27491be824972b6cf0ecb342105f03a1ca3860a8..ea7f63847a4416d6cdb79c86132524de76fc3801 100644 (file)
--- a/.gitattributes
+++ b/.gitattributes
@@ -13,6 +13,7 @@ eu.etaxonomy.taxeditor.application/icons/256color_16x16.gif -text
 eu.etaxonomy.taxeditor.application/icons/256color_32x32.gif -text
 eu.etaxonomy.taxeditor.application/icons/256color_48x48.gif -text
 eu.etaxonomy.taxeditor.application/icons/256color_48x48.ico -text
+eu.etaxonomy.taxeditor.application/icons/check.png -text
 eu.etaxonomy.taxeditor.application/icons/edit_16x16.gif -text
 eu.etaxonomy.taxeditor.application/icons/specimen_derivate-16x16-32.png -text
 eu.etaxonomy.taxeditor.application/plugin.xml -text
@@ -31,6 +32,7 @@ eu.etaxonomy.taxeditor.application/src/main/java/eu/etaxonomy/taxeditor/SaveAllH
 eu.etaxonomy.taxeditor.application/src/main/java/eu/etaxonomy/taxeditor/SaveHandler.java -text
 eu.etaxonomy.taxeditor.application/src/main/java/eu/etaxonomy/taxeditor/TaxonomicEditorPlugin.java -text
 eu.etaxonomy.taxeditor.application/src/main/java/eu/etaxonomy/taxeditor/perspective/BulkEditing.java -text
+eu.etaxonomy.taxeditor.application/src/main/java/eu/etaxonomy/taxeditor/perspective/ChecklistPerspective.java -text
 eu.etaxonomy.taxeditor.application/src/main/java/eu/etaxonomy/taxeditor/perspective/Default.java -text
 eu.etaxonomy.taxeditor.application/src/main/java/eu/etaxonomy/taxeditor/perspective/DerivatePerspective.java -text
 eu.etaxonomy.taxeditor.application/src/main/java/eu/etaxonomy/taxeditor/perspective/PolytomousKey.java -text
@@ -222,8 +224,8 @@ eu.etaxonomy.taxeditor.cdmlib/lib/jboss-logging-3.1.3.GA.jar -text
 eu.etaxonomy.taxeditor.cdmlib/lib/jboss-transaction-api_1.1_spec-1.0.0.Final.jar -text
 eu.etaxonomy.taxeditor.cdmlib/lib/jdbc4-2.0.jar -text
 eu.etaxonomy.taxeditor.cdmlib/lib/jdom-1.1.3.jar -text
-eu.etaxonomy.taxeditor.cdmlib/lib/jena-core-2.12.1-SNAPSHOT.jar -text
-eu.etaxonomy.taxeditor.cdmlib/lib/jena-iri-1.1.1-SNAPSHOT.jar -text
+eu.etaxonomy.taxeditor.cdmlib/lib/jena-core-2.11.2.jar -text
+eu.etaxonomy.taxeditor.cdmlib/lib/jena-iri-1.0.2.jar -text
 eu.etaxonomy.taxeditor.cdmlib/lib/joda-time-2.1.jar -text
 eu.etaxonomy.taxeditor.cdmlib/lib/json-lib-2.4-jdk15.jar -text
 eu.etaxonomy.taxeditor.cdmlib/lib/jsr250-api-1.0.jar -text
@@ -353,6 +355,7 @@ eu.etaxonomy.taxeditor.editor/OSGI-INF/l10n/plugin_en.properties -text
 eu.etaxonomy.taxeditor.editor/build.properties -text
 eu.etaxonomy.taxeditor.editor/icons/address-book-new.png -text
 eu.etaxonomy.taxeditor.editor/icons/camera-photo.png -text
+eu.etaxonomy.taxeditor.editor/icons/check.png -text
 eu.etaxonomy.taxeditor.editor/icons/derivate_view-16x16-32.png -text
 eu.etaxonomy.taxeditor.editor/icons/edit_16x16.gif -text
 eu.etaxonomy.taxeditor.editor/icons/emblem-photos.png -text
@@ -536,6 +539,9 @@ eu.etaxonomy.taxeditor.editor/src/main/java/eu/etaxonomy/taxeditor/editor/view/d
 eu.etaxonomy.taxeditor.editor/src/main/java/eu/etaxonomy/taxeditor/editor/view/derivate/contextMenu/CreateDerivateContextMenu.java -text
 eu.etaxonomy.taxeditor.editor/src/main/java/eu/etaxonomy/taxeditor/editor/view/derivate/contextMenu/DerivateViewContextMenu.java -text
 eu.etaxonomy.taxeditor.editor/src/main/java/eu/etaxonomy/taxeditor/editor/view/derivate/contextMenu/SingleReadSequenceContextMenu.java -text
+eu.etaxonomy.taxeditor.editor/src/main/java/eu/etaxonomy/taxeditor/editor/view/derivate/handler/DeleteDerivateHandler.java -text
+eu.etaxonomy.taxeditor.editor/src/main/java/eu/etaxonomy/taxeditor/editor/view/derivate/operation/DeleteDerivateOperation.java -text
+eu.etaxonomy.taxeditor.editor/src/main/java/eu/etaxonomy/taxeditor/editor/view/derivate/operation/MoveDerivateOperation.java -text
 eu.etaxonomy.taxeditor.editor/src/main/java/eu/etaxonomy/taxeditor/editor/view/descriptive/DescriptionElementDragListener.java -text
 eu.etaxonomy.taxeditor.editor/src/main/java/eu/etaxonomy/taxeditor/editor/view/descriptive/DescriptionElementDropAdapter.java -text
 eu.etaxonomy.taxeditor.editor/src/main/java/eu/etaxonomy/taxeditor/editor/view/descriptive/DescriptionElementTransfer.java -text
@@ -608,10 +614,12 @@ eu.etaxonomy.taxeditor.editor/src/test/java/eu/etaxonomy/taxeditor/editor/name/o
 eu.etaxonomy.taxeditor.editor/src/test/java/eu/etaxonomy/taxeditor/editor/name/operation/MoveTaxonOperationTest.java -text
 eu.etaxonomy.taxeditor.editor/src/test/java/eu/etaxonomy/taxeditor/editor/name/operation/SwapSynonymAndAcceptedOperationTest.java -text
 eu.etaxonomy.taxeditor.feature.platform/.project -text
+eu.etaxonomy.taxeditor.feature.platform/LICENSE.TXT -text
 eu.etaxonomy.taxeditor.feature.platform/build.properties -text
 eu.etaxonomy.taxeditor.feature.platform/feature.xml -text
 eu.etaxonomy.taxeditor.feature.platform/pom.xml -text
 eu.etaxonomy.taxeditor.feature/.project -text
+eu.etaxonomy.taxeditor.feature/LICENSE.TXT -text
 eu.etaxonomy.taxeditor.feature/build.properties -text
 eu.etaxonomy.taxeditor.feature/feature.xml -text
 eu.etaxonomy.taxeditor.feature/pom.xml -text
@@ -904,6 +912,7 @@ eu.etaxonomy.taxeditor.navigation/OSGI-INF/l10n/messages.properties -text
 eu.etaxonomy.taxeditor.navigation/OSGI-INF/l10n/messages_de.properties -text
 eu.etaxonomy.taxeditor.navigation/OSGI-INF/l10n/messages_en.properties -text
 eu.etaxonomy.taxeditor.navigation/build.properties -text
+eu.etaxonomy.taxeditor.navigation/icons/check.png -text
 eu.etaxonomy.taxeditor.navigation/icons/edit_16x16.gif -text
 eu.etaxonomy.taxeditor.navigation/icons/preferences-system-windows.png -text
 eu.etaxonomy.taxeditor.navigation/icons/system-search.png -text
@@ -1000,50 +1009,6 @@ eu.etaxonomy.taxeditor.printpublisher/src/main/java/eu/etaxonomy/taxeditor/print
 eu.etaxonomy.taxeditor.printpublisher/src/main/java/eu/etaxonomy/taxeditor/printpublisher/wizard/SelectServiceWizardPage.java -text
 eu.etaxonomy.taxeditor.printpublisher/src/main/java/eu/etaxonomy/taxeditor/printpublisher/wizard/SelectStylesheetWizardPage.java -text
 eu.etaxonomy.taxeditor.printpublisher/src/main/java/eu/etaxonomy/taxeditor/printpublisher/wizard/SelectTaxaWizardPage.java -text
-eu.etaxonomy.taxeditor.remoting/.classpath -text
-eu.etaxonomy.taxeditor.remoting/.project -text
-eu.etaxonomy.taxeditor.remoting/.settings/org.eclipse.jdt.core.prefs -text
-eu.etaxonomy.taxeditor.remoting/.settings/org.eclipse.pde.core.prefs -text
-eu.etaxonomy.taxeditor.remoting/META-INF/MANIFEST.MF -text
-eu.etaxonomy.taxeditor.remoting/build.properties -text
-eu.etaxonomy.taxeditor.remoting/pom.xml -text
-eu.etaxonomy.taxeditor.remoting/src/main/java/eu/etaxonomy/cdm/api/application/CdmApplicationRemoteConfiguration.java -text
-eu.etaxonomy.taxeditor.remoting/src/main/java/eu/etaxonomy/cdm/api/application/CdmApplicationRemoteController.java -text
-eu.etaxonomy.taxeditor.remoting/src/main/java/eu/etaxonomy/cdm/api/cache/CdmServiceCacher.java -text
-eu.etaxonomy.taxeditor.remoting/src/main/java/eu/etaxonomy/cdm/remote/CdmPersistentRemoteSource.java -text
-eu.etaxonomy.taxeditor.remoting/src/main/java/eu/etaxonomy/cdm/remote/CdmRemoteSource.java -text
-eu.etaxonomy.taxeditor.remoting/src/main/java/eu/etaxonomy/cdm/remote/CdmRemoteSourceBase.java -text
-eu.etaxonomy.taxeditor.remoting/src/main/java/eu/etaxonomy/cdm/remote/CdmRemoteSourceException.java -text
-eu.etaxonomy.taxeditor.remoting/src/main/java/eu/etaxonomy/cdm/remote/ICdmRemoteSource.java -text
-eu.etaxonomy.taxeditor.remoting/src/main/java/eu/etaxonomy/taxeditor/remoting/RemotingTestPluginActivator.java -text
-eu.etaxonomy.taxeditor.remoting/src/main/java/org/hibernate/collection/internal/AbstractPersistentCollection.java -text
-eu.etaxonomy.taxeditor.remoting/src/main/java/org/hibernate/proxy/AbstractLazyInitializer.java -text
-eu.etaxonomy.taxeditor.remoting/src/main/resources/etc/jetty/jetty-runner-9.2.3.v20140905.jar -text
-eu.etaxonomy.taxeditor.remoting/src/main/resources/etc/jetty/start-9.2.3.v20140905.jar -text
-eu.etaxonomy.taxeditor.remoting/src/main/resources/eu/etaxonomy/cdm/config.properties -text
-eu.etaxonomy.taxeditor.remoting/src/main/resources/eu/etaxonomy/cdm/httpInvokerServiceClients.xml -text
-eu.etaxonomy.taxeditor.remoting/src/main/resources/eu/etaxonomy/cdm/localApplicationContext.xml -text
-eu.etaxonomy.taxeditor.remoting/src/main/resources/eu/etaxonomy/cdm/remotingApplicationContext.xml -text
-eu.etaxonomy.taxeditor.remoting/src/main/resources/eu/etaxonomy/cdm/remoting_persistence_security.xml -text
-eu.etaxonomy.taxeditor.remoting/src/main/resources/eu/etaxonomy/cdm/remoting_services_security.xml -text
-eu.etaxonomy.taxeditor.remoting/src/test/java/eu/etaxonomy/taxeditor/exception/CDMServerException.java -text
-eu.etaxonomy.taxeditor.remoting/src/test/java/eu/etaxonomy/taxeditor/httpinvoker/BaseRemotingTest.java -text
-eu.etaxonomy.taxeditor.remoting/src/test/java/eu/etaxonomy/taxeditor/httpinvoker/CDMServer.java -text
-eu.etaxonomy.taxeditor.remoting/src/test/java/eu/etaxonomy/taxeditor/httpinvoker/CdmPersistentRemoteSourceTest.java -text
-eu.etaxonomy.taxeditor.remoting/src/test/java/eu/etaxonomy/taxeditor/httpinvoker/CdmRemoteSourceTest.java -text
-eu.etaxonomy.taxeditor.remoting/src/test/java/eu/etaxonomy/taxeditor/httpinvoker/CdmServerTest.java -text
-eu.etaxonomy.taxeditor.remoting/src/test/java/eu/etaxonomy/taxeditor/httpinvoker/HttpInvokerServicesTest.java -text
-eu.etaxonomy.taxeditor.remoting/src/test/java/eu/etaxonomy/taxeditor/lazyloading/AbstractLazyInitializerTest.java -text
-eu.etaxonomy.taxeditor.remoting/src/test/java/eu/etaxonomy/taxeditor/lazyloading/CdmServiceCacherTest.java -text
-eu.etaxonomy.taxeditor.remoting/src/test/java/eu/etaxonomy/taxeditor/lazyloading/RemoteLazyLoadingTest.java -text
-eu.etaxonomy.taxeditor.remoting/src/test/java/eu/etaxonomy/taxeditor/lazyloading/RemotePersistentCollectionTest.java -text
-eu.etaxonomy.taxeditor.remoting/src/test/resources/datasources.xml -text
-eu.etaxonomy.taxeditor.remoting/src/test/resources/eu/etaxonomy/cdm/cdm.datasources.xml -text
-eu.etaxonomy.taxeditor.remoting/src/test/resources/eu/etaxonomy/cdm/testRemotingApplicationContext.xml -text
-eu.etaxonomy.taxeditor.remoting/src/test/resources/eu/etaxonomy/taxeditor/lazyloading/AbstractLazyInitializerTest.xml -text
-eu.etaxonomy.taxeditor.remoting/src/test/resources/h2/cdmTest.h2.db -text
-eu.etaxonomy.taxeditor.remoting/src/test/resources/h2/cdmTest.trace.db -text
-eu.etaxonomy.taxeditor.remoting/src/test/resources/unitils.properties -text
 eu.etaxonomy.taxeditor.store/.classpath -text
 eu.etaxonomy.taxeditor.store/.project -text
 eu.etaxonomy.taxeditor.store/META-INF/MANIFEST.MF -text
@@ -1268,6 +1233,7 @@ eu.etaxonomy.taxeditor.store/src/main/java/eu/etaxonomy/taxeditor/io/wizard/Abst
 eu.etaxonomy.taxeditor.store/src/main/java/eu/etaxonomy/taxeditor/io/wizard/AbstractExcelImportWizard.java -text
 eu.etaxonomy.taxeditor.store/src/main/java/eu/etaxonomy/taxeditor/io/wizard/AbstractExportWizard.java -text
 eu.etaxonomy.taxeditor.store/src/main/java/eu/etaxonomy/taxeditor/io/wizard/AbstractImportWizard.java -text
+eu.etaxonomy.taxeditor.store/src/main/java/eu/etaxonomy/taxeditor/io/wizard/CsvExportWizard.java -text
 eu.etaxonomy.taxeditor.store/src/main/java/eu/etaxonomy/taxeditor/io/wizard/DarwinCoreArchiveExportWizard.java -text
 eu.etaxonomy.taxeditor.store/src/main/java/eu/etaxonomy/taxeditor/io/wizard/EndnoteImportWizard.java -text
 eu.etaxonomy.taxeditor.store/src/main/java/eu/etaxonomy/taxeditor/io/wizard/ExcelNormalExplicitTaxaImportWizard.java -text
@@ -1303,7 +1269,7 @@ eu.etaxonomy.taxeditor.store/src/main/java/eu/etaxonomy/taxeditor/model/FeatureN
 eu.etaxonomy.taxeditor.store/src/main/java/eu/etaxonomy/taxeditor/model/ICdmEditorHandle.java -text
 eu.etaxonomy.taxeditor.store/src/main/java/eu/etaxonomy/taxeditor/model/IContextListener.java -text
 eu.etaxonomy.taxeditor.store/src/main/java/eu/etaxonomy/taxeditor/model/IDataChangeBehavior.java -text
-eu.etaxonomy.taxeditor.store/src/main/java/eu/etaxonomy/taxeditor/model/IDirtyMarkableSelectionProvider.java -text
+eu.etaxonomy.taxeditor.store/src/main/java/eu/etaxonomy/taxeditor/model/IDirtyMarkable.java -text
 eu.etaxonomy.taxeditor.store/src/main/java/eu/etaxonomy/taxeditor/model/IElementHasDetails.java -text
 eu.etaxonomy.taxeditor.store/src/main/java/eu/etaxonomy/taxeditor/model/IPartChangeListener.java -text
 eu.etaxonomy.taxeditor.store/src/main/java/eu/etaxonomy/taxeditor/model/IPartContentHasDetails.java -text
@@ -1673,6 +1639,7 @@ eu.etaxonomy.taxeditor.store/src/main/java/eu/etaxonomy/taxeditor/ui/section/occ
 eu.etaxonomy.taxeditor.store/src/main/java/eu/etaxonomy/taxeditor/ui/section/occurrence/derivedUnit/PreservedSpecimenGeneralDetailElement.java -text
 eu.etaxonomy.taxeditor.store/src/main/java/eu/etaxonomy/taxeditor/ui/section/occurrence/derivedUnit/PreservedSpecimenGeneralDetailSection.java -text
 eu.etaxonomy.taxeditor.store/src/main/java/eu/etaxonomy/taxeditor/ui/section/occurrence/derivedUnit/PreservedSpecimenSourceCollectionDetailSection.java -text
+eu.etaxonomy.taxeditor.store/src/main/java/eu/etaxonomy/taxeditor/ui/section/occurrence/dna/AbstractSampleDesignationDetailSection.java -text
 eu.etaxonomy.taxeditor.store/src/main/java/eu/etaxonomy/taxeditor/ui/section/occurrence/dna/AbstractUnboundEntityCollectionSection.java -text
 eu.etaxonomy.taxeditor.store/src/main/java/eu/etaxonomy/taxeditor/ui/section/occurrence/dna/AmplificationCloningDetailElement.java -text
 eu.etaxonomy.taxeditor.store/src/main/java/eu/etaxonomy/taxeditor/ui/section/occurrence/dna/AmplificationCloningDetailSection.java -text
@@ -1682,11 +1649,16 @@ eu.etaxonomy.taxeditor.store/src/main/java/eu/etaxonomy/taxeditor/ui/section/occ
 eu.etaxonomy.taxeditor.store/src/main/java/eu/etaxonomy/taxeditor/ui/section/occurrence/dna/AmplificationGeneralDetailSection.java -text
 eu.etaxonomy.taxeditor.store/src/main/java/eu/etaxonomy/taxeditor/ui/section/occurrence/dna/AmplificationPrimerDetailElement.java -text
 eu.etaxonomy.taxeditor.store/src/main/java/eu/etaxonomy/taxeditor/ui/section/occurrence/dna/AmplificationPrimerDetailSection.java -text
+eu.etaxonomy.taxeditor.store/src/main/java/eu/etaxonomy/taxeditor/ui/section/occurrence/dna/CurrentSampleDesignationDetailSection.java -text
 eu.etaxonomy.taxeditor.store/src/main/java/eu/etaxonomy/taxeditor/ui/section/occurrence/dna/DnaQualityDetailElement.java -text
 eu.etaxonomy.taxeditor.store/src/main/java/eu/etaxonomy/taxeditor/ui/section/occurrence/dna/DnaQualityDetailSection.java -text
 eu.etaxonomy.taxeditor.store/src/main/java/eu/etaxonomy/taxeditor/ui/section/occurrence/dna/DnaSampleGeneralDetailElement.java -text
 eu.etaxonomy.taxeditor.store/src/main/java/eu/etaxonomy/taxeditor/ui/section/occurrence/dna/DnaSampleGeneralDetailSection.java -text
 eu.etaxonomy.taxeditor.store/src/main/java/eu/etaxonomy/taxeditor/ui/section/occurrence/dna/PrimerGeneralDetailElement.java -text
+eu.etaxonomy.taxeditor.store/src/main/java/eu/etaxonomy/taxeditor/ui/section/occurrence/dna/SampleDesignationDetailElement.java -text
+eu.etaxonomy.taxeditor.store/src/main/java/eu/etaxonomy/taxeditor/ui/section/occurrence/dna/SampleDesignationDetailSection.java -text
+eu.etaxonomy.taxeditor.store/src/main/java/eu/etaxonomy/taxeditor/ui/section/occurrence/dna/SampleDesignationHistoryDetailSection.java -text
+eu.etaxonomy.taxeditor.store/src/main/java/eu/etaxonomy/taxeditor/ui/section/occurrence/dna/SampleDesignationTextDetailElement.java -text
 eu.etaxonomy.taxeditor.store/src/main/java/eu/etaxonomy/taxeditor/ui/section/occurrence/dna/SequenceContigFileCollectionDetailSection.java -text
 eu.etaxonomy.taxeditor.store/src/main/java/eu/etaxonomy/taxeditor/ui/section/occurrence/dna/SequenceGeneralDetailElement.java -text
 eu.etaxonomy.taxeditor.store/src/main/java/eu/etaxonomy/taxeditor/ui/section/occurrence/dna/SequenceGeneralDetailSection.java -text
@@ -1697,12 +1669,8 @@ eu.etaxonomy.taxeditor.store/src/main/java/eu/etaxonomy/taxeditor/ui/section/occ
 eu.etaxonomy.taxeditor.store/src/main/java/eu/etaxonomy/taxeditor/ui/section/occurrence/dna/SingleReadPherogramCollectionDetailSection.java -text
 eu.etaxonomy.taxeditor.store/src/main/java/eu/etaxonomy/taxeditor/ui/section/occurrence/dna/TissueSampleGeneralDetailElement.java -text
 eu.etaxonomy.taxeditor.store/src/main/java/eu/etaxonomy/taxeditor/ui/section/occurrence/dna/TissueSampleGeneralDetailSection.java -text
-eu.etaxonomy.taxeditor.store/src/main/java/eu/etaxonomy/taxeditor/ui/section/occurrence/media/LivingPlantPhotoGeneralDetailElement.java -text
-eu.etaxonomy.taxeditor.store/src/main/java/eu/etaxonomy/taxeditor/ui/section/occurrence/media/LivingPlantPhotoGeneralDetailSection.java -text
 eu.etaxonomy.taxeditor.store/src/main/java/eu/etaxonomy/taxeditor/ui/section/occurrence/media/MediaSpecimenGeneralDetailElement.java -text
 eu.etaxonomy.taxeditor.store/src/main/java/eu/etaxonomy/taxeditor/ui/section/occurrence/media/MediaSpecimenGeneralDetailSection.java -text
-eu.etaxonomy.taxeditor.store/src/main/java/eu/etaxonomy/taxeditor/ui/section/occurrence/media/SpecimenScanGeneralDetailElement.java -text
-eu.etaxonomy.taxeditor.store/src/main/java/eu/etaxonomy/taxeditor/ui/section/occurrence/media/SpecimenScanGeneralDetailSection.java -text
 eu.etaxonomy.taxeditor.store/src/main/java/eu/etaxonomy/taxeditor/ui/section/reference/NomenclaturalReferenceDetailElement.java -text
 eu.etaxonomy.taxeditor.store/src/main/java/eu/etaxonomy/taxeditor/ui/section/reference/NomenclaturalReferenceDetailSection.java -text
 eu.etaxonomy.taxeditor.store/src/main/java/eu/etaxonomy/taxeditor/ui/section/reference/ReferenceDetailElement.java -text