ref #9114 adapt some classes with URI to wrapper in taxeditor (cont.)

[taxeditor.git] / eu.etaxonomy.taxeditor.molecular / src / main / java / eu / etaxonomy / taxeditor / molecular / editor / e4 / AlignmentEditorE4.java

diff --git a/eu.etaxonomy.taxeditor.molecular/src/main/java/eu/etaxonomy/taxeditor/molecular/editor/e4/AlignmentEditorE4.java b/eu.etaxonomy.taxeditor.molecular/src/main/java/eu/etaxonomy/taxeditor/molecular/editor/e4/AlignmentEditorE4.java
index 55fa18e2aaeab0452862ed3a55175d7c4c8ccaee..2678778cc9736c0e6d0c426026b2fb479345fda0 100644 (file)
--- a/eu.etaxonomy.taxeditor.molecular/src/main/java/eu/etaxonomy/taxeditor/molecular/editor/e4/AlignmentEditorE4.java
+++ b/eu.etaxonomy.taxeditor.molecular/src/main/java/eu/etaxonomy/taxeditor/molecular/editor/e4/AlignmentEditorE4.java
@@ -11,7 +11,7 @@ package eu.etaxonomy.taxeditor.molecular.editor.e4;
 import java.io.File;
 import java.io.IOException;
 import java.io.InputStream;
-import java.net.URI;
+
 import java.util.ArrayList;
 import java.util.Collection;
 import java.util.Collections;
@@ -40,6 +40,7 @@ import org.eclipse.ui.commands.ICommandService;
 
 import eu.etaxonomy.cdm.api.conversation.ConversationHolder;
 import eu.etaxonomy.cdm.api.service.molecular.ISequenceService;
+import eu.etaxonomy.cdm.common.URI;
 import eu.etaxonomy.cdm.model.media.MediaUtils;
 import eu.etaxonomy.cdm.model.molecular.Sequence;
 import eu.etaxonomy.cdm.model.molecular.SequenceString;
@@ -306,9 +307,9 @@ public class AlignmentEditorE4 {
     private void createTestContents() {
                // Just for testing:
                try {
-                       addRead(new File("D:/Users/BenStoever/ownCloud/Dokumente/Projekte/EDITor/Quelltexte/LibrAlign branch/Repository/eu.etaxonomy.taxeditor.editor/src/main/resources/AlignmentTestData/JR430_JR-P01.ab1").toURI(), false); //$NON-NLS-1$
-            //addRead(new File("D:/Users/BenStoever/ownCloud/Dokumente/Projekte/EDITor/Quelltexte/LibrAlign branch/Repository/eu.etaxonomy.taxeditor.editor/src/main/resources/AlignmentTestData/JR444_JR-P05.ab1").toURI(), false);
-            addRead(new File("D:/Users/BenStoever/ownCloud/Dokumente/Projekte/EDITor/Quelltexte/LibrAlign branch/Repository/eu.etaxonomy.taxeditor.editor/src/main/resources/AlignmentTestData/Test_qualityScore.scf").toURI(), false); //$NON-NLS-1$
+                       addRead(URI.fromFile(new File("D:/Users/BenStoever/ownCloud/Dokumente/Projekte/EDITor/Quelltexte/LibrAlign branch/Repository/eu.etaxonomy.taxeditor.editor/src/main/resources/AlignmentTestData/JR430_JR-P01.ab1")), false); //$NON-NLS-1$
+            //addRead(URI.fromFile(new File("D:/Users/BenStoever/ownCloud/Dokumente/Projekte/EDITor/Quelltexte/LibrAlign branch/Repository/eu.etaxonomy.taxeditor.editor/src/main/resources/AlignmentTestData/JR444_JR-P05.ab1")), false);
+            addRead(URI.fromFile(new File("D:/Users/BenStoever/ownCloud/Dokumente/Projekte/EDITor/Quelltexte/LibrAlign branch/Repository/eu.etaxonomy.taxeditor.editor/src/main/resources/AlignmentTestData/Test_qualityScore.scf")), false); //$NON-NLS-1$
 
                        // Add test consensus sequence:
                        AlignmentModel consensusModel = getEditableConsensusArea().getAlignmentModel();