/**
-* Copyright (C) 2007 EDIT
-* European Distributed Institute of Taxonomy
-* http://www.e-taxonomy.eu
-*
-* The contents of this file are subject to the Mozilla Public License Version 1.1
-* See LICENSE.TXT at the top of this package for the full license terms.
-*/
+ * Copyright (C) 2007 EDIT
+ * European Distributed Institute of Taxonomy
+ * http://www.e-taxonomy.eu
+ *
+ * The contents of this file are subject to the Mozilla Public License Version 1.1
+ * See LICENSE.TXT at the top of this package for the full license terms.
+ */
package eu.etaxonomy.taxeditor.editor;
+import java.util.Arrays;
import java.util.HashSet;
+import java.util.List;
import java.util.Set;
import java.util.UUID;
* @created 19.03.2009
* @version 1.0
*/
-public class TaxonEditorInput implements IEditorInput, IConversationEnabled, IPersistableElement {
+public class TaxonEditorInput extends CdmEntitySessionInput implements IEditorInput, IConversationEnabled, IPersistableElement {
- private final ConversationHolder conversation;
+ private final ConversationHolder conversation;
- private final TaxonNode taxonNode;
+ private TaxonNode taxonNode;
- private TaxonEditorInputDataChangeBehaviour dataChangeBehavior;
+ private TaxonEditorInputDataChangeBehaviour dataChangeBehavior;
- private TaxonBase initiallySelectedTaxonBase;
+ private TaxonBase initiallySelectedTaxonBase;
- private TaxonEditorInput(TaxonNode taxonNode, ConversationHolder conversation){
- this.conversation = conversation;
- this.taxonNode = taxonNode;
- }
+ private final ITaxonNodeService service;
+ private enum CdmType {
+ TAXON_NODE,
+ TAXON_BASE,
+ PARENT_TAXON_NODE
+ }
+ private TaxonEditorInput(UUID uuid, CdmType type) {
+ this.conversation = CdmStore.createConversation();
+ service = CdmStore.getService(ITaxonNodeService.class);
+ switch(type) {
+ case PARENT_TAXON_NODE:
+ initForParentTaxonNode(uuid);
+ break;
+ case TAXON_BASE:
+ initForTaxonBase(uuid);
+ break;
+ case TAXON_NODE:
+ initForTaxonNode(uuid);
+ break;
+ }
+ }
+
+ private void init(TaxonNode taxonNode) {
+ this.taxonNode = taxonNode;
+ }
- /**
- * <p>NewInstance</p>
- *
- * @param taxonNodeUuid a {@link java.util.UUID} object.
- * @return a {@link eu.etaxonomy.taxeditor.editor.TaxonEditorInput} object.
- * @throws java.lang.Exception if any.
- */
- public static TaxonEditorInput NewInstance(UUID taxonNodeUuid) throws Exception{
- try{
- ConversationHolder conversation = CdmStore.createConversation();
- return NewInstance(taxonNodeUuid, conversation);
- }catch(Exception e){
- throw e;
- }
- }
/**
+ * <p>NewInstance</p>
*
- * @param taxonNodeUuid
- * @param conversation
- * @return
+ * @param taxonNodeUuid a {@link java.util.UUID} object.
+ * @return a {@link eu.etaxonomy.taxeditor.editor.TaxonEditorInput} object.
+ * @throws java.lang.Exception if any.
*/
- private static TaxonEditorInput NewInstance(UUID taxonNodeUuid, ConversationHolder conversation){
+ private void initForTaxonNode(UUID taxonNodeUuid) {
+
+ TaxonNode taxonNode = getCdmEntitySession().remoteLoad(service,taxonNodeUuid, null);
+
+ if(taxonNode == null){
+ MessagingUtils.warningDialog("Not yet implemented", TaxonEditorInput.class, "Selected element is not type TaxonBase.");
+ }
+ init(taxonNode);
- TaxonNode taxonNode = CdmStore.getService(ITaxonNodeService.class).load(taxonNodeUuid, null);
if(taxonNode == null){
MessagingUtils.warningDialog("Not yet implemented", TaxonEditorInput.class, "Selected element is not of type TaxonNode but [null].");
return null;
}
+ }
- return new TaxonEditorInput(taxonNode, conversation);
+ private void initForTaxonBase(UUID taxonBaseUuid) {
+
+ TaxonBase taxonBase = getCdmEntitySession().remoteLoad(CdmStore.getService(ITaxonService.class),taxonBaseUuid);
+ if (taxonBase != null){
+ if(taxonBase.isInstanceOf(Taxon.class)){
+ Taxon taxon = CdmBase.deproxy(taxonBase, Taxon.class);
+
+ if (taxon.getTaxonNodes().size() == 0 && taxon.isMisapplication()){
+ // TODO get accepted taxon
+ MessagingUtils.info("trying to open Mispplied Name ");
+
+ Set<Taxon> acceptedTaxa = new HashSet<Taxon>();
+ Set<TaxonRelationship> relations = taxon.getRelationsFromThisTaxon();
+ for(TaxonRelationship relation : relations){
+ if(relation.getType().equals(TaxonRelationshipType.MISAPPLIED_NAME_FOR())){
+ acceptedTaxa.add(relation.getToTaxon());
+ }
+ }
+ setInputForMultipleTaxa(conversation, acceptedTaxa);
+
+ }else{
+ setInputForMultipleNodes(conversation, taxon.getTaxonNodes());
+ }
+ }else if(taxonBase instanceof Synonym){
+ Synonym synonym = (Synonym) taxonBase;
+
+ Set<Taxon> taxa = synonym.getAcceptedTaxa();
+ setInputForMultipleTaxa(conversation, taxa);
+ }
+ }
}
+
/**
- * <p>NewInstanceFromTaxonBase</p>
+ * <p>NewEmptyInstance</p>
*
- * @param taxonBaseUuid a {@link java.util.UUID} object.
+ * @param parentNodeUuid a {@link java.util.UUID} object.
* @return a {@link eu.etaxonomy.taxeditor.editor.TaxonEditorInput} object.
*/
+ private void initForParentTaxonNode(UUID parentNodeUuid){
+
+
+ TaxonNameBase<?, ?> name = PreferencesUtil.getPreferredNomenclaturalCode().getNewTaxonNameInstance(null);
+ ITaxonTreeNode parentNode = CdmStore.getService(IClassificationService.class).getTreeNodeByUuid(parentNodeUuid);
+
+ Taxon newTaxon = Taxon.NewInstance(name, parentNode.getReference());
+ TaxonNode newTaxonNode = parentNode.addChildTaxon(newTaxon, parentNode.getReference(), parentNode.getMicroReference());
+
+ // add the new taxon to the editors persistence context
+ UUID newTaxonNodeUuid = getCdmEntitySession().remoteSave(CdmStore.getService(ITaxonNodeService.class),newTaxonNode);
+
+ initForTaxonNode(newTaxonNodeUuid);
+ }
+
public static TaxonEditorInput NewInstanceFromTaxonBase(UUID taxonBaseUuid){
ConversationHolder conversation = CdmStore.createConversation();
return input;
}
- private static TaxonEditorInput getInputForMultipleNodes(ConversationHolder conversation, Set<TaxonNode> taxonNodes){
- if(taxonNodes.size() == 1){
- TaxonNode taxonNode = taxonNodes.iterator().next();
- return NewInstance(taxonNode.getUuid(), conversation);
- }else if(taxonNodes.size() > 1){
- TaxonNode taxonNode = ChooseFromMultipleTaxonNodesDialog.choose(taxonNodes);
- if(taxonNode != null){
- return NewInstance(taxonNode.getUuid(), conversation);
- }
- }else if(taxonNodes.size() == 0){
- // this is an undesired state
- MessagingUtils.warningDialog("Incorrect state", TaxonEditorInput.class, "The accepted taxon is not part of any classification. This should not have happened.");
- }
- return null;
+
+ private void setInputForMultipleNodes(ConversationHolder conversation, Set<TaxonNode> taxonNodes){
+ if(taxonNodes.size() == 1){
+ TaxonNode taxonNode = taxonNodes.iterator().next();
+ init(taxonNode);
+ }else if(taxonNodes.size() > 1){
+ TaxonNode taxonNode = ChooseFromMultipleTaxonNodesDialog.choose(taxonNodes);
+ if(taxonNode != null){
+ init(taxonNode);
+ }
+ }else if(taxonNodes.size() == 0){
+ // this is an undesired state
+ MessagingUtils.warningDialog("Incorrect state", TaxonEditorInput.class, "The accepted taxon is not part of any classification. This should not have happened.");
+ }
}
- private static TaxonEditorInput getInputForMultipleTaxa(ConversationHolder conversation, Set<Taxon> taxa){
- if(taxa.size() == 1){
- Taxon taxon = taxa.iterator().next();
- Set<TaxonNode> nodes = taxon.getTaxonNodes();
- return getInputForMultipleNodes(conversation, nodes);
- }else if(taxa.size() > 1){
- Set<TaxonNode> taxonNodes = new HashSet<TaxonNode>();
- for ( Taxon taxon : taxa ){
- taxonNodes.addAll(taxon.getTaxonNodes());
- }
- return getInputForMultipleNodes(conversation, taxonNodes);
- }else if(taxa.size() == 0){
- // this is an undesired state
- MessagingUtils.warningDialog("Incorrect state", TaxonEditorInput.class, "Trying to open accepted taxon for a synonym or misapplication but" +
- " no accepted taxa are present. This should not have happened.");
- }
- return null;
+ private void setInputForMultipleTaxa(ConversationHolder conversation, Set<Taxon> taxa){
+ if(taxa.size() == 1){
+ Taxon taxon = taxa.iterator().next();
+ Set<TaxonNode> nodes = taxon.getTaxonNodes();
+ setInputForMultipleNodes(conversation, nodes);
+ }else if(taxa.size() > 1){
+ Set<TaxonNode> taxonNodes = new HashSet<TaxonNode>();
+ for ( Taxon taxon : taxa ){
+ taxonNodes.addAll(taxon.getTaxonNodes());
+ }
+ setInputForMultipleNodes(conversation, taxonNodes);
+ }else if(taxa.size() == 0){
+ // this is an undesired state
+ MessagingUtils.warningDialog("Incorrect state", TaxonEditorInput.class, "Trying to open accepted taxon for a synonym or misapplication but" +
+ " no accepted taxa are present. This should not have happened.");
+ }
}
/**
- * <p>NewEmptyInstance</p>
+ * <p>NewInstance</p>
*
- * @param parentNodeUuid a {@link java.util.UUID} object.
+ * @param taxonNodeUuid a {@link java.util.UUID} object.
* @return a {@link eu.etaxonomy.taxeditor.editor.TaxonEditorInput} object.
+ * @throws java.lang.Exception if any.
*/
- public static TaxonEditorInput NewEmptyInstance(UUID parentNodeUuid){
- ConversationHolder conversation = CdmStore.createConversation();
+ public static TaxonEditorInput NewInstance(UUID taxonNodeUuid) throws Exception {
+ return new TaxonEditorInput(taxonNodeUuid, CdmType.TAXON_NODE);
- TaxonNameBase<?, ?> name = PreferencesUtil.getPreferredNomenclaturalCode().getNewTaxonNameInstance(null);
- ITaxonTreeNode parentNode = CdmStore.getService(IClassificationService.class).getTreeNodeByUuid(parentNodeUuid);
+ }
+
+ /**
+ * <p>NewInstanceFromTaxonBase</p>
+ *
+ * @param taxonBaseUuid a {@link java.util.UUID} object.
+ * @return a {@link eu.etaxonomy.taxeditor.editor.TaxonEditorInput} object.
+ */
+ public static TaxonEditorInput NewInstanceFromTaxonBase(UUID taxonBaseUuid){
+ return new TaxonEditorInput(taxonBaseUuid, CdmType.TAXON_BASE);
+ }
- Taxon newTaxon = Taxon.NewInstance(name, parentNode.getReference());
- TaxonNode newTaxonNode = parentNode.addChildTaxon(newTaxon, parentNode.getReference(), parentNode.getMicroReference());
- // add the new taxon to the editors persistence context
- UUID newTaxonNodeUuid = CdmStore.getService(ITaxonNodeService.class).save(newTaxonNode);
- return new TaxonEditorInput(newTaxonNode, conversation);
+
+ /**
+ * <p>NewEmptyInstance</p>
+ *
+ * @param parentNodeUuid a {@link java.util.UUID} object.
+ * @return a {@link eu.etaxonomy.taxeditor.editor.TaxonEditorInput} object.
+ */
+ public static TaxonEditorInput NewEmptyInstance(UUID parentNodeUuid){
+ return new TaxonEditorInput(parentNodeUuid, CdmType.PARENT_TAXON_NODE);
}
- /* (non-Javadoc)
- * @see org.eclipse.ui.IEditorInput#exists()
- */
- /**
- *
- * @return a boolean.
- */
- @Override
+ /* (non-Javadoc)
+ * @see org.eclipse.ui.IEditorInput#exists()
+ */
+ /**
+ * <p>exists</p>
+ *
+ * @return a boolean.
+ */
+ @Override
public boolean exists() {
- return taxonNode != null;
- }
-
- /* (non-Javadoc)
- * @see org.eclipse.ui.IEditorInput#getImageDescriptor()
- */
- /**
-
* <p>getImageDescriptor</p>
- *
- * @return a {@link org.eclipse.jface.resource.ImageDescriptor} object.
- */
- @Override
+ return taxonNode != null;
+ }
+
+ /* (non-Javadoc)
+ * @see org.eclipse.ui.IEditorInput#getImageDescriptor()
+ */
+ /**
+ * <p>getImageDescriptor</p>
+ *
+ * @return a {@link org.eclipse.jface.resource.ImageDescriptor} object.
+ */
+ @Override
public ImageDescriptor getImageDescriptor() {
- return null;
- }
-
- /* (non-Javadoc)
- * @see org.eclipse.ui.IEditorInput#getName()
- */
- /**
- *
- * @return a {@link java.lang.String} object.
- */
- @Override
+ return null;
+ }
+
+ /* (non-Javadoc)
+ * @see org.eclipse.ui.IEditorInput#getName()
+ */
+ /**
+ * <p>getName</p>
+ *
+ * @return a {@link java.lang.String} object.
+ */
+ @Override
public String getName() {
- if(getTaxon() == null){
- return null;
- }
- TaxonNameBase<?, ?> name = getTaxon().getName();
- if (name == null || name.getTitleCache() == null) {
- return "New taxon";
- } else {
- return name.getTitleCache();
- }
- }
-
- /* (non-Javadoc)
- * @see org.eclipse.ui.IEditorInput#getPersistable()
- */
- /**
-
* <p>getPersistable</p>
- *
- * @return a {@link org.eclipse.ui.IPersistableElement} object.
- */
- @Override
+ if(getTaxon() == null){
+ return null;
+ }
+ TaxonNameBase<?, ?> name = getTaxon().getName();
+ if (name == null || name.getTitleCache() == null) {
+ return "New taxon";
+ } else {
+ return name.getTitleCache();
+ }
+ }
+
+ /* (non-Javadoc)
+ * @see org.eclipse.ui.IEditorInput#getPersistable()
+ */
+ /**
+ * <p>getPersistable</p>
+ *
+ * @return a {@link org.eclipse.ui.IPersistableElement} object.
+ */
+ @Override
public IPersistableElement getPersistable() {
-// if(CdmStore.isActive()){
-// TaxonNode test = CdmStore.getTaxonTreeService().getTaxonNodeByUuid(taxonNode.getUuid());
-// boolean isPersistable = CdmStore.getTaxonTreeService().getTaxonNodeByUuid(taxonNode.getUuid()) != null;
-// if (isPersistable) {
-// return this;
-// }
-// }
- return null;
- }
-
- /* (non-Javadoc)
- * @see org.eclipse.ui.IEditorInput#getToolTipText()
- */
- /**
-
* <p>getToolTipText</p>
- *
- * @return a {@link java.lang.String} object.
- */
- @Override
+ // if(CdmStore.isActive()){
+ // TaxonNode test = CdmStore.getTaxonTreeService().getTaxonNodeByUuid(taxonNode.getUuid());
+ // boolean isPersistable = CdmStore.getTaxonTreeService().getTaxonNodeByUuid(taxonNode.getUuid()) != null;
+ // if (isPersistable) {
+ // return this;
+ // }
+ // }
+ return null;
+ }
+
+ /* (non-Javadoc)
+ * @see org.eclipse.ui.IEditorInput#getToolTipText()
+ */
+ /**
+ * <p>getToolTipText</p>
+ *
+ * @return a {@link java.lang.String} object.
+ */
+ @Override
public String getToolTipText() {
- return getName();
- }
-
- /* (non-Javadoc)
- * @see org.eclipse.core.runtime.IAdaptable#getAdapter(java.lang.Class)
- */
- /** {@inheritDoc} */
- @Override
+ return getName();
+ }
+
+ /* (non-Javadoc)
+ * @see org.eclipse.core.runtime.IAdaptable#getAdapter(java.lang.Class)
+ */
+ /** {@inheritDoc} */
+ @Override
public Object getAdapter(Class adapter) {
- if (adapter == Taxon.class) {
- return taxonNode.getTaxon();
- }
+ if (adapter == Taxon.class) {
+ return getTaxon();
+ }
- if (adapter == TaxonNode.class) {
- return taxonNode;
- }
+ if (adapter == TaxonNode.class) {
+ return taxonNode;
+ }
- return null;
- }
+ return null;
+ }
- /**
- * {@inheritDoc}
- *
- * Overrides equals to ensure that a taxon can only be edited by
- * one editor at a time.
- */
- @Override
+ /**
+ * {@inheritDoc}
+ *
+ * Overrides equals to ensure that a taxon can only be edited by
+ * one editor at a time.
+ */
+ @Override
public boolean equals(Object obj) {
- if (TaxonEditorInput.class.equals(obj.getClass())
- && getTaxon() != null
- && getTaxon().equals(((TaxonEditorInput) obj).getTaxon())){
- if(((TaxonEditorInput) obj).getInitiallySelectedTaxonBase() != null){
- setInitiallySelectedTaxonBase(((TaxonEditorInput) obj).getInitiallySelectedTaxonBase());
- }
- return true;
- }
- return false;
- }
-
- /**
- * <p>getTaxon</p>
- *
- * @return the taxon
- */
- public Taxon getTaxon(){
- return taxonNode.getTaxon();
- }
-
- /**
- * <p>Getter for the field <code>taxonNode</code>.</p>
- *
- * @return the taxonNode
- */
- public TaxonNode getTaxonNode() {
- return taxonNode;
- }
-
- /*
- * (non-Javadoc)
- * @see eu.etaxonomy.cdm.api.conversation.IConversationEnabled#getConversationHolder()
- */
- /**
- * <p>getConversationHolder</p>
- *
- * @return a {@link eu.etaxonomy.cdm.api.conversation.ConversationHolder} object.
- */
- @Override
+ if (TaxonEditorInput.class.equals(obj.getClass())
+ && getTaxon() != null
+ && getTaxon().equals(((TaxonEditorInput) obj).getTaxon())){
+ if(((TaxonEditorInput) obj).getInitiallySelectedTaxonBase() != null){
+ setInitiallySelectedTaxonBase(((TaxonEditorInput) obj).getInitiallySelectedTaxonBase());
+ }
+ return true;
+ }
+ return false;
+ }
+
+ /**
+ * <p>getTaxon</p>
+ *
+ * @return the taxon
+ */
+ public Taxon getTaxon(){
+ Taxon taxon = CdmBase.deproxy(taxonNode.getTaxon(), Taxon.class);
+ return taxon;
+ }
+
+ /**
+ * <p>Getter for the field <code>taxonNode</code>.</p>
+ *
+ * @return the taxonNode
+ */
+ public TaxonNode getTaxonNode() {
+ return taxonNode;
+ }
+
+ /*
+ * (non-Javadoc)
+ * @see eu.etaxonomy.cdm.api.conversation.IConversationEnabled#getConversationHolder()
+ */
+ /**
+ * <p>getConversationHolder</p>
+ *
+ * @return a {@link eu.etaxonomy.cdm.api.conversation.ConversationHolder} object.
+ */
+ @Override
public ConversationHolder getConversationHolder() {
- return conversation;
- }
-
- /*
- * (non-Javadoc)
- * @see eu.etaxonomy.cdm.persistence.hibernate.ICdmPostCrudObserver#update(eu.etaxonomy.cdm.persistence.hibernate.CdmCrudEvent)
- */
- /** {@inheritDoc} */
- @Override
+ return conversation;
+ }
+
+ /*
+ * (non-Javadoc)
+ * @see eu.etaxonomy.cdm.persistence.hibernate.ICdmPostCrudObserver#update(eu.etaxonomy.cdm.persistence.hibernate.CdmCrudEvent)
+ */
+ /** {@inheritDoc} */
+ @Override
public void update(CdmDataChangeMap events) {
- if(dataChangeBehavior == null){
- dataChangeBehavior = new TaxonEditorInputDataChangeBehaviour(this);
- }
+ if(dataChangeBehavior == null){
+ dataChangeBehavior = new TaxonEditorInputDataChangeBehaviour(this);
+ }
- DataChangeBridge.handleDataChange(events, dataChangeBehavior);
- }
-
- /* (non-Javadoc)
- * @see org.eclipse.ui.IPersistableElement#getFactoryId()
- */
- /**
- *
- * @return a {@link java.lang.String} object.
- */
- @Override
+ DataChangeBridge.handleDataChange(events, dataChangeBehavior);
+ }
+
+ /* (non-Javadoc)
+ * @see org.eclipse.ui.IPersistableElement#getFactoryId()
+ */
+ /**
+ * <p>getFactoryId</p>
+ *
+ * @return a {@link java.lang.String} object.
+ */
+ @Override
public String getFactoryId() {
- return TaxonEditorInputFactory.getFactoryId();
- }
-
- /* (non-Javadoc)
- * @see org.eclipse.ui.IPersistable#saveState(org.eclipse.ui.IMemento)
- */
- /** {@inheritDoc} */
- @Override
+ return TaxonEditorInputFactory.getFactoryId();
+ }
+
+ /* (non-Javadoc)
+ * @see org.eclipse.ui.IPersistable#saveState(org.eclipse.ui.IMemento)
+ */
+ /** {@inheritDoc} */
+ @Override
public void saveState(IMemento memento) {
- TaxonEditorInputFactory.saveState(memento, this);
- }
+ TaxonEditorInputFactory.saveState(memento, this);
+ }
/**
* @param taxonBase a {@link eu.etaxonomy.cdm.model.taxon.TaxonBase} object.
*/
public void setInitiallySelectedTaxonBase(TaxonBase taxonBase) {
- this.initiallySelectedTaxonBase = taxonBase;
- }
-
- /**
- * <p>Getter for the field <code>initiallySelectedTaxonBase</code>.</p>
- *
- * @return a {@link eu.etaxonomy.cdm.model.taxon.TaxonBase} object.
- */
- public TaxonBase getInitiallySelectedTaxonBase() {
- return initiallySelectedTaxonBase;
- }
-
- @Override
- public String toString() {
- return String.format("%s[%s]", this.getClass().getSimpleName(), getTaxon());
- }
+ this.initiallySelectedTaxonBase = taxonBase;
+ }
+
+ /**
+ * <p>Getter for the field <code>initiallySelectedTaxonBase</code>.</p>
+ *
+ * @return a {@link eu.etaxonomy.cdm.model.taxon.TaxonBase} object.
+ */
+ public TaxonBase getInitiallySelectedTaxonBase() {
+ return initiallySelectedTaxonBase;
+ }
+
+ @Override
+ public String toString() {
+ return String.format("%s[%s]", this.getClass().getSimpleName(), getTaxon());
+ }
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.editor.CdmEntitySessionInput#getService()
+ */
+ @Override
+ public ITaxonNodeService getService() {
+ return service;
+ }
+
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.editor.CdmEntitySessionInput#getRootEntities()
+ */
+ @Override
+ public List<TaxonNode> getRootEntities() {
+ return Arrays.asList(taxonNode);
+ }
+
+
+ /* (non-Javadoc)
+ * @see eu.etaxonomy.taxeditor.editor.CdmEntitySessionInput#update()
+ */
+ @Override
+ public <T extends CdmBase> void update() {
+ taxonNode = getCdmEntitySession().remoteUpdate(service, taxonNode);
+ }
}
BGBM BDI Projects / taxeditor.git / blobdiff