eu.etaxonomy.taxeditor.store/src/main/java/eu/etaxonomy/taxeditor/io/e4/in/excel/taxa/ExcelNormalExplicitTaxaImportWizardE4.java

   1 /**
   2 * Copyright (C) 2007 EDIT
   3 * European Distributed Institute of Taxonomy
   4 * http://www.e-taxonomy.eu
   5 *
   6 * The contents of this file are subject to the Mozilla Public License Version 1.1
   7 * See LICENSE.TXT at the top of this package for the full license terms.
   8 */
   9 package eu.etaxonomy.taxeditor.io.e4.in.excel.taxa;
  10
  11 import java.io.File;
  12 import java.io.FileInputStream;
  13 import java.io.FileNotFoundException;
  14 import java.io.IOException;
  15 import eu.etaxonomy.cdm.common.URI;
  16 import java.util.ArrayList;
  17 import java.util.List;
  18
  19 import javax.inject.Inject;
  20 import javax.inject.Named;
  21
  22 import org.apache.commons.io.IOUtils;
  23 import org.apache.logging.log4j.LogManager;import org.apache.logging.log4j.Logger;
  24 import org.eclipse.core.runtime.jobs.Job;
  25 import org.eclipse.e4.core.contexts.ContextInjectionFactory;
  26 import org.eclipse.e4.core.contexts.IEclipseContext;
  27 import org.eclipse.e4.core.di.annotations.Optional;
  28 import org.eclipse.e4.ui.services.IServiceConstants;
  29 import org.eclipse.e4.ui.workbench.modeling.EPartService;
  30 import org.eclipse.jface.viewers.IStructuredSelection;
  31 import org.eclipse.jface.viewers.TreeSelection;
  32
  33 import eu.etaxonomy.cdm.database.DbSchemaValidation;
  34 import eu.etaxonomy.cdm.io.common.IImportConfigurator.SOURCE_TYPE;
  35 import eu.etaxonomy.cdm.io.excel.taxa.NormalExplicitImportConfigurator;
  36 import eu.etaxonomy.cdm.persistence.dto.TaxonNodeDto;
  37 import eu.etaxonomy.taxeditor.io.e4.in.AbstractImportWizardE4;
  38 import eu.etaxonomy.taxeditor.io.e4.in.GenericConfiguratorWizardPageE4;
  39 import eu.etaxonomy.taxeditor.io.e4.in.ImportFromFileDataSourceWithReferenceWizardPage;
  40 import eu.etaxonomy.taxeditor.l10n.Messages;
  41 import eu.etaxonomy.taxeditor.store.CdmStore;
  42
  43
  44 /**
  45  * @author pplitzner
  46  * @since Oct 5, 2017
  47  */
  48 public class ExcelNormalExplicitTaxaImportWizardE4 extends AbstractImportWizardE4<NormalExplicitImportConfigurator>{
  49
  50     private NormalExplicitImportConfigurator configurator;
  51
  52         private ImportFromFileDataSourceWithReferenceWizardPage dataSourcePage;
  53         private static final Logger logger = LogManager.getLogger(ExcelNormalExplicitTaxaImportWizardE4.class);
  54
  55         @Inject
  56         public ExcelNormalExplicitTaxaImportWizardE4(IEclipseContext context, EPartService partService,
  57                 @Optional@Named(IServiceConstants.ACTIVE_SELECTION)IStructuredSelection selection) {
  58             super(context, partService, selection);
  59         }
  60
  61         @Override
  62         public NormalExplicitImportConfigurator getConfigurator() {
  63                 return configurator;
  64         }
  65
  66         @Override
  67         public boolean performFinish() {
  68                 URI source = dataSourcePage.getUri();
  69                 configurator.setSource(source);
  70                 configurator.setDbSchemaValidation(DbSchemaValidation.CREATE);
  71                 configurator.setSourceReferenceTitle(dataSourcePage.getTextReferenceString().getText());
  72                 File file = new File(source.getJavaUri());
  73                 FileInputStream fis = null;
  74
  75                 try {
  76                         fis = new FileInputStream(file);
  77                 } catch (FileNotFoundException e) {
  78                         logger.error("Error while reading file" + source.toString());
  79                 }
  80                 try {
  81             configurator.setStream(IOUtils.toByteArray(fis));
  82         } catch (IOException e) {
  83             // TODO Auto-generated catch block
  84             e.printStackTrace();
  85         }
  86             Job job = CdmStore.getImportManager().createIOServiceJob(configurator,file , SOURCE_TYPE.INPUTSTREAM);
  87             CdmStore.getImportManager().run(job);
  88
  89                 return true;
  90         }
  91
  92         @Override
  93     public void init() {
  94                 configurator =  CdmStore.getImportManager().NormalExplicitConfigurator();
  95                 if (selection instanceof TreeSelection && !selection.isEmpty()){
  96                         TaxonNodeDto node = (TaxonNodeDto)selection.getFirstElement();
  97                         configurator.setParentUUID(node.getTaxonUuid());
  98                         configurator.setClassificationUuid(node.getClassificationUUID());
  99                 }
 100         }
 101
 102         @Override
 103         public void addPages() {
 104             dataSourcePage = ContextInjectionFactory.make(ImportFromFileDataSourceWithReferenceWizardPage.class, context);
 105                 dataSourcePage.setTitle("Choose NormalExplicit");
 106                 dataSourcePage.setDescription("Please choose an xls file in the NormalExplicit format.");
 107                 dataSourcePage.setExtensions(new String[]{"*.xlsx", "*.xls", "*.*"});
 108                 addPage(dataSourcePage);
 109                 super.addPages();
 110         }
 111
 112         @Override
 113     protected void addConfiguratorPage(){
 114          List<String> ignoreMethods = new ArrayList<>();
 115          ignoreMethods.add("setIgnoreNull");
 116          ignoreMethods.add("setInteractWithUser");
 117          ignoreMethods.add("setUseClassification");
 118          ignoreMethods.add("setRegisterAuditing");
 119          ignoreMethods.add("setDeduplicateAuthors");
 120          ignoreMethods.add("setDeduplicateReferences");
 121          pageConfiguration = ContextInjectionFactory.make(GenericConfiguratorWizardPageE4.class, context);
 122          pageConfiguration.initImport(getConfigurator(), ignoreMethods, Messages.ExcelTaxonUpdateWizard_ConfiguratorWizard_label);
 123          addPage(pageConfiguration);
 124     }
 125 }