eu.etaxonomy.taxeditor.store/src/main/java/eu/etaxonomy/taxeditor/view/dataimport/BioCaseEditorInput.java

   1 // $Id$
   2 /**
   3  * Copyright (C) 2014 EDIT
   4  * European Distributed Institute of Taxonomy
   5  * http://www.e-taxonomy.eu
   6  *
   7  * The contents of this file are subject to the Mozilla Public License Version 1.1
   8  * See LICENSE.TXT at the top of this package for the full license terms.
   9  */
  10 package eu.etaxonomy.taxeditor.editor.view.dataimport;
  11
  12 import java.io.IOException;
  13 import java.io.InputStream;
  14 import java.net.URI;
  15 import java.util.ArrayList;
  16 import java.util.Collection;
  17
  18 import org.apache.http.client.ClientProtocolException;
  19 import org.eclipse.swt.widgets.Display;
  20
  21 import eu.etaxonomy.cdm.ext.occurrence.OccurenceQuery;
  22 import eu.etaxonomy.cdm.ext.occurrence.bioCase.BioCaseQueryServiceWrapper;
  23 import eu.etaxonomy.cdm.io.common.CdmDefaultImport;
  24 import eu.etaxonomy.cdm.io.specimen.abcd206.in.Abcd206ImportConfigurator;
  25 import eu.etaxonomy.cdm.model.occurrence.SpecimenOrObservationBase;
  26 import eu.etaxonomy.taxeditor.editor.view.dataimport.transientServices.TransientCdmRepository;
  27 import eu.etaxonomy.taxeditor.store.CdmStore;
  28
  29 /**
  30  * @author pplitzner
  31  * @date 25.02.2014
  32  *
  33  */
  34 public class BioCaseEditorInput extends DataImportEditorInput<SpecimenOrObservationBase<?>> {
  35
  36     private final URI endPoint;
  37
  38     /**
  39      * Constructs a new BioCaseEditorInput.
  40      * @param query The {@link OccurenceQuery} object holding all necessary parameters.
  41      * @param endPoint If the endPoint {@link URI} is <code>null</code> then the default endPoint is used
  42      * (<i>http://ww3.bgbm.org/biocase/pywrapper.cgi?dsa=Herbar</i>)
  43      */
  44     public BioCaseEditorInput(OccurenceQuery query, URI endPoint) {
  45         super();
  46         this.query = query;
  47         this.endPoint = endPoint;
  48     }
  49
  50     @Override
  51     public void query(){
  52         String errorMessage = "Could not execute query " + query;
  53
  54         Collection<SpecimenOrObservationBase<?>> results = new ArrayList<SpecimenOrObservationBase<?>>();
  55         try {
  56             //FIXME move ABCD import to cdmlib -> this will also get rid of the transient services
  57             InputStream resultStream;
  58             resultStream = new BioCaseQueryServiceWrapper().query(query, endPoint);
  59             Abcd206ImportConfigurator configurator = Abcd206ImportConfigurator.NewInstance(resultStream, null, false);
  60             TransientCdmRepository repo =
  61                     new TransientCdmRepository(CdmStore.getCurrentApplicationConfiguration());
  62             configurator.setCdmAppController(repo);
  63
  64             CdmDefaultImport<Abcd206ImportConfigurator> importer = new CdmDefaultImport<Abcd206ImportConfigurator>();
  65             importer.invoke(configurator);
  66             results = repo.getUnits();
  67             setResults(results);
  68         } catch (ClientProtocolException e) {
  69             logger.error(errorMessage, e);
  70         } catch (IOException e) {
  71             logger.error(errorMessage, e);
  72         }
  73
  74         setResults(results);
  75
  76         Display.getDefault().asyncExec(new Runnable() {
  77
  78             @Override
  79             public void run() {
  80                 CdmStore.getContextManager().notifyContextRefresh();
  81             }
  82         });
  83     }
  84
  85     /* (non-Javadoc)
  86      * @see org.eclipse.ui.IEditorInput#getName()
  87      */
  88     @Override
  89     public String getName() {
  90         return "[BioCASE] " + query.toString();
  91     }
  92
  93     /* (non-Javadoc)
  94      * @see org.eclipse.ui.IEditorInput#getToolTipText()
  95      */
  96     @Override
  97     public String getToolTipText() {
  98         return "[BioCASE] " + query.toString();
  99     }
 100
 101     /* (non-Javadoc)
 102      * @see java.lang.Object#hashCode()
 103      */
 104     @Override
 105     public int hashCode() {
 106         final int prime = 31;
 107         int result = 1;
 108         result = prime * result + ((query == null) ? 0 : query.hashCode());
 109         return result;
 110     }
 111
 112     /* (non-Javadoc)
 113      * @see java.lang.Object#equals(java.lang.Object)
 114      */
 115     @Override
 116     public boolean equals(Object obj) {
 117         if (this == obj) {
 118             return true;
 119         }
 120         if (obj == null) {
 121             return false;
 122         }
 123         if (getClass() != obj.getClass()) {
 124             return false;
 125         }
 126         BioCaseEditorInput other = (BioCaseEditorInput) obj;
 127         if (query == null) {
 128             if (other.query != null) {
 129                 return false;
 130             }
 131         } else if (!query.equals(other.query)) {
 132             return false;
 133         }
 134         return true;
 135     }
 136 }