eu.etaxonomy.taxeditor.editor/src/main/java/eu/etaxonomy/taxeditor/editor/view/dataimport/SpecimenImportView.java

   1 // $Id$
   2 /**
   3 * Copyright (C) 2014 EDIT
   4 * European Distributed Institute of Taxonomy
   5 * http://www.e-taxonomy.eu
   6 *
   7 * The contents of this file are subject to the Mozilla Public License Version 1.1
   8 * See LICENSE.TXT at the top of this package for the full license terms.
   9 */
  10 package eu.etaxonomy.taxeditor.editor.view.dataimport;
  11
  12 import java.io.IOException;
  13 import java.io.InputStream;
  14 import java.net.URI;
  15 import java.util.ArrayList;
  16 import java.util.Collection;
  17
  18 import org.apache.http.client.ClientProtocolException;
  19 import org.eclipse.core.runtime.jobs.Job;
  20
  21 import eu.etaxonomy.cdm.ext.occurrence.bioCase.BioCaseQueryServiceWrapper;
  22 import eu.etaxonomy.cdm.io.common.CdmDefaultImport;
  23 import eu.etaxonomy.cdm.io.common.IImportConfigurator.SOURCE_TYPE;
  24 import eu.etaxonomy.cdm.io.specimen.abcd206.in.Abcd206ImportConfigurator;
  25 import eu.etaxonomy.cdm.model.occurrence.SpecimenOrObservationBase;
  26 import eu.etaxonomy.taxeditor.editor.view.dataimport.transientServices.TransientCdmRepository;
  27 import eu.etaxonomy.taxeditor.store.CdmStore;
  28
  29 /**
  30  * @author pplitzner
  31  * @date Sep 3, 2014
  32  *
  33  */
  34 public class SpecimenImportView extends DataImportView<SpecimenOrObservationBase<?>> {
  35
  36     public static final String ID = "eu.etaxonomy.taxeditor.editor.view.dataimport.SpecimenImportView"; //$NON-NLS-1$
  37
  38     private URI endPoint;
  39
  40     public SpecimenImportView() {
  41     }
  42
  43     /**
  44      * @param endPoint
  45      */
  46     public void setEndpoint(URI endPoint) {
  47         this.endPoint = endPoint;
  48     }
  49
  50     /* (non-Javadoc)
  51      * @see eu.etaxonomy.taxeditor.editor.view.dataimport.DataImportView#getTextForTableItem(java.lang.Object)
  52      */
  53     @Override
  54     protected String getTextForTableItem(SpecimenOrObservationBase<?> item) {
  55         return item.getTitleCache();
  56     }
  57
  58     /* (non-Javadoc)
  59      * @see eu.etaxonomy.taxeditor.editor.view.dataimport.DataImportView#query()
  60      */
  61     @Override
  62     public void query() {
  63         String errorMessage = "Could not execute query " + query;
  64
  65         Collection<SpecimenOrObservationBase<?>> results = new ArrayList<SpecimenOrObservationBase<?>>();
  66         try {
  67             //FIXME move ABCD import to cdmlib -> this will also get rid of the transient services
  68             InputStream resultStream;
  69             resultStream = new BioCaseQueryServiceWrapper().query(query, endPoint);
  70             Abcd206ImportConfigurator configurator = Abcd206ImportConfigurator.NewInstance(null, null);
  71             TransientCdmRepository repo =
  72                     new TransientCdmRepository(CdmStore.getCurrentApplicationConfiguration());
  73             configurator.setCdmAppController(repo);
  74             configurator.setAddMediaAsMediaSpecimen(true);
  75             if(CdmStore.getCurrentSessionManager().isRemoting()) {
  76                 Job job = CdmStore.getImportManager().createIOServiceJob(configurator, resultStream, SOURCE_TYPE.INPUTSTREAM);
  77                 CdmStore.getImportManager().run(job);
  78             } else {
  79                 configurator.setSource(resultStream);
  80                 CdmDefaultImport<Abcd206ImportConfigurator> importer = new CdmDefaultImport<Abcd206ImportConfigurator>();
  81                 importer.invoke(configurator);
  82             }
  83             results = repo.getUnits();
  84             setResults(results);
  85         } catch (ClientProtocolException e) {
  86             logger.error(errorMessage, e);
  87         } catch (IOException e) {
  88             logger.error(errorMessage, e);
  89         }
  90
  91         setResults(results);
  92
  93     }
  94
  95 }