eu.etaxonomy.taxeditor.store/src/main/java/eu/etaxonomy/taxeditor/view/derivateSearch/DerivateLabelProvider.java

   1 // $Id$
   2 /**
   3 * Copyright (C) 2013 EDIT
   4 * European Distributed Institute of Taxonomy
   5 * http://www.e-taxonomy.eu
   6 *
   7 * The contents of this file are subject to the Mozilla Public License Version 1.1
   8 * See LICENSE.TXT at the top of this package for the full license terms.
   9 */
  10 package eu.etaxonomy.taxeditor.view.derivateSearch;
  11
  12 import java.util.Set;
  13
  14 import org.eclipse.jface.viewers.ColumnLabelProvider;
  15 import org.eclipse.jface.viewers.TreeNode;
  16 import org.eclipse.swt.graphics.Image;
  17
  18 import eu.etaxonomy.cdm.model.molecular.DnaSample;
  19 import eu.etaxonomy.cdm.model.molecular.Sequence;
  20 import eu.etaxonomy.cdm.model.molecular.SingleRead;
  21 import eu.etaxonomy.cdm.model.occurrence.Collection;
  22 import eu.etaxonomy.cdm.model.occurrence.DerivedUnit;
  23 import eu.etaxonomy.cdm.model.occurrence.FieldUnit;
  24 import eu.etaxonomy.cdm.model.occurrence.GatheringEvent;
  25 import eu.etaxonomy.cdm.model.occurrence.MediaSpecimen;
  26 import eu.etaxonomy.cdm.model.occurrence.SpecimenOrObservationBase;
  27 import eu.etaxonomy.cdm.model.occurrence.SpecimenOrObservationType;
  28 import eu.etaxonomy.taxeditor.model.ImageResources;
  29
  30 /**
  31  * Label provider for the views to show {@link SpecimenOrObservationBase}s.
  32  */
  33 public class DerivateLabelProvider extends ColumnLabelProvider {
  34
  35     private Set<SingleRead> multiLinkSingleReads;
  36
  37     /** {@inheritDoc} */
  38     @Override
  39     public String getText(Object element) {
  40         return getDerivateText(element);
  41     }
  42
  43     /** {@inheritDoc} */
  44     @Override
  45     public String getToolTipText(Object element) {
  46         return getDerivateText(element);
  47     }
  48
  49     /**
  50      *
  51      * @param element
  52      * @return
  53      */
  54     public static String getDerivateText(Object element){
  55         TreeNode parentNode = null;
  56         if(element instanceof TreeNode){
  57             parentNode = ((TreeNode) element).getParent();
  58             //unwrap specimen from TreeNode
  59             element = ((TreeNode) element).getValue();
  60         }
  61
  62         String label = "";
  63         if(element instanceof FieldUnit){
  64             FieldUnit fieldUnit = (FieldUnit)element;
  65             GatheringEvent gatheringEvent = fieldUnit.getGatheringEvent();
  66             if(gatheringEvent!=null){
  67                 label += gatheringEvent.getCountry()!=null?gatheringEvent.getCountry().getLabel()+", ":"";
  68                 label += gatheringEvent.getLocality()!=null?gatheringEvent.getLocality().getText()+", ":"";
  69 //                label += gatheringEvent.getGatheringDate()!=null?gatheringEvent.getGatheringDate()+", ":"";
  70                 label += gatheringEvent.getCollector()!=null?gatheringEvent.getCollector()+", ":"";
  71             }
  72             label += fieldUnit.getFieldNumber()!=null?fieldUnit.getFieldNumber():"";
  73         }
  74         else if(element instanceof DerivedUnit){
  75             DerivedUnit derivedUnit = (DerivedUnit)element;
  76             if(derivedUnit.getRecordBasis()==SpecimenOrObservationType.PreservedSpecimen){
  77                 if(parentNode!=null && parentNode.getValue() instanceof FieldUnit){
  78                     FieldUnit fieldUnit = (FieldUnit) parentNode.getValue();
  79                     GatheringEvent gatheringEvent = fieldUnit.getGatheringEvent();
  80                     if(gatheringEvent!=null){
  81                         label += gatheringEvent.getCollector()!=null?gatheringEvent.getCollector()+", ":"";
  82                     }
  83                     label += fieldUnit.getFieldNumber()!=null?fieldUnit.getFieldNumber()+", ":"";
  84                 }
  85                 Collection collection = derivedUnit.getCollection();
  86                 if(collection!=null){
  87                     label += collection.getName()!=null?collection.getName()+" ":"";
  88                     label += collection.getCode()!=null?"("+collection.getCode()+"), ":"";
  89                 }
  90                 label += derivedUnit.getAccessionNumber()!=null?derivedUnit.getAccessionNumber()+", ":"";
  91                 label += derivedUnit.getBarcode()!=null?derivedUnit.getBarcode():"";
  92             }
  93             else if(derivedUnit.getRecordBasis()==SpecimenOrObservationType.TissueSample){
  94
  95             }
  96         }
  97         else if(element instanceof MediaSpecimen){
  98             MediaSpecimen mediaSpecimen = (MediaSpecimen)element;
  99             //TODO implement
 100             label += element.toString();
 101         }
 102         else if(element instanceof DnaSample
 103                 || (element instanceof DerivedUnit
 104                         && ((SpecimenOrObservationBase<?>) element).getRecordBasis()==SpecimenOrObservationType.DnaSample)){
 105             //TODO implement
 106             label += element.toString();
 107
 108         }
 109         else if(element instanceof Sequence){
 110             Sequence sequence = (Sequence)element;
 111             label += "SampleDesignation?"+", ";
 112             label += sequence.getDnaMarker()!=null?sequence.getDnaMarker():"";
 113         }
 114         else if(element instanceof SingleRead){
 115             SingleRead singleRead = (SingleRead)element;
 116             label += singleRead.getPrimer()!=null?singleRead.getPrimer().getLabel()+", ":"";
 117             label += "Marker?";
 118         }
 119         else if(element instanceof SpecimenOrObservationBase){
 120             SpecimenOrObservationBase<?> derivate = (SpecimenOrObservationBase<?>) element;
 121             SpecimenOrObservationType type = derivate.getRecordBasis();
 122             return derivate.getTitleCache() + (type!=null?" ["+type.toString()+"]":"");
 123         }
 124         if(label.isEmpty()){
 125             label = element.toString();
 126         }
 127         else if(label.endsWith(", ")){
 128             label = label.substring(0, label.length()-2);
 129         }
 130         return label;
 131     }
 132
 133     /* (non-Javadoc)
 134      * @see org.eclipse.jface.viewers.ColumnLabelProvider#getImage(java.lang.Object)
 135      */
 136     @Override
 137     public Image getImage(Object element) {
 138         if(element instanceof TreeNode){
 139             element = ((TreeNode) element).getValue();
 140         }
 141         if(element instanceof FieldUnit){
 142             return ImageResources.getImage(ImageResources.FIELD_UNIT);
 143         }
 144         else if(element instanceof DerivedUnit){
 145             DerivedUnit derivedUnit = (DerivedUnit)element;
 146             if(derivedUnit.getRecordBasis()==SpecimenOrObservationType.FieldUnit){
 147                 return ImageResources.getImage(ImageResources.FIELD_UNIT);
 148             }
 149             else if(derivedUnit.getRecordBasis()==SpecimenOrObservationType.DnaSample){
 150                 return ImageResources.getImage(ImageResources.DNA_SAMPLE_DERIVATE);
 151             }
 152             else if(derivedUnit.getRecordBasis()==SpecimenOrObservationType.TissueSample){
 153                 return ImageResources.getImage(ImageResources.TISSUE_SAMPLE_DERIVATE);
 154             }
 155             else if(derivedUnit.getRecordBasis()==SpecimenOrObservationType.PreservedSpecimen){
 156                 return ImageResources.getImage(ImageResources.SPECIMEN_DERIVATE);
 157             }
 158             else if(derivedUnit.getRecordBasis()==SpecimenOrObservationType.StillImage){
 159                 return ImageResources.getImage(ImageResources.ARTWORK_DERIVATE);
 160             }
 161         }
 162         else if(element instanceof Sequence){
 163             return ImageResources.getImage(ImageResources.SEQUENCE_DERIVATE);
 164         }
 165
 166         else if(element instanceof SingleRead){
 167             if(multiLinkSingleReads.contains(element)){
 168                 return ImageResources.getImage(ImageResources.SINGLE_READ_DERIVATE_MULTILINK);
 169             }
 170             else{
 171                 return ImageResources.getImage(ImageResources.SINGLE_READ_DERIVATE);
 172             }
 173         }
 174         return super.getImage(element);
 175     }
 176
 177     /**
 178      * @param multiLinkSingleReads2
 179      */
 180     public void setMultiLinkSingleReads(Set<SingleRead> multiLinkSingleReads) {
 181         this.multiLinkSingleReads = multiLinkSingleReads;
 182     }
 183
 184 }