eu.etaxonomy.taxeditor.store/src/main/java/eu/etaxonomy/taxeditor/io/wizard/RISImportWizard.java

   1 /**
   2 * Copyright (C) 2017 EDIT
   3 * European Distributed Institute of Taxonomy
   4 * http://www.e-taxonomy.eu
   5 *
   6 * The contents of this file are subject to the Mozilla Public License Version 1.1
   7 * See LICENSE.TXT at the top of this package for the full license terms.
   8 */
   9 package eu.etaxonomy.taxeditor.io.wizard;
  10
  11 import java.io.File;
  12 import java.io.FileInputStream;
  13 import java.io.FileNotFoundException;
  14 import java.io.IOException;
  15 import java.net.URI;
  16 import java.util.ArrayList;
  17 import java.util.List;
  18
  19 import org.apache.commons.io.IOUtils;
  20 import org.apache.log4j.Logger;
  21 import org.eclipse.core.runtime.jobs.Job;
  22 import org.eclipse.jface.viewers.IStructuredSelection;
  23 import org.eclipse.ui.IWorkbench;
  24
  25 import eu.etaxonomy.cdm.database.DbSchemaValidation;
  26 import eu.etaxonomy.cdm.io.common.IImportConfigurator.SOURCE_TYPE;
  27 import eu.etaxonomy.cdm.io.reference.ris.in.RisReferenceImportConfigurator;
  28 import eu.etaxonomy.taxeditor.store.CdmStore;
  29
  30 /**
  31  * @author k.luther
  32  * @date 12.05.2017
  33  *
  34  */
  35 public class RISImportWizard extends AbstractImportWizard<RisReferenceImportConfigurator>{
  36     private RisReferenceImportConfigurator configurator;
  37
  38     private ImportFromFileDataSourceWizardPage dataSourcePage;
  39
  40     private static final Logger logger = Logger.getLogger(ExcelDistributionUpdateWizard.class);
  41
  42     /* (non-Javadoc)
  43      * @see eu.etaxonomy.taxeditor.io.wizard.AbstractImportWizard#getConfigurator()
  44      */
  45     /** {@inheritDoc} */
  46     @Override
  47     public RisReferenceImportConfigurator getConfigurator() {
  48         return configurator;
  49     }
  50
  51     /* (non-Javadoc)
  52      * @see org.eclipse.jface.wizard.Wizard#performFinish()
  53      */
  54     /** {@inheritDoc} */
  55     @Override
  56     public boolean performFinish() {
  57         URI source = dataSourcePage.getUri();
  58        // configurator.setSource(source);
  59 //        try {
  60 //            configurator = RisReferenceImportConfigurator.NewInstance(source, null);
  61 //        } catch (MalformedURLException e1) {
  62 //            // TODO Auto-generated catch block
  63 //            e1.printStackTrace();
  64 //        } catch (IOException e1) {
  65 //            // TODO Auto-generated catch block
  66 //            e1.printStackTrace();
  67 //        }
  68         configurator.setDbSchemaValidation(DbSchemaValidation.CREATE);
  69         File file = new File(source);
  70        FileInputStream fis;
  71
  72         try {
  73             fis = new FileInputStream(file);
  74             byte[] data;
  75             data = IOUtils.toByteArray(fis);
  76             configurator.setStream(data);
  77 //TODO: workaround, needs to be changed to source as byte array
  78             Job job = CdmStore.getImportManager().createIOServiceJob(configurator, data, SOURCE_TYPE.INPUTSTREAM);
  79             CdmStore.getImportManager().run(job);
  80         } catch (FileNotFoundException e) {
  81             logger.error("Error while reading file" + source.toString());
  82         } catch (IOException e){
  83
  84         }
  85
  86         //CdmStore.getImportManager().runMoniteredOperation(configurator, new File(source), SOURCE_TYPE.INPUTSTREAM);
  87
  88
  89         return true;
  90     }
  91
  92     /* (non-Javadoc)
  93      * @see org.eclipse.ui.IWorkbenchWizard#init(org.eclipse.ui.IWorkbench, org.eclipse.jface.viewers.IStructuredSelection)
  94      */
  95     /** {@inheritDoc} */
  96     @Override
  97     public void init(IWorkbench workbench, IStructuredSelection selection) {
  98         super.init(workbench, selection);
  99         configurator = RisReferenceImportConfigurator.NewInstance();
 100
 101     }
 102
 103     /* (non-Javadoc)
 104      * @see eu.etaxonomy.taxeditor.io.wizard.AbstractImportWizard#addPages()
 105      */
 106     /** {@inheritDoc} */
 107     @Override
 108     public void addPages() {
 109         //addConfiguratorPage();
 110         addDataSourcePage();
 111
 112
 113     }
 114     @Override
 115     protected void addConfiguratorPage(){
 116         List<String> ignoreMethods = new ArrayList<>();
 117         ignoreMethods.add("setIgnoreNull");
 118         ignoreMethods.add("setInteractWithUser");
 119         ignoreMethods.add("setUseClassification");
 120         pageConfiguration = GenericConfiguratorWizardPage.Import(CONFIGURATION_PAGE, getConfigurator(), ignoreMethods, "Ris Import");
 121         addPage(pageConfiguration);
 122     }
 123
 124     private void addDataSourcePage(){
 125         dataSourcePage = new ImportFromFileDataSourceWizardPage("Choose Ris File",
 126                 "Please choose an xls file in the Distribution Update format.", new String[]{"*.txt"});
 127         addPage(dataSourcePage);
 128     }
 129
 130 }