3 * Copyright (C) 2013 EDIT
4 * European Distributed Institute of Taxonomy
5 * http://www.e-taxonomy.eu
7 * The contents of this file are subject to the Mozilla Public License Version 1.1
8 * See LICENSE.TXT at the top of this package for the full license terms.
10 package eu
.etaxonomy
.taxeditor
.editor
.view
.dataimport
.transientServices
;
12 import java
.io
.IOException
;
13 import java
.util
.Collection
;
14 import java
.util
.EnumSet
;
15 import java
.util
.List
;
18 import java
.util
.UUID
;
20 import org
.apache
.lucene
.index
.CorruptIndexException
;
21 import org
.apache
.lucene
.queryParser
.ParseException
;
22 import org
.hibernate
.LockMode
;
23 import org
.hibernate
.Session
;
24 import org
.hibernate
.criterion
.Criterion
;
25 import org
.hibernate
.envers
.query
.criteria
.AuditCriterion
;
27 import eu
.etaxonomy
.cdm
.api
.service
.ITaxonService
;
28 import eu
.etaxonomy
.cdm
.api
.service
.TaxaAndNamesSearchMode
;
29 import eu
.etaxonomy
.cdm
.api
.service
.config
.DeleteConfiguratorBase
;
30 import eu
.etaxonomy
.cdm
.api
.service
.config
.IFindTaxaAndNamesConfigurator
;
31 import eu
.etaxonomy
.cdm
.api
.service
.config
.IIdentifiableEntityServiceConfigurator
;
32 import eu
.etaxonomy
.cdm
.api
.service
.config
.MatchingTaxonConfigurator
;
33 import eu
.etaxonomy
.cdm
.api
.service
.config
.SynonymDeletionConfigurator
;
34 import eu
.etaxonomy
.cdm
.api
.service
.config
.TaxonDeletionConfigurator
;
35 import eu
.etaxonomy
.cdm
.api
.service
.exception
.DataChangeNoRollbackException
;
36 import eu
.etaxonomy
.cdm
.api
.service
.exception
.HomotypicalGroupChangeException
;
37 import eu
.etaxonomy
.cdm
.api
.service
.exception
.ReferencedObjectUndeletableException
;
38 import eu
.etaxonomy
.cdm
.api
.service
.pager
.Pager
;
39 import eu
.etaxonomy
.cdm
.api
.service
.search
.LuceneMultiSearchException
;
40 import eu
.etaxonomy
.cdm
.api
.service
.search
.SearchResult
;
41 import eu
.etaxonomy
.cdm
.api
.service
.util
.TaxonRelationshipEdge
;
42 import eu
.etaxonomy
.cdm
.common
.monitor
.IProgressMonitor
;
43 import eu
.etaxonomy
.cdm
.model
.common
.Annotation
;
44 import eu
.etaxonomy
.cdm
.model
.common
.ISourceable
;
45 import eu
.etaxonomy
.cdm
.model
.common
.IdentifiableEntity
;
46 import eu
.etaxonomy
.cdm
.model
.common
.IdentifiableSource
;
47 import eu
.etaxonomy
.cdm
.model
.common
.LSID
;
48 import eu
.etaxonomy
.cdm
.model
.common
.Language
;
49 import eu
.etaxonomy
.cdm
.model
.common
.Marker
;
50 import eu
.etaxonomy
.cdm
.model
.common
.MarkerType
;
51 import eu
.etaxonomy
.cdm
.model
.common
.OrderedTermVocabulary
;
52 import eu
.etaxonomy
.cdm
.model
.common
.RelationshipBase
;
53 import eu
.etaxonomy
.cdm
.model
.common
.RelationshipBase
.Direction
;
54 import eu
.etaxonomy
.cdm
.model
.common
.UuidAndTitleCache
;
55 import eu
.etaxonomy
.cdm
.model
.description
.DescriptionElementBase
;
56 import eu
.etaxonomy
.cdm
.model
.description
.Feature
;
57 import eu
.etaxonomy
.cdm
.model
.description
.PresenceAbsenceTermBase
;
58 import eu
.etaxonomy
.cdm
.model
.location
.NamedArea
;
59 import eu
.etaxonomy
.cdm
.model
.media
.Media
;
60 import eu
.etaxonomy
.cdm
.model
.media
.MediaRepresentation
;
61 import eu
.etaxonomy
.cdm
.model
.media
.Rights
;
62 import eu
.etaxonomy
.cdm
.model
.name
.HomotypicalGroup
;
63 import eu
.etaxonomy
.cdm
.model
.name
.Rank
;
64 import eu
.etaxonomy
.cdm
.model
.name
.TaxonNameBase
;
65 import eu
.etaxonomy
.cdm
.model
.reference
.Reference
;
66 import eu
.etaxonomy
.cdm
.model
.taxon
.Classification
;
67 import eu
.etaxonomy
.cdm
.model
.taxon
.Synonym
;
68 import eu
.etaxonomy
.cdm
.model
.taxon
.SynonymRelationship
;
69 import eu
.etaxonomy
.cdm
.model
.taxon
.SynonymRelationshipType
;
70 import eu
.etaxonomy
.cdm
.model
.taxon
.Taxon
;
71 import eu
.etaxonomy
.cdm
.model
.taxon
.TaxonBase
;
72 import eu
.etaxonomy
.cdm
.model
.taxon
.TaxonRelationship
;
73 import eu
.etaxonomy
.cdm
.model
.taxon
.TaxonRelationshipType
;
74 import eu
.etaxonomy
.cdm
.model
.view
.AuditEvent
;
75 import eu
.etaxonomy
.cdm
.model
.view
.AuditEventRecord
;
76 import eu
.etaxonomy
.cdm
.persistence
.dao
.common
.AuditEventSort
;
77 import eu
.etaxonomy
.cdm
.persistence
.fetch
.CdmFetch
;
78 import eu
.etaxonomy
.cdm
.persistence
.query
.Grouping
;
79 import eu
.etaxonomy
.cdm
.persistence
.query
.MatchMode
;
80 import eu
.etaxonomy
.cdm
.persistence
.query
.OrderHint
;
81 import eu
.etaxonomy
.cdm
.strategy
.cache
.common
.IIdentifiableEntityCacheStrategy
;
82 import eu
.etaxonomy
.cdm
.strategy
.match
.IMatchStrategy
;
83 import eu
.etaxonomy
.cdm
.strategy
.merge
.IMergeStrategy
;
90 public class TransientTaxonService
implements ITaxonService
{
92 private final ITaxonService defaultTaxonService
;
95 * @param defaultTaxonService
97 public TransientTaxonService(ITaxonService defaultTaxonService
) {
98 this.defaultTaxonService
= defaultTaxonService
;
106 * @param propertyPaths
108 * @see eu.etaxonomy.cdm.api.service.IVersionableService#pageAuditEvents(eu.etaxonomy.cdm.model.common.VersionableEntity, java.lang.Integer, java.lang.Integer, eu.etaxonomy.cdm.persistence.dao.common.AuditEventSort, java.util.List)
111 public Pager
<AuditEventRecord
<TaxonBase
>> pageAuditEvents(TaxonBase t
, Integer pageSize
, Integer pageNumber
, AuditEventSort sort
, List
<String
> propertyPaths
) {
112 return defaultTaxonService
.pageAuditEvents(t
, pageSize
, pageNumber
, sort
, propertyPaths
);
116 * @param annotatedObj
121 * @param propertyPaths
123 * @see eu.etaxonomy.cdm.api.service.IAnnotatableService#getAnnotations(eu.etaxonomy.cdm.model.common.AnnotatableEntity, eu.etaxonomy.cdm.model.common.MarkerType, java.lang.Integer, java.lang.Integer, java.util.List, java.util.List)
126 public Pager
<Annotation
> getAnnotations(TaxonBase annotatedObj
, MarkerType status
, Integer pageSize
, Integer pageNumber
, List
<OrderHint
> orderHints
, List
<String
> propertyPaths
) {
127 return defaultTaxonService
.getAnnotations(annotatedObj
, status
, pageSize
, pageNumber
, orderHints
, propertyPaths
);
132 * @see eu.etaxonomy.cdm.api.service.IService#clear()
135 public void clear() {
136 defaultTaxonService
.clear();
142 * @see eu.etaxonomy.cdm.api.service.IService#lock(eu.etaxonomy.cdm.model.common.ICdmBase, org.hibernate.LockMode)
145 public void lock(TaxonBase t
, LockMode lockMode
) {
146 defaultTaxonService
.lock(t
, lockMode
);
152 * @param propertyPaths
153 * @see eu.etaxonomy.cdm.api.service.IService#refresh(eu.etaxonomy.cdm.model.common.ICdmBase, org.hibernate.LockMode, java.util.List)
156 public void refresh(TaxonBase t
, LockMode lockMode
, List
<String
> propertyPaths
) {
157 defaultTaxonService
.refresh(t
, lockMode
, propertyPaths
);
162 * @see eu.etaxonomy.cdm.api.service.IIdentifiableEntityService#updateTitleCache()
165 public void updateTitleCache() {
166 defaultTaxonService
.updateTitleCache();
172 * @see eu.etaxonomy.cdm.api.service.IVersionableService#getNextAuditEvent(eu.etaxonomy.cdm.model.common.VersionableEntity)
175 public AuditEventRecord
<TaxonBase
> getNextAuditEvent(TaxonBase t
) {
176 return defaultTaxonService
.getNextAuditEvent(t
);
180 * @param annotatableEntity
185 * @param propertyPaths
187 * @see eu.etaxonomy.cdm.api.service.IAnnotatableService#getMarkers(eu.etaxonomy.cdm.model.common.AnnotatableEntity, java.lang.Boolean, java.lang.Integer, java.lang.Integer, java.util.List, java.util.List)
190 public Pager
<Marker
> getMarkers(TaxonBase annotatableEntity
, Boolean technical
, Integer pageSize
, Integer pageNumber
, List
<OrderHint
> orderHints
, List
<String
> propertyPaths
) {
191 return defaultTaxonService
.getMarkers(annotatableEntity
, technical
, pageSize
, pageNumber
, orderHints
, propertyPaths
);
197 * @param cacheStrategy
199 * @see eu.etaxonomy.cdm.api.service.IIdentifiableEntityService#updateTitleCache(java.lang.Class, java.lang.Integer, eu.etaxonomy.cdm.strategy.cache.common.IIdentifiableEntityCacheStrategy, eu.etaxonomy.cdm.common.monitor.IProgressMonitor)
202 public void updateTitleCache(Class
<?
extends TaxonBase
> clazz
, Integer stepSize
, IIdentifiableEntityCacheStrategy
<TaxonBase
> cacheStrategy
, IProgressMonitor monitor
) {
203 defaultTaxonService
.updateTitleCache(clazz
, stepSize
, cacheStrategy
, monitor
);
209 * @see eu.etaxonomy.cdm.api.service.IVersionableService#getPreviousAuditEvent(eu.etaxonomy.cdm.model.common.VersionableEntity)
212 public AuditEventRecord
<TaxonBase
> getPreviousAuditEvent(TaxonBase t
) {
213 return defaultTaxonService
.getPreviousAuditEvent(t
);
219 * @see eu.etaxonomy.cdm.api.service.IService#count(java.lang.Class)
222 public int count(Class
<?
extends TaxonBase
> clazz
) {
223 return defaultTaxonService
.count(clazz
);
234 * @param propertyPaths
236 * @see eu.etaxonomy.cdm.api.service.IVersionableService#pageAuditEvents(java.lang.Class, eu.etaxonomy.cdm.model.view.AuditEvent, eu.etaxonomy.cdm.model.view.AuditEvent, java.util.List, java.lang.Integer, java.lang.Integer, eu.etaxonomy.cdm.persistence.dao.common.AuditEventSort, java.util.List)
239 public Pager
<AuditEventRecord
<TaxonBase
>> pageAuditEvents(Class
<?
extends TaxonBase
> clazz
, AuditEvent from
, AuditEvent to
, List
<AuditCriterion
> criteria
, Integer pageSize
, Integer pageValue
, AuditEventSort sort
, List
<String
> propertyPaths
) {
240 return defaultTaxonService
.pageAuditEvents(clazz
, from
, to
, criteria
, pageSize
, pageValue
, sort
, propertyPaths
);
246 * @see eu.etaxonomy.cdm.api.service.IIdentifiableEntityService#find(eu.etaxonomy.cdm.model.common.LSID)
249 public TaxonBase
find(LSID lsid
) {
250 return defaultTaxonService
.find(lsid
);
254 * @param persistentObject
256 * @see eu.etaxonomy.cdm.api.service.IService#delete(eu.etaxonomy.cdm.model.common.ICdmBase)
259 public String
delete(TaxonBase persistentObject
) {
260 return defaultTaxonService
.delete(persistentObject
);
268 * @param propertyPaths
270 * @see eu.etaxonomy.cdm.api.service.IAnnotatableService#groupMarkers(java.lang.Class, java.lang.Boolean, java.lang.Integer, java.lang.Integer, java.util.List)
273 public List
<Object
[]> groupMarkers(Class
<?
extends TaxonBase
> clazz
, Boolean technical
, Integer pageSize
, Integer pageNumber
, List
<String
> propertyPaths
) {
274 return defaultTaxonService
.groupMarkers(clazz
, technical
, pageSize
, pageNumber
, propertyPaths
);
280 * @see eu.etaxonomy.cdm.api.service.IService#exists(java.util.UUID)
283 public boolean exists(UUID uuid
) {
284 return defaultTaxonService
.exists(uuid
);
291 * @see eu.etaxonomy.cdm.api.service.ITaxonService#getAllSynonyms(int, int)
294 public List
<Synonym
> getAllSynonyms(int limit
, int start
) {
295 return defaultTaxonService
.getAllSynonyms(limit
, start
);
302 * @see eu.etaxonomy.cdm.api.service.IIdentifiableEntityService#replace(eu.etaxonomy.cdm.model.common.IdentifiableEntity, eu.etaxonomy.cdm.model.common.IdentifiableEntity)
305 public TaxonBase
replace(TaxonBase x
, TaxonBase y
) {
306 return defaultTaxonService
.replace(x
, y
);
313 * @see eu.etaxonomy.cdm.api.service.ITaxonService#getAllTaxa(int, int)
316 public List
<Taxon
> getAllTaxa(int limit
, int start
) {
317 return defaultTaxonService
.getAllTaxa(limit
, start
);
323 * @see eu.etaxonomy.cdm.api.service.IService#find(java.util.Set)
326 public List
<TaxonBase
> find(Set
<UUID
> uuidSet
) {
327 return defaultTaxonService
.find(uuidSet
);
334 * @param propertyPaths
336 * @see eu.etaxonomy.cdm.api.service.IIdentifiableEntityService#getSources(eu.etaxonomy.cdm.model.common.IdentifiableEntity, java.lang.Integer, java.lang.Integer, java.util.List)
339 public Pager
<IdentifiableSource
> getSources(TaxonBase t
, Integer pageSize
, Integer pageNumber
, List
<String
> propertyPaths
) {
340 return defaultTaxonService
.getSources(t
, pageSize
, pageNumber
, propertyPaths
);
346 * @param onlyWithChildren
349 * @see eu.etaxonomy.cdm.api.service.ITaxonService#getRootTaxa(eu.etaxonomy.cdm.model.reference.Reference, eu.etaxonomy.cdm.persistence.fetch.CdmFetch, boolean)
353 public List
<Taxon
> getRootTaxa(Reference sec
, CdmFetch cdmFetch
, boolean onlyWithChildren
) {
354 return defaultTaxonService
.getRootTaxa(sec
, cdmFetch
, onlyWithChildren
);
360 * @see eu.etaxonomy.cdm.api.service.IService#find(java.util.UUID)
363 public TaxonBase
find(UUID uuid
) {
364 return defaultTaxonService
.find(uuid
);
370 * @param onlyWithChildren
371 * @param withMisapplications
372 * @param propertyPaths
375 * @see eu.etaxonomy.cdm.api.service.ITaxonService#getRootTaxa(eu.etaxonomy.cdm.model.name.Rank, eu.etaxonomy.cdm.model.reference.Reference, boolean, boolean, java.util.List)
379 public List
<Taxon
> getRootTaxa(Rank rank
, Reference sec
, boolean onlyWithChildren
, boolean withMisapplications
, List
<String
> propertyPaths
) {
380 return defaultTaxonService
.getRootTaxa(rank
, sec
, onlyWithChildren
, withMisapplications
, propertyPaths
);
386 * @see eu.etaxonomy.cdm.api.service.IService#find(int)
389 public TaxonBase
find(int id
) {
390 return defaultTaxonService
.find(id
);
397 * @param propertyPaths
399 * @see eu.etaxonomy.cdm.api.service.IIdentifiableEntityService#getRights(eu.etaxonomy.cdm.model.common.IdentifiableEntity, java.lang.Integer, java.lang.Integer, java.util.List)
402 public Pager
<Rights
> getRights(TaxonBase t
, Integer pageSize
, Integer pageNumber
, List
<String
> propertyPaths
) {
403 return defaultTaxonService
.getRights(t
, pageSize
, pageNumber
, propertyPaths
);
410 * @see eu.etaxonomy.cdm.api.service.IAnnotatableService#countMarkers(java.lang.Class, java.lang.Boolean)
413 public int countMarkers(Class
<?
extends TaxonBase
> clazz
, Boolean technical
) {
414 return defaultTaxonService
.countMarkers(clazz
, technical
);
420 * @see eu.etaxonomy.cdm.api.service.IService#findById(java.util.Set)
423 public List
<TaxonBase
> findById(Set
<Integer
> idSet
) {
424 return defaultTaxonService
.findById(idSet
);
432 * @see eu.etaxonomy.cdm.api.service.IIdentifiableEntityService#getSourcedObjectByIdInSource(java.lang.Class, java.lang.String, java.lang.String)
435 public ISourceable
getSourcedObjectByIdInSource(Class clazz
, String idInSource
, String idNamespace
) {
436 return defaultTaxonService
.getSourcedObjectByIdInSource(clazz
, idInSource
, idNamespace
);
441 * @see eu.etaxonomy.cdm.api.service.IService#getSession()
444 public Session
getSession() {
445 return defaultTaxonService
.getSession();
450 * @see eu.etaxonomy.cdm.api.service.IIdentifiableEntityService#getUuidAndTitleCache()
453 public List
<UuidAndTitleCache
<TaxonBase
>> getUuidAndTitleCache() {
454 return defaultTaxonService
.getUuidAndTitleCache();
462 * @param propertyPaths
464 * @see eu.etaxonomy.cdm.api.service.IService#group(java.lang.Class, java.lang.Integer, java.lang.Integer, java.util.List, java.util.List)
467 public List
<Object
[]> group(Class
<?
extends TaxonBase
> clazz
, Integer limit
, Integer start
, List
<Grouping
> groups
, List
<String
> propertyPaths
) {
468 return defaultTaxonService
.group(clazz
, limit
, start
, groups
, propertyPaths
);
475 * @see eu.etaxonomy.cdm.api.service.ITaxonService#getAllRelationships(int, int)
478 public List
<RelationshipBase
> getAllRelationships(int limit
, int start
) {
479 return defaultTaxonService
.getAllRelationships(limit
, start
);
490 * @param propertyPaths
492 * @see eu.etaxonomy.cdm.api.service.IIdentifiableEntityService#findByTitle(java.lang.Class, java.lang.String, eu.etaxonomy.cdm.persistence.query.MatchMode, java.util.List, java.lang.Integer, java.lang.Integer, java.util.List, java.util.List)
495 public Pager
<TaxonBase
> findByTitle(Class
<?
extends TaxonBase
> clazz
, String queryString
, MatchMode matchmode
, List
<Criterion
> criteria
, Integer pageSize
, Integer pageNumber
, List
<OrderHint
> orderHints
, List
<String
> propertyPaths
) {
496 return defaultTaxonService
.findByTitle(clazz
, queryString
, matchmode
, criteria
, pageSize
, pageNumber
, orderHints
, propertyPaths
);
502 * @see eu.etaxonomy.cdm.api.service.ITaxonService#getTaxonRelationshipTypeVocabulary()
506 public OrderedTermVocabulary
<TaxonRelationshipType
> getTaxonRelationshipTypeVocabulary() {
507 return defaultTaxonService
.getTaxonRelationshipTypeVocabulary();
514 * @see eu.etaxonomy.cdm.api.service.ITaxonService#searchTaxaByName(java.lang.String, eu.etaxonomy.cdm.model.reference.Reference)
517 public List
<TaxonBase
> searchTaxaByName(String name
, Reference sec
) {
518 return defaultTaxonService
.searchTaxaByName(name
, sec
);
523 * @param acceptedTaxon
524 * @see eu.etaxonomy.cdm.api.service.ITaxonService#swapSynonymAndAcceptedTaxon(eu.etaxonomy.cdm.model.taxon.Synonym, eu.etaxonomy.cdm.model.taxon.Taxon)
527 public void swapSynonymAndAcceptedTaxon(Synonym synonym
, Taxon acceptedTaxon
) {
528 defaultTaxonService
.swapSynonymAndAcceptedTaxon(synonym
, acceptedTaxon
);
536 * @param propertyPaths
538 * @see eu.etaxonomy.cdm.api.service.IService#list(java.lang.Class, java.lang.Integer, java.lang.Integer, java.util.List, java.util.List)
541 public List
<TaxonBase
> list(Class
<?
extends TaxonBase
> type
, Integer limit
, Integer start
, List
<OrderHint
> orderHints
, List
<String
> propertyPaths
) {
542 return defaultTaxonService
.list(type
, limit
, start
, orderHints
, propertyPaths
);
546 * @param configurator
548 * @see eu.etaxonomy.cdm.api.service.IIdentifiableEntityService#findByTitle(eu.etaxonomy.cdm.api.service.config.IIdentifiableEntityServiceConfigurator)
551 public Pager
<TaxonBase
> findByTitle(IIdentifiableEntityServiceConfigurator
<TaxonBase
> configurator
) {
552 return defaultTaxonService
.findByTitle(configurator
);
557 * @param acceptedTaxon
558 * @param deleteSynonym
559 * @param copyCitationInfo
561 * @param microCitation
563 * @throws HomotypicalGroupChangeException
564 * @see eu.etaxonomy.cdm.api.service.ITaxonService#changeSynonymToAcceptedTaxon(eu.etaxonomy.cdm.model.taxon.Synonym, eu.etaxonomy.cdm.model.taxon.Taxon, boolean, boolean, eu.etaxonomy.cdm.model.reference.Reference, java.lang.String)
567 public Taxon
changeSynonymToAcceptedTaxon(Synonym synonym
, Taxon acceptedTaxon
, boolean deleteSynonym
, boolean copyCitationInfo
, Reference citation
, String microCitation
) throws HomotypicalGroupChangeException
{
568 return defaultTaxonService
.changeSynonymToAcceptedTaxon(synonym
, acceptedTaxon
, deleteSynonym
, copyCitationInfo
, citation
, microCitation
);
577 * @see eu.etaxonomy.cdm.api.service.IIdentifiableEntityService#countByTitle(java.lang.Class, java.lang.String, eu.etaxonomy.cdm.persistence.query.MatchMode, java.util.List)
580 public Integer
countByTitle(Class
<?
extends TaxonBase
> clazz
, String queryString
, MatchMode matchmode
, List
<Criterion
> criteria
) {
581 return defaultTaxonService
.countByTitle(clazz
, queryString
, matchmode
, criteria
);
587 * @see eu.etaxonomy.cdm.api.service.IService#load(java.util.UUID)
590 public TaxonBase
load(UUID uuid
) {
591 return defaultTaxonService
.load(uuid
);
596 * @param propertyPaths
598 * @see eu.etaxonomy.cdm.api.service.IService#load(java.util.UUID, java.util.List)
601 public TaxonBase
load(UUID uuid
, List
<String
> propertyPaths
) {
602 return defaultTaxonService
.load(uuid
, propertyPaths
);
606 * @param configurator
608 * @see eu.etaxonomy.cdm.api.service.IIdentifiableEntityService#countByTitle(eu.etaxonomy.cdm.api.service.config.IIdentifiableEntityServiceConfigurator)
611 public Integer
countByTitle(IIdentifiableEntityServiceConfigurator
<TaxonBase
> configurator
) {
612 return defaultTaxonService
.countByTitle(configurator
);
616 * @param transientObject
618 * @see eu.etaxonomy.cdm.api.service.IService#merge(eu.etaxonomy.cdm.model.common.ICdmBase)
621 public TaxonBase
merge(TaxonBase transientObject
) {
622 return defaultTaxonService
.merge(transientObject
);
633 * @param propertyPaths
635 * @see eu.etaxonomy.cdm.api.service.IIdentifiableEntityService#listByTitle(java.lang.Class, java.lang.String, eu.etaxonomy.cdm.persistence.query.MatchMode, java.util.List, java.lang.Integer, java.lang.Integer, java.util.List, java.util.List)
638 public List
<TaxonBase
> listByTitle(Class
<?
extends TaxonBase
> clazz
, String queryString
, MatchMode matchmode
, List
<Criterion
> criteria
, Integer pageSize
, Integer pageNumber
, List
<OrderHint
> orderHints
, List
<String
> propertyPaths
) {
639 return defaultTaxonService
.listByTitle(clazz
, queryString
, matchmode
, criteria
, pageSize
, pageNumber
, orderHints
, propertyPaths
);
647 * @param propertyPaths
649 * @see eu.etaxonomy.cdm.api.service.IService#page(java.lang.Class, java.lang.Integer, java.lang.Integer, java.util.List, java.util.List)
652 public Pager
<TaxonBase
> page(Class
<?
extends TaxonBase
> type
, Integer pageSize
, Integer pageNumber
, List
<OrderHint
> orderHints
, List
<String
> propertyPaths
) {
653 return defaultTaxonService
.page(type
, pageSize
, pageNumber
, orderHints
, propertyPaths
);
657 * @param persistentObject
659 * @see eu.etaxonomy.cdm.api.service.IService#refresh(eu.etaxonomy.cdm.model.common.ICdmBase)
662 public UUID
refresh(TaxonBase persistentObject
) {
663 return defaultTaxonService
.refresh(persistentObject
);
669 * @param taxonRelationshipType
671 * @param microReference
673 * @see eu.etaxonomy.cdm.api.service.ITaxonService#changeSynonymToRelatedTaxon(eu.etaxonomy.cdm.model.taxon.Synonym, eu.etaxonomy.cdm.model.taxon.Taxon, eu.etaxonomy.cdm.model.taxon.TaxonRelationshipType, eu.etaxonomy.cdm.model.reference.Reference, java.lang.String)
676 public Taxon
changeSynonymToRelatedTaxon(Synonym synonym
, Taxon toTaxon
, TaxonRelationshipType taxonRelationshipType
, Reference reference
, String microReference
) {
677 return defaultTaxonService
.changeSynonymToRelatedTaxon(synonym
, toTaxon
, taxonRelationshipType
, reference
, microReference
);
688 * @param propertyPaths
690 * @see eu.etaxonomy.cdm.api.service.IIdentifiableEntityService#listByReferenceTitle(java.lang.Class, java.lang.String, eu.etaxonomy.cdm.persistence.query.MatchMode, java.util.List, java.lang.Integer, java.lang.Integer, java.util.List, java.util.List)
693 public List
<TaxonBase
> listByReferenceTitle(Class
<?
extends TaxonBase
> clazz
, String queryString
, MatchMode matchmode
, List
<Criterion
> criteria
, Integer pageSize
, Integer pageNumber
, List
<OrderHint
> orderHints
, List
<String
> propertyPaths
) {
694 return defaultTaxonService
.listByReferenceTitle(clazz
, queryString
, matchmode
, criteria
, pageSize
, pageNumber
, orderHints
, propertyPaths
);
702 * @see eu.etaxonomy.cdm.api.service.IService#rows(java.lang.String, int, int)
705 public List
<TaxonBase
> rows(String tableName
, int limit
, int start
) {
706 return defaultTaxonService
.rows(tableName
, limit
, start
);
710 * @param newInstances
712 * @see eu.etaxonomy.cdm.api.service.IService#save(java.util.Collection)
715 public Map
<UUID
, TaxonBase
> save(Collection
<TaxonBase
> newInstances
) {
723 * @see eu.etaxonomy.cdm.api.service.ITaxonService#deleteSynonymRelationships(eu.etaxonomy.cdm.model.taxon.Synonym, eu.etaxonomy.cdm.model.taxon.Taxon)
726 public long deleteSynonymRelationships(Synonym syn
, Taxon taxon
) {
727 return defaultTaxonService
.deleteSynonymRelationships(syn
, taxon
);
733 * @see eu.etaxonomy.cdm.api.service.IService#save(eu.etaxonomy.cdm.model.common.ICdmBase)
736 public UUID
save(TaxonBase newInstance
) {
741 * @param transientObject
743 * @see eu.etaxonomy.cdm.api.service.IService#saveOrUpdate(eu.etaxonomy.cdm.model.common.ICdmBase)
746 public UUID
saveOrUpdate(TaxonBase transientObject
) {
752 * @param newHomotypicalGroup
754 * @param removeFromOtherTaxa
755 * @param setBasionymRelationIfApplicable
756 * @see eu.etaxonomy.cdm.api.service.ITaxonService#changeHomotypicalGroupOfSynonym(eu.etaxonomy.cdm.model.taxon.Synonym, eu.etaxonomy.cdm.model.name.HomotypicalGroup, eu.etaxonomy.cdm.model.taxon.Taxon, boolean, boolean)
759 public void changeHomotypicalGroupOfSynonym(Synonym synonym
, HomotypicalGroup newHomotypicalGroup
, Taxon targetTaxon
, boolean removeFromOtherTaxa
, boolean setBasionymRelationIfApplicable
) {
760 defaultTaxonService
.changeHomotypicalGroupOfSynonym(synonym
, newHomotypicalGroup
, targetTaxon
, removeFromOtherTaxa
, setBasionymRelationIfApplicable
);
764 * @param transientObjects
766 * @see eu.etaxonomy.cdm.api.service.IService#saveOrUpdate(java.util.Collection)
769 public Map
<UUID
, TaxonBase
> saveOrUpdate(Collection
<TaxonBase
> transientObjects
) {
774 * @param transientObject
776 * @see eu.etaxonomy.cdm.api.service.IService#update(eu.etaxonomy.cdm.model.common.ICdmBase)
779 public UUID
update(TaxonBase transientObject
) {
780 return defaultTaxonService
.update(transientObject
);
785 * @param includeProperties
789 * @param propertyPaths
791 * @see eu.etaxonomy.cdm.api.service.IService#list(eu.etaxonomy.cdm.model.common.ICdmBase, java.util.Set, java.lang.Integer, java.lang.Integer, java.util.List, java.util.List)
794 public List
<TaxonBase
> list(TaxonBase example
, Set
<String
> includeProperties
, Integer limit
, Integer start
, List
<OrderHint
> orderHints
, List
<String
> propertyPaths
) {
795 return defaultTaxonService
.list(example
, includeProperties
, limit
, start
, orderHints
, propertyPaths
);
799 * @param oldSynonymRelation
801 * @param moveHomotypicGroup
802 * @param newSynonymRelationshipType
803 * @param newReference
804 * @param newReferenceDetail
805 * @param keepReference
807 * @throws HomotypicalGroupChangeException
808 * @see eu.etaxonomy.cdm.api.service.ITaxonService#moveSynonymToAnotherTaxon(eu.etaxonomy.cdm.model.taxon.SynonymRelationship, eu.etaxonomy.cdm.model.taxon.Taxon, boolean, eu.etaxonomy.cdm.model.taxon.SynonymRelationshipType, eu.etaxonomy.cdm.model.reference.Reference, java.lang.String, boolean)
811 public SynonymRelationship
moveSynonymToAnotherTaxon(SynonymRelationship oldSynonymRelation
, Taxon newTaxon
, boolean moveHomotypicGroup
, SynonymRelationshipType newSynonymRelationshipType
, Reference newReference
, String newReferenceDetail
, boolean keepReference
) throws HomotypicalGroupChangeException
{
812 return defaultTaxonService
.moveSynonymToAnotherTaxon(oldSynonymRelation
, newTaxon
, moveHomotypicGroup
, newSynonymRelationshipType
, newReference
, newReferenceDetail
, keepReference
);
817 * @param matchStrategy
818 * @param mergeStrategy
820 * @see eu.etaxonomy.cdm.api.service.IIdentifiableEntityService#deduplicate(java.lang.Class, eu.etaxonomy.cdm.strategy.match.IMatchStrategy, eu.etaxonomy.cdm.strategy.merge.IMergeStrategy)
823 public int deduplicate(Class
<?
extends TaxonBase
> clazz
, IMatchStrategy matchStrategy
, IMergeStrategy mergeStrategy
) {
824 return defaultTaxonService
.deduplicate(clazz
, matchStrategy
, mergeStrategy
);
835 * @see eu.etaxonomy.cdm.api.service.IIdentifiableEntityService#findTitleCache(java.lang.Class, java.lang.String, java.lang.Integer, java.lang.Integer, java.util.List, eu.etaxonomy.cdm.persistence.query.MatchMode)
838 public Pager
<TaxonBase
> findTitleCache(Class
<?
extends TaxonBase
> clazz
, String queryString
, Integer pageSize
, Integer pageNumber
, List
<OrderHint
> orderHints
, MatchMode matchMode
) {
839 return defaultTaxonService
.findTitleCache(clazz
, queryString
, pageSize
, pageNumber
, orderHints
, matchMode
);
848 * @param propertyPaths
850 * @see eu.etaxonomy.cdm.api.service.ITaxonService#listToTaxonRelationships(eu.etaxonomy.cdm.model.taxon.Taxon, eu.etaxonomy.cdm.model.taxon.TaxonRelationshipType, java.lang.Integer, java.lang.Integer, java.util.List, java.util.List)
853 public List
<TaxonRelationship
> listToTaxonRelationships(Taxon taxon
, TaxonRelationshipType type
, Integer pageSize
, Integer pageNumber
, List
<OrderHint
> orderHints
, List
<String
> propertyPaths
) {
854 return defaultTaxonService
.listToTaxonRelationships(taxon
, type
, pageSize
, pageNumber
, orderHints
, propertyPaths
);
863 * @param propertyPaths
865 * @see eu.etaxonomy.cdm.api.service.ITaxonService#pageToTaxonRelationships(eu.etaxonomy.cdm.model.taxon.Taxon, eu.etaxonomy.cdm.model.taxon.TaxonRelationshipType, java.lang.Integer, java.lang.Integer, java.util.List, java.util.List)
868 public Pager
<TaxonRelationship
> pageToTaxonRelationships(Taxon taxon
, TaxonRelationshipType type
, Integer pageSize
, Integer pageNumber
, List
<OrderHint
> orderHints
, List
<String
> propertyPaths
) {
869 return defaultTaxonService
.pageToTaxonRelationships(taxon
, type
, pageSize
, pageNumber
, orderHints
, propertyPaths
);
878 * @param propertyPaths
880 * @see eu.etaxonomy.cdm.api.service.ITaxonService#listFromTaxonRelationships(eu.etaxonomy.cdm.model.taxon.Taxon, eu.etaxonomy.cdm.model.taxon.TaxonRelationshipType, java.lang.Integer, java.lang.Integer, java.util.List, java.util.List)
883 public List
<TaxonRelationship
> listFromTaxonRelationships(Taxon taxon
, TaxonRelationshipType type
, Integer pageSize
, Integer pageNumber
, List
<OrderHint
> orderHints
, List
<String
> propertyPaths
) {
884 return defaultTaxonService
.listFromTaxonRelationships(taxon
, type
, pageSize
, pageNumber
, orderHints
, propertyPaths
);
893 * @param propertyPaths
895 * @see eu.etaxonomy.cdm.api.service.ITaxonService#pageFromTaxonRelationships(eu.etaxonomy.cdm.model.taxon.Taxon, eu.etaxonomy.cdm.model.taxon.TaxonRelationshipType, java.lang.Integer, java.lang.Integer, java.util.List, java.util.List)
898 public Pager
<TaxonRelationship
> pageFromTaxonRelationships(Taxon taxon
, TaxonRelationshipType type
, Integer pageSize
, Integer pageNumber
, List
<OrderHint
> orderHints
, List
<String
> propertyPaths
) {
899 return defaultTaxonService
.pageFromTaxonRelationships(taxon
, type
, pageSize
, pageNumber
, orderHints
, propertyPaths
);
904 * @param includeRelationships
908 * @param propertyPaths
910 * @see eu.etaxonomy.cdm.api.service.ITaxonService#listRelatedTaxa(eu.etaxonomy.cdm.model.taxon.Taxon, java.util.Set, java.lang.Integer, java.lang.Integer, java.lang.Integer, java.util.List)
913 public Set
<Taxon
> listRelatedTaxa(Taxon taxon
, Set
<TaxonRelationshipEdge
> includeRelationships
, Integer maxDepth
, Integer limit
, Integer start
, List
<String
> propertyPaths
) {
914 return defaultTaxonService
.listRelatedTaxa(taxon
, includeRelationships
, maxDepth
, limit
, start
, propertyPaths
);
921 * @param propertyPaths
923 * @see eu.etaxonomy.cdm.api.service.ITaxonService#listClassifications(eu.etaxonomy.cdm.model.taxon.TaxonBase, java.lang.Integer, java.lang.Integer, java.util.List)
926 public List
<Classification
> listClassifications(TaxonBase taxonBase
, Integer limit
, Integer start
, List
<String
> propertyPaths
) {
927 return defaultTaxonService
.listClassifications(taxonBase
, limit
, start
, propertyPaths
);
936 * @param propertyPaths
938 * @see eu.etaxonomy.cdm.api.service.ITaxonService#getSynonyms(eu.etaxonomy.cdm.model.taxon.Synonym, eu.etaxonomy.cdm.model.taxon.SynonymRelationshipType, java.lang.Integer, java.lang.Integer, java.util.List, java.util.List)
941 public Pager
<SynonymRelationship
> getSynonyms(Synonym synonym
, SynonymRelationshipType type
, Integer pageSize
, Integer pageNumber
, List
<OrderHint
> orderHints
, List
<String
> propertyPaths
) {
942 return defaultTaxonService
.getSynonyms(synonym
, type
, pageSize
, pageNumber
, orderHints
, propertyPaths
);
951 * @param propertyPaths
953 * @see eu.etaxonomy.cdm.api.service.ITaxonService#getSynonyms(eu.etaxonomy.cdm.model.taxon.Taxon, eu.etaxonomy.cdm.model.taxon.SynonymRelationshipType, java.lang.Integer, java.lang.Integer, java.util.List, java.util.List)
956 public Pager
<SynonymRelationship
> getSynonyms(Taxon taxon
, SynonymRelationshipType type
, Integer pageSize
, Integer pageNumber
, List
<OrderHint
> orderHints
, List
<String
> propertyPaths
) {
957 return defaultTaxonService
.getSynonyms(taxon
, type
, pageSize
, pageNumber
, orderHints
, propertyPaths
);
962 * @param propertyPaths
964 * @see eu.etaxonomy.cdm.api.service.ITaxonService#getHomotypicSynonymsByHomotypicGroup(eu.etaxonomy.cdm.model.taxon.Taxon, java.util.List)
967 public List
<Synonym
> getHomotypicSynonymsByHomotypicGroup(Taxon taxon
, List
<String
> propertyPaths
) {
968 return defaultTaxonService
.getHomotypicSynonymsByHomotypicGroup(taxon
, propertyPaths
);
973 * @param propertyPaths
975 * @see eu.etaxonomy.cdm.api.service.ITaxonService#getHeterotypicSynonymyGroups(eu.etaxonomy.cdm.model.taxon.Taxon, java.util.List)
978 public List
<List
<Synonym
>> getHeterotypicSynonymyGroups(Taxon taxon
, List
<String
> propertyPaths
) {
979 return defaultTaxonService
.getHeterotypicSynonymyGroups(taxon
, propertyPaths
);
988 * @param propertyPaths
990 * @see eu.etaxonomy.cdm.api.service.ITaxonService#search(java.lang.Class, java.lang.String, java.lang.Integer, java.lang.Integer, java.util.List, java.util.List)
993 public Pager
<TaxonBase
> search(Class
<?
extends TaxonBase
> clazz
, String queryString
, Integer pageSize
, Integer pageNumber
, List
<OrderHint
> orderHints
, List
<String
> propertyPaths
) {
994 return defaultTaxonService
.search(clazz
, queryString
, pageSize
, pageNumber
, orderHints
, propertyPaths
);
1000 * @param infragenericEpithet
1001 * @param specificEpithet
1002 * @param infraspecificEpithet
1007 * @see eu.etaxonomy.cdm.api.service.ITaxonService#findTaxaByName(java.lang.Class, java.lang.String, java.lang.String, java.lang.String, java.lang.String, eu.etaxonomy.cdm.model.name.Rank, java.lang.Integer, java.lang.Integer)
1010 public Pager
<TaxonBase
> findTaxaByName(Class
<?
extends TaxonBase
> clazz
, String uninomial
, String infragenericEpithet
, String specificEpithet
, String infraspecificEpithet
, Rank rank
, Integer pageSize
, Integer pageNumber
) {
1011 return defaultTaxonService
.findTaxaByName(clazz
, uninomial
, infragenericEpithet
, specificEpithet
, infraspecificEpithet
, rank
, pageSize
, pageNumber
);
1017 * @param infragenericEpithet
1018 * @param specificEpithet
1019 * @param infraspecificEpithet
1024 * @see eu.etaxonomy.cdm.api.service.ITaxonService#listTaxaByName(java.lang.Class, java.lang.String, java.lang.String, java.lang.String, java.lang.String, eu.etaxonomy.cdm.model.name.Rank, java.lang.Integer, java.lang.Integer)
1027 public List
<TaxonBase
> listTaxaByName(Class
<?
extends TaxonBase
> clazz
, String uninomial
, String infragenericEpithet
, String specificEpithet
, String infraspecificEpithet
, Rank rank
, Integer pageSize
, Integer pageNumber
) {
1028 return defaultTaxonService
.listTaxaByName(clazz
, uninomial
, infragenericEpithet
, specificEpithet
, infraspecificEpithet
, rank
, pageSize
, pageNumber
);
1032 * @param configurator
1034 * @see eu.etaxonomy.cdm.api.service.ITaxonService#findTaxaAndNames(eu.etaxonomy.cdm.api.service.config.IFindTaxaAndNamesConfigurator)
1037 public Pager
<IdentifiableEntity
> findTaxaAndNames(IFindTaxaAndNamesConfigurator configurator
) {
1038 return defaultTaxonService
.findTaxaAndNames(configurator
);
1042 * @param queryString
1043 * @param classification
1045 * @param highlightFragments
1049 * @param propertyPaths
1051 * @throws CorruptIndexException
1052 * @throws IOException
1053 * @throws ParseException
1054 * @throws LuceneMultiSearchException
1056 * @see eu.etaxonomy.cdm.api.service.ITaxonService#findByEverythingFullText(java.lang.String, eu.etaxonomy.cdm.model.taxon.Classification, java.util.List, boolean, java.lang.Integer, java.lang.Integer, java.util.List, java.util.List)
1060 public Pager
<SearchResult
<TaxonBase
>> findByEverythingFullText(String queryString
, Classification classification
, List
<Language
> languages
, boolean highlightFragments
, Integer pageSize
, Integer pageNumber
, List
<OrderHint
> orderHints
, List
<String
> propertyPaths
) throws CorruptIndexException
, IOException
, ParseException
, LuceneMultiSearchException
{
1061 return defaultTaxonService
.findByEverythingFullText(queryString
, classification
, languages
, highlightFragments
, pageSize
, pageNumber
, orderHints
, propertyPaths
);
1066 * @param queryString
1067 * @param classification
1069 * @param highlightFragments
1073 * @param propertyPaths
1075 * @throws CorruptIndexException
1076 * @throws IOException
1077 * @throws ParseException
1078 * @see eu.etaxonomy.cdm.api.service.ITaxonService#findByFullText(java.lang.Class, java.lang.String, eu.etaxonomy.cdm.model.taxon.Classification, java.util.List, boolean, java.lang.Integer, java.lang.Integer, java.util.List, java.util.List)
1081 public Pager
<SearchResult
<TaxonBase
>> findByFullText(Class
<?
extends TaxonBase
> clazz
, String queryString
, Classification classification
, List
<Language
> languages
, boolean highlightFragments
, Integer pageSize
, Integer pageNumber
, List
<OrderHint
> orderHints
, List
<String
> propertyPaths
) throws CorruptIndexException
, IOException
, ParseException
{
1082 return defaultTaxonService
.findByFullText(clazz
, queryString
, classification
, languages
, highlightFragments
, pageSize
, pageNumber
, orderHints
, propertyPaths
);
1087 * @param statusFilter
1088 * @param classification
1092 * @param propertyPaths
1094 * @throws IOException
1095 * @throws ParseException
1096 * @see eu.etaxonomy.cdm.api.service.ITaxonService#findByDistribution(java.util.List, java.util.List, eu.etaxonomy.cdm.model.taxon.Classification, java.lang.Integer, java.lang.Integer, java.util.List, java.util.List)
1099 public Pager
<SearchResult
<TaxonBase
>> findByDistribution(List
<NamedArea
> areaFilter
, List
<PresenceAbsenceTermBase
<?
>> statusFilter
, Classification classification
, Integer pageSize
, Integer pageNumber
, List
<OrderHint
> orderHints
, List
<String
> propertyPaths
) throws IOException
, ParseException
{
1100 return defaultTaxonService
.findByDistribution(areaFilter
, statusFilter
, classification
, pageSize
, pageNumber
, orderHints
, propertyPaths
);
1104 * @param searchModes
1105 * @param queryString
1106 * @param classification
1108 * @param distributionStatus
1110 * @param highlightFragments
1114 * @param propertyPaths
1116 * @throws CorruptIndexException
1117 * @throws IOException
1118 * @throws ParseException
1119 * @throws LuceneMultiSearchException
1120 * @see eu.etaxonomy.cdm.api.service.ITaxonService#findTaxaAndNamesByFullText(java.util.EnumSet, java.lang.String, eu.etaxonomy.cdm.model.taxon.Classification, java.util.Set, java.util.Set, java.util.List, boolean, java.lang.Integer, java.lang.Integer, java.util.List, java.util.List)
1123 public Pager
<SearchResult
<TaxonBase
>> findTaxaAndNamesByFullText(EnumSet
<TaxaAndNamesSearchMode
> searchModes
, String queryString
, Classification classification
, Set
<NamedArea
> namedAreas
, Set
<PresenceAbsenceTermBase
<?
>> distributionStatus
, List
<Language
> languages
, boolean highlightFragments
, Integer pageSize
, Integer pageNumber
, List
<OrderHint
> orderHints
, List
<String
> propertyPaths
) throws CorruptIndexException
, IOException
, ParseException
, LuceneMultiSearchException
{
1124 return defaultTaxonService
.findTaxaAndNamesByFullText(searchModes
, queryString
, classification
, namedAreas
, distributionStatus
, languages
, highlightFragments
, pageSize
, pageNumber
, orderHints
, propertyPaths
);
1129 * @param queryString
1130 * @param classification
1133 * @param highlightFragments
1137 * @param propertyPaths
1139 * @throws CorruptIndexException
1140 * @throws IOException
1141 * @throws ParseException
1142 * @see eu.etaxonomy.cdm.api.service.ITaxonService#findByDescriptionElementFullText(java.lang.Class, java.lang.String, eu.etaxonomy.cdm.model.taxon.Classification, java.util.List, java.util.List, boolean, java.lang.Integer, java.lang.Integer, java.util.List, java.util.List)
1145 public Pager
<SearchResult
<TaxonBase
>> findByDescriptionElementFullText(Class
<?
extends DescriptionElementBase
> clazz
, String queryString
, Classification classification
, List
<Feature
> features
, List
<Language
> languages
, boolean highlightFragments
, Integer pageSize
, Integer pageNumber
, List
<OrderHint
> orderHints
, List
<String
> propertyPaths
) throws CorruptIndexException
, IOException
, ParseException
{
1146 return defaultTaxonService
.findByDescriptionElementFullText(clazz
, queryString
, classification
, features
, languages
, highlightFragments
, pageSize
, pageNumber
, orderHints
, propertyPaths
);
1153 * @param widthOrDuration
1157 * @see eu.etaxonomy.cdm.api.service.ITaxonService#getAllMedia(eu.etaxonomy.cdm.model.taxon.Taxon, int, int, int, java.lang.String[])
1161 public List
<MediaRepresentation
> getAllMedia(Taxon taxon
, int size
, int height
, int widthOrDuration
, String
[] mimeTypes
) {
1162 return defaultTaxonService
.getAllMedia(taxon
, size
, height
, widthOrDuration
, mimeTypes
);
1167 * @param includeRelationships
1168 * @param limitToGalleries
1169 * @param propertyPath
1172 * @see eu.etaxonomy.cdm.api.service.ITaxonService#listTaxonDescriptionMedia(eu.etaxonomy.cdm.model.taxon.Taxon, java.util.Set, boolean, java.util.List)
1176 public List
<Media
> listTaxonDescriptionMedia(Taxon taxon
, Set
<TaxonRelationshipEdge
> includeRelationships
, boolean limitToGalleries
, List
<String
> propertyPath
) {
1177 return defaultTaxonService
.listTaxonDescriptionMedia(taxon
, includeRelationships
, limitToGalleries
, propertyPath
);
1182 * @param includeRelationships
1183 * @param limitToGalleries
1184 * @param includeTaxonDescriptions
1185 * @param includeOccurrences
1186 * @param includeTaxonNameDescriptions
1187 * @param propertyPath
1189 * @see eu.etaxonomy.cdm.api.service.ITaxonService#listMedia(eu.etaxonomy.cdm.model.taxon.Taxon, java.util.Set, java.lang.Boolean, java.lang.Boolean, java.lang.Boolean, java.lang.Boolean, java.util.List)
1192 public List
<Media
> listMedia(Taxon taxon
, Set
<TaxonRelationshipEdge
> includeRelationships
, Boolean limitToGalleries
, Boolean includeTaxonDescriptions
, Boolean includeOccurrences
, Boolean includeTaxonNameDescriptions
, List
<String
> propertyPath
) {
1193 return defaultTaxonService
.listMedia(taxon
, includeRelationships
, limitToGalleries
, includeTaxonDescriptions
, includeOccurrences
, includeTaxonNameDescriptions
, propertyPath
);
1199 * @see eu.etaxonomy.cdm.api.service.ITaxonService#findTaxaByID(java.util.Set)
1202 public List
<TaxonBase
> findTaxaByID(Set
<Integer
> listOfIDs
) {
1203 return defaultTaxonService
.findTaxaByID(listOfIDs
);
1208 * @param propertyPaths
1210 * @see eu.etaxonomy.cdm.api.service.ITaxonService#findTaxonByUuid(java.util.UUID, java.util.List)
1213 public TaxonBase
findTaxonByUuid(UUID uuid
, List
<String
> propertyPaths
) {
1214 return defaultTaxonService
.findTaxonByUuid(uuid
, propertyPaths
);
1219 * @see eu.etaxonomy.cdm.api.service.ITaxonService#countAllRelationships()
1222 public int countAllRelationships() {
1223 return defaultTaxonService
.countAllRelationships();
1227 * @param propertyPath
1229 * @see eu.etaxonomy.cdm.api.service.ITaxonService#findIdenticalTaxonNames(java.util.List)
1232 public List
<TaxonNameBase
> findIdenticalTaxonNames(List
<String
> propertyPath
) {
1233 return defaultTaxonService
.findIdenticalTaxonNames(propertyPath
);
1237 * @param propertyPath
1239 * @see eu.etaxonomy.cdm.api.service.ITaxonService#findIdenticalTaxonNameIds(java.util.List)
1242 public List
<TaxonNameBase
> findIdenticalTaxonNameIds(List
<String
> propertyPath
) {
1243 return defaultTaxonService
.findIdenticalTaxonNameIds(propertyPath
);
1249 * @see eu.etaxonomy.cdm.api.service.ITaxonService#getPhylumName(eu.etaxonomy.cdm.model.name.TaxonNameBase)
1252 public String
getPhylumName(TaxonNameBase name
) {
1253 return defaultTaxonService
.getPhylumName(name
);
1259 * @see eu.etaxonomy.cdm.api.service.ITaxonService#deleteSynonymRelationships(eu.etaxonomy.cdm.model.taxon.Synonym)
1262 public long deleteSynonymRelationships(Synonym syn
) {
1263 return defaultTaxonService
.deleteSynonymRelationships(syn
);
1272 * @param propertyPaths
1275 * @see eu.etaxonomy.cdm.api.service.ITaxonService#listSynonymRelationships(eu.etaxonomy.cdm.model.taxon.TaxonBase, eu.etaxonomy.cdm.model.taxon.SynonymRelationshipType, java.lang.Integer, java.lang.Integer, java.util.List, java.util.List, eu.etaxonomy.cdm.model.common.RelationshipBase.Direction)
1278 public List
<SynonymRelationship
> listSynonymRelationships(TaxonBase taxonBase
, SynonymRelationshipType type
, Integer pageSize
, Integer pageNumber
, List
<OrderHint
> orderHints
, List
<String
> propertyPaths
, Direction direction
) {
1279 return defaultTaxonService
.listSynonymRelationships(taxonBase
, type
, pageSize
, pageNumber
, orderHints
, propertyPaths
, direction
);
1285 * @see eu.etaxonomy.cdm.api.service.ITaxonService#findBestMatchingTaxon(java.lang.String)
1288 public Taxon
findBestMatchingTaxon(String taxonName
) {
1289 return defaultTaxonService
.findBestMatchingTaxon(taxonName
);
1295 * @see eu.etaxonomy.cdm.api.service.ITaxonService#findBestMatchingTaxon(eu.etaxonomy.cdm.api.service.config.MatchingTaxonConfigurator)
1298 public Taxon
findBestMatchingTaxon(MatchingTaxonConfigurator config
) {
1299 return defaultTaxonService
.findBestMatchingTaxon(config
);
1305 * @see eu.etaxonomy.cdm.api.service.ITaxonService#findBestMatchingSynonym(java.lang.String)
1308 public Synonym
findBestMatchingSynonym(String taxonName
) {
1309 return defaultTaxonService
.findBestMatchingSynonym(taxonName
);
1314 * @see eu.etaxonomy.cdm.api.service.ITaxonService#getUuidAndTitleCacheTaxon()
1317 public List
<UuidAndTitleCache
<TaxonBase
>> getUuidAndTitleCacheTaxon() {
1318 return defaultTaxonService
.getUuidAndTitleCacheTaxon();
1323 * @see eu.etaxonomy.cdm.api.service.ITaxonService#getUuidAndTitleCacheSynonym()
1326 public List
<UuidAndTitleCache
<TaxonBase
>> getUuidAndTitleCacheSynonym() {
1327 return defaultTaxonService
.getUuidAndTitleCacheSynonym();
1331 * @param configurator
1333 * @see eu.etaxonomy.cdm.api.service.ITaxonService#findTaxaAndNamesForEditor(eu.etaxonomy.cdm.api.service.config.IFindTaxaAndNamesConfigurator)
1336 public List
<UuidAndTitleCache
<TaxonBase
>> findTaxaAndNamesForEditor(IFindTaxaAndNamesConfigurator configurator
) {
1337 return defaultTaxonService
.findTaxaAndNamesForEditor(configurator
);
1344 * @param doWithMisappliedNames
1346 * @see eu.etaxonomy.cdm.api.service.ITaxonService#createInferredSynonyms(eu.etaxonomy.cdm.model.taxon.Taxon, eu.etaxonomy.cdm.model.taxon.Classification, eu.etaxonomy.cdm.model.taxon.SynonymRelationshipType, boolean)
1349 public List
<Synonym
> createInferredSynonyms(Taxon taxon
, Classification tree
, SynonymRelationshipType type
, boolean doWithMisappliedNames
) {
1350 return defaultTaxonService
.createInferredSynonyms(taxon
, tree
, type
, doWithMisappliedNames
);
1356 * @param doWithMisappliedNames
1358 * @see eu.etaxonomy.cdm.api.service.ITaxonService#createAllInferredSynonyms(eu.etaxonomy.cdm.model.taxon.Taxon, eu.etaxonomy.cdm.model.taxon.Classification, boolean)
1361 public List
<Synonym
> createAllInferredSynonyms(Taxon taxon
, Classification tree
, boolean doWithMisappliedNames
) {
1362 return defaultTaxonService
.createAllInferredSynonyms(taxon
, tree
, doWithMisappliedNames
);
1366 * @see eu.etaxonomy.cdm.api.service.ITaxonService#deleteSynonym(eu.etaxonomy.cdm.model.taxon.Synonym, eu.etaxonomy.cdm.api.service.config.SynonymDeletionConfigurator)
1369 public String
deleteSynonym(Synonym arg0
, SynonymDeletionConfigurator arg1
) {
1370 return defaultTaxonService
.deleteSynonym(arg0
, arg1
);
1374 * @see eu.etaxonomy.cdm.api.service.ITaxonService#deleteSynonym(eu.etaxonomy.cdm.model.taxon.Synonym, eu.etaxonomy.cdm.model.taxon.Taxon, eu.etaxonomy.cdm.api.service.config.SynonymDeletionConfigurator)
1377 public String
deleteSynonym(Synonym arg0
, Taxon arg1
, SynonymDeletionConfigurator arg2
) {
1378 return defaultTaxonService
.deleteSynonym(arg0
, arg1
, arg2
);
1382 * @see eu.etaxonomy.cdm.api.service.ITaxonService#deleteTaxon(eu.etaxonomy.cdm.model.taxon.Taxon, eu.etaxonomy.cdm.api.service.config.TaxonDeletionConfigurator, eu.etaxonomy.cdm.model.taxon.Classification)
1385 public String
deleteTaxon(Taxon arg0
, TaxonDeletionConfigurator arg1
, Classification arg2
) {
1386 return defaultTaxonService
.deleteTaxon(arg0
, arg1
, arg2
);
1390 * @see eu.etaxonomy.cdm.api.service.ITaxonService#getSynonymsByHomotypicGroup(eu.etaxonomy.cdm.model.taxon.Taxon, java.util.List)
1393 public List
<List
<Synonym
>> getSynonymsByHomotypicGroup(Taxon taxon
, List
<String
> propertyPaths
) {
1394 return defaultTaxonService
.getSynonymsByHomotypicGroup(taxon
, propertyPaths
);
1398 public Synonym
changeRelatedTaxonToSynonym(Taxon fromTaxon
, Taxon toTaxon
,
1399 TaxonRelationshipType oldRelationshipType
,
1400 SynonymRelationshipType synonymRelationshipType
)
1401 throws DataChangeNoRollbackException
{
1403 return defaultTaxonService
.changeRelatedTaxonToSynonym(fromTaxon
, toTaxon
, oldRelationshipType
, synonymRelationshipType
);
1407 * @see eu.etaxonomy.cdm.api.service.ITaxonService#pageAcceptedTaxaFor(java.util.UUID, java.util.UUID, java.lang.Integer, java.lang.Integer, java.util.List, java.util.List)
1410 public Pager
<Taxon
> pageAcceptedTaxaFor(UUID synonymUuid
, UUID classificationUuid
, Integer pageSize
,
1411 Integer pageNumber
, List
<OrderHint
> orderHints
, List
<String
> propertyPaths
) {
1412 return defaultTaxonService
.pageAcceptedTaxaFor(synonymUuid
, classificationUuid
, pageSize
, pageNumber
, orderHints
, propertyPaths
);
1416 * @see eu.etaxonomy.cdm.api.service.ITaxonService#listAcceptedTaxaFor(java.util.UUID, java.util.UUID, java.lang.Integer, java.lang.Integer, java.util.List, java.util.List)
1419 public List
<Taxon
> listAcceptedTaxaFor(UUID synonymUuid
, UUID classificationUuid
, Integer pageSize
,
1420 Integer pageNumber
, List
<OrderHint
> orderHints
, List
<String
> propertyPaths
) {
1421 return defaultTaxonService
.listAcceptedTaxaFor(synonymUuid
, classificationUuid
, pageSize
, pageNumber
, orderHints
, propertyPaths
);
1425 public List
<String
> isDeletable(TaxonBase object
,
1426 DeleteConfiguratorBase config
) {
1427 // TODO Auto-generated method stub