eu.etaxonomy.taxeditor.store/src/main/java/eu/etaxonomy/taxeditor/view/dataimport/SpecimenImportView.java

   1 // $Id$
   2 /**
   3 * Copyright (C) 2014 EDIT
   4 * European Distributed Institute of Taxonomy
   5 * http://www.e-taxonomy.eu
   6 *
   7 * The contents of this file are subject to the Mozilla Public License Version 1.1
   8 * See LICENSE.TXT at the top of this package for the full license terms.
   9 */
  10 package eu.etaxonomy.taxeditor.view.dataimport;
  11
  12 import java.io.IOException;
  13 import java.io.InputStream;
  14 import java.net.URI;
  15 import java.util.ArrayList;
  16 import java.util.Collection;
  17
  18 import org.apache.http.client.ClientProtocolException;
  19 import org.eclipse.core.runtime.jobs.Job;
  20
  21 import eu.etaxonomy.cdm.ext.occurrence.bioCase.BioCaseQueryServiceWrapper;
  22 import eu.etaxonomy.cdm.io.common.CdmDefaultImport;
  23 import eu.etaxonomy.cdm.io.common.IImportConfigurator.SOURCE_TYPE;
  24 import eu.etaxonomy.cdm.io.specimen.abcd206.in.Abcd206ImportConfigurator;
  25 import eu.etaxonomy.cdm.model.occurrence.SpecimenOrObservationBase;
  26 import eu.etaxonomy.taxeditor.store.CdmStore;
  27
  28 /**
  29  * @author pplitzner
  30  * @date Sep 3, 2014
  31  *
  32  */
  33 public class SpecimenImportView extends DataImportView<SpecimenOrObservationBase<?>> {
  34
  35     public static final String ID = "eu.etaxonomy.taxeditor.view.dataimport.SpecimenImportView"; //$NON-NLS-1$
  36
  37     private URI endPoint;
  38
  39     public SpecimenImportView() {
  40     }
  41
  42     /**
  43      * @param endPoint
  44      */
  45     public void setEndpoint(URI endPoint) {
  46         this.endPoint = endPoint;
  47     }
  48
  49     /* (non-Javadoc)
  50      * @see eu.etaxonomy.taxeditor.view.dataimport.DataImportView#getTextForTableItem(java.lang.Object)
  51      */
  52     @Override
  53     protected String getTextForTableItem(SpecimenOrObservationBase<?> item) {
  54         return item.getTitleCache();
  55     }
  56
  57     /* (non-Javadoc)
  58      * @see eu.etaxonomy.taxeditor.view.dataimport.DataImportView#query()
  59      */
  60     @Override
  61     public void query() {
  62         String errorMessage = "Could not execute query " + query;
  63
  64         Collection<SpecimenOrObservationBase<?>> results = new ArrayList<SpecimenOrObservationBase<?>>();
  65         try {
  66             //FIXME move ABCD import to cdmlib -> this will also get rid of the transient services
  67             InputStream resultStream;
  68             resultStream = new BioCaseQueryServiceWrapper().query(query, endPoint);
  69             Abcd206ImportConfigurator configurator = Abcd206ImportConfigurator.NewInstance(null, null);
  70 //            TransientCdmRepository repo =
  71 //                    new TransientCdmRepository(CdmStore.getCurrentApplicationConfiguration());
  72             //configurator.setCdmAppController(repo);
  73             configurator.setAddMediaAsMediaSpecimen(true);
  74             Job job = CdmStore.getImportManager().createIOServiceJob(configurator, resultStream, SOURCE_TYPE.INPUTSTREAM);
  75             CdmStore.getImportManager().run(job);
  76
  77             setResults(results);
  78         } catch (ClientProtocolException e) {
  79             logger.error(errorMessage, e);
  80         } catch (IOException e) {
  81             logger.error(errorMessage, e);
  82         }
  83
  84         setResults(results);
  85
  86     }
  87
  88 }