1 package eu
.etaxonomy
.taxeditor
.editor
.view
.derivate
;
3 import java
.util
.Collection
;
4 import java
.util
.HashSet
;
5 import java
.util
.Map
.Entry
;
8 import org
.eclipse
.core
.runtime
.IProgressMonitor
;
9 import org
.eclipse
.jface
.action
.MenuManager
;
10 import org
.eclipse
.jface
.util
.LocalSelectionTransfer
;
11 import org
.eclipse
.jface
.viewers
.AbstractTreeViewer
;
12 import org
.eclipse
.jface
.viewers
.ISelection
;
13 import org
.eclipse
.jface
.viewers
.ISelectionChangedListener
;
14 import org
.eclipse
.jface
.viewers
.SelectionChangedEvent
;
15 import org
.eclipse
.jface
.viewers
.StructuredSelection
;
16 import org
.eclipse
.jface
.viewers
.TreeNode
;
17 import org
.eclipse
.jface
.viewers
.TreeSelection
;
18 import org
.eclipse
.jface
.viewers
.TreeViewer
;
19 import org
.eclipse
.swt
.SWT
;
20 import org
.eclipse
.swt
.dnd
.DND
;
21 import org
.eclipse
.swt
.dnd
.Transfer
;
22 import org
.eclipse
.swt
.widgets
.Composite
;
23 import org
.eclipse
.swt
.widgets
.Control
;
24 import org
.eclipse
.swt
.widgets
.Menu
;
25 import org
.eclipse
.swt
.widgets
.Tree
;
26 import org
.eclipse
.ui
.IEditorInput
;
27 import org
.eclipse
.ui
.IEditorPart
;
28 import org
.eclipse
.ui
.IEditorSite
;
29 import org
.eclipse
.ui
.PartInitException
;
30 import org
.eclipse
.ui
.part
.EditorPart
;
32 import eu
.etaxonomy
.cdm
.api
.conversation
.ConversationHolder
;
33 import eu
.etaxonomy
.cdm
.api
.conversation
.IConversationEnabled
;
34 import eu
.etaxonomy
.cdm
.api
.service
.IOccurrenceService
;
35 import eu
.etaxonomy
.cdm
.api
.service
.molecular
.ISequenceService
;
36 import eu
.etaxonomy
.cdm
.model
.common
.CdmBase
;
37 import eu
.etaxonomy
.cdm
.model
.molecular
.Sequence
;
38 import eu
.etaxonomy
.cdm
.model
.molecular
.SingleRead
;
39 import eu
.etaxonomy
.cdm
.model
.occurrence
.SpecimenOrObservationBase
;
40 import eu
.etaxonomy
.cdm
.persistence
.hibernate
.CdmDataChangeMap
;
41 import eu
.etaxonomy
.taxeditor
.model
.IDirtyMarkable
;
42 import eu
.etaxonomy
.taxeditor
.model
.IPartContentHasDetails
;
43 import eu
.etaxonomy
.taxeditor
.model
.IPartContentHasFactualData
;
44 import eu
.etaxonomy
.taxeditor
.model
.IPartContentHasMedia
;
45 import eu
.etaxonomy
.taxeditor
.model
.IPartContentHasSupplementalData
;
46 import eu
.etaxonomy
.taxeditor
.operation
.IPostOperationEnabled
;
47 import eu
.etaxonomy
.taxeditor
.store
.CdmStore
;
48 import eu
.etaxonomy
.taxeditor
.view
.derivateSearch
.DerivateLabelProvider
;
51 * Displays the derivate hierarchy of the specimen specified in the editor input.
54 public class DerivateView
extends EditorPart
implements IPartContentHasFactualData
, IDirtyMarkable
,
55 IConversationEnabled
, IPartContentHasDetails
, IPartContentHasMedia
, IPartContentHasSupplementalData
,
56 ISelectionChangedListener
, IPostOperationEnabled
{
58 public static final String ID
= "eu.etaxonomy.taxeditor.editor.view.derivate.DerivateView";
60 private ConversationHolder conversation
;
62 private TreeViewer viewer
;
64 private boolean isDirty
;
66 private final int dndOperations
= DND
.DROP_MOVE
;
68 private DerivateLabelProvider labelProvider
;
70 private Set
<SingleRead
> multiLinkSingleReads
;
72 private ISelection selection
= null;
77 public DerivateView() {
81 * @see org.eclipse.ui.part.WorkbenchPart#createPartControl(org.eclipse.swt.widgets.Composite)
84 public void createPartControl(Composite parent
) {
85 viewer
= new TreeViewer(new Tree(parent
, SWT
.MULTI
| SWT
.H_SCROLL
| SWT
.V_SCROLL
| SWT
.FULL_SELECTION
));
86 viewer
.setContentProvider(new DerivateContentProvider());
87 labelProvider
= new DerivateLabelProvider();
88 labelProvider
.setConversation(conversation
);
89 viewer
.setLabelProvider(labelProvider
);
90 viewer
.setAutoExpandLevel(AbstractTreeViewer
.ALL_LEVELS
);
91 // Propagate selection from viewer
92 getSite().setSelectionProvider(viewer
);
93 //listen to selection changes
94 viewer
.addSelectionChangedListener(this);
97 MenuManager menuManager
= new MenuManager();
98 getSite().registerContextMenu(menuManager
, viewer
);
99 Control control
= viewer
.getControl();
100 Menu menu
= menuManager
.createContextMenu(control
);
101 control
.setMenu(menu
);
103 generateMultiLinkSingleReads();
104 labelProvider
.setMultiLinkSingleReads(multiLinkSingleReads
);
105 IEditorInput editorInput
= getEditorInput();
106 viewer
.setInput(editorInput
);
107 if(editorInput
instanceof DerivateViewEditorInput
){
108 SpecimenOrObservationBase
<?
> specimen
= CdmStore
.getService(IOccurrenceService
.class).load(((DerivateViewEditorInput
) editorInput
).getDerivateUUID());
109 SpecimenOrObservationBase
<?
> rootElement
= CdmStore
.getService(IOccurrenceService
.class).load(((DerivateViewEditorInput
) editorInput
).getRootElementUUID());
110 setPartName(labelProvider
.getDerivateText(rootElement
));
111 viewer
.setSelection(new StructuredSelection(new TreeNode(specimen
)));
114 //add drag'n'drop support
115 Transfer
[] transfers
= new Transfer
[] {LocalSelectionTransfer
.getTransfer(),};
116 viewer
.addDragSupport(dndOperations
, transfers
, new DerivateDragListener(this));
117 viewer
.addDropSupport(dndOperations
, transfers
, new DerivateDropListener(this));
121 * @see org.eclipse.ui.part.EditorPart#doSave(org.eclipse.core.runtime.IProgressMonitor)
124 public void doSave(IProgressMonitor monitor
) {
125 monitor
.beginTask("Saving Derivates", 3);
126 if (!conversation
.isBound()) {
131 // commit the conversation and start a new transaction immediately
132 conversation
.commit(true);
135 this.setDirty(false);
138 firePropertyChange(PROP_DIRTY
);
143 * @see org.eclipse.ui.part.EditorPart#doSaveAs()
146 public void doSaveAs() {
150 * @see org.eclipse.ui.part.EditorPart#getTitleToolTip()
153 public String
getTitleToolTip() {
154 return "Derivate View";
158 * @see org.eclipse.ui.part.EditorPart#init(org.eclipse.ui.IEditorSite, org.eclipse.ui.IEditorInput)
161 public void init(IEditorSite site
, IEditorInput input
) throws PartInitException
{
164 if(input
instanceof DerivateViewEditorInput
){
165 conversation
= ((DerivateViewEditorInput
) input
).getConversationHolder();
170 * @see org.eclipse.ui.part.EditorPart#isDirty()
173 public boolean isDirty() {
178 * @param isDirty the isDirty to set
180 public void setDirty(boolean isDirty
) {
181 this.isDirty
= isDirty
;
185 * @see org.eclipse.ui.part.EditorPart#isSaveAsAllowed()
188 public boolean isSaveAsAllowed() {
194 * @see org.eclipse.ui.part.WorkbenchPart#setFocus()
197 public void setFocus() {
198 viewer
.getControl().setFocus();
199 //make sure to bind again if maybe in another view the conversation was unbound
200 if(!conversation
.isBound()){
206 * @see eu.etaxonomy.cdm.persistence.hibernate.ICdmPostDataChangeObserver#update(eu.etaxonomy.cdm.persistence.hibernate.CdmDataChangeMap)
209 public void update(CdmDataChangeMap changeEvents
) {
213 * @see eu.etaxonomy.cdm.api.conversation.IConversationEnabled#getConversationHolder()
216 public ConversationHolder
getConversationHolder() {
223 public TreeViewer
getViewer() {
228 * @see eu.etaxonomy.taxeditor.model.IDirtyMarkableSelectionProvider#changed(java.lang.Object)
231 public void changed(Object element
) {
233 firePropertyChange(IEditorPart
.PROP_DIRTY
);
238 * @see eu.etaxonomy.taxeditor.model.IDirtyMarkableSelectionProvider#forceDirty()
241 public void forceDirty() {
246 * Refreshes the derivate hierarchy tree and expands the tree
247 * to show and select the given object.
249 * @param expandTo the object to which the tree should be expanded
251 public void refreshTree(Object expandTo
){
253 TreeSelection selection
= (TreeSelection
) viewer
.getSelection();
254 viewer
.expandToLevel(selection
.getFirstElement(), 1);
255 viewer
.setSelection(new StructuredSelection(new TreeNode(expandTo
)));
259 * Refreshes the derivate hierarchy tree
261 public void refreshTree(){
262 generateMultiLinkSingleReads();
263 labelProvider
.setMultiLinkSingleReads(multiLinkSingleReads
);
268 private void generateMultiLinkSingleReads() {
269 Set
<SingleRead
> multiLinkSingleReads
= new HashSet
<SingleRead
>();
270 for(Entry
<SingleRead
, Collection
<Sequence
>> entry
:CdmStore
.getService(ISequenceService
.class).getSingleReadSequencesMap().entrySet()){
271 if(entry
.getValue().size()>1){
272 multiLinkSingleReads
.add(entry
.getKey());
275 this.multiLinkSingleReads
= multiLinkSingleReads
;
279 * @return a set of {@link SingleRead}s that have multiple parents
281 public Set
<SingleRead
> getMultiLinkSingleReads() {
282 return this.multiLinkSingleReads
;
286 * @see org.eclipse.jface.viewers.ISelectionChangedListener#selectionChanged(org.eclipse.jface.viewers.SelectionChangedEvent)
289 public void selectionChanged(SelectionChangedEvent event
) {
290 this.selection
= event
.getSelection();
294 * @return the selection
296 public ISelection
getSelection() {
301 * @see eu.etaxonomy.taxeditor.operation.IPostOperationEnabled#postOperation(eu.etaxonomy.cdm.model.common.CdmBase)
304 public boolean postOperation(CdmBase objectAffectedByOperation
) {
306 if(objectAffectedByOperation
!=null){
307 DerivateViewEditorInput derivateViewEditorInput
= (DerivateViewEditorInput
) getEditorInput();
308 if(objectAffectedByOperation
.getUuid().equals(derivateViewEditorInput
.getRootElementUUID())){
309 // TODO close derivate view if root element is deleted
310 // this.getViewer().setEditorSite().getPage().close();
313 else if(objectAffectedByOperation
.getUuid().equals(derivateViewEditorInput
.getDerivateUUID())){
314 derivateViewEditorInput
.setRootAsDerivate();
316 changed(objectAffectedByOperation
);
323 * @see eu.etaxonomy.taxeditor.operation.IPostOperationEnabled#onComplete()
326 public boolean onComplete() {