eu.etaxonomy.taxeditor.store/src/main/java/eu/etaxonomy/taxeditor/view/detail/DetailsViewer.java

   1
   2 // $Id$
   3 /**
   4  * Copyright (C) 2011 EDIT
   5  * European Distributed Institute of Taxonomy
   6  * http://www.e-taxonomy.eu
   7  *
   8  * The contents of this file are subject to the Mozilla Public License Version 1.1
   9  * See LICENSE.TXT at the top of this package for the full license terms.
  10  */
  11
  12 package eu.etaxonomy.taxeditor.view.detail;
  13
  14 import java.util.Set;
  15
  16 import org.eclipse.jface.viewers.ISelection;
  17 import org.eclipse.jface.viewers.SelectionChangedEvent;
  18 import org.eclipse.jface.viewers.TreeNode;
  19 import org.eclipse.swt.SWT;
  20 import org.eclipse.swt.widgets.Composite;
  21 import org.eclipse.ui.forms.widgets.ExpandableComposite;
  22
  23 import eu.etaxonomy.cdm.api.facade.DerivedUnitFacade;
  24 import eu.etaxonomy.cdm.api.facade.DerivedUnitFacadeNotSupportedException;
  25 import eu.etaxonomy.cdm.ext.occurrence.gbif.GbifResponse;
  26 import eu.etaxonomy.cdm.model.agent.Person;
  27 import eu.etaxonomy.cdm.model.agent.Team;
  28 import eu.etaxonomy.cdm.model.agent.TeamOrPersonBase;
  29 import eu.etaxonomy.cdm.model.common.DefinedTermBase;
  30 import eu.etaxonomy.cdm.model.common.Group;
  31 import eu.etaxonomy.cdm.model.common.Marker;
  32 import eu.etaxonomy.cdm.model.common.TermVocabulary;
  33 import eu.etaxonomy.cdm.model.common.User;
  34 import eu.etaxonomy.cdm.model.description.CategoricalData;
  35 import eu.etaxonomy.cdm.model.description.DescriptionBase;
  36 import eu.etaxonomy.cdm.model.description.DescriptionElementBase;
  37 import eu.etaxonomy.cdm.model.description.PolytomousKeyNode;
  38 import eu.etaxonomy.cdm.model.description.SpecimenDescription;
  39 import eu.etaxonomy.cdm.model.media.Media;
  40 import eu.etaxonomy.cdm.model.molecular.DnaSample;
  41 import eu.etaxonomy.cdm.model.molecular.Sequence;
  42 import eu.etaxonomy.cdm.model.molecular.SingleRead;
  43 import eu.etaxonomy.cdm.model.name.NonViralName;
  44 import eu.etaxonomy.cdm.model.occurrence.DerivedUnit;
  45 import eu.etaxonomy.cdm.model.occurrence.FieldUnit;
  46 import eu.etaxonomy.cdm.model.occurrence.MediaSpecimen;
  47 import eu.etaxonomy.cdm.model.occurrence.SpecimenOrObservationType;
  48 import eu.etaxonomy.cdm.model.reference.Reference;
  49 import eu.etaxonomy.cdm.model.taxon.TaxonBase;
  50 import eu.etaxonomy.cdm.model.taxon.TaxonRelationship;
  51 import eu.etaxonomy.taxeditor.model.AbstractUtility;
  52 import eu.etaxonomy.taxeditor.model.FeatureNodeContainer;
  53 import eu.etaxonomy.taxeditor.model.IDerivedUnitFacadePart;
  54 import eu.etaxonomy.taxeditor.model.MessagingUtils;
  55 import eu.etaxonomy.taxeditor.model.PolytomousKeyRelationship;
  56 import eu.etaxonomy.taxeditor.preference.IPreferenceKeys;
  57 import eu.etaxonomy.taxeditor.preference.PreferencesUtil;
  58 import eu.etaxonomy.taxeditor.store.UsageTermCollection;
  59 import eu.etaxonomy.taxeditor.ui.element.AbstractFormSection;
  60 import eu.etaxonomy.taxeditor.ui.element.RootElement;
  61 import eu.etaxonomy.taxeditor.ui.section.agent.PersonDetailSection;
  62 import eu.etaxonomy.taxeditor.ui.section.agent.TeamDetailSection;
  63 import eu.etaxonomy.taxeditor.ui.section.agent.TeamOrPersonBaseDetailSection;
  64 import eu.etaxonomy.taxeditor.ui.section.common.ReferencedEntityDetailSection;
  65 import eu.etaxonomy.taxeditor.ui.section.description.DescriptionDetailSection;
  66 import eu.etaxonomy.taxeditor.ui.section.description.DescriptionElementDetailSection;
  67 import eu.etaxonomy.taxeditor.ui.section.description.DescriptionElementMediaSection;
  68 import eu.etaxonomy.taxeditor.ui.section.description.DescriptionElementSourceSection;
  69 import eu.etaxonomy.taxeditor.ui.section.description.DescriptionSourceSection;
  70 import eu.etaxonomy.taxeditor.ui.section.description.MediaDetailsSection;
  71 import eu.etaxonomy.taxeditor.ui.section.description.NaturalLanguageSection;
  72 import eu.etaxonomy.taxeditor.ui.section.description.ScopeSection;
  73 import eu.etaxonomy.taxeditor.ui.section.feature.FeatureDistributionDetailSection;
  74 import eu.etaxonomy.taxeditor.ui.section.grantedAuthority.GrantedAuthorityDetailSection;
  75 import eu.etaxonomy.taxeditor.ui.section.group.GroupDetailSection;
  76 import eu.etaxonomy.taxeditor.ui.section.group.MemberDetailSection;
  77 import eu.etaxonomy.taxeditor.ui.section.identifier.IdentifierDetailSection;
  78 import eu.etaxonomy.taxeditor.ui.section.key.PolytomousKeyDetailSection;
  79 import eu.etaxonomy.taxeditor.ui.section.key.PolytomousKeyNodeDetailSection;
  80 import eu.etaxonomy.taxeditor.ui.section.name.NameRelationshipDetailSection;
  81 import eu.etaxonomy.taxeditor.ui.section.name.NomenclaturalStatusSection;
  82 import eu.etaxonomy.taxeditor.ui.section.name.NonViralNameDetailSection;
  83 import eu.etaxonomy.taxeditor.ui.section.name.ProtologueSection;
  84 import eu.etaxonomy.taxeditor.ui.section.name.TypeDesignationSection;
  85 import eu.etaxonomy.taxeditor.ui.section.occurrence.DerivedUnitBaseDetailSection;
  86 import eu.etaxonomy.taxeditor.ui.section.occurrence.DerivedUnitGeneralDetailSection;
  87 import eu.etaxonomy.taxeditor.ui.section.occurrence.DeterminationDetailSection;
  88 import eu.etaxonomy.taxeditor.ui.section.occurrence.EmptySection;
  89 import eu.etaxonomy.taxeditor.ui.section.occurrence.FieldUnitDetailSection;
  90 import eu.etaxonomy.taxeditor.ui.section.occurrence.FieldUnitGeneralDetailSection;
  91 import eu.etaxonomy.taxeditor.ui.section.occurrence.GatheringEventDetailSection;
  92 import eu.etaxonomy.taxeditor.ui.section.occurrence.association.DerivedUnitTypeDesignationSection;
  93 import eu.etaxonomy.taxeditor.ui.section.occurrence.association.TaxonAssociationDetailSection;
  94 import eu.etaxonomy.taxeditor.ui.section.occurrence.dna.DnaQualityDetailSection;
  95 import eu.etaxonomy.taxeditor.ui.section.occurrence.dna.DnaSampleGeneralDetailSection;
  96 import eu.etaxonomy.taxeditor.ui.section.occurrence.dna.DnaSamplePreparationPreservationSection;
  97 import eu.etaxonomy.taxeditor.ui.section.occurrence.dna.SampleDesignationDetailSection;
  98 import eu.etaxonomy.taxeditor.ui.section.occurrence.dna.SequenceContigFileCollectionDetailSection;
  99 import eu.etaxonomy.taxeditor.ui.section.occurrence.dna.SequenceGeneralDetailSection;
 100 import eu.etaxonomy.taxeditor.ui.section.occurrence.dna.SequenceReferenceCollectionDetailSection;
 101 import eu.etaxonomy.taxeditor.ui.section.occurrence.dna.SingleReadGeneralDetailSection;
 102 import eu.etaxonomy.taxeditor.ui.section.occurrence.dna.SingleReadPherogramCollectionDetailSection;
 103 import eu.etaxonomy.taxeditor.ui.section.occurrence.dna.TissueSampleGeneralDetailSection;
 104 import eu.etaxonomy.taxeditor.ui.section.occurrence.media.MediaSpecimenGeneralDetailSection;
 105 import eu.etaxonomy.taxeditor.ui.section.reference.NomenclaturalReferenceDetailSection;
 106 import eu.etaxonomy.taxeditor.ui.section.reference.ReferenceDetailSection;
 107 import eu.etaxonomy.taxeditor.ui.section.supplemental.RightsSection;
 108 import eu.etaxonomy.taxeditor.ui.section.taxon.ParsingMessagesSection;
 109 import eu.etaxonomy.taxeditor.ui.section.taxon.TaxonBaseDetailSection;
 110 import eu.etaxonomy.taxeditor.ui.section.taxon.TaxonRelationshipDetailSection;
 111 import eu.etaxonomy.taxeditor.ui.section.user.GroupsByUserDetailSection;
 112 import eu.etaxonomy.taxeditor.ui.section.user.UserDetailSection;
 113 import eu.etaxonomy.taxeditor.ui.section.userecords.UseRecordDetailSection;
 114 import eu.etaxonomy.taxeditor.ui.section.vocabulary.TermVocabularyDetailSection;
 115 import eu.etaxonomy.taxeditor.view.AbstractCdmDataViewer;
 116 import eu.etaxonomy.taxeditor.view.AbstractCdmViewPart;
 117
 118 /**
 119  *
 120  * The DetailsViewer handles the content of the details view (
 121  * {@link DetailsViewPart}).<br>
 122  * Depending on the type of the selected element the section of the details view
 123  * are created.
 124  *
 125  * @author n.hoffmann
 126  * @created Feb 12, 2010
 127  * @version 1.0
 128  */
 129 public class DetailsViewer extends AbstractCdmDataViewer {
 130
 131     private ISelection selection;
 132
 133     public DetailsViewer(Composite parent, AbstractCdmViewPart viewPart) {
 134         super(parent, viewPart);
 135     }
 136
 137     // START HACK TO MAKE THE DERIVED UNIT FACADE WORK
 138     // since we are getting implementations of DerivedUnitBase from the bulk
 139     // editor
 140     // and not derived unit facade objects,
 141
 142     @Override
 143     public void setInput(Object input) {
 144         if(input instanceof TreeNode){
 145             input = ((TreeNode) input).getValue();
 146         }
 147         if(input instanceof GbifResponse){
 148             input = ((GbifResponse) input).getDerivedUnitFacade();
 149         }
 150         if (input.getClass().equals(DerivedUnit.class)) {
 151             DerivedUnit derivedUnit = (DerivedUnit)input;
 152             try {
 153                 input = DerivedUnitFacade.NewInstance(derivedUnit,
 154                         PreferencesUtil.getDerivedUnitConfigurator());
 155             } catch (DerivedUnitFacadeNotSupportedException e) {
 156 //                MessagingUtils.error(getClass(), e); //nothing should happen, later on the Details View will show an according information that it is not possible to open this data
 157             }
 158         }
 159         else if(input instanceof FieldUnit){
 160             input = DerivedUnitFacade.NewInstance(SpecimenOrObservationType.FieldUnit, (FieldUnit) input);
 161         }
 162         super.setInput(input);
 163     }
 164
 165     @Override
 166     protected void markViewPartDirty() {
 167         if (getInput() instanceof DerivedUnitFacade) {
 168             DerivedUnitFacade facade = (DerivedUnitFacade) getInput();
 169             if(facade.innerDerivedUnit()!=null){
 170                 getViewPart().changed(facade.innerDerivedUnit());
 171             }
 172             else if(facade.innerFieldUnit()!=null){
 173                 getViewPart().changed(facade.innerFieldUnit());
 174             }
 175         }
 176         else{
 177             super.markViewPartDirty();
 178         }
 179     }
 180
 181     // END HACK TO MAKE THE DERIVED UNIT FACADE WORK
 182
 183
 184     /** {@inheritDoc} */
 185     @Override
 186     protected void showParts() {
 187         // FIXME (CM) : Need to clean out this code.
 188         // Too much type checking to decide which detail view to display.
 189         // Need to build in a mechanism where navigators / editors are 'aware'
 190         // of the corresponding detail viewer.
 191         Object input = getInput();
 192
 193         destroySections();
 194         if (input instanceof TaxonBase) {
 195             if(((TaxonBase) input).getName()==null){
 196                 createEmptySection(rootElement);
 197             }
 198             else{
 199                 createTaxonSections(rootElement);
 200             }
 201
 202         } else if (input instanceof NonViralName) {
 203             createNameSections(rootElement);
 204
 205         } else if (input instanceof Reference) {
 206             createReferenceSections(rootElement);
 207
 208         } else if (input instanceof Team) {
 209             createTeamDetailSection(rootElement);
 210
 211         } else if (input instanceof Person) {
 212             createPersonDetailSection(rootElement);
 213
 214         } else if (input instanceof TeamOrPersonBase) {
 215             createTeamOrPersonBaseDetailSection(rootElement);
 216
 217         } else if (input instanceof DescriptionBase) {
 218             if(input instanceof SpecimenDescription){
 219                 //TODO: add more sections to DetailsView for SpecimenDescription
 220                 createSpecimenDescriptionSection(rootElement);
 221             }
 222             else{
 223                 Set<Marker> descriptionMarkers = ((DescriptionBase<?>) input).getMarkers();
 224
 225                 Boolean isUseDescription = false;
 226                 for (Marker marker : descriptionMarkers) {
 227                     if (marker.getMarkerType()!= null && marker.getMarkerType().getUuid().equals(UsageTermCollection.uuidUseMarkerType)) {
 228                         isUseDescription = true;
 229                     }
 230                 }
 231                 if (((DescriptionBase<?>) input).isImageGallery()) {
 232                     createImageGallerySection(rootElement);
 233
 234                 } else if (isUseDescription) {
 235                     createUseDescriptionSection(rootElement);
 236                 } else {
 237                     createDescriptionSection(rootElement);
 238
 239                 }
 240             }
 241         } else if (input instanceof DescriptionElementBase) {
 242             Set<Marker> descriptionMarkers = ((DescriptionElementBase) input).getInDescription().getMarkers();
 243
 244             Boolean isUseDescription = false;
 245             for (Marker marker : descriptionMarkers) {
 246                 if (marker.getMarkerType()!= null && marker.getMarkerType().getUuid().equals(UsageTermCollection.uuidUseMarkerType)) {
 247                     isUseDescription = true;
 248                 }
 249             }
 250
 251             if (isUseDescription == true && input instanceof CategoricalData) {
 252                 createUseRecordSection(rootElement);
 253             } else {
 254                 createDescriptionElementSection(rootElement);
 255             }
 256
 257         } else if (input instanceof Media) {
 258             createMediaElementSection(rootElement);
 259
 260         } else if (input instanceof DerivedUnitFacade) {
 261             if(((DerivedUnitFacade) input).getType()==SpecimenOrObservationType.FieldUnit){
 262                 if(((DerivedUnitFacade) input).innerFieldUnit()==null){
 263                     MessagingUtils.error(DetailsViewer.class, "FieldUnit of facade is null", null);
 264                 }
 265                 else{
 266                     createFieldUnitSection(rootElement);
 267                 }
 268             }
 269             else if(((DerivedUnitFacade) input).getType()==SpecimenOrObservationType.PreservedSpecimen){
 270                 if(((DerivedUnitFacade) input).innerDerivedUnit()==null){
 271                     MessagingUtils.error(DetailsViewer.class, "DerivedUnit of facade is null", null);
 272                 }
 273                 else{
 274                     createDerivedUnitBaseElementSection(rootElement);
 275                 }
 276             }
 277             else if(((DerivedUnitFacade) input).getType()==SpecimenOrObservationType.TissueSample){
 278                 //TissueSample should only be created by using it's own class
 279                 //in future using only one class with different SpecimenOrObservationTypes is desired
 280 //                createTissueSampleSection(rootElement);
 281             }
 282             else{
 283                 createDerivedUnitBaseElementSection(rootElement);
 284             }
 285         } else if (input instanceof DnaSample){
 286             DnaSample dnaSample = (DnaSample)input;
 287             if(dnaSample.getRecordBasis()==SpecimenOrObservationType.TissueSample){
 288                 createTissueSampleSection(rootElement);
 289             }
 290             else if(dnaSample.getRecordBasis()==SpecimenOrObservationType.DnaSample){
 291                 createDnaSampleSection(rootElement);
 292             }
 293         } else if (input instanceof MediaSpecimen){
 294             createMediaSpecimenSection(rootElement);
 295         }
 296         else if(input instanceof Sequence){
 297             createSequenceSection(rootElement);
 298         }
 299         else if(input instanceof SingleRead){
 300             createSingleReadSection(rootElement);
 301         }
 302         else if (input instanceof FeatureNodeContainer) {
 303             createFeatureDistributionSection(rootElement);
 304
 305         }else if ((input instanceof PolytomousKeyNode) || (input instanceof PolytomousKeyRelationship)) {
 306             createPolytomousKeyNodeSection(rootElement);
 307         } else if (input instanceof User) {
 308             createUserSection(rootElement);
 309         } else if (input instanceof Group) {
 310             createGroupSection(rootElement);
 311         } else if (input instanceof TaxonRelationship) {
 312             createTaxonRelationshipSection(rootElement);
 313         } else if (input instanceof TermVocabulary) {
 314             createTermVocabularySection(rootElement);
 315         } else if (input instanceof DefinedTermBase) {
 316             createDefinedTermSection(rootElement);
 317         }
 318         else {
 319             createEmptySection(rootElement);
 320         }
 321         layout();
 322     }
 323
 324
 325     private void createEmptySection(RootElement parent) {
 326         destroySections();
 327
 328         EmptySection emptySection = formFactory.createEmptySection(formFactory, parent, SWT.NONE);
 329
 330         addPart(emptySection);
 331     }
 332
 333     private void createGroupSection(RootElement parent) {
 334         destroySections();
 335
 336         GroupDetailSection groupDetailSection = formFactory.createGroupDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE| ExpandableComposite.EXPANDED);
 337         MemberDetailSection memberDetailSection = formFactory.createMemberDetailSection(getConversationHolder(), parent, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
 338         GrantedAuthorityDetailSection grantedAuthorityDetailSection = formFactory.createGrantedAuthorityDetailSection(getConversationHolder(), parent,ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
 339
 340         addPart(groupDetailSection);
 341         addPart(memberDetailSection);
 342         addPart(grantedAuthorityDetailSection);
 343     }
 344
 345     /** {@inheritDoc} */
 346     @Override
 347     public ISelection getSelection() {
 348         return selection;
 349     }
 350
 351     /** {@inheritDoc} */
 352     @Override
 353     public void setSelection(ISelection selection, boolean reveal) {
 354         this.selection = selection;
 355         if(this.selection!=null){
 356             SelectionChangedEvent selectionChangedEvent = new SelectionChangedEvent(this, selection);
 357             fireSelectionChanged(selectionChangedEvent);
 358         }
 359     }
 360
 361     private void createTaxonSections(RootElement parent) {
 362         destroySections();
 363
 364         ParsingMessagesSection parsingMessagesSection = formFactory.createParsingMessagesSection(getConversationHolder(), parent, this,
 365                 ExpandableComposite.EXPANDED | ExpandableComposite.EXPANDED);
 366
 367         TaxonBaseDetailSection taxonBaseDetailSection = formFactory.createTaxonBaseDetailSection(getConversationHolder(), parent, this,
 368                         ExpandableComposite.TWISTIE     | ExpandableComposite.EXPANDED);
 369         formFactory.createHorizontalSeparator(parent, SWT.BORDER);
 370
 371         NonViralNameDetailSection nonViralNameSection = formFactory
 372                 .createNonViralNameDetailSection(getConversationHolder(), parent, this, true,
 373                         ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
 374         formFactory.createHorizontalSeparator(parent, SWT.BORDER);
 375
 376         NomenclaturalReferenceDetailSection referenceDetailSection = formFactory.createNomenclaturalReferenceDetailSection(getConversationHolder(), parent, this,
 377                         ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
 378         formFactory.createHorizontalSeparator(parent, SWT.BORDER);
 379
 380         NomenclaturalStatusSection nomenclaturalStatusSection = formFactory.createNomenclaturalStatusSection(getConversationHolder(), parent,
 381                         ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
 382         formFactory.createHorizontalSeparator(parent, SWT.BORDER);
 383
 384         //TODO RL
 385         if(!PreferencesUtil.getPreferenceStore().getBoolean(IPreferenceKeys.IS_RL)){
 386                 ProtologueSection protologSection = formFactory.createProtologueSection(getConversationHolder(), parent, ExpandableComposite.TWISTIE);
 387                 formFactory.createHorizontalSeparator(parent, SWT.BORDER);
 388
 389                 TypeDesignationSection typeDesignationSection = formFactory.createTypeDesignationSection(getConversationHolder(), parent, ExpandableComposite.TWISTIE);
 390                 formFactory.createHorizontalSeparator(parent, SWT.BORDER);
 391
 392                 NameRelationshipDetailSection nameRelationshipSection = formFactory.createNameRelationshipDetailSection(getConversationHolder(), parent, ExpandableComposite.TWISTIE);
 393                 formFactory.createHorizontalSeparator(parent, SWT.BORDER);
 394
 395                         addPart(protologSection);
 396                         addPart(typeDesignationSection);
 397                         addPart(nameRelationshipSection);
 398         }
 399
 400         addPart(parsingMessagesSection);
 401         addPart(taxonBaseDetailSection);
 402         addPart(nonViralNameSection);
 403         addPart(nomenclaturalStatusSection);
 404         addPart(referenceDetailSection);
 405     }
 406
 407     private void createNameSections(RootElement parent) {
 408         destroySections();
 409         NonViralNameDetailSection nonViralNameSection = formFactory.createNonViralNameDetailSection(
 410                 getConversationHolder(), parent, this, false, ExpandableComposite.TWISTIE
 411                         | ExpandableComposite.EXPANDED);
 412         formFactory.createHorizontalSeparator(parent, SWT.BORDER);
 413
 414         NomenclaturalReferenceDetailSection referenceDetailSection = formFactory.createNomenclaturalReferenceDetailSection(getConversationHolder(), parent, this,
 415                         ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
 416         formFactory.createHorizontalSeparator(parent, SWT.BORDER);
 417
 418         NomenclaturalStatusSection nomenclaturalStatusSection = formFactory.createNomenclaturalStatusSection(getConversationHolder(), parent,
 419                         ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
 420         formFactory.createHorizontalSeparator(parent, SWT.BORDER);
 421
 422         addPart(nonViralNameSection);
 423         addPart(nomenclaturalStatusSection);
 424         addPart(referenceDetailSection);
 425 //TODO RL
 426         if(!PreferencesUtil.getPreferenceStore().getBoolean(IPreferenceKeys.IS_RL)){
 427                         ProtologueSection protologSection = formFactory.createProtologueSection(getConversationHolder(), parent, ExpandableComposite.TWISTIE);
 428                 formFactory.createHorizontalSeparator(parent, SWT.BORDER);
 429
 430                 TypeDesignationSection typeDesignationSection = formFactory.createTypeDesignationSection(getConversationHolder(), parent, ExpandableComposite.TWISTIE);
 431                 formFactory.createHorizontalSeparator(parent, SWT.BORDER);
 432
 433                 NameRelationshipDetailSection nameRelationshipSection = formFactory.createNameRelationshipDetailSection(getConversationHolder(), parent, ExpandableComposite.TWISTIE);
 434                 formFactory.createHorizontalSeparator(parent, SWT.BORDER);
 435                 addPart(protologSection);
 436                 addPart(typeDesignationSection);
 437                 addPart(nameRelationshipSection);
 438         }
 439     }
 440
 441     private void createReferenceSections(RootElement parent) {
 442         destroySections();
 443
 444         ReferenceDetailSection referenceDetailSection = formFactory.createReferenceDetailSection(getConversationHolder(), parent, this,
 445                         ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
 446
 447         addPart(referenceDetailSection);
 448     }
 449
 450     private void createTeamOrPersonBaseDetailSection(RootElement parent) {
 451         destroySections();
 452         TeamOrPersonBaseDetailSection teamOrPersonBaseDetailSection = formFactory.createTeamOrPersonBaseDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
 453
 454         addPart(teamOrPersonBaseDetailSection);
 455     }
 456
 457     private void createTeamDetailSection(RootElement parent) {
 458         destroySections();
 459         TeamDetailSection teamDetailSection = formFactory.createTeamDetailSection(getConversationHolder(), parent, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
 460
 461         addPart(teamDetailSection);
 462     }
 463
 464     private void createPersonDetailSection(RootElement parent) {
 465         destroySections();
 466         PersonDetailSection personDetailSection = formFactory.createPersonDetailSection(getConversationHolder(), parent, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
 467         addPart(personDetailSection);
 468     }
 469
 470     private void createDescriptionElementSection(RootElement parent) {
 471         destroySections();
 472
 473         DescriptionElementDetailSection descriptionElementDetailSection = formFactory.createDescriptionElementDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
 474
 475         formFactory.createHorizontalSeparator(parent, SWT.BORDER);
 476
 477         DescriptionElementSourceSection descriptionElementSourceSection = formFactory.createDescriptionElementSourceSection(getConversationHolder(), parent, ExpandableComposite.TWISTIE);
 478
 479         formFactory.createHorizontalSeparator(parent, SWT.BORDER);
 480
 481         DescriptionElementMediaSection descriptionElementMediaSection = formFactory.createDescriptionElementMediaSection(getConversationHolder(), parent, ExpandableComposite.TWISTIE);
 482
 483         formFactory.createHorizontalSeparator(parent, SWT.BORDER);
 484
 485         addPart(descriptionElementDetailSection);
 486         addPart(descriptionElementSourceSection);
 487         addPart(descriptionElementMediaSection);
 488     }
 489
 490     private void createDescriptionSection(RootElement parent) {
 491         destroySections();
 492         DescriptionDetailSection descriptionDetailSection = formFactory.createDescriptionDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
 493
 494         formFactory.createHorizontalSeparator(parent, SWT.BORDER);
 495
 496         NaturalLanguageSection naturalLanguageSection = formFactory.createNaturalLanguageSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
 497
 498         formFactory.createHorizontalSeparator(parent, SWT.BORDER);
 499
 500 //        DescribedSpecimenSection describedSpecimenSection = formFactory.createDescribedSpecimenSection(getConversationHolder(), parent, ExpandableComposite.TWISTIE);
 501 //
 502 //        formFactory.createHorizontalSeparator(parent, SWT.BORDER);
 503
 504         //              DescriptionSourceSection descriptionSourceSection = (DescriptionSourceSection) formFactory
 505         //                              .createEntityDetailSection(EntityDetailType.DESCRIPTIONSOURCE,
 506         //                                              getConversationHolder(), parent, Section.TWISTIE);
 507         //
 508         //              formFactory.createHorizontalSeparator(parent, SWT.BORDER);
 509
 510         ScopeSection scopeSection = formFactory.createScopeSection(getConversationHolder(), parent, ExpandableComposite.TWISTIE);
 511
 512         formFactory.createHorizontalSeparator(parent, SWT.BORDER);
 513
 514         addPart(descriptionDetailSection);
 515         addPart(naturalLanguageSection);
 516 //        addPart(describedSpecimenSection);
 517         //              addPart(descriptionSourceSection);
 518         addPart(scopeSection);
 519     }
 520
 521     private void createSpecimenDescriptionSection(RootElement parent) {
 522         destroySections();
 523         DescriptionDetailSection descriptionDetailSection = formFactory.createDescriptionDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
 524         addPart(descriptionDetailSection);
 525     }
 526
 527     private void createUseDescriptionSection(RootElement parent) {
 528         destroySections();
 529         DescriptionDetailSection descriptionDetailSection = formFactory.createDescriptionDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
 530
 531         formFactory.createHorizontalSeparator(parent, SWT.BORDER);
 532
 533         DescriptionSourceSection descriptionSourceSection = formFactory.createDescriptionSourceSection(getConversationHolder(), parent, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
 534
 535         formFactory.createHorizontalSeparator(parent, SWT.BORDER);
 536
 537         addPart(descriptionDetailSection);
 538         addPart(descriptionSourceSection);
 539
 540     }
 541
 542     private void createImageGallerySection(RootElement parent) {
 543         destroySections();
 544         DescriptionDetailSection descriptionDetailSection = formFactory.createDescriptionDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
 545
 546         addPart(descriptionDetailSection);
 547     }
 548
 549     private void createMediaElementSection(RootElement parent) {
 550         destroySections();
 551
 552         MediaDetailsSection mediaDetailSection = formFactory.createMediaDetailsSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
 553
 554         addPart(mediaDetailSection);
 555     }
 556
 557     private void createDerivedUnitBaseElementSection(RootElement parent) {
 558         destroySections();
 559
 560         DerivedUnitGeneralDetailSection derivedUnitGeneralDetailSection = formFactory.createDerivedUnitGeneralDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
 561         //TODO for DerivateEditor do not use facade anymore to avoid this special case handling #4539
 562         if(!(AbstractUtility.getActivePart() instanceof IDerivedUnitFacadePart)){
 563             derivedUnitGeneralDetailSection.setShowOnlyDerivedUnitData(true);
 564         }
 565         addPart(derivedUnitGeneralDetailSection);
 566
 567         formFactory.createHorizontalSeparator(parent, SWT.BORDER);
 568
 569         DerivedUnitBaseDetailSection derivedUnitBaseDetailSection = formFactory.createDerivedUnitBaseDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
 570         addPart(derivedUnitBaseDetailSection);
 571
 572         //for editors working with facades
 573         if(AbstractUtility.getActivePart() instanceof IDerivedUnitFacadePart){
 574             formFactory.createHorizontalSeparator(parent, SWT.BORDER);
 575             GatheringEventDetailSection gatheringEventDetailSection = formFactory.createGatheringEventDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE);
 576             addPart(gatheringEventDetailSection);
 577
 578             formFactory.createHorizontalSeparator(parent, SWT.BORDER);
 579             FieldUnitDetailSection fieldUnitDetailSection = formFactory.createFieldUnitDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE);
 580             addPart(fieldUnitDetailSection);
 581         }
 582         else{
 583
 584             if(PreferencesUtil.getPreferenceStore().getBoolean(IPreferenceKeys.SHOW_TAXON_ASSOCIATIONS)){
 585                 formFactory.createHorizontalSeparator(parent, SWT.BORDER);
 586                 TaxonAssociationDetailSection taxonAssociationDetailSection = formFactory.createTaxonAssociationDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
 587                 addPart(taxonAssociationDetailSection);
 588             }
 589             formFactory.createHorizontalSeparator(parent, SWT.BORDER);
 590             IdentifierDetailSection identifierDetailSection = formFactory.createIdentifierDetailSection(getConversationHolder(), parent, ExpandableComposite.TWISTIE);
 591             addPart(identifierDetailSection);
 592         }
 593         if(!PreferencesUtil.getPreferenceStore().getBoolean(IPreferenceKeys.DETERMINATION_ONLY_FOR_FIELD_UNITS)){
 594             formFactory.createHorizontalSeparator(parent, SWT.BORDER);
 595             DeterminationDetailSection determinationDetailSection = formFactory.createDeterminationDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE);
 596             addPart(determinationDetailSection);
 597         }
 598
 599         formFactory.createHorizontalSeparator(parent, SWT.BORDER);
 600         DerivedUnitTypeDesignationSection derivedUnitTypeDesignationSection = formFactory.createDerivedUnitTypeDesignationSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE);
 601         addPart(derivedUnitTypeDesignationSection);
 602
 603     }
 604
 605     private void createFieldUnitSection(RootElement parent) {
 606         destroySections();
 607
 608         FieldUnitGeneralDetailSection fielUnitGeneralDetailSection = formFactory.createFieldUnitGeneralDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
 609
 610         formFactory.createHorizontalSeparator(parent, SWT.BORDER);
 611
 612         GatheringEventDetailSection gatheringEventDetailSection = formFactory.createGatheringEventDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE);
 613
 614         formFactory.createHorizontalSeparator(parent, SWT.BORDER);
 615
 616         FieldUnitDetailSection fieldUnitDetailSection = formFactory.createFieldUnitDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE);
 617
 618         addPart(fielUnitGeneralDetailSection);
 619         addPart(gatheringEventDetailSection);
 620         addPart(fieldUnitDetailSection);
 621
 622         if(PreferencesUtil.getPreferenceStore().getBoolean(IPreferenceKeys.DETERMINATION_ONLY_FOR_FIELD_UNITS)){
 623             formFactory.createHorizontalSeparator(parent, SWT.BORDER);
 624             DeterminationDetailSection determinationDetailSection = formFactory.createDeterminationDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE);
 625             addPart(determinationDetailSection);
 626         }
 627     }
 628
 629     private void createTissueSampleSection(RootElement parent) {
 630         destroySections();
 631
 632         TissueSampleGeneralDetailSection section = formFactory.createTissueSampleGeneralDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
 633
 634         formFactory.createHorizontalSeparator(parent, SWT.BORDER);
 635
 636         SampleDesignationDetailSection sampleDesignationDetailSection = formFactory.createSampleDesignationDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
 637
 638         addPart(section);
 639         addPart(sampleDesignationDetailSection);
 640     }
 641
 642     private void createDnaSampleSection(RootElement parent) {
 643         destroySections();
 644
 645         DnaSampleGeneralDetailSection section = formFactory.createDnaSampleGeneralDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
 646
 647         formFactory.createHorizontalSeparator(parent, SWT.BORDER);
 648
 649         DnaSamplePreparationPreservationSection preparationPreservationSection = formFactory.createDnaSamplePreparationPreservationSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
 650
 651         formFactory.createHorizontalSeparator(parent, SWT.BORDER);
 652
 653         DnaQualityDetailSection qualitySection = formFactory.createDnaQualityDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
 654
 655         formFactory.createHorizontalSeparator(parent, SWT.BORDER);
 656
 657         SampleDesignationDetailSection sampleDesignationDetailSection = formFactory.createSampleDesignationDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
 658
 659         addPart(section);
 660         addPart(preparationPreservationSection);
 661         addPart(qualitySection);
 662         addPart(sampleDesignationDetailSection);
 663     }
 664
 665     private void createSequenceSection(RootElement parent) {
 666         destroySections();
 667
 668         SequenceGeneralDetailSection section = formFactory.createSequenceGeneralDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
 669
 670         formFactory.createHorizontalSeparator(parent, SWT.BORDER);
 671
 672         SequenceReferenceCollectionDetailSection referenceSection = formFactory.createSequenceReferenceCollectionDetailSection(getConversationHolder(), parent, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
 673
 674         formFactory.createHorizontalSeparator(parent, SWT.BORDER);
 675
 676         SequenceContigFileCollectionDetailSection contigFileSection = formFactory.createSequenceContigFileCollectionDetailSection(getConversationHolder(), parent, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
 677
 678
 679         addPart(section);
 680         addPart(referenceSection);
 681         addPart(contigFileSection);
 682     }
 683
 684     private void createSingleReadSection(RootElement parent) {
 685         destroySections();
 686
 687         SingleReadGeneralDetailSection section = formFactory.createSingleReadGeneralDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
 688         addPart(section);
 689
 690         formFactory.createHorizontalSeparator(parent, SWT.BORDER);
 691
 692         SingleReadPherogramCollectionDetailSection pherogramSection = formFactory.createSingleReadPherogramCollectionDetailSection(getConversationHolder(), parent, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
 693         addPart(pherogramSection);
 694
 695     }
 696
 697     private void createMediaSpecimenSection(RootElement parent) {
 698         destroySections();
 699
 700         MediaSpecimenGeneralDetailSection generalSection = formFactory.createMediaSpecimenGeneralDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
 701         addPart(generalSection);
 702
 703         formFactory.createHorizontalSeparator(parent, SWT.BORDER);
 704
 705         RightsSection rightsSection = formFactory.createRightsSection(getConversationHolder(), parent, ExpandableComposite.TWISTIE);
 706         addPart(rightsSection);
 707
 708     }
 709
 710     private void createFeatureDistributionSection(RootElement parent) {
 711         destroySections();
 712
 713         FeatureDistributionDetailSection featureDistributionSection = formFactory.createFeatureDistributionDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
 714
 715         addPart(featureDistributionSection);
 716     }
 717
 718     private void createPolytomousKeyNodeSection(RootElement parent) {
 719         destroySections();
 720
 721         PolytomousKeyDetailSection polytomousKeyDetailSection = formFactory.createPolytomousKeyDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE);
 722
 723         formFactory.createHorizontalSeparator(parent, SWT.BORDER);
 724
 725         PolytomousKeyNodeDetailSection polytomousKeyNodeDetailSection = formFactory.createPolytomousKeyNodeDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
 726
 727         addPart(polytomousKeyDetailSection);
 728         addPart(polytomousKeyNodeDetailSection);
 729
 730     }
 731
 732     private void createUseRecordSection(RootElement parent) {
 733         destroySections();
 734
 735         UseRecordDetailSection descriptionUseRecordSection = formFactory.createUseRecordDetailSection(getConversationHolder(), parent, this,ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
 736
 737         formFactory.createHorizontalSeparator(parent, SWT.BORDER);
 738
 739         addPart(descriptionUseRecordSection);
 740
 741
 742     }
 743
 744     private void createUserSection(RootElement parent) {
 745         destroySections();
 746
 747         UserDetailSection userDetailSection = formFactory.createUserDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
 748
 749         GroupsByUserDetailSection groupByUserDetailSection = formFactory.createGroupsByUserDetailSection(getConversationHolder(), parent, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
 750
 751         addPart(userDetailSection);
 752         addPart(groupByUserDetailSection);
 753     }
 754
 755     private void createTaxonRelationshipSection(RootElement parent) {
 756         destroySections();
 757
 758         TaxonRelationshipDetailSection taxonRelationshipDetailSection = formFactory.createTaxonRelationshipDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
 759
 760         ReferencedEntityDetailSection referencedEntityBaseDetailSection = formFactory.createReferencedEntityDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
 761         addPart(taxonRelationshipDetailSection);
 762         addPart(referencedEntityBaseDetailSection);
 763     }
 764
 765     private void createTermVocabularySection(RootElement parent) {
 766         destroySections();
 767
 768         TermVocabularyDetailSection termVocabularyDetailSection = formFactory.createTermVocabularyDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
 769         addPart(termVocabularyDetailSection);
 770     }
 771
 772     private void createDefinedTermSection(RootElement parent) {
 773         destroySections();
 774
 775         AbstractFormSection<?> definedTermDetailSection = formFactory.createDefinedTermDetailSection(getInput().getClass(), getConversationHolder(), parent, this, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
 776         addPart(definedTermDetailSection);
 777     }
 778
 779 }