eu.etaxonomy.taxeditor.store/src/main/java/eu/etaxonomy/taxeditor/view/detail/DetailsViewer.java

   1
   2 // $Id$
   3 /**
   4  * Copyright (C) 2011 EDIT
   5  * European Distributed Institute of Taxonomy
   6  * http://www.e-taxonomy.eu
   7  *
   8  * The contents of this file are subject to the Mozilla Public License Version 1.1
   9  * See LICENSE.TXT at the top of this package for the full license terms.
  10  */
  11
  12 package eu.etaxonomy.taxeditor.view.detail;
  13
  14 import java.util.Set;
  15
  16 import org.eclipse.jface.viewers.ISelection;
  17 import org.eclipse.jface.viewers.SelectionChangedEvent;
  18 import org.eclipse.jface.viewers.TreeNode;
  19 import org.eclipse.swt.SWT;
  20 import org.eclipse.swt.widgets.Composite;
  21 import org.eclipse.ui.forms.widgets.ExpandableComposite;
  22
  23 import eu.etaxonomy.cdm.api.facade.DerivedUnitFacade;
  24 import eu.etaxonomy.cdm.api.facade.DerivedUnitFacadeNotSupportedException;
  25 import eu.etaxonomy.cdm.ext.occurrence.gbif.GbifResponse;
  26 import eu.etaxonomy.cdm.model.agent.Person;
  27 import eu.etaxonomy.cdm.model.agent.Team;
  28 import eu.etaxonomy.cdm.model.agent.TeamOrPersonBase;
  29 import eu.etaxonomy.cdm.model.common.DefinedTermBase;
  30 import eu.etaxonomy.cdm.model.common.Group;
  31 import eu.etaxonomy.cdm.model.common.Marker;
  32 import eu.etaxonomy.cdm.model.common.TermVocabulary;
  33 import eu.etaxonomy.cdm.model.common.User;
  34 import eu.etaxonomy.cdm.model.description.CategoricalData;
  35 import eu.etaxonomy.cdm.model.description.DescriptionBase;
  36 import eu.etaxonomy.cdm.model.description.DescriptionElementBase;
  37 import eu.etaxonomy.cdm.model.description.PolytomousKeyNode;
  38 import eu.etaxonomy.cdm.model.description.SpecimenDescription;
  39 import eu.etaxonomy.cdm.model.media.Media;
  40 import eu.etaxonomy.cdm.model.molecular.DnaSample;
  41 import eu.etaxonomy.cdm.model.molecular.Sequence;
  42 import eu.etaxonomy.cdm.model.molecular.SingleRead;
  43 import eu.etaxonomy.cdm.model.name.NonViralName;
  44 import eu.etaxonomy.cdm.model.occurrence.DerivedUnit;
  45 import eu.etaxonomy.cdm.model.occurrence.FieldUnit;
  46 import eu.etaxonomy.cdm.model.occurrence.MediaSpecimen;
  47 import eu.etaxonomy.cdm.model.occurrence.SpecimenOrObservationType;
  48 import eu.etaxonomy.cdm.model.reference.Reference;
  49 import eu.etaxonomy.cdm.model.taxon.TaxonBase;
  50 import eu.etaxonomy.cdm.model.taxon.TaxonRelationship;
  51 import eu.etaxonomy.taxeditor.model.AbstractUtility;
  52 import eu.etaxonomy.taxeditor.model.FeatureNodeContainer;
  53 import eu.etaxonomy.taxeditor.model.IDerivedUnitFacadePart;
  54 import eu.etaxonomy.taxeditor.model.MessagingUtils;
  55 import eu.etaxonomy.taxeditor.model.PolytomousKeyRelationship;
  56 import eu.etaxonomy.taxeditor.preference.IPreferenceKeys;
  57 import eu.etaxonomy.taxeditor.preference.PreferencesUtil;
  58 import eu.etaxonomy.taxeditor.store.UsageTermCollection;
  59 import eu.etaxonomy.taxeditor.ui.element.AbstractFormSection;
  60 import eu.etaxonomy.taxeditor.ui.element.RootElement;
  61 import eu.etaxonomy.taxeditor.ui.section.agent.PersonDetailSection;
  62 import eu.etaxonomy.taxeditor.ui.section.agent.TeamDetailSection;
  63 import eu.etaxonomy.taxeditor.ui.section.agent.TeamOrPersonBaseDetailSection;
  64 import eu.etaxonomy.taxeditor.ui.section.common.ReferencedEntityDetailSection;
  65 import eu.etaxonomy.taxeditor.ui.section.description.DescribedSpecimenSection;
  66 import eu.etaxonomy.taxeditor.ui.section.description.DescriptionDetailSection;
  67 import eu.etaxonomy.taxeditor.ui.section.description.DescriptionElementDetailSection;
  68 import eu.etaxonomy.taxeditor.ui.section.description.DescriptionElementMediaSection;
  69 import eu.etaxonomy.taxeditor.ui.section.description.DescriptionElementSourceSection;
  70 import eu.etaxonomy.taxeditor.ui.section.description.DescriptionSourceSection;
  71 import eu.etaxonomy.taxeditor.ui.section.description.MediaDetailsSection;
  72 import eu.etaxonomy.taxeditor.ui.section.description.NaturalLanguageSection;
  73 import eu.etaxonomy.taxeditor.ui.section.description.ScopeSection;
  74 import eu.etaxonomy.taxeditor.ui.section.feature.FeatureDistributionDetailSection;
  75 import eu.etaxonomy.taxeditor.ui.section.grantedAuthority.GrantedAuthorityDetailSection;
  76 import eu.etaxonomy.taxeditor.ui.section.group.GroupDetailSection;
  77 import eu.etaxonomy.taxeditor.ui.section.group.MemberDetailSection;
  78 import eu.etaxonomy.taxeditor.ui.section.identifier.IdentifierDetailSection;
  79 import eu.etaxonomy.taxeditor.ui.section.key.PolytomousKeyDetailSection;
  80 import eu.etaxonomy.taxeditor.ui.section.key.PolytomousKeyNodeDetailSection;
  81 import eu.etaxonomy.taxeditor.ui.section.name.NameRelationshipDetailSection;
  82 import eu.etaxonomy.taxeditor.ui.section.name.NomenclaturalStatusSection;
  83 import eu.etaxonomy.taxeditor.ui.section.name.NonViralNameDetailSection;
  84 import eu.etaxonomy.taxeditor.ui.section.name.ProtologueSection;
  85 import eu.etaxonomy.taxeditor.ui.section.name.TypeDesignationSection;
  86 import eu.etaxonomy.taxeditor.ui.section.occurrence.DerivedUnitBaseDetailSection;
  87 import eu.etaxonomy.taxeditor.ui.section.occurrence.DerivedUnitGeneralDetailSection;
  88 import eu.etaxonomy.taxeditor.ui.section.occurrence.DeterminationDetailSection;
  89 import eu.etaxonomy.taxeditor.ui.section.occurrence.EmptySection;
  90 import eu.etaxonomy.taxeditor.ui.section.occurrence.FieldUnitDetailSection;
  91 import eu.etaxonomy.taxeditor.ui.section.occurrence.FieldUnitGeneralDetailSection;
  92 import eu.etaxonomy.taxeditor.ui.section.occurrence.GatheringEventDetailSection;
  93 import eu.etaxonomy.taxeditor.ui.section.occurrence.association.DerivedUnitTypeDesignationSection;
  94 import eu.etaxonomy.taxeditor.ui.section.occurrence.association.TaxonAssociationDetailSection;
  95 import eu.etaxonomy.taxeditor.ui.section.occurrence.dna.DnaQualityDetailSection;
  96 import eu.etaxonomy.taxeditor.ui.section.occurrence.dna.DnaSampleGeneralDetailSection;
  97 import eu.etaxonomy.taxeditor.ui.section.occurrence.dna.DnaSamplePreparationPreservationSection;
  98 import eu.etaxonomy.taxeditor.ui.section.occurrence.dna.SampleDesignationDetailSection;
  99 import eu.etaxonomy.taxeditor.ui.section.occurrence.dna.SequenceContigFileCollectionDetailSection;
 100 import eu.etaxonomy.taxeditor.ui.section.occurrence.dna.SequenceGeneralDetailSection;
 101 import eu.etaxonomy.taxeditor.ui.section.occurrence.dna.SequenceReferenceCollectionDetailSection;
 102 import eu.etaxonomy.taxeditor.ui.section.occurrence.dna.SingleReadGeneralDetailSection;
 103 import eu.etaxonomy.taxeditor.ui.section.occurrence.dna.SingleReadPherogramCollectionDetailSection;
 104 import eu.etaxonomy.taxeditor.ui.section.occurrence.dna.TissueSampleGeneralDetailSection;
 105 import eu.etaxonomy.taxeditor.ui.section.occurrence.media.MediaSpecimenGeneralDetailSection;
 106 import eu.etaxonomy.taxeditor.ui.section.reference.NomenclaturalReferenceDetailSection;
 107 import eu.etaxonomy.taxeditor.ui.section.reference.ReferenceDetailSection;
 108 import eu.etaxonomy.taxeditor.ui.section.supplemental.RightsSection;
 109 import eu.etaxonomy.taxeditor.ui.section.taxon.ParsingMessagesSection;
 110 import eu.etaxonomy.taxeditor.ui.section.taxon.TaxonBaseDetailSection;
 111 import eu.etaxonomy.taxeditor.ui.section.taxon.TaxonRelationshipDetailSection;
 112 import eu.etaxonomy.taxeditor.ui.section.user.GroupsByUserDetailSection;
 113 import eu.etaxonomy.taxeditor.ui.section.user.UserDetailSection;
 114 import eu.etaxonomy.taxeditor.ui.section.userecords.UseRecordDetailSection;
 115 import eu.etaxonomy.taxeditor.ui.section.vocabulary.TermVocabularyDetailSection;
 116 import eu.etaxonomy.taxeditor.view.AbstractCdmDataViewer;
 117 import eu.etaxonomy.taxeditor.view.AbstractCdmViewPart;
 118
 119 /**
 120  *
 121  * The DetailsViewer handles the content of the details view (
 122  * {@link DetailsViewPart}).<br>
 123  * Depending on the type of the selected element the section of the details view
 124  * are created.
 125  *
 126  * @author n.hoffmann
 127  * @created Feb 12, 2010
 128  * @version 1.0
 129  */
 130 public class DetailsViewer extends AbstractCdmDataViewer {
 131
 132     private ISelection selection;
 133
 134     public DetailsViewer(Composite parent, AbstractCdmViewPart viewPart) {
 135         super(parent, viewPart);
 136     }
 137
 138     // START HACK TO MAKE THE DERIVED UNIT FACADE WORK
 139     // since we are getting implementations of DerivedUnitBase from the bulk
 140     // editor
 141     // and not derived unit facade objects,
 142
 143     @Override
 144     public void setInput(Object input) {
 145         if(input instanceof TreeNode){
 146             input = ((TreeNode) input).getValue();
 147         }
 148         if(input instanceof GbifResponse){
 149             input = ((GbifResponse) input).getDerivedUnitFacade();
 150         }
 151         if (input.getClass().equals(DerivedUnit.class)) {
 152             DerivedUnit derivedUnit = (DerivedUnit)input;
 153             try {
 154                 input = DerivedUnitFacade.NewInstance(derivedUnit,
 155                         PreferencesUtil.getDerivedUnitConfigurator());
 156             } catch (DerivedUnitFacadeNotSupportedException e) {
 157 //                MessagingUtils.error(getClass(), e); //nothing should happen, later on the Details View will show an according information that it is not possible to open this data
 158             }
 159         }
 160         else if(input instanceof FieldUnit){
 161             input = DerivedUnitFacade.NewInstance(SpecimenOrObservationType.FieldUnit, (FieldUnit) input);
 162         }
 163         super.setInput(input);
 164     }
 165
 166     @Override
 167     protected void markViewPartDirty() {
 168         if (getInput() instanceof DerivedUnitFacade) {
 169             DerivedUnitFacade facade = (DerivedUnitFacade) getInput();
 170             if(facade.innerDerivedUnit()!=null){
 171                 getViewPart().changed(facade.innerDerivedUnit());
 172             }
 173             else if(facade.innerFieldUnit()!=null){
 174                 getViewPart().changed(facade.innerFieldUnit());
 175             }
 176         }
 177         else{
 178             super.markViewPartDirty();
 179         }
 180     }
 181
 182     // END HACK TO MAKE THE DERIVED UNIT FACADE WORK
 183
 184
 185     /** {@inheritDoc} */
 186     @Override
 187     protected void showParts() {
 188         // FIXME (CM) : Need to clean out this code.
 189         // Too much type checking to decide which detail view to display.
 190         // Need to build in a mechanism where navigators / editors are 'aware'
 191         // of the corresponding detail viewer.
 192         Object input = getInput();
 193
 194         destroySections();
 195         if (input instanceof TaxonBase) {
 196             if(((TaxonBase) input).getName()==null){
 197                 createEmptySection(rootElement);
 198             }
 199             else{
 200                 createTaxonSections(rootElement);
 201             }
 202
 203         } else if (input instanceof NonViralName) {
 204             createNameSections(rootElement);
 205
 206         } else if (input instanceof Reference) {
 207             createReferenceSections(rootElement);
 208
 209         } else if (input instanceof Team) {
 210             createTeamDetailSection(rootElement);
 211
 212         } else if (input instanceof Person) {
 213             createPersonDetailSection(rootElement);
 214
 215         } else if (input instanceof TeamOrPersonBase) {
 216             createTeamOrPersonBaseDetailSection(rootElement);
 217
 218         } else if (input instanceof DescriptionBase) {
 219             if(input instanceof SpecimenDescription){
 220                 //TODO: add more sections to DetailsView for SpecimenDescription
 221                 createSpecimenDescriptionSection(rootElement);
 222             }
 223             else{
 224                 Set<Marker> descriptionMarkers = ((DescriptionBase<?>) input).getMarkers();
 225
 226                 Boolean isUseDescription = false;
 227                 for (Marker marker : descriptionMarkers) {
 228                     if (marker.getMarkerType()!= null && marker.getMarkerType().getUuid().equals(UsageTermCollection.uuidUseMarkerType)) {
 229                         isUseDescription = true;
 230                     }
 231                 }
 232                 if (((DescriptionBase<?>) input).isImageGallery()) {
 233                     createImageGallerySection(rootElement);
 234
 235                 } else if (isUseDescription) {
 236                     createUseDescriptionSection(rootElement);
 237                 } else {
 238                     createDescriptionSection(rootElement);
 239
 240                 }
 241             }
 242         } else if (input instanceof DescriptionElementBase) {
 243             Set<Marker> descriptionMarkers = ((DescriptionElementBase) input).getInDescription().getMarkers();
 244
 245             Boolean isUseDescription = false;
 246             for (Marker marker : descriptionMarkers) {
 247                 if (marker.getMarkerType()!= null && marker.getMarkerType().getUuid().equals(UsageTermCollection.uuidUseMarkerType)) {
 248                     isUseDescription = true;
 249                 }
 250             }
 251
 252             if (isUseDescription == true && input instanceof CategoricalData) {
 253                 createUseRecordSection(rootElement);
 254             } else {
 255                 createDescriptionElementSection(rootElement);
 256             }
 257
 258         } else if (input instanceof Media) {
 259             createMediaElementSection(rootElement);
 260
 261         } else if (input instanceof DerivedUnitFacade) {
 262             if(((DerivedUnitFacade) input).getType()==SpecimenOrObservationType.FieldUnit){
 263                 if(((DerivedUnitFacade) input).innerFieldUnit()==null){
 264                     MessagingUtils.error(DetailsViewer.class, "FieldUnit of facade is null", null);
 265                 }
 266                 else{
 267                     createFieldUnitSection(rootElement);
 268                 }
 269             }
 270             else if(((DerivedUnitFacade) input).getType()==SpecimenOrObservationType.PreservedSpecimen){
 271                 if(((DerivedUnitFacade) input).innerDerivedUnit()==null){
 272                     MessagingUtils.error(DetailsViewer.class, "DerivedUnit of facade is null", null);
 273                 }
 274                 else{
 275                     createDerivedUnitBaseElementSection(rootElement);
 276                 }
 277             }
 278             else if(((DerivedUnitFacade) input).getType()==SpecimenOrObservationType.TissueSample){
 279                 //TissueSample should only be created by using it's own class
 280                 //in future using only one class with different SpecimenOrObservationTypes is desired
 281 //                createTissueSampleSection(rootElement);
 282             }
 283             else{
 284                 createDerivedUnitBaseElementSection(rootElement);
 285             }
 286         } else if (input instanceof DnaSample){
 287             DnaSample dnaSample = (DnaSample)input;
 288             if(dnaSample.getRecordBasis()==SpecimenOrObservationType.TissueSample){
 289                 createTissueSampleSection(rootElement);
 290             }
 291             else if(dnaSample.getRecordBasis()==SpecimenOrObservationType.DnaSample){
 292                 createDnaSampleSection(rootElement);
 293             }
 294         } else if (input instanceof MediaSpecimen){
 295             createMediaSpecimenSection(rootElement);
 296         }
 297         else if(input instanceof Sequence){
 298             createSequenceSection(rootElement);
 299         }
 300         else if(input instanceof SingleRead){
 301             createSingleReadSection(rootElement);
 302         }
 303         else if (input instanceof FeatureNodeContainer) {
 304             createFeatureDistributionSection(rootElement);
 305
 306         }else if ((input instanceof PolytomousKeyNode) || (input instanceof PolytomousKeyRelationship)) {
 307             createPolytomousKeyNodeSection(rootElement);
 308         } else if (input instanceof User) {
 309             createUserSection(rootElement);
 310         } else if (input instanceof Group) {
 311             createGroupSection(rootElement);
 312         } else if (input instanceof TaxonRelationship) {
 313             createTaxonRelationshipSection(rootElement);
 314         } else if (input instanceof TermVocabulary) {
 315             createTermVocabularySection(rootElement);
 316         } else if (input instanceof DefinedTermBase) {
 317             createDefinedTermSection(rootElement);
 318         }
 319         else {
 320             createEmptySection(rootElement);
 321         }
 322         layout();
 323     }
 324
 325
 326     private void createEmptySection(RootElement parent) {
 327         destroySections();
 328
 329         EmptySection emptySection = formFactory.createEmptySection(formFactory, parent, SWT.NONE);
 330
 331         addPart(emptySection);
 332     }
 333
 334     private void createGroupSection(RootElement parent) {
 335         destroySections();
 336
 337         GroupDetailSection groupDetailSection = formFactory.createGroupDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE| ExpandableComposite.EXPANDED);
 338         MemberDetailSection memberDetailSection = formFactory.createMemberDetailSection(getConversationHolder(), parent, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
 339         GrantedAuthorityDetailSection grantedAuthorityDetailSection = formFactory.createGrantedAuthorityDetailSection(getConversationHolder(), parent,ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
 340
 341         addPart(groupDetailSection);
 342         addPart(memberDetailSection);
 343         addPart(grantedAuthorityDetailSection);
 344     }
 345
 346     /** {@inheritDoc} */
 347     @Override
 348     public ISelection getSelection() {
 349         return selection;
 350     }
 351
 352     /** {@inheritDoc} */
 353     @Override
 354     public void setSelection(ISelection selection, boolean reveal) {
 355         this.selection = selection;
 356         if(this.selection!=null){
 357             SelectionChangedEvent selectionChangedEvent = new SelectionChangedEvent(this, selection);
 358             fireSelectionChanged(selectionChangedEvent);
 359         }
 360     }
 361
 362     private void createTaxonSections(RootElement parent) {
 363         destroySections();
 364
 365         ParsingMessagesSection parsingMessagesSection = formFactory.createParsingMessagesSection(getConversationHolder(), parent, this,
 366                 ExpandableComposite.EXPANDED | ExpandableComposite.EXPANDED);
 367
 368         TaxonBaseDetailSection taxonBaseDetailSection = formFactory.createTaxonBaseDetailSection(getConversationHolder(), parent, this,
 369                         ExpandableComposite.TWISTIE     | ExpandableComposite.EXPANDED);
 370         formFactory.createHorizontalSeparator(parent, SWT.BORDER);
 371
 372         NonViralNameDetailSection nonViralNameSection = formFactory.createNonViralNameDetailSection(getConversationHolder(), parent, this,
 373                         ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
 374         formFactory.createHorizontalSeparator(parent, SWT.BORDER);
 375
 376         NomenclaturalReferenceDetailSection referenceDetailSection = formFactory.createNomenclaturalReferenceDetailSection(getConversationHolder(), parent, this,
 377                         ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
 378         formFactory.createHorizontalSeparator(parent, SWT.BORDER);
 379
 380         NomenclaturalStatusSection nomenclaturalStatusSection = formFactory.createNomenclaturalStatusSection(getConversationHolder(), parent,
 381                         ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
 382         formFactory.createHorizontalSeparator(parent, SWT.BORDER);
 383
 384         //TODO RL
 385         if(!PreferencesUtil.getPreferenceStore().getBoolean(IPreferenceKeys.IS_RL)){
 386                 ProtologueSection protologSection = formFactory.createProtologueSection(getConversationHolder(), parent, ExpandableComposite.TWISTIE);
 387                 formFactory.createHorizontalSeparator(parent, SWT.BORDER);
 388
 389                 TypeDesignationSection typeDesignationSection = formFactory.createTypeDesignationSection(getConversationHolder(), parent, ExpandableComposite.TWISTIE);
 390                 formFactory.createHorizontalSeparator(parent, SWT.BORDER);
 391
 392                 NameRelationshipDetailSection nameRelationshipSection = formFactory.createNameRelationshipDetailSection(getConversationHolder(), parent, ExpandableComposite.TWISTIE);
 393                 formFactory.createHorizontalSeparator(parent, SWT.BORDER);
 394
 395                         addPart(protologSection);
 396                         addPart(typeDesignationSection);
 397                         addPart(nameRelationshipSection);
 398         }
 399
 400         addPart(parsingMessagesSection);
 401         addPart(taxonBaseDetailSection);
 402         addPart(nonViralNameSection);
 403         addPart(nomenclaturalStatusSection);
 404         addPart(referenceDetailSection);
 405     }
 406
 407     private void createNameSections(RootElement parent) {
 408         destroySections();
 409         NonViralNameDetailSection nonViralNameSection = formFactory.createNonViralNameDetailSection(getConversationHolder(), parent, this,
 410                         ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
 411         formFactory.createHorizontalSeparator(parent, SWT.BORDER);
 412
 413         NomenclaturalReferenceDetailSection referenceDetailSection = formFactory.createNomenclaturalReferenceDetailSection(getConversationHolder(), parent, this,
 414                         ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
 415         formFactory.createHorizontalSeparator(parent, SWT.BORDER);
 416
 417         NomenclaturalStatusSection nomenclaturalStatusSection = formFactory.createNomenclaturalStatusSection(getConversationHolder(), parent,
 418                         ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
 419         formFactory.createHorizontalSeparator(parent, SWT.BORDER);
 420
 421         addPart(nonViralNameSection);
 422         addPart(nomenclaturalStatusSection);
 423         addPart(referenceDetailSection);
 424 //TODO RL
 425         if(!PreferencesUtil.getPreferenceStore().getBoolean(IPreferenceKeys.IS_RL)){
 426                         ProtologueSection protologSection = formFactory.createProtologueSection(getConversationHolder(), parent, ExpandableComposite.TWISTIE);
 427                 formFactory.createHorizontalSeparator(parent, SWT.BORDER);
 428
 429                 TypeDesignationSection typeDesignationSection = formFactory.createTypeDesignationSection(getConversationHolder(), parent, ExpandableComposite.TWISTIE);
 430                 formFactory.createHorizontalSeparator(parent, SWT.BORDER);
 431
 432                 NameRelationshipDetailSection nameRelationshipSection = formFactory.createNameRelationshipDetailSection(getConversationHolder(), parent, ExpandableComposite.TWISTIE);
 433                 formFactory.createHorizontalSeparator(parent, SWT.BORDER);
 434                 addPart(protologSection);
 435                 addPart(typeDesignationSection);
 436                 addPart(nameRelationshipSection);
 437         }
 438     }
 439
 440     private void createReferenceSections(RootElement parent) {
 441         destroySections();
 442
 443         ReferenceDetailSection referenceDetailSection = formFactory.createReferenceDetailSection(getConversationHolder(), parent, this,
 444                         ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
 445
 446         addPart(referenceDetailSection);
 447     }
 448
 449     private void createTeamOrPersonBaseDetailSection(RootElement parent) {
 450         destroySections();
 451         TeamOrPersonBaseDetailSection teamOrPersonBaseDetailSection = formFactory.createTeamOrPersonBaseDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
 452
 453         addPart(teamOrPersonBaseDetailSection);
 454     }
 455
 456     private void createTeamDetailSection(RootElement parent) {
 457         destroySections();
 458         TeamDetailSection teamDetailSection = formFactory.createTeamDetailSection(getConversationHolder(), parent, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
 459
 460         addPart(teamDetailSection);
 461     }
 462
 463     private void createPersonDetailSection(RootElement parent) {
 464         destroySections();
 465         PersonDetailSection personDetailSection = formFactory.createPersonDetailSection(getConversationHolder(), parent, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
 466         addPart(personDetailSection);
 467     }
 468
 469     private void createDescriptionElementSection(RootElement parent) {
 470         destroySections();
 471
 472         DescriptionElementDetailSection descriptionElementDetailSection = formFactory.createDescriptionElementDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
 473
 474         formFactory.createHorizontalSeparator(parent, SWT.BORDER);
 475
 476         DescriptionElementSourceSection descriptionElementSourceSection = formFactory.createDescriptionElementSourceSection(getConversationHolder(), parent, ExpandableComposite.TWISTIE);
 477
 478         formFactory.createHorizontalSeparator(parent, SWT.BORDER);
 479
 480         DescriptionElementMediaSection descriptionElementMediaSection = formFactory.createDescriptionElementMediaSection(getConversationHolder(), parent, ExpandableComposite.TWISTIE);
 481
 482         formFactory.createHorizontalSeparator(parent, SWT.BORDER);
 483
 484         addPart(descriptionElementDetailSection);
 485         addPart(descriptionElementSourceSection);
 486         addPart(descriptionElementMediaSection);
 487     }
 488
 489     private void createDescriptionSection(RootElement parent) {
 490         destroySections();
 491         DescriptionDetailSection descriptionDetailSection = formFactory.createDescriptionDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
 492
 493         formFactory.createHorizontalSeparator(parent, SWT.BORDER);
 494
 495         NaturalLanguageSection naturalLanguageSection = formFactory.createNaturalLanguageSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
 496
 497         formFactory.createHorizontalSeparator(parent, SWT.BORDER);
 498
 499         DescribedSpecimenSection describedSpecimenSection = formFactory.createDescribedSpecimenSection(getConversationHolder(), parent, ExpandableComposite.TWISTIE);
 500
 501         formFactory.createHorizontalSeparator(parent, SWT.BORDER);
 502
 503         //              DescriptionSourceSection descriptionSourceSection = (DescriptionSourceSection) formFactory
 504         //                              .createEntityDetailSection(EntityDetailType.DESCRIPTIONSOURCE,
 505         //                                              getConversationHolder(), parent, Section.TWISTIE);
 506         //
 507         //              formFactory.createHorizontalSeparator(parent, SWT.BORDER);
 508
 509         ScopeSection scopeSection = formFactory.createScopeSection(getConversationHolder(), parent, ExpandableComposite.TWISTIE);
 510
 511         formFactory.createHorizontalSeparator(parent, SWT.BORDER);
 512
 513         addPart(descriptionDetailSection);
 514         addPart(naturalLanguageSection);
 515         addPart(describedSpecimenSection);
 516         //              addPart(descriptionSourceSection);
 517         addPart(scopeSection);
 518     }
 519
 520     private void createSpecimenDescriptionSection(RootElement parent) {
 521         destroySections();
 522         DescriptionDetailSection descriptionDetailSection = formFactory.createDescriptionDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
 523         addPart(descriptionDetailSection);
 524     }
 525
 526     private void createUseDescriptionSection(RootElement parent) {
 527         destroySections();
 528         DescriptionDetailSection descriptionDetailSection = formFactory.createDescriptionDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
 529
 530         formFactory.createHorizontalSeparator(parent, SWT.BORDER);
 531
 532         DescriptionSourceSection descriptionSourceSection = formFactory.createDescriptionSourceSection(getConversationHolder(), parent, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
 533
 534         formFactory.createHorizontalSeparator(parent, SWT.BORDER);
 535
 536         addPart(descriptionDetailSection);
 537         addPart(descriptionSourceSection);
 538
 539     }
 540
 541     private void createImageGallerySection(RootElement parent) {
 542         destroySections();
 543         DescriptionDetailSection descriptionDetailSection = formFactory.createDescriptionDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
 544
 545         addPart(descriptionDetailSection);
 546     }
 547
 548     private void createMediaElementSection(RootElement parent) {
 549         destroySections();
 550
 551         MediaDetailsSection mediaDetailSection = formFactory.createMediaDetailsSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
 552
 553         addPart(mediaDetailSection);
 554     }
 555
 556     private void createDerivedUnitBaseElementSection(RootElement parent) {
 557         destroySections();
 558
 559         DerivedUnitGeneralDetailSection derivedUnitGeneralDetailSection = formFactory.createDerivedUnitGeneralDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
 560         //TODO for DerivateEditor do not use facade anymore to avoid this special case handling #4539
 561         if(!(AbstractUtility.getActivePart() instanceof IDerivedUnitFacadePart)){
 562             derivedUnitGeneralDetailSection.setShowOnlyDerivedUnitData(true);
 563         }
 564         addPart(derivedUnitGeneralDetailSection);
 565
 566         formFactory.createHorizontalSeparator(parent, SWT.BORDER);
 567
 568         DerivedUnitBaseDetailSection derivedUnitBaseDetailSection = formFactory.createDerivedUnitBaseDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
 569         addPart(derivedUnitBaseDetailSection);
 570
 571         //for editors working with facades
 572         if(AbstractUtility.getActivePart() instanceof IDerivedUnitFacadePart){
 573             formFactory.createHorizontalSeparator(parent, SWT.BORDER);
 574             GatheringEventDetailSection gatheringEventDetailSection = formFactory.createGatheringEventDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE);
 575             addPart(gatheringEventDetailSection);
 576
 577             formFactory.createHorizontalSeparator(parent, SWT.BORDER);
 578             FieldUnitDetailSection fieldUnitDetailSection = formFactory.createFieldUnitDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE);
 579             addPart(fieldUnitDetailSection);
 580         }
 581         else{
 582
 583             if(PreferencesUtil.getPreferenceStore().getBoolean(IPreferenceKeys.SHOW_TAXON_ASSOCIATIONS)){
 584                 formFactory.createHorizontalSeparator(parent, SWT.BORDER);
 585                 TaxonAssociationDetailSection taxonAssociationDetailSection = formFactory.createTaxonAssociationDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
 586                 addPart(taxonAssociationDetailSection);
 587             }
 588             formFactory.createHorizontalSeparator(parent, SWT.BORDER);
 589             IdentifierDetailSection identifierDetailSection = formFactory.createIdentifierDetailSection(getConversationHolder(), parent, ExpandableComposite.TWISTIE);
 590             addPart(identifierDetailSection);
 591         }
 592         if(!PreferencesUtil.getPreferenceStore().getBoolean(IPreferenceKeys.DETERMINATION_ONLY_FOR_FIELD_UNITS)){
 593             formFactory.createHorizontalSeparator(parent, SWT.BORDER);
 594             DeterminationDetailSection determinationDetailSection = formFactory.createDeterminationDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE);
 595             addPart(determinationDetailSection);
 596         }
 597
 598         formFactory.createHorizontalSeparator(parent, SWT.BORDER);
 599         DerivedUnitTypeDesignationSection derivedUnitTypeDesignationSection = formFactory.createDerivedUnitTypeDesignationSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
 600         addPart(derivedUnitTypeDesignationSection);
 601
 602     }
 603
 604     private void createFieldUnitSection(RootElement parent) {
 605         destroySections();
 606
 607         FieldUnitGeneralDetailSection fielUnitGeneralDetailSection = formFactory.createFieldUnitGeneralDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
 608
 609         formFactory.createHorizontalSeparator(parent, SWT.BORDER);
 610
 611         GatheringEventDetailSection gatheringEventDetailSection = formFactory.createGatheringEventDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE);
 612
 613         formFactory.createHorizontalSeparator(parent, SWT.BORDER);
 614
 615         FieldUnitDetailSection fieldUnitDetailSection = formFactory.createFieldUnitDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE);
 616
 617         addPart(fielUnitGeneralDetailSection);
 618         addPart(gatheringEventDetailSection);
 619         addPart(fieldUnitDetailSection);
 620
 621         if(PreferencesUtil.getPreferenceStore().getBoolean(IPreferenceKeys.DETERMINATION_ONLY_FOR_FIELD_UNITS)){
 622             formFactory.createHorizontalSeparator(parent, SWT.BORDER);
 623             DeterminationDetailSection determinationDetailSection = formFactory.createDeterminationDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE);
 624             addPart(determinationDetailSection);
 625         }
 626     }
 627
 628     private void createTissueSampleSection(RootElement parent) {
 629         destroySections();
 630
 631         TissueSampleGeneralDetailSection section = formFactory.createTissueSampleGeneralDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
 632
 633         formFactory.createHorizontalSeparator(parent, SWT.BORDER);
 634
 635         SampleDesignationDetailSection sampleDesignationDetailSection = formFactory.createSampleDesignationDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
 636
 637         addPart(section);
 638         addPart(sampleDesignationDetailSection);
 639     }
 640
 641     private void createDnaSampleSection(RootElement parent) {
 642         destroySections();
 643
 644         DnaSampleGeneralDetailSection section = formFactory.createDnaSampleGeneralDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
 645
 646         formFactory.createHorizontalSeparator(parent, SWT.BORDER);
 647
 648         DnaSamplePreparationPreservationSection preparationPreservationSection = formFactory.createDnaSamplePreparationPreservationSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
 649
 650         formFactory.createHorizontalSeparator(parent, SWT.BORDER);
 651
 652         DnaQualityDetailSection qualitySection = formFactory.createDnaQualityDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
 653
 654         formFactory.createHorizontalSeparator(parent, SWT.BORDER);
 655
 656         SampleDesignationDetailSection sampleDesignationDetailSection = formFactory.createSampleDesignationDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
 657
 658         addPart(section);
 659         addPart(preparationPreservationSection);
 660         addPart(qualitySection);
 661         addPart(sampleDesignationDetailSection);
 662     }
 663
 664     private void createSequenceSection(RootElement parent) {
 665         destroySections();
 666
 667         SequenceGeneralDetailSection section = formFactory.createSequenceGeneralDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
 668
 669         formFactory.createHorizontalSeparator(parent, SWT.BORDER);
 670
 671         SequenceReferenceCollectionDetailSection referenceSection = formFactory.createSequenceReferenceCollectionDetailSection(getConversationHolder(), parent, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
 672
 673         formFactory.createHorizontalSeparator(parent, SWT.BORDER);
 674
 675         SequenceContigFileCollectionDetailSection contigFileSection = formFactory.createSequenceContigFileCollectionDetailSection(getConversationHolder(), parent, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
 676
 677
 678         addPart(section);
 679         addPart(referenceSection);
 680         addPart(contigFileSection);
 681     }
 682
 683     private void createSingleReadSection(RootElement parent) {
 684         destroySections();
 685
 686         SingleReadGeneralDetailSection section = formFactory.createSingleReadGeneralDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
 687         addPart(section);
 688
 689         formFactory.createHorizontalSeparator(parent, SWT.BORDER);
 690
 691         SingleReadPherogramCollectionDetailSection pherogramSection = formFactory.createSingleReadPherogramCollectionDetailSection(getConversationHolder(), parent, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
 692         addPart(pherogramSection);
 693
 694     }
 695
 696     private void createMediaSpecimenSection(RootElement parent) {
 697         destroySections();
 698
 699         MediaSpecimenGeneralDetailSection generalSection = formFactory.createMediaSpecimenGeneralDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
 700         addPart(generalSection);
 701
 702         formFactory.createHorizontalSeparator(parent, SWT.BORDER);
 703
 704         RightsSection rightsSection = formFactory.createRightsSection(getConversationHolder(), parent, ExpandableComposite.TWISTIE);
 705         addPart(rightsSection);
 706
 707     }
 708
 709     private void createFeatureDistributionSection(RootElement parent) {
 710         destroySections();
 711
 712         FeatureDistributionDetailSection featureDistributionSection = formFactory.createFeatureDistributionDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
 713
 714         addPart(featureDistributionSection);
 715     }
 716
 717     private void createPolytomousKeyNodeSection(RootElement parent) {
 718         destroySections();
 719
 720         PolytomousKeyDetailSection polytomousKeyDetailSection = formFactory.createPolytomousKeyDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE);
 721
 722         formFactory.createHorizontalSeparator(parent, SWT.BORDER);
 723
 724         PolytomousKeyNodeDetailSection polytomousKeyNodeDetailSection = formFactory.createPolytomousKeyNodeDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
 725
 726         addPart(polytomousKeyDetailSection);
 727         addPart(polytomousKeyNodeDetailSection);
 728
 729     }
 730
 731     private void createUseRecordSection(RootElement parent) {
 732         destroySections();
 733
 734         UseRecordDetailSection descriptionUseRecordSection = formFactory.createUseRecordDetailSection(getConversationHolder(), parent, this,ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
 735
 736         formFactory.createHorizontalSeparator(parent, SWT.BORDER);
 737
 738         addPart(descriptionUseRecordSection);
 739
 740
 741     }
 742
 743     private void createUserSection(RootElement parent) {
 744         destroySections();
 745
 746         UserDetailSection userDetailSection = formFactory.createUserDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
 747
 748         GroupsByUserDetailSection groupByUserDetailSection = formFactory.createGroupsByUserDetailSection(getConversationHolder(), parent, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
 749
 750         addPart(userDetailSection);
 751         addPart(groupByUserDetailSection);
 752     }
 753
 754     private void createTaxonRelationshipSection(RootElement parent) {
 755         destroySections();
 756
 757         TaxonRelationshipDetailSection taxonRelationshipDetailSection = formFactory.createTaxonRelationshipDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
 758
 759         ReferencedEntityDetailSection referencedEntityBaseDetailSection = formFactory.createReferencedEntityDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
 760         addPart(taxonRelationshipDetailSection);
 761         addPart(referencedEntityBaseDetailSection);
 762     }
 763
 764     private void createTermVocabularySection(RootElement parent) {
 765         destroySections();
 766
 767         TermVocabularyDetailSection termVocabularyDetailSection = formFactory.createTermVocabularyDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
 768         addPart(termVocabularyDetailSection);
 769     }
 770
 771     private void createDefinedTermSection(RootElement parent) {
 772         destroySections();
 773
 774         AbstractFormSection<?> definedTermDetailSection = formFactory.createDefinedTermDetailSection(getInput().getClass(), getConversationHolder(), parent, this, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
 775         addPart(definedTermDetailSection);
 776     }
 777
 778 }