eu.etaxonomy.taxeditor.molecular.lib/pom.xml

   1 <project>
   2   <modelVersion>4.0.0</modelVersion>
   3   <groupId>eu.etaxonomy.taxeditor</groupId>
   4   <artifactId>eu.etaxonomy.taxeditor.molecular.lib</artifactId>
   5   <packaging>eclipse-plugin</packaging>
   6
   7   <parent>
   8     <groupId>eu.etaxonomy</groupId>
   9     <artifactId>taxeditor-parent</artifactId>
  10     <version>4.7.0-SNAPSHOT</version>
  11   </parent>
  12
  13   <build>
  14     <plugins>
  15       <plugin>
  16         <groupId>org.apache.maven.plugins</groupId>
  17         <artifactId>maven-dependency-plugin</artifactId>
  18         <version>2.4</version>
  19         <executions>
  20           <execution>
  21             <id>copy-dependencies</id>
  22             <phase>validate</phase>
  23             <goals>
  24               <goal>copy-dependencies</goal>
  25             </goals>
  26             <configuration>
  27               <includeArtifactIds>libralign-core, libralign-swt, libralign-biojava1, libralign-io,
  28                 bioinfweb-commons-java-swt, bioinfweb-commons-java-core,
  29                 bioinfweb-commons-java-bio, bioinfweb-commons-java-swing,
  30                 tic-core, core, sequencing,
  31                 tic-swt, jphyloio-core, owlapi-xmlutils,
  32                 commons-lang3, commons-collections4, commons-beanutils</includeArtifactIds>
  33               <outputDirectory>lib</outputDirectory>
  34               <overWriteReleases>true</overWriteReleases>
  35               <overWriteSnapshots>true</overWriteSnapshots>
  36               <excludeTransitive>true</excludeTransitive>
  37             </configuration>
  38           </execution>
  39           <!-- <execution> -->
  40           <!-- <id>copy-dependencies-sources</id> -->
  41           <!-- <phase>validate</phase> -->
  42           <!-- <goals> -->
  43           <!-- <goal>copy-dependencies</goal> -->
  44           <!-- </goals> -->
  45           <!-- <configuration> -->
  46           <!-- <classifier>sources</classifier> -->
  47           <!-- <includeArtifactIds>cdmlib-commons,cdmlib-model,cdmlib-persistence,cdmlib-remote,cdmlib-print,cdmlib-services,cdmlib-ext,cdmlib-io</includeArtifactIds> -->
  48           <!-- <outputDirectory>lib</outputDirectory> -->
  49           <!-- <overWriteReleases>true</overWriteReleases> -->
  50           <!-- <overWriteSnapshots>true</overWriteSnapshots> -->
  51           <!-- <excludeTransitive>true</excludeTransitive> -->
  52           <!-- <failOnMissingClassifierArtifact>false</failOnMissingClassifierArtifact> -->
  53           <!-- </configuration> -->
  54           <!-- </execution> -->
  55         </executions>
  56       </plugin>
  57       <plugin>
  58         <groupId>org.apache.maven.plugins</groupId>
  59         <artifactId>maven-antrun-plugin</artifactId>
  60         <version>1.7</version>
  61         <executions>
  62           <execution>
  63             <id>remove-existing-jars</id>
  64             <phase>clean</phase>
  65             <goals>
  66               <goal>run</goal>
  67             </goals>
  68             <configuration>
  69               <target>
  70                 <echo>Remove all jars</echo>
  71                 <delete>
  72                   <fileset dir="./lib" includes="*" />
  73                 </delete>
  74               </target>
  75             </configuration>
  76           </execution>
  77
  78           <!-- The following should not be necessary anymore. -->
  79           <execution>
  80             <id>update-snapshot-jar-names</id>
  81             <phase>validate</phase>
  82             <goals>
  83               <goal>run</goal>
  84             </goals>
  85             <configuration>
  86               <target>
  87                 <echo>Update jars to SNAPSHOT when build with
  88                   timestamp</echo>
  89                 <move todir="./lib">
  90                   <fileset dir="./lib" />
  91                   <mapper type="regexp" from="(^bioinfweb\-.*\-[0-9]-)[0-9.-]+(\.jar)" to="\1SNAPSHOT\2" />
  92                 </move>
  93                 <move todir="./lib">
  94                   <fileset dir="./lib" />
  95                   <mapper type="regexp" from="(^libralign\-.*\-[0-9]-)[0-9.-]+(\.jar)" to="\1SNAPSHOT\2" />
  96                 </move>
  97                 <move todir="./lib">
  98                   <fileset dir="./lib" />
  99                   <mapper type="regexp" from="(^tic\-.*\-[0-9]-)[0-9.-]+(\.jar)" to="\1SNAPSHOT\2" />
 100                 </move>
 101                 <move todir="./lib">
 102                   <fileset dir="./lib" />
 103                   <mapper type="regexp" from="(^jphyloio\-.*\-[0-9]-)[0-9.-]+(\.jar)" to="\1SNAPSHOT\2" />
 104                 </move>
 105               </target>
 106             </configuration>
 107           </execution>
 108         </executions>
 109       </plugin>
 110     </plugins>
 111   </build>
 112
 113   <dependencies>
 114     <!-- Apache commons -->
 115     <dependency>
 116         <groupId>org.apache.commons</groupId>
 117         <artifactId>commons-lang3</artifactId>
 118         <version>3.5</version>
 119     </dependency>
 120     <dependency>
 121       <groupId>org.apache.commons</groupId>
 122       <artifactId>commons-collections4</artifactId>
 123       <version>4.1</version>
 124     </dependency>
 125     <dependency>
 126       <groupId>commons-beanutils</groupId>
 127       <artifactId>commons-beanutils</artifactId>
 128       <version>1.9.2</version>
 129     </dependency>
 130
 131     <!-- bioinfweb.commons -->
 132     <dependency>
 133       <groupId>info.bioinfweb.commons.java</groupId>
 134       <artifactId>bioinfweb-commons-java-core</artifactId>
 135       <version>2.2.0</version>
 136     </dependency>
 137     <dependency>
 138       <groupId>info.bioinfweb.commons.java</groupId>
 139       <artifactId>bioinfweb-commons-java-swt</artifactId>
 140       <version>2.0.0</version>
 141     </dependency>
 142     <dependency>
 143       <groupId>info.bioinfweb.commons.java</groupId>
 144       <artifactId>bioinfweb-commons-java-bio</artifactId>
 145       <version>2.0.0</version>
 146     </dependency>
 147     <dependency>
 148       <groupId>info.bioinfweb.commons.java</groupId>
 149       <artifactId>bioinfweb-commons-java-swing</artifactId>
 150       <version>2.2.0</version>
 151     </dependency>
 152
 153     <!-- TIC -->
 154     <dependency>
 155       <groupId>info.bioinfweb.tic</groupId>
 156       <artifactId>tic-core</artifactId>
 157       <version>2.0.0</version>
 158     </dependency>
 159     <dependency>
 160       <groupId>info.bioinfweb.tic</groupId>
 161       <artifactId>tic-swt</artifactId>
 162       <version>2.0.0</version>
 163     </dependency>
 164
 165     <!-- BioJava -->
 166     <dependency>
 167       <groupId>org.biojava</groupId>
 168       <artifactId>core</artifactId>
 169       <version>1.9.2</version>
 170     </dependency>
 171     <dependency>
 172       <groupId>org.biojava</groupId>
 173       <artifactId>sequencing</artifactId>
 174       <version>1.9.2</version>
 175     </dependency>
 176
 177     <!-- LibrAlign -->
 178     <dependency>
 179       <groupId>info.bioinfweb.libralign</groupId>
 180       <artifactId>libralign-core</artifactId>
 181       <version>0.4.0</version>
 182     </dependency>
 183     <dependency>
 184       <groupId>info.bioinfweb.libralign</groupId>
 185       <artifactId>libralign-swt</artifactId>
 186       <version>0.4.0</version>
 187     </dependency>
 188     <dependency>
 189       <groupId>info.bioinfweb.libralign</groupId>
 190       <artifactId>libralign-biojava1</artifactId>
 191       <version>0.4.0</version>
 192     </dependency>
 193     <dependency>
 194       <groupId>info.bioinfweb.libralign</groupId>
 195       <artifactId>libralign-io</artifactId>
 196       <version>0.4.0</version>
 197     </dependency>
 198
 199     <!-- JPhyloIO -->
 200     <dependency>
 201       <groupId>info.bioinfweb.jphyloio</groupId>
 202       <artifactId>jphyloio-core</artifactId>
 203       <version>0.3.0</version>
 204     </dependency>
 205     <dependency>
 206       <groupId>info.bioinfweb.thirdparty.owlapi</groupId>
 207       <artifactId>owlapi-xmlutils</artifactId>
 208       <version>4.1.4</version>
 209     </dependency>
 210   </dependencies>
 211
 212   <repositories>
 213     <repository>
 214       <id>bioinfweb-maven-repo</id>
 215       <name>bioinfweb repository</name>
 216       <url>http://bioinfweb.info/MavenRepository/</url>
 217     </repository>
 218     <!-- <repository>
 219       <id>central-maven-repo</id>
 220       <name>Maven Central</name>
 221       <url>http://central.maven.org/maven2/</url>
 222     </repository> -->
 223   </repositories>
 224 </project>
 225