3 * Copyright (C) 2013 EDIT
4 * European Distributed Institute of Taxonomy
5 * http://www.e-taxonomy.eu
7 * The contents of this file are subject to the Mozilla Public License Version 1.1
8 * See LICENSE.TXT at the top of this package for the full license terms.
10 package eu
.etaxonomy
.taxeditor
.dataimport
.transientServices
;
12 import java
.io
.IOException
;
13 import java
.util
.Collection
;
14 import java
.util
.EnumSet
;
15 import java
.util
.List
;
18 import java
.util
.UUID
;
20 import org
.apache
.lucene
.index
.CorruptIndexException
;
21 import org
.apache
.lucene
.queryParser
.ParseException
;
22 import org
.hibernate
.LockMode
;
23 import org
.hibernate
.Session
;
24 import org
.hibernate
.criterion
.Criterion
;
25 import org
.hibernate
.envers
.query
.criteria
.AuditCriterion
;
27 import eu
.etaxonomy
.cdm
.api
.service
.ITaxonService
;
28 import eu
.etaxonomy
.cdm
.api
.service
.TaxaAndNamesSearchMode
;
29 import eu
.etaxonomy
.cdm
.api
.service
.config
.IFindTaxaAndNamesConfigurator
;
30 import eu
.etaxonomy
.cdm
.api
.service
.config
.IIdentifiableEntityServiceConfigurator
;
31 import eu
.etaxonomy
.cdm
.api
.service
.config
.MatchingTaxonConfigurator
;
32 import eu
.etaxonomy
.cdm
.api
.service
.config
.TaxonDeletionConfigurator
;
33 import eu
.etaxonomy
.cdm
.api
.service
.exception
.HomotypicalGroupChangeException
;
34 import eu
.etaxonomy
.cdm
.api
.service
.exception
.ReferencedObjectUndeletableException
;
35 import eu
.etaxonomy
.cdm
.api
.service
.pager
.Pager
;
36 import eu
.etaxonomy
.cdm
.api
.service
.search
.LuceneMultiSearchException
;
37 import eu
.etaxonomy
.cdm
.api
.service
.search
.SearchResult
;
38 import eu
.etaxonomy
.cdm
.api
.service
.util
.TaxonRelationshipEdge
;
39 import eu
.etaxonomy
.cdm
.common
.monitor
.IProgressMonitor
;
40 import eu
.etaxonomy
.cdm
.model
.common
.Annotation
;
41 import eu
.etaxonomy
.cdm
.model
.common
.ISourceable
;
42 import eu
.etaxonomy
.cdm
.model
.common
.IdentifiableEntity
;
43 import eu
.etaxonomy
.cdm
.model
.common
.IdentifiableSource
;
44 import eu
.etaxonomy
.cdm
.model
.common
.LSID
;
45 import eu
.etaxonomy
.cdm
.model
.common
.Language
;
46 import eu
.etaxonomy
.cdm
.model
.common
.Marker
;
47 import eu
.etaxonomy
.cdm
.model
.common
.MarkerType
;
48 import eu
.etaxonomy
.cdm
.model
.common
.OrderedTermVocabulary
;
49 import eu
.etaxonomy
.cdm
.model
.common
.RelationshipBase
;
50 import eu
.etaxonomy
.cdm
.model
.common
.RelationshipBase
.Direction
;
51 import eu
.etaxonomy
.cdm
.model
.common
.UuidAndTitleCache
;
52 import eu
.etaxonomy
.cdm
.model
.description
.DescriptionElementBase
;
53 import eu
.etaxonomy
.cdm
.model
.description
.Feature
;
54 import eu
.etaxonomy
.cdm
.model
.description
.PresenceAbsenceTermBase
;
55 import eu
.etaxonomy
.cdm
.model
.location
.NamedArea
;
56 import eu
.etaxonomy
.cdm
.model
.media
.Media
;
57 import eu
.etaxonomy
.cdm
.model
.media
.MediaRepresentation
;
58 import eu
.etaxonomy
.cdm
.model
.media
.Rights
;
59 import eu
.etaxonomy
.cdm
.model
.name
.HomotypicalGroup
;
60 import eu
.etaxonomy
.cdm
.model
.name
.Rank
;
61 import eu
.etaxonomy
.cdm
.model
.name
.TaxonNameBase
;
62 import eu
.etaxonomy
.cdm
.model
.reference
.Reference
;
63 import eu
.etaxonomy
.cdm
.model
.taxon
.Classification
;
64 import eu
.etaxonomy
.cdm
.model
.taxon
.Synonym
;
65 import eu
.etaxonomy
.cdm
.model
.taxon
.SynonymRelationship
;
66 import eu
.etaxonomy
.cdm
.model
.taxon
.SynonymRelationshipType
;
67 import eu
.etaxonomy
.cdm
.model
.taxon
.Taxon
;
68 import eu
.etaxonomy
.cdm
.model
.taxon
.TaxonBase
;
69 import eu
.etaxonomy
.cdm
.model
.taxon
.TaxonRelationship
;
70 import eu
.etaxonomy
.cdm
.model
.taxon
.TaxonRelationshipType
;
71 import eu
.etaxonomy
.cdm
.model
.view
.AuditEvent
;
72 import eu
.etaxonomy
.cdm
.model
.view
.AuditEventRecord
;
73 import eu
.etaxonomy
.cdm
.persistence
.dao
.common
.AuditEventSort
;
74 import eu
.etaxonomy
.cdm
.persistence
.fetch
.CdmFetch
;
75 import eu
.etaxonomy
.cdm
.persistence
.query
.Grouping
;
76 import eu
.etaxonomy
.cdm
.persistence
.query
.MatchMode
;
77 import eu
.etaxonomy
.cdm
.persistence
.query
.OrderHint
;
78 import eu
.etaxonomy
.cdm
.strategy
.cache
.common
.IIdentifiableEntityCacheStrategy
;
79 import eu
.etaxonomy
.cdm
.strategy
.match
.IMatchStrategy
;
80 import eu
.etaxonomy
.cdm
.strategy
.merge
.IMergeStrategy
;
87 public class TransientTaxonService
implements ITaxonService
{
89 private ITaxonService defaultTaxonService
;
92 * @param defaultTaxonService
94 public TransientTaxonService(ITaxonService defaultTaxonService
) {
95 this.defaultTaxonService
= defaultTaxonService
;
103 * @param propertyPaths
105 * @see eu.etaxonomy.cdm.api.service.IVersionableService#pageAuditEvents(eu.etaxonomy.cdm.model.common.VersionableEntity, java.lang.Integer, java.lang.Integer, eu.etaxonomy.cdm.persistence.dao.common.AuditEventSort, java.util.List)
108 public Pager
<AuditEventRecord
<TaxonBase
>> pageAuditEvents(TaxonBase t
, Integer pageSize
, Integer pageNumber
, AuditEventSort sort
, List
<String
> propertyPaths
) {
109 return defaultTaxonService
.pageAuditEvents(t
, pageSize
, pageNumber
, sort
, propertyPaths
);
113 * @param annotatedObj
118 * @param propertyPaths
120 * @see eu.etaxonomy.cdm.api.service.IAnnotatableService#getAnnotations(eu.etaxonomy.cdm.model.common.AnnotatableEntity, eu.etaxonomy.cdm.model.common.MarkerType, java.lang.Integer, java.lang.Integer, java.util.List, java.util.List)
123 public Pager
<Annotation
> getAnnotations(TaxonBase annotatedObj
, MarkerType status
, Integer pageSize
, Integer pageNumber
, List
<OrderHint
> orderHints
, List
<String
> propertyPaths
) {
124 return defaultTaxonService
.getAnnotations(annotatedObj
, status
, pageSize
, pageNumber
, orderHints
, propertyPaths
);
129 * @see eu.etaxonomy.cdm.api.service.IService#clear()
132 public void clear() {
133 defaultTaxonService
.clear();
139 * @see eu.etaxonomy.cdm.api.service.IService#lock(eu.etaxonomy.cdm.model.common.ICdmBase, org.hibernate.LockMode)
142 public void lock(TaxonBase t
, LockMode lockMode
) {
143 defaultTaxonService
.lock(t
, lockMode
);
149 * @param propertyPaths
150 * @see eu.etaxonomy.cdm.api.service.IService#refresh(eu.etaxonomy.cdm.model.common.ICdmBase, org.hibernate.LockMode, java.util.List)
153 public void refresh(TaxonBase t
, LockMode lockMode
, List
<String
> propertyPaths
) {
154 defaultTaxonService
.refresh(t
, lockMode
, propertyPaths
);
159 * @see eu.etaxonomy.cdm.api.service.IIdentifiableEntityService#updateTitleCache()
162 public void updateTitleCache() {
163 defaultTaxonService
.updateTitleCache();
169 * @see eu.etaxonomy.cdm.api.service.IVersionableService#getNextAuditEvent(eu.etaxonomy.cdm.model.common.VersionableEntity)
172 public AuditEventRecord
<TaxonBase
> getNextAuditEvent(TaxonBase t
) {
173 return defaultTaxonService
.getNextAuditEvent(t
);
177 * @param annotatableEntity
182 * @param propertyPaths
184 * @see eu.etaxonomy.cdm.api.service.IAnnotatableService#getMarkers(eu.etaxonomy.cdm.model.common.AnnotatableEntity, java.lang.Boolean, java.lang.Integer, java.lang.Integer, java.util.List, java.util.List)
187 public Pager
<Marker
> getMarkers(TaxonBase annotatableEntity
, Boolean technical
, Integer pageSize
, Integer pageNumber
, List
<OrderHint
> orderHints
, List
<String
> propertyPaths
) {
188 return defaultTaxonService
.getMarkers(annotatableEntity
, technical
, pageSize
, pageNumber
, orderHints
, propertyPaths
);
194 * @param cacheStrategy
196 * @see eu.etaxonomy.cdm.api.service.IIdentifiableEntityService#updateTitleCache(java.lang.Class, java.lang.Integer, eu.etaxonomy.cdm.strategy.cache.common.IIdentifiableEntityCacheStrategy, eu.etaxonomy.cdm.common.monitor.IProgressMonitor)
199 public void updateTitleCache(Class
<?
extends TaxonBase
> clazz
, Integer stepSize
, IIdentifiableEntityCacheStrategy
<TaxonBase
> cacheStrategy
, IProgressMonitor monitor
) {
200 defaultTaxonService
.updateTitleCache(clazz
, stepSize
, cacheStrategy
, monitor
);
206 * @see eu.etaxonomy.cdm.api.service.IVersionableService#getPreviousAuditEvent(eu.etaxonomy.cdm.model.common.VersionableEntity)
209 public AuditEventRecord
<TaxonBase
> getPreviousAuditEvent(TaxonBase t
) {
210 return defaultTaxonService
.getPreviousAuditEvent(t
);
216 * @see eu.etaxonomy.cdm.api.service.IService#count(java.lang.Class)
219 public int count(Class
<?
extends TaxonBase
> clazz
) {
220 return defaultTaxonService
.count(clazz
);
231 * @param propertyPaths
233 * @see eu.etaxonomy.cdm.api.service.IVersionableService#pageAuditEvents(java.lang.Class, eu.etaxonomy.cdm.model.view.AuditEvent, eu.etaxonomy.cdm.model.view.AuditEvent, java.util.List, java.lang.Integer, java.lang.Integer, eu.etaxonomy.cdm.persistence.dao.common.AuditEventSort, java.util.List)
236 public Pager
<AuditEventRecord
<TaxonBase
>> pageAuditEvents(Class
<?
extends TaxonBase
> clazz
, AuditEvent from
, AuditEvent to
, List
<AuditCriterion
> criteria
, Integer pageSize
, Integer pageValue
, AuditEventSort sort
, List
<String
> propertyPaths
) {
237 return defaultTaxonService
.pageAuditEvents(clazz
, from
, to
, criteria
, pageSize
, pageValue
, sort
, propertyPaths
);
243 * @see eu.etaxonomy.cdm.api.service.IIdentifiableEntityService#find(eu.etaxonomy.cdm.model.common.LSID)
246 public TaxonBase
find(LSID lsid
) {
247 return defaultTaxonService
.find(lsid
);
251 * @param persistentObject
253 * @see eu.etaxonomy.cdm.api.service.IService#delete(eu.etaxonomy.cdm.model.common.ICdmBase)
256 public UUID
delete(TaxonBase persistentObject
) {
257 return defaultTaxonService
.delete(persistentObject
);
265 * @param propertyPaths
267 * @see eu.etaxonomy.cdm.api.service.IAnnotatableService#groupMarkers(java.lang.Class, java.lang.Boolean, java.lang.Integer, java.lang.Integer, java.util.List)
270 public List
<Object
[]> groupMarkers(Class
<?
extends TaxonBase
> clazz
, Boolean technical
, Integer pageSize
, Integer pageNumber
, List
<String
> propertyPaths
) {
271 return defaultTaxonService
.groupMarkers(clazz
, technical
, pageSize
, pageNumber
, propertyPaths
);
277 * @see eu.etaxonomy.cdm.api.service.IService#exists(java.util.UUID)
280 public boolean exists(UUID uuid
) {
281 return defaultTaxonService
.exists(uuid
);
288 * @see eu.etaxonomy.cdm.api.service.ITaxonService#getAllSynonyms(int, int)
291 public List
<Synonym
> getAllSynonyms(int limit
, int start
) {
292 return defaultTaxonService
.getAllSynonyms(limit
, start
);
299 * @see eu.etaxonomy.cdm.api.service.IIdentifiableEntityService#replace(eu.etaxonomy.cdm.model.common.IdentifiableEntity, eu.etaxonomy.cdm.model.common.IdentifiableEntity)
302 public TaxonBase
replace(TaxonBase x
, TaxonBase y
) {
303 return defaultTaxonService
.replace(x
, y
);
310 * @see eu.etaxonomy.cdm.api.service.ITaxonService#getAllTaxa(int, int)
313 public List
<Taxon
> getAllTaxa(int limit
, int start
) {
314 return defaultTaxonService
.getAllTaxa(limit
, start
);
320 * @see eu.etaxonomy.cdm.api.service.IService#find(java.util.Set)
323 public List
<TaxonBase
> find(Set
<UUID
> uuidSet
) {
324 return defaultTaxonService
.find(uuidSet
);
331 * @param propertyPaths
333 * @see eu.etaxonomy.cdm.api.service.IIdentifiableEntityService#getSources(eu.etaxonomy.cdm.model.common.IdentifiableEntity, java.lang.Integer, java.lang.Integer, java.util.List)
336 public Pager
<IdentifiableSource
> getSources(TaxonBase t
, Integer pageSize
, Integer pageNumber
, List
<String
> propertyPaths
) {
337 return defaultTaxonService
.getSources(t
, pageSize
, pageNumber
, propertyPaths
);
343 * @param onlyWithChildren
346 * @see eu.etaxonomy.cdm.api.service.ITaxonService#getRootTaxa(eu.etaxonomy.cdm.model.reference.Reference, eu.etaxonomy.cdm.persistence.fetch.CdmFetch, boolean)
350 public List
<Taxon
> getRootTaxa(Reference sec
, CdmFetch cdmFetch
, boolean onlyWithChildren
) {
351 return defaultTaxonService
.getRootTaxa(sec
, cdmFetch
, onlyWithChildren
);
357 * @see eu.etaxonomy.cdm.api.service.IService#find(java.util.UUID)
360 public TaxonBase
find(UUID uuid
) {
361 return defaultTaxonService
.find(uuid
);
367 * @param onlyWithChildren
368 * @param withMisapplications
369 * @param propertyPaths
372 * @see eu.etaxonomy.cdm.api.service.ITaxonService#getRootTaxa(eu.etaxonomy.cdm.model.name.Rank, eu.etaxonomy.cdm.model.reference.Reference, boolean, boolean, java.util.List)
376 public List
<Taxon
> getRootTaxa(Rank rank
, Reference sec
, boolean onlyWithChildren
, boolean withMisapplications
, List
<String
> propertyPaths
) {
377 return defaultTaxonService
.getRootTaxa(rank
, sec
, onlyWithChildren
, withMisapplications
, propertyPaths
);
383 * @see eu.etaxonomy.cdm.api.service.IService#find(int)
386 public TaxonBase
find(int id
) {
387 return defaultTaxonService
.find(id
);
394 * @param propertyPaths
396 * @see eu.etaxonomy.cdm.api.service.IIdentifiableEntityService#getRights(eu.etaxonomy.cdm.model.common.IdentifiableEntity, java.lang.Integer, java.lang.Integer, java.util.List)
399 public Pager
<Rights
> getRights(TaxonBase t
, Integer pageSize
, Integer pageNumber
, List
<String
> propertyPaths
) {
400 return defaultTaxonService
.getRights(t
, pageSize
, pageNumber
, propertyPaths
);
407 * @see eu.etaxonomy.cdm.api.service.IAnnotatableService#countMarkers(java.lang.Class, java.lang.Boolean)
410 public int countMarkers(Class
<?
extends TaxonBase
> clazz
, Boolean technical
) {
411 return defaultTaxonService
.countMarkers(clazz
, technical
);
417 * @see eu.etaxonomy.cdm.api.service.IService#findById(java.util.Set)
420 public List
<TaxonBase
> findById(Set
<Integer
> idSet
) {
421 return defaultTaxonService
.findById(idSet
);
429 * @see eu.etaxonomy.cdm.api.service.IIdentifiableEntityService#getSourcedObjectByIdInSource(java.lang.Class, java.lang.String, java.lang.String)
432 public ISourceable
getSourcedObjectByIdInSource(Class clazz
, String idInSource
, String idNamespace
) {
433 return defaultTaxonService
.getSourcedObjectByIdInSource(clazz
, idInSource
, idNamespace
);
438 * @see eu.etaxonomy.cdm.api.service.IService#getSession()
441 public Session
getSession() {
442 return defaultTaxonService
.getSession();
447 * @see eu.etaxonomy.cdm.api.service.IIdentifiableEntityService#getUuidAndTitleCache()
450 public List
<UuidAndTitleCache
<TaxonBase
>> getUuidAndTitleCache() {
451 return defaultTaxonService
.getUuidAndTitleCache();
459 * @param propertyPaths
461 * @see eu.etaxonomy.cdm.api.service.IService#group(java.lang.Class, java.lang.Integer, java.lang.Integer, java.util.List, java.util.List)
464 public List
<Object
[]> group(Class
<?
extends TaxonBase
> clazz
, Integer limit
, Integer start
, List
<Grouping
> groups
, List
<String
> propertyPaths
) {
465 return defaultTaxonService
.group(clazz
, limit
, start
, groups
, propertyPaths
);
472 * @see eu.etaxonomy.cdm.api.service.ITaxonService#getAllRelationships(int, int)
475 public List
<RelationshipBase
> getAllRelationships(int limit
, int start
) {
476 return defaultTaxonService
.getAllRelationships(limit
, start
);
487 * @param propertyPaths
489 * @see eu.etaxonomy.cdm.api.service.IIdentifiableEntityService#findByTitle(java.lang.Class, java.lang.String, eu.etaxonomy.cdm.persistence.query.MatchMode, java.util.List, java.lang.Integer, java.lang.Integer, java.util.List, java.util.List)
492 public Pager
<TaxonBase
> findByTitle(Class
<?
extends TaxonBase
> clazz
, String queryString
, MatchMode matchmode
, List
<Criterion
> criteria
, Integer pageSize
, Integer pageNumber
, List
<OrderHint
> orderHints
, List
<String
> propertyPaths
) {
493 return defaultTaxonService
.findByTitle(clazz
, queryString
, matchmode
, criteria
, pageSize
, pageNumber
, orderHints
, propertyPaths
);
499 * @see eu.etaxonomy.cdm.api.service.ITaxonService#getTaxonRelationshipTypeVocabulary()
503 public OrderedTermVocabulary
<TaxonRelationshipType
> getTaxonRelationshipTypeVocabulary() {
504 return defaultTaxonService
.getTaxonRelationshipTypeVocabulary();
511 * @see eu.etaxonomy.cdm.api.service.ITaxonService#searchTaxaByName(java.lang.String, eu.etaxonomy.cdm.model.reference.Reference)
514 public List
<TaxonBase
> searchTaxaByName(String name
, Reference sec
) {
515 return defaultTaxonService
.searchTaxaByName(name
, sec
);
520 * @param acceptedTaxon
521 * @see eu.etaxonomy.cdm.api.service.ITaxonService#swapSynonymAndAcceptedTaxon(eu.etaxonomy.cdm.model.taxon.Synonym, eu.etaxonomy.cdm.model.taxon.Taxon)
524 public void swapSynonymAndAcceptedTaxon(Synonym synonym
, Taxon acceptedTaxon
) {
525 defaultTaxonService
.swapSynonymAndAcceptedTaxon(synonym
, acceptedTaxon
);
533 * @param propertyPaths
535 * @see eu.etaxonomy.cdm.api.service.IService#list(java.lang.Class, java.lang.Integer, java.lang.Integer, java.util.List, java.util.List)
538 public List
<TaxonBase
> list(Class
<?
extends TaxonBase
> type
, Integer limit
, Integer start
, List
<OrderHint
> orderHints
, List
<String
> propertyPaths
) {
539 return defaultTaxonService
.list(type
, limit
, start
, orderHints
, propertyPaths
);
543 * @param configurator
545 * @see eu.etaxonomy.cdm.api.service.IIdentifiableEntityService#findByTitle(eu.etaxonomy.cdm.api.service.config.IIdentifiableEntityServiceConfigurator)
548 public Pager
<TaxonBase
> findByTitle(IIdentifiableEntityServiceConfigurator
<TaxonBase
> configurator
) {
549 return defaultTaxonService
.findByTitle(configurator
);
554 * @param acceptedTaxon
555 * @param deleteSynonym
556 * @param copyCitationInfo
558 * @param microCitation
560 * @throws HomotypicalGroupChangeException
561 * @see eu.etaxonomy.cdm.api.service.ITaxonService#changeSynonymToAcceptedTaxon(eu.etaxonomy.cdm.model.taxon.Synonym, eu.etaxonomy.cdm.model.taxon.Taxon, boolean, boolean, eu.etaxonomy.cdm.model.reference.Reference, java.lang.String)
564 public Taxon
changeSynonymToAcceptedTaxon(Synonym synonym
, Taxon acceptedTaxon
, boolean deleteSynonym
, boolean copyCitationInfo
, Reference citation
, String microCitation
) throws HomotypicalGroupChangeException
{
565 return defaultTaxonService
.changeSynonymToAcceptedTaxon(synonym
, acceptedTaxon
, deleteSynonym
, copyCitationInfo
, citation
, microCitation
);
574 * @see eu.etaxonomy.cdm.api.service.IIdentifiableEntityService#countByTitle(java.lang.Class, java.lang.String, eu.etaxonomy.cdm.persistence.query.MatchMode, java.util.List)
577 public Integer
countByTitle(Class
<?
extends TaxonBase
> clazz
, String queryString
, MatchMode matchmode
, List
<Criterion
> criteria
) {
578 return defaultTaxonService
.countByTitle(clazz
, queryString
, matchmode
, criteria
);
584 * @see eu.etaxonomy.cdm.api.service.IService#load(java.util.UUID)
587 public TaxonBase
load(UUID uuid
) {
588 return defaultTaxonService
.load(uuid
);
593 * @param propertyPaths
595 * @see eu.etaxonomy.cdm.api.service.IService#load(java.util.UUID, java.util.List)
598 public TaxonBase
load(UUID uuid
, List
<String
> propertyPaths
) {
599 return defaultTaxonService
.load(uuid
, propertyPaths
);
603 * @param configurator
605 * @see eu.etaxonomy.cdm.api.service.IIdentifiableEntityService#countByTitle(eu.etaxonomy.cdm.api.service.config.IIdentifiableEntityServiceConfigurator)
608 public Integer
countByTitle(IIdentifiableEntityServiceConfigurator
<TaxonBase
> configurator
) {
609 return defaultTaxonService
.countByTitle(configurator
);
613 * @param transientObject
615 * @see eu.etaxonomy.cdm.api.service.IService#merge(eu.etaxonomy.cdm.model.common.ICdmBase)
618 public TaxonBase
merge(TaxonBase transientObject
) {
619 return defaultTaxonService
.merge(transientObject
);
630 * @param propertyPaths
632 * @see eu.etaxonomy.cdm.api.service.IIdentifiableEntityService#listByTitle(java.lang.Class, java.lang.String, eu.etaxonomy.cdm.persistence.query.MatchMode, java.util.List, java.lang.Integer, java.lang.Integer, java.util.List, java.util.List)
635 public List
<TaxonBase
> listByTitle(Class
<?
extends TaxonBase
> clazz
, String queryString
, MatchMode matchmode
, List
<Criterion
> criteria
, Integer pageSize
, Integer pageNumber
, List
<OrderHint
> orderHints
, List
<String
> propertyPaths
) {
636 return defaultTaxonService
.listByTitle(clazz
, queryString
, matchmode
, criteria
, pageSize
, pageNumber
, orderHints
, propertyPaths
);
644 * @param propertyPaths
646 * @see eu.etaxonomy.cdm.api.service.IService#page(java.lang.Class, java.lang.Integer, java.lang.Integer, java.util.List, java.util.List)
649 public Pager
<TaxonBase
> page(Class
<?
extends TaxonBase
> type
, Integer pageSize
, Integer pageNumber
, List
<OrderHint
> orderHints
, List
<String
> propertyPaths
) {
650 return defaultTaxonService
.page(type
, pageSize
, pageNumber
, orderHints
, propertyPaths
);
654 * @param persistentObject
656 * @see eu.etaxonomy.cdm.api.service.IService#refresh(eu.etaxonomy.cdm.model.common.ICdmBase)
659 public UUID
refresh(TaxonBase persistentObject
) {
660 return defaultTaxonService
.refresh(persistentObject
);
666 * @param taxonRelationshipType
668 * @param microReference
670 * @see eu.etaxonomy.cdm.api.service.ITaxonService#changeSynonymToRelatedTaxon(eu.etaxonomy.cdm.model.taxon.Synonym, eu.etaxonomy.cdm.model.taxon.Taxon, eu.etaxonomy.cdm.model.taxon.TaxonRelationshipType, eu.etaxonomy.cdm.model.reference.Reference, java.lang.String)
673 public Taxon
changeSynonymToRelatedTaxon(Synonym synonym
, Taxon toTaxon
, TaxonRelationshipType taxonRelationshipType
, Reference reference
, String microReference
) {
674 return defaultTaxonService
.changeSynonymToRelatedTaxon(synonym
, toTaxon
, taxonRelationshipType
, reference
, microReference
);
685 * @param propertyPaths
687 * @see eu.etaxonomy.cdm.api.service.IIdentifiableEntityService#listByReferenceTitle(java.lang.Class, java.lang.String, eu.etaxonomy.cdm.persistence.query.MatchMode, java.util.List, java.lang.Integer, java.lang.Integer, java.util.List, java.util.List)
690 public List
<TaxonBase
> listByReferenceTitle(Class
<?
extends TaxonBase
> clazz
, String queryString
, MatchMode matchmode
, List
<Criterion
> criteria
, Integer pageSize
, Integer pageNumber
, List
<OrderHint
> orderHints
, List
<String
> propertyPaths
) {
691 return defaultTaxonService
.listByReferenceTitle(clazz
, queryString
, matchmode
, criteria
, pageSize
, pageNumber
, orderHints
, propertyPaths
);
699 * @see eu.etaxonomy.cdm.api.service.IService#rows(java.lang.String, int, int)
702 public List
<TaxonBase
> rows(String tableName
, int limit
, int start
) {
703 return defaultTaxonService
.rows(tableName
, limit
, start
);
707 * @param newInstances
709 * @see eu.etaxonomy.cdm.api.service.IService#save(java.util.Collection)
712 public Map
<UUID
, TaxonBase
> save(Collection
<TaxonBase
> newInstances
) {
720 * @see eu.etaxonomy.cdm.api.service.ITaxonService#deleteSynonymRelationships(eu.etaxonomy.cdm.model.taxon.Synonym, eu.etaxonomy.cdm.model.taxon.Taxon)
723 public long deleteSynonymRelationships(Synonym syn
, Taxon taxon
) {
724 return defaultTaxonService
.deleteSynonymRelationships(syn
, taxon
);
730 * @see eu.etaxonomy.cdm.api.service.IService#save(eu.etaxonomy.cdm.model.common.ICdmBase)
733 public UUID
save(TaxonBase newInstance
) {
740 * @throws ReferencedObjectUndeletableException
741 * @see eu.etaxonomy.cdm.api.service.ITaxonService#deleteTaxon(eu.etaxonomy.cdm.model.taxon.Taxon, eu.etaxonomy.cdm.api.service.config.TaxonDeletionConfigurator)
744 public void deleteTaxon(Taxon taxon
, TaxonDeletionConfigurator config
) throws ReferencedObjectUndeletableException
{
745 defaultTaxonService
.deleteTaxon(taxon
, config
);
749 * @param transientObject
751 * @see eu.etaxonomy.cdm.api.service.IService#saveOrUpdate(eu.etaxonomy.cdm.model.common.ICdmBase)
754 public UUID
saveOrUpdate(TaxonBase transientObject
) {
760 * @param newHomotypicalGroup
762 * @param removeFromOtherTaxa
763 * @param setBasionymRelationIfApplicable
764 * @see eu.etaxonomy.cdm.api.service.ITaxonService#changeHomotypicalGroupOfSynonym(eu.etaxonomy.cdm.model.taxon.Synonym, eu.etaxonomy.cdm.model.name.HomotypicalGroup, eu.etaxonomy.cdm.model.taxon.Taxon, boolean, boolean)
767 public void changeHomotypicalGroupOfSynonym(Synonym synonym
, HomotypicalGroup newHomotypicalGroup
, Taxon targetTaxon
, boolean removeFromOtherTaxa
, boolean setBasionymRelationIfApplicable
) {
768 defaultTaxonService
.changeHomotypicalGroupOfSynonym(synonym
, newHomotypicalGroup
, targetTaxon
, removeFromOtherTaxa
, setBasionymRelationIfApplicable
);
772 * @param transientObjects
774 * @see eu.etaxonomy.cdm.api.service.IService#saveOrUpdate(java.util.Collection)
777 public Map
<UUID
, TaxonBase
> saveOrUpdate(Collection
<TaxonBase
> transientObjects
) {
782 * @param transientObject
784 * @see eu.etaxonomy.cdm.api.service.IService#update(eu.etaxonomy.cdm.model.common.ICdmBase)
787 public UUID
update(TaxonBase transientObject
) {
788 return defaultTaxonService
.update(transientObject
);
793 * @param includeProperties
797 * @param propertyPaths
799 * @see eu.etaxonomy.cdm.api.service.IService#list(eu.etaxonomy.cdm.model.common.ICdmBase, java.util.Set, java.lang.Integer, java.lang.Integer, java.util.List, java.util.List)
802 public List
<TaxonBase
> list(TaxonBase example
, Set
<String
> includeProperties
, Integer limit
, Integer start
, List
<OrderHint
> orderHints
, List
<String
> propertyPaths
) {
803 return defaultTaxonService
.list(example
, includeProperties
, limit
, start
, orderHints
, propertyPaths
);
807 * @param oldSynonymRelation
809 * @param moveHomotypicGroup
810 * @param newSynonymRelationshipType
811 * @param newReference
812 * @param newReferenceDetail
813 * @param keepReference
815 * @throws HomotypicalGroupChangeException
816 * @see eu.etaxonomy.cdm.api.service.ITaxonService#moveSynonymToAnotherTaxon(eu.etaxonomy.cdm.model.taxon.SynonymRelationship, eu.etaxonomy.cdm.model.taxon.Taxon, boolean, eu.etaxonomy.cdm.model.taxon.SynonymRelationshipType, eu.etaxonomy.cdm.model.reference.Reference, java.lang.String, boolean)
819 public SynonymRelationship
moveSynonymToAnotherTaxon(SynonymRelationship oldSynonymRelation
, Taxon newTaxon
, boolean moveHomotypicGroup
, SynonymRelationshipType newSynonymRelationshipType
, Reference newReference
, String newReferenceDetail
, boolean keepReference
) throws HomotypicalGroupChangeException
{
820 return defaultTaxonService
.moveSynonymToAnotherTaxon(oldSynonymRelation
, newTaxon
, moveHomotypicGroup
, newSynonymRelationshipType
, newReference
, newReferenceDetail
, keepReference
);
825 * @param matchStrategy
826 * @param mergeStrategy
828 * @see eu.etaxonomy.cdm.api.service.IIdentifiableEntityService#deduplicate(java.lang.Class, eu.etaxonomy.cdm.strategy.match.IMatchStrategy, eu.etaxonomy.cdm.strategy.merge.IMergeStrategy)
831 public int deduplicate(Class
<?
extends TaxonBase
> clazz
, IMatchStrategy matchStrategy
, IMergeStrategy mergeStrategy
) {
832 return defaultTaxonService
.deduplicate(clazz
, matchStrategy
, mergeStrategy
);
843 * @see eu.etaxonomy.cdm.api.service.IIdentifiableEntityService#findTitleCache(java.lang.Class, java.lang.String, java.lang.Integer, java.lang.Integer, java.util.List, eu.etaxonomy.cdm.persistence.query.MatchMode)
846 public Pager
<TaxonBase
> findTitleCache(Class
<?
extends TaxonBase
> clazz
, String queryString
, Integer pageSize
, Integer pageNumber
, List
<OrderHint
> orderHints
, MatchMode matchMode
) {
847 return defaultTaxonService
.findTitleCache(clazz
, queryString
, pageSize
, pageNumber
, orderHints
, matchMode
);
856 * @param propertyPaths
858 * @see eu.etaxonomy.cdm.api.service.ITaxonService#listToTaxonRelationships(eu.etaxonomy.cdm.model.taxon.Taxon, eu.etaxonomy.cdm.model.taxon.TaxonRelationshipType, java.lang.Integer, java.lang.Integer, java.util.List, java.util.List)
861 public List
<TaxonRelationship
> listToTaxonRelationships(Taxon taxon
, TaxonRelationshipType type
, Integer pageSize
, Integer pageNumber
, List
<OrderHint
> orderHints
, List
<String
> propertyPaths
) {
862 return defaultTaxonService
.listToTaxonRelationships(taxon
, type
, pageSize
, pageNumber
, orderHints
, propertyPaths
);
871 * @param propertyPaths
873 * @see eu.etaxonomy.cdm.api.service.ITaxonService#pageToTaxonRelationships(eu.etaxonomy.cdm.model.taxon.Taxon, eu.etaxonomy.cdm.model.taxon.TaxonRelationshipType, java.lang.Integer, java.lang.Integer, java.util.List, java.util.List)
876 public Pager
<TaxonRelationship
> pageToTaxonRelationships(Taxon taxon
, TaxonRelationshipType type
, Integer pageSize
, Integer pageNumber
, List
<OrderHint
> orderHints
, List
<String
> propertyPaths
) {
877 return defaultTaxonService
.pageToTaxonRelationships(taxon
, type
, pageSize
, pageNumber
, orderHints
, propertyPaths
);
886 * @param propertyPaths
888 * @see eu.etaxonomy.cdm.api.service.ITaxonService#listFromTaxonRelationships(eu.etaxonomy.cdm.model.taxon.Taxon, eu.etaxonomy.cdm.model.taxon.TaxonRelationshipType, java.lang.Integer, java.lang.Integer, java.util.List, java.util.List)
891 public List
<TaxonRelationship
> listFromTaxonRelationships(Taxon taxon
, TaxonRelationshipType type
, Integer pageSize
, Integer pageNumber
, List
<OrderHint
> orderHints
, List
<String
> propertyPaths
) {
892 return defaultTaxonService
.listFromTaxonRelationships(taxon
, type
, pageSize
, pageNumber
, orderHints
, propertyPaths
);
901 * @param propertyPaths
903 * @see eu.etaxonomy.cdm.api.service.ITaxonService#pageFromTaxonRelationships(eu.etaxonomy.cdm.model.taxon.Taxon, eu.etaxonomy.cdm.model.taxon.TaxonRelationshipType, java.lang.Integer, java.lang.Integer, java.util.List, java.util.List)
906 public Pager
<TaxonRelationship
> pageFromTaxonRelationships(Taxon taxon
, TaxonRelationshipType type
, Integer pageSize
, Integer pageNumber
, List
<OrderHint
> orderHints
, List
<String
> propertyPaths
) {
907 return defaultTaxonService
.pageFromTaxonRelationships(taxon
, type
, pageSize
, pageNumber
, orderHints
, propertyPaths
);
912 * @param includeRelationships
916 * @param propertyPaths
918 * @see eu.etaxonomy.cdm.api.service.ITaxonService#listRelatedTaxa(eu.etaxonomy.cdm.model.taxon.Taxon, java.util.Set, java.lang.Integer, java.lang.Integer, java.lang.Integer, java.util.List)
921 public Set
<Taxon
> listRelatedTaxa(Taxon taxon
, Set
<TaxonRelationshipEdge
> includeRelationships
, Integer maxDepth
, Integer limit
, Integer start
, List
<String
> propertyPaths
) {
922 return defaultTaxonService
.listRelatedTaxa(taxon
, includeRelationships
, maxDepth
, limit
, start
, propertyPaths
);
929 * @param propertyPaths
931 * @see eu.etaxonomy.cdm.api.service.ITaxonService#listClassifications(eu.etaxonomy.cdm.model.taxon.TaxonBase, java.lang.Integer, java.lang.Integer, java.util.List)
934 public List
<Classification
> listClassifications(TaxonBase taxonBase
, Integer limit
, Integer start
, List
<String
> propertyPaths
) {
935 return defaultTaxonService
.listClassifications(taxonBase
, limit
, start
, propertyPaths
);
944 * @param propertyPaths
946 * @see eu.etaxonomy.cdm.api.service.ITaxonService#getSynonyms(eu.etaxonomy.cdm.model.taxon.Synonym, eu.etaxonomy.cdm.model.taxon.SynonymRelationshipType, java.lang.Integer, java.lang.Integer, java.util.List, java.util.List)
949 public Pager
<SynonymRelationship
> getSynonyms(Synonym synonym
, SynonymRelationshipType type
, Integer pageSize
, Integer pageNumber
, List
<OrderHint
> orderHints
, List
<String
> propertyPaths
) {
950 return defaultTaxonService
.getSynonyms(synonym
, type
, pageSize
, pageNumber
, orderHints
, propertyPaths
);
959 * @param propertyPaths
961 * @see eu.etaxonomy.cdm.api.service.ITaxonService#getSynonyms(eu.etaxonomy.cdm.model.taxon.Taxon, eu.etaxonomy.cdm.model.taxon.SynonymRelationshipType, java.lang.Integer, java.lang.Integer, java.util.List, java.util.List)
964 public Pager
<SynonymRelationship
> getSynonyms(Taxon taxon
, SynonymRelationshipType type
, Integer pageSize
, Integer pageNumber
, List
<OrderHint
> orderHints
, List
<String
> propertyPaths
) {
965 return defaultTaxonService
.getSynonyms(taxon
, type
, pageSize
, pageNumber
, orderHints
, propertyPaths
);
970 * @param propertyPaths
972 * @see eu.etaxonomy.cdm.api.service.ITaxonService#getHomotypicSynonymsByHomotypicGroup(eu.etaxonomy.cdm.model.taxon.Taxon, java.util.List)
975 public List
<Synonym
> getHomotypicSynonymsByHomotypicGroup(Taxon taxon
, List
<String
> propertyPaths
) {
976 return defaultTaxonService
.getHomotypicSynonymsByHomotypicGroup(taxon
, propertyPaths
);
981 * @param propertyPaths
983 * @see eu.etaxonomy.cdm.api.service.ITaxonService#getHeterotypicSynonymyGroups(eu.etaxonomy.cdm.model.taxon.Taxon, java.util.List)
986 public List
<List
<Synonym
>> getHeterotypicSynonymyGroups(Taxon taxon
, List
<String
> propertyPaths
) {
987 return defaultTaxonService
.getHeterotypicSynonymyGroups(taxon
, propertyPaths
);
996 * @param propertyPaths
998 * @see eu.etaxonomy.cdm.api.service.ITaxonService#search(java.lang.Class, java.lang.String, java.lang.Integer, java.lang.Integer, java.util.List, java.util.List)
1001 public Pager
<TaxonBase
> search(Class
<?
extends TaxonBase
> clazz
, String queryString
, Integer pageSize
, Integer pageNumber
, List
<OrderHint
> orderHints
, List
<String
> propertyPaths
) {
1002 return defaultTaxonService
.search(clazz
, queryString
, pageSize
, pageNumber
, orderHints
, propertyPaths
);
1008 * @param infragenericEpithet
1009 * @param specificEpithet
1010 * @param infraspecificEpithet
1015 * @see eu.etaxonomy.cdm.api.service.ITaxonService#findTaxaByName(java.lang.Class, java.lang.String, java.lang.String, java.lang.String, java.lang.String, eu.etaxonomy.cdm.model.name.Rank, java.lang.Integer, java.lang.Integer)
1018 public Pager
<TaxonBase
> findTaxaByName(Class
<?
extends TaxonBase
> clazz
, String uninomial
, String infragenericEpithet
, String specificEpithet
, String infraspecificEpithet
, Rank rank
, Integer pageSize
, Integer pageNumber
) {
1019 return defaultTaxonService
.findTaxaByName(clazz
, uninomial
, infragenericEpithet
, specificEpithet
, infraspecificEpithet
, rank
, pageSize
, pageNumber
);
1025 * @param infragenericEpithet
1026 * @param specificEpithet
1027 * @param infraspecificEpithet
1032 * @see eu.etaxonomy.cdm.api.service.ITaxonService#listTaxaByName(java.lang.Class, java.lang.String, java.lang.String, java.lang.String, java.lang.String, eu.etaxonomy.cdm.model.name.Rank, java.lang.Integer, java.lang.Integer)
1035 public List
<TaxonBase
> listTaxaByName(Class
<?
extends TaxonBase
> clazz
, String uninomial
, String infragenericEpithet
, String specificEpithet
, String infraspecificEpithet
, Rank rank
, Integer pageSize
, Integer pageNumber
) {
1036 return defaultTaxonService
.listTaxaByName(clazz
, uninomial
, infragenericEpithet
, specificEpithet
, infraspecificEpithet
, rank
, pageSize
, pageNumber
);
1040 * @param configurator
1042 * @see eu.etaxonomy.cdm.api.service.ITaxonService#findTaxaAndNames(eu.etaxonomy.cdm.api.service.config.IFindTaxaAndNamesConfigurator)
1045 public Pager
<IdentifiableEntity
> findTaxaAndNames(IFindTaxaAndNamesConfigurator configurator
) {
1046 return defaultTaxonService
.findTaxaAndNames(configurator
);
1050 * @param queryString
1051 * @param classification
1053 * @param highlightFragments
1057 * @param propertyPaths
1059 * @throws CorruptIndexException
1060 * @throws IOException
1061 * @throws ParseException
1062 * @throws LuceneMultiSearchException
1064 * @see eu.etaxonomy.cdm.api.service.ITaxonService#findByEverythingFullText(java.lang.String, eu.etaxonomy.cdm.model.taxon.Classification, java.util.List, boolean, java.lang.Integer, java.lang.Integer, java.util.List, java.util.List)
1068 public Pager
<SearchResult
<TaxonBase
>> findByEverythingFullText(String queryString
, Classification classification
, List
<Language
> languages
, boolean highlightFragments
, Integer pageSize
, Integer pageNumber
, List
<OrderHint
> orderHints
, List
<String
> propertyPaths
) throws CorruptIndexException
, IOException
, ParseException
, LuceneMultiSearchException
{
1069 return defaultTaxonService
.findByEverythingFullText(queryString
, classification
, languages
, highlightFragments
, pageSize
, pageNumber
, orderHints
, propertyPaths
);
1074 * @param queryString
1075 * @param classification
1077 * @param highlightFragments
1081 * @param propertyPaths
1083 * @throws CorruptIndexException
1084 * @throws IOException
1085 * @throws ParseException
1086 * @see eu.etaxonomy.cdm.api.service.ITaxonService#findByFullText(java.lang.Class, java.lang.String, eu.etaxonomy.cdm.model.taxon.Classification, java.util.List, boolean, java.lang.Integer, java.lang.Integer, java.util.List, java.util.List)
1089 public Pager
<SearchResult
<TaxonBase
>> findByFullText(Class
<?
extends TaxonBase
> clazz
, String queryString
, Classification classification
, List
<Language
> languages
, boolean highlightFragments
, Integer pageSize
, Integer pageNumber
, List
<OrderHint
> orderHints
, List
<String
> propertyPaths
) throws CorruptIndexException
, IOException
, ParseException
{
1090 return defaultTaxonService
.findByFullText(clazz
, queryString
, classification
, languages
, highlightFragments
, pageSize
, pageNumber
, orderHints
, propertyPaths
);
1095 * @param statusFilter
1096 * @param classification
1100 * @param propertyPaths
1102 * @throws IOException
1103 * @throws ParseException
1104 * @see eu.etaxonomy.cdm.api.service.ITaxonService#findByDistribution(java.util.List, java.util.List, eu.etaxonomy.cdm.model.taxon.Classification, java.lang.Integer, java.lang.Integer, java.util.List, java.util.List)
1107 public Pager
<SearchResult
<TaxonBase
>> findByDistribution(List
<NamedArea
> areaFilter
, List
<PresenceAbsenceTermBase
<?
>> statusFilter
, Classification classification
, Integer pageSize
, Integer pageNumber
, List
<OrderHint
> orderHints
, List
<String
> propertyPaths
) throws IOException
, ParseException
{
1108 return defaultTaxonService
.findByDistribution(areaFilter
, statusFilter
, classification
, pageSize
, pageNumber
, orderHints
, propertyPaths
);
1112 * @param searchModes
1113 * @param queryString
1114 * @param classification
1116 * @param distributionStatus
1118 * @param highlightFragments
1122 * @param propertyPaths
1124 * @throws CorruptIndexException
1125 * @throws IOException
1126 * @throws ParseException
1127 * @throws LuceneMultiSearchException
1128 * @see eu.etaxonomy.cdm.api.service.ITaxonService#findTaxaAndNamesByFullText(java.util.EnumSet, java.lang.String, eu.etaxonomy.cdm.model.taxon.Classification, java.util.Set, java.util.Set, java.util.List, boolean, java.lang.Integer, java.lang.Integer, java.util.List, java.util.List)
1131 public Pager
<SearchResult
<TaxonBase
>> findTaxaAndNamesByFullText(EnumSet
<TaxaAndNamesSearchMode
> searchModes
, String queryString
, Classification classification
, Set
<NamedArea
> namedAreas
, Set
<PresenceAbsenceTermBase
<?
>> distributionStatus
, List
<Language
> languages
, boolean highlightFragments
, Integer pageSize
, Integer pageNumber
, List
<OrderHint
> orderHints
, List
<String
> propertyPaths
) throws CorruptIndexException
, IOException
, ParseException
, LuceneMultiSearchException
{
1132 return defaultTaxonService
.findTaxaAndNamesByFullText(searchModes
, queryString
, classification
, namedAreas
, distributionStatus
, languages
, highlightFragments
, pageSize
, pageNumber
, orderHints
, propertyPaths
);
1137 * @param queryString
1138 * @param classification
1141 * @param highlightFragments
1145 * @param propertyPaths
1147 * @throws CorruptIndexException
1148 * @throws IOException
1149 * @throws ParseException
1150 * @see eu.etaxonomy.cdm.api.service.ITaxonService#findByDescriptionElementFullText(java.lang.Class, java.lang.String, eu.etaxonomy.cdm.model.taxon.Classification, java.util.List, java.util.List, boolean, java.lang.Integer, java.lang.Integer, java.util.List, java.util.List)
1153 public Pager
<SearchResult
<TaxonBase
>> findByDescriptionElementFullText(Class
<?
extends DescriptionElementBase
> clazz
, String queryString
, Classification classification
, List
<Feature
> features
, List
<Language
> languages
, boolean highlightFragments
, Integer pageSize
, Integer pageNumber
, List
<OrderHint
> orderHints
, List
<String
> propertyPaths
) throws CorruptIndexException
, IOException
, ParseException
{
1154 return defaultTaxonService
.findByDescriptionElementFullText(clazz
, queryString
, classification
, features
, languages
, highlightFragments
, pageSize
, pageNumber
, orderHints
, propertyPaths
);
1161 * @param widthOrDuration
1165 * @see eu.etaxonomy.cdm.api.service.ITaxonService#getAllMedia(eu.etaxonomy.cdm.model.taxon.Taxon, int, int, int, java.lang.String[])
1169 public List
<MediaRepresentation
> getAllMedia(Taxon taxon
, int size
, int height
, int widthOrDuration
, String
[] mimeTypes
) {
1170 return defaultTaxonService
.getAllMedia(taxon
, size
, height
, widthOrDuration
, mimeTypes
);
1175 * @param includeRelationships
1176 * @param limitToGalleries
1177 * @param propertyPath
1180 * @see eu.etaxonomy.cdm.api.service.ITaxonService#listTaxonDescriptionMedia(eu.etaxonomy.cdm.model.taxon.Taxon, java.util.Set, boolean, java.util.List)
1184 public List
<Media
> listTaxonDescriptionMedia(Taxon taxon
, Set
<TaxonRelationshipEdge
> includeRelationships
, boolean limitToGalleries
, List
<String
> propertyPath
) {
1185 return defaultTaxonService
.listTaxonDescriptionMedia(taxon
, includeRelationships
, limitToGalleries
, propertyPath
);
1190 * @param includeRelationships
1191 * @param limitToGalleries
1192 * @param includeTaxonDescriptions
1193 * @param includeOccurrences
1194 * @param includeTaxonNameDescriptions
1195 * @param propertyPath
1197 * @see eu.etaxonomy.cdm.api.service.ITaxonService#listMedia(eu.etaxonomy.cdm.model.taxon.Taxon, java.util.Set, java.lang.Boolean, java.lang.Boolean, java.lang.Boolean, java.lang.Boolean, java.util.List)
1200 public List
<Media
> listMedia(Taxon taxon
, Set
<TaxonRelationshipEdge
> includeRelationships
, Boolean limitToGalleries
, Boolean includeTaxonDescriptions
, Boolean includeOccurrences
, Boolean includeTaxonNameDescriptions
, List
<String
> propertyPath
) {
1201 return defaultTaxonService
.listMedia(taxon
, includeRelationships
, limitToGalleries
, includeTaxonDescriptions
, includeOccurrences
, includeTaxonNameDescriptions
, propertyPath
);
1207 * @see eu.etaxonomy.cdm.api.service.ITaxonService#findTaxaByID(java.util.Set)
1210 public List
<TaxonBase
> findTaxaByID(Set
<Integer
> listOfIDs
) {
1211 return defaultTaxonService
.findTaxaByID(listOfIDs
);
1216 * @param propertyPaths
1218 * @see eu.etaxonomy.cdm.api.service.ITaxonService#findTaxonByUuid(java.util.UUID, java.util.List)
1221 public TaxonBase
findTaxonByUuid(UUID uuid
, List
<String
> propertyPaths
) {
1222 return defaultTaxonService
.findTaxonByUuid(uuid
, propertyPaths
);
1227 * @see eu.etaxonomy.cdm.api.service.ITaxonService#countAllRelationships()
1230 public int countAllRelationships() {
1231 return defaultTaxonService
.countAllRelationships();
1235 * @param propertyPath
1237 * @see eu.etaxonomy.cdm.api.service.ITaxonService#findIdenticalTaxonNames(java.util.List)
1240 public List
<TaxonNameBase
> findIdenticalTaxonNames(List
<String
> propertyPath
) {
1241 return defaultTaxonService
.findIdenticalTaxonNames(propertyPath
);
1245 * @param propertyPath
1247 * @see eu.etaxonomy.cdm.api.service.ITaxonService#findIdenticalTaxonNameIds(java.util.List)
1250 public List
<TaxonNameBase
> findIdenticalTaxonNameIds(List
<String
> propertyPath
) {
1251 return defaultTaxonService
.findIdenticalTaxonNameIds(propertyPath
);
1257 * @see eu.etaxonomy.cdm.api.service.ITaxonService#getPhylumName(eu.etaxonomy.cdm.model.name.TaxonNameBase)
1260 public String
getPhylumName(TaxonNameBase name
) {
1261 return defaultTaxonService
.getPhylumName(name
);
1267 * @see eu.etaxonomy.cdm.api.service.ITaxonService#deleteSynonymRelationships(eu.etaxonomy.cdm.model.taxon.Synonym)
1270 public long deleteSynonymRelationships(Synonym syn
) {
1271 return defaultTaxonService
.deleteSynonymRelationships(syn
);
1277 * @param removeNameIfPossible
1278 * @param newHomotypicGroupIfNeeded
1279 * @see eu.etaxonomy.cdm.api.service.ITaxonService#deleteSynonym(eu.etaxonomy.cdm.model.taxon.Synonym, eu.etaxonomy.cdm.model.taxon.Taxon, boolean, boolean)
1282 public void deleteSynonym(Synonym synonym
, Taxon taxon
, boolean removeNameIfPossible
, boolean newHomotypicGroupIfNeeded
) {
1283 defaultTaxonService
.deleteSynonym(synonym
, taxon
, removeNameIfPossible
, newHomotypicGroupIfNeeded
);
1292 * @param propertyPaths
1295 * @see eu.etaxonomy.cdm.api.service.ITaxonService#listSynonymRelationships(eu.etaxonomy.cdm.model.taxon.TaxonBase, eu.etaxonomy.cdm.model.taxon.SynonymRelationshipType, java.lang.Integer, java.lang.Integer, java.util.List, java.util.List, eu.etaxonomy.cdm.model.common.RelationshipBase.Direction)
1298 public List
<SynonymRelationship
> listSynonymRelationships(TaxonBase taxonBase
, SynonymRelationshipType type
, Integer pageSize
, Integer pageNumber
, List
<OrderHint
> orderHints
, List
<String
> propertyPaths
, Direction direction
) {
1299 return defaultTaxonService
.listSynonymRelationships(taxonBase
, type
, pageSize
, pageNumber
, orderHints
, propertyPaths
, direction
);
1305 * @see eu.etaxonomy.cdm.api.service.ITaxonService#findBestMatchingTaxon(java.lang.String)
1308 public Taxon
findBestMatchingTaxon(String taxonName
) {
1309 return defaultTaxonService
.findBestMatchingTaxon(taxonName
);
1315 * @see eu.etaxonomy.cdm.api.service.ITaxonService#findBestMatchingTaxon(eu.etaxonomy.cdm.api.service.config.MatchingTaxonConfigurator)
1318 public Taxon
findBestMatchingTaxon(MatchingTaxonConfigurator config
) {
1319 return defaultTaxonService
.findBestMatchingTaxon(config
);
1325 * @see eu.etaxonomy.cdm.api.service.ITaxonService#findBestMatchingSynonym(java.lang.String)
1328 public Synonym
findBestMatchingSynonym(String taxonName
) {
1329 return defaultTaxonService
.findBestMatchingSynonym(taxonName
);
1334 * @see eu.etaxonomy.cdm.api.service.ITaxonService#getUuidAndTitleCacheTaxon()
1337 public List
<UuidAndTitleCache
<TaxonBase
>> getUuidAndTitleCacheTaxon() {
1338 return defaultTaxonService
.getUuidAndTitleCacheTaxon();
1343 * @see eu.etaxonomy.cdm.api.service.ITaxonService#getUuidAndTitleCacheSynonym()
1346 public List
<UuidAndTitleCache
<TaxonBase
>> getUuidAndTitleCacheSynonym() {
1347 return defaultTaxonService
.getUuidAndTitleCacheSynonym();
1351 * @param configurator
1353 * @see eu.etaxonomy.cdm.api.service.ITaxonService#findTaxaAndNamesForEditor(eu.etaxonomy.cdm.api.service.config.IFindTaxaAndNamesConfigurator)
1356 public List
<UuidAndTitleCache
<TaxonBase
>> findTaxaAndNamesForEditor(IFindTaxaAndNamesConfigurator configurator
) {
1357 return defaultTaxonService
.findTaxaAndNamesForEditor(configurator
);
1364 * @param doWithMisappliedNames
1366 * @see eu.etaxonomy.cdm.api.service.ITaxonService#createInferredSynonyms(eu.etaxonomy.cdm.model.taxon.Taxon, eu.etaxonomy.cdm.model.taxon.Classification, eu.etaxonomy.cdm.model.taxon.SynonymRelationshipType, boolean)
1369 public List
<Synonym
> createInferredSynonyms(Taxon taxon
, Classification tree
, SynonymRelationshipType type
, boolean doWithMisappliedNames
) {
1370 return defaultTaxonService
.createInferredSynonyms(taxon
, tree
, type
, doWithMisappliedNames
);
1376 * @param doWithMisappliedNames
1378 * @see eu.etaxonomy.cdm.api.service.ITaxonService#createAllInferredSynonyms(eu.etaxonomy.cdm.model.taxon.Taxon, eu.etaxonomy.cdm.model.taxon.Classification, boolean)
1381 public List
<Synonym
> createAllInferredSynonyms(Taxon taxon
, Classification tree
, boolean doWithMisappliedNames
) {
1382 return defaultTaxonService
.createAllInferredSynonyms(taxon
, tree
, doWithMisappliedNames
);