eu.etaxonomy.taxeditor.store/src/main/java/eu/etaxonomy/taxeditor/view/derivateSearch/DerivateLabelProvider.java

   1 // $Id$
   2 /**
   3 * Copyright (C) 2013 EDIT
   4 * European Distributed Institute of Taxonomy
   5 * http://www.e-taxonomy.eu
   6 *
   7 * The contents of this file are subject to the Mozilla Public License Version 1.1
   8 * See LICENSE.TXT at the top of this package for the full license terms.
   9 */
  10 package eu.etaxonomy.taxeditor.view.derivateSearch;
  11
  12 import java.util.ArrayList;
  13 import java.util.Collection;
  14 import java.util.HashMap;
  15 import java.util.HashSet;
  16 import java.util.List;
  17 import java.util.Map;
  18 import java.util.Map.Entry;
  19 import java.util.Set;
  20 import java.util.UUID;
  21
  22 import org.eclipse.jface.viewers.ColumnLabelProvider;
  23 import org.eclipse.jface.viewers.TreeNode;
  24 import org.eclipse.swt.graphics.Image;
  25 import org.hibernate.LazyInitializationException;
  26
  27 import eu.etaxonomy.cdm.api.conversation.ConversationHolder;
  28 import eu.etaxonomy.cdm.api.service.IOccurrenceService;
  29 import eu.etaxonomy.cdm.api.service.molecular.ISequenceService;
  30 import eu.etaxonomy.cdm.format.CdmFormatterFactory;
  31 import eu.etaxonomy.cdm.format.ICdmFormatter;
  32 import eu.etaxonomy.cdm.format.ICdmFormatter.FormatKey;
  33 import eu.etaxonomy.cdm.hibernate.HibernateProxyHelper;
  34 import eu.etaxonomy.cdm.model.common.CdmBase;
  35 import eu.etaxonomy.cdm.model.common.DefinedTerm;
  36 import eu.etaxonomy.cdm.model.common.Identifier;
  37 import eu.etaxonomy.cdm.model.molecular.DnaSample;
  38 import eu.etaxonomy.cdm.model.molecular.Sequence;
  39 import eu.etaxonomy.cdm.model.molecular.SingleRead;
  40 import eu.etaxonomy.cdm.model.name.SpecimenTypeDesignation;
  41 import eu.etaxonomy.cdm.model.occurrence.DerivedUnit;
  42 import eu.etaxonomy.cdm.model.occurrence.FieldUnit;
  43 import eu.etaxonomy.cdm.model.occurrence.GatheringEvent;
  44 import eu.etaxonomy.cdm.model.occurrence.MediaSpecimen;
  45 import eu.etaxonomy.cdm.model.occurrence.SpecimenOrObservationBase;
  46 import eu.etaxonomy.cdm.model.occurrence.SpecimenOrObservationType;
  47 import eu.etaxonomy.taxeditor.model.ImageResources;
  48 import eu.etaxonomy.taxeditor.store.CdmStore;
  49
  50 /**
  51  * Label provider for the views to show {@link SpecimenOrObservationBase}s.<br>
  52  * <br>
  53  * <b>Note:</b> If you use this label provider you need to assure that you
  54  * created a {@link ConversationHolder} resp. have an open session because
  55  * the labels are generated from various fields of the derivate hierarchy which
  56  * are lazy loaded and could therefore throw a {@link LazyInitializationException}.<br>
  57  * Use <b>{@link #setConversation(ConversationHolder)}</b> to assign the session to this provider.
  58  */
  59 public class DerivateLabelProvider extends ColumnLabelProvider {
  60
  61     private static final String NO_SAMPLE_DESIGNATION = "[no sample designation]";
  62
  63     private static Set<SingleRead> multiLinkSingleReads;
  64
  65     private static Map<DerivedUnit, Collection<SpecimenTypeDesignation>> typeDesignations;
  66
  67     private static Map<Class<? extends Object>, ICdmFormatter> formatterMap = new HashMap<>();
  68
  69     private ConversationHolder conversation;
  70
  71     private static DefinedTerm photoTerm = null;
  72     private static DefinedTerm drawingTerm = null;
  73     private static DefinedTerm specimenScanTerm = null;
  74     private static DefinedTerm detailImageTerm = null;
  75     private static DefinedTerm sampleDesignationTerm = null;
  76
  77     //FIXME: move static term getters to new singleton utility class
  78     private static void initializeTerms() {
  79         List<DefinedTerm> preferredTerms = CdmStore.getTermManager().getPreferredTerms(DefinedTerm.class);
  80         for (DefinedTerm definedTerm : preferredTerms) {
  81             if(definedTerm.getUuid().equals(UUID.fromString("c5c59c42-f254-471e-96c6-09f459f7c903"))){
  82                 photoTerm = definedTerm;
  83             }
  84             else if(definedTerm.getUuid().equals(UUID.fromString("669b0409-4aa4-4695-aae4-a95ed27bad4c"))){
  85                 drawingTerm = definedTerm;
  86             }
  87             else if(definedTerm.getUuid().equals(UUID.fromString("acda15be-c0e2-4ea8-8783-b9b0c4ad7f03"))){
  88                 specimenScanTerm = definedTerm;
  89             }
  90             else if(definedTerm.getUuid().equals(UUID.fromString("31eb8d02-bf5d-437c-bcc6-87a626445f34"))){
  91                 detailImageTerm = definedTerm;
  92             }
  93             else if(definedTerm.getUuid().equals(UUID.fromString("fadeba12-1be3-4bc7-9ff5-361b088d86fc"))){
  94                 sampleDesignationTerm = definedTerm;
  95             }
  96         }
  97     }
  98
  99     public static DefinedTerm getLivingPlantPhotoTerm(){
 100         if(photoTerm==null){
 101             initializeTerms();
 102         }
 103         return photoTerm;
 104     }
 105
 106     public static DefinedTerm getArtworkTerm(){
 107         if(drawingTerm==null){
 108             initializeTerms();
 109         }
 110         return drawingTerm;
 111     }
 112
 113     public static DefinedTerm getSpecimenScanTerm(){
 114         if(specimenScanTerm==null){
 115             initializeTerms();
 116         }
 117         return specimenScanTerm;
 118     }
 119
 120     public static DefinedTerm getDetailImageTerm(){
 121         if(detailImageTerm==null){
 122             initializeTerms();
 123         }
 124         return detailImageTerm;
 125     }
 126
 127     public static DefinedTerm getSampleDesignationTerm(){
 128         if(sampleDesignationTerm==null){
 129             initializeTerms();
 130         }
 131         return sampleDesignationTerm;
 132     }
 133
 134
 135     /** {@inheritDoc} */
 136     @Override
 137     public String getText(Object element) {
 138         if(element instanceof TreeNode){
 139             element = ((TreeNode) element).getValue();
 140         }
 141         FormatKey[] formatKeys = {
 142                 FormatKey.GATHERING_COUNTRY, FormatKey.SPACE,
 143                 FormatKey.GATHERING_LOCALITY_TEXT, FormatKey.SPACE,
 144                 FormatKey.GATHERING_DATE, FormatKey.SPACE,
 145                 FormatKey.GATHERING_COLLECTOR, FormatKey.SPACE,
 146                 FormatKey.FIELD_NUMBER, FormatKey.SPACE,
 147                 FormatKey.COLLECTION_CODE, FormatKey.SPACE,
 148                 FormatKey.MOST_SIGNIFICANT_IDENTIFIER, FormatKey.SPACE,
 149                 FormatKey.KIND_OF_UNIT, FormatKey.SPACE,
 150                 FormatKey.SAMPLE_DESIGNATION, FormatKey.SPACE,
 151                 FormatKey.SINGLE_READ_PRIMER, FormatKey.SPACE,
 152                 FormatKey.SEQUENCE_DNA_MARKER, FormatKey.SPACE,
 153                 FormatKey.AMPLIFICATION_LABEL, FormatKey.SPACE,
 154                 FormatKey.MEDIA_TITLE, FormatKey.SPACE,
 155                 FormatKey.MEDIA_ARTIST, FormatKey.SPACE
 156         };
 157         ICdmFormatter formatter = formatterMap.get(element.getClass());
 158         if(formatter==null){
 159                 formatter = CdmFormatterFactory.getFormatter(element, formatKeys);
 160                 formatterMap.put(element.getClass(), formatter);
 161         }
 162         return formatter.format(element);
 163     }
 164
 165     /** {@inheritDoc} */
 166     @Override
 167     public String getToolTipText(Object element) {
 168         return getDerivateText(element);
 169     }
 170
 171     /**
 172      * @param conversation the conversation to set
 173      */
 174     public void setConversation(ConversationHolder conversation) {
 175         this.conversation = conversation;
 176     }
 177
 178     public String getDerivateText(Object element){
 179         return getDerivateText(element, conversation);
 180     }
 181
 182     public static String getDerivateText(Object element, ConversationHolder conversation){
 183         //TODO: use list of strings to assemble labels to avoid adding the separator every time and to allow null values
 184         TreeNode parentNode = null;
 185         TreeNode node = null;
 186         Object derivate = element;
 187         if(element instanceof TreeNode){
 188             node = (TreeNode) element;
 189             parentNode = node.getParent();
 190             //unwrap specimen from TreeNode
 191             derivate = node.getValue();
 192         }
 193
 194         if(conversation!=null){
 195             conversation.bind();
 196         }
 197
 198         final String emptyString = "";
 199         final String separator = " ";
 200
 201         String label = emptyString;
 202
 203         //Field Unit
 204         if(derivate instanceof FieldUnit){
 205             FieldUnit fieldUnit = (FieldUnit)derivate;
 206             if(fieldUnit.getGatheringEvent()!=null){
 207                 GatheringEvent gatheringEvent = fieldUnit.getGatheringEvent();
 208                 label += gatheringEvent.getCountry()!=null?gatheringEvent.getCountry().getLabel()+separator:emptyString;
 209                 label += gatheringEvent.getLocality()!=null?gatheringEvent.getLocality().getText()+separator:emptyString;
 210                 label += gatheringEvent.getGatheringDate()!=null?gatheringEvent.getGatheringDate()+separator:emptyString;
 211                 label += gatheringEvent.getCollector()!=null?gatheringEvent.getCollector()+separator:emptyString;
 212             }
 213             label += fieldUnit.getFieldNumber()!=null?fieldUnit.getFieldNumber():emptyString;
 214         }
 215         //MediaSpecimen
 216         else if(derivate instanceof MediaSpecimen){
 217             MediaSpecimen mediaSpecimen = (MediaSpecimen)derivate;
 218             if(mediaSpecimen.getMediaSpecimen()!=null){
 219                 label += mediaSpecimen.getMediaSpecimen().getTitle()!=null?mediaSpecimen.getMediaSpecimen().getTitle().getText()+separator:"[no motif]";
 220                 label += mediaSpecimen.getMediaSpecimen().getArtist()!=null?mediaSpecimen.getMediaSpecimen().getArtist()+separator:emptyString;
 221             }
 222             eu.etaxonomy.cdm.model.occurrence.Collection collection = mediaSpecimen.getCollection();
 223             if(collection!=null){
 224                 label += collection.getName()!=null?collection.getName()+" ":emptyString;
 225                 label += collection.getCode()!=null?"("+collection.getCode()+")"+separator:emptyString;
 226             }
 227             label += mediaSpecimen.getAccessionNumber()!=null?mediaSpecimen.getAccessionNumber()+separator:emptyString;
 228             label += mediaSpecimen.getBarcode()!=null?mediaSpecimen.getBarcode()+separator:emptyString;
 229         }
 230         //TissueSample + DnaSample
 231         else if(derivate instanceof DnaSample){
 232             DnaSample dnaSample = (DnaSample)derivate;
 233             if(((DnaSample) derivate).getRecordBasis()==SpecimenOrObservationType.DnaSample){
 234                 Identifier<DnaSample> currentSampleDesignation = getCurrentSampleDesignation(dnaSample);
 235                 if(currentSampleDesignation!=null && currentSampleDesignation.getIdentifier()!=null){
 236                     label += currentSampleDesignation.getIdentifier()+separator;
 237                 }
 238                 else{
 239                     label += NO_SAMPLE_DESIGNATION+separator;
 240                 }
 241             }
 242             else if(((DnaSample) derivate).getRecordBasis()==SpecimenOrObservationType.TissueSample){
 243                 if(dnaSample.getKindOfUnit()!=null){
 244                     label += dnaSample.getKindOfUnit()+separator;
 245                 }
 246                 Identifier<DnaSample> currentSampleDesignation = getCurrentSampleDesignation(dnaSample);
 247                 if(currentSampleDesignation!=null && currentSampleDesignation.getIdentifier()!=null){
 248                     label += currentSampleDesignation.getIdentifier()+separator;
 249                 }
 250                 else{
 251                     label += NO_SAMPLE_DESIGNATION+separator;
 252                 }
 253             }
 254
 255         }
 256         //DerivedUnit + TissueSample
 257         else if(derivate instanceof DerivedUnit){
 258             DerivedUnit derivedUnit = (DerivedUnit)derivate;
 259             if(derivedUnit.getRecordBasis()==SpecimenOrObservationType.PreservedSpecimen){
 260                 //check for type designation
 261                 if(typeDesignations.get(derivedUnit)==null){
 262                     for (SpecimenTypeDesignation specimenTypeDesignation : CdmStore.getService(IOccurrenceService.class).listTypeDesignations(derivedUnit, null, null, null, null)) {
 263                         addTypeDesignation(derivedUnit, specimenTypeDesignation);
 264                     }
 265                 }
 266                 //java.util.Collection<FieldUnit> fieldUnits = CdmStore.getService(IOccurrenceService.class).getFieldUnits(derivedUnit.getUuid());
 267                 //TODO : This is not generic anymore for performance reasons
 268                 Set<SpecimenOrObservationBase> originals = derivedUnit.getOriginals();
 269                 if(originals!=null && originals.size() ==1) {
 270                     SpecimenOrObservationBase specimen = originals.iterator().next();
 271                     if(specimen instanceof FieldUnit) {
 272                         FieldUnit fieldUnit = (FieldUnit)specimen;
 273                         GatheringEvent gatheringEvent = fieldUnit.getGatheringEvent();
 274                         if(gatheringEvent!=null){
 275                             label += gatheringEvent.getCollector()!=null?gatheringEvent.getCollector()+separator:emptyString;
 276                         }
 277                         label += fieldUnit.getFieldNumber()!=null?fieldUnit.getFieldNumber()+separator:emptyString;
 278                     }
 279                 }
 280
 281                 eu.etaxonomy.cdm.model.occurrence.Collection collection = derivedUnit.getCollection();
 282                 if(collection!=null){
 283                     label += collection.getCode()!=null?"("+collection.getCode()+")"+separator:emptyString;
 284                 }
 285                 String mostSignificantIdentifier = derivedUnit.getMostSignificantIdentifier();
 286                 label += mostSignificantIdentifier!=null?mostSignificantIdentifier+separator:emptyString;
 287             }
 288             else if(derivedUnit.getRecordBasis()==SpecimenOrObservationType.TissueSample){
 289                 //TissueSample should only be created by using it's own class
 290                 //in future using only one class with different SpecimenOrObservationTypes is desired
 291 //                label += derivedUnit.getKindOfUnit() + NO_SAMPLE_DESIGNATION;
 292             }
 293         }
 294         //Sequence
 295         else if(derivate instanceof Sequence){
 296             Sequence sequence = (Sequence)derivate;
 297             Identifier<DnaSample> currentSampleDesignation = getCurrentSampleDesignation(sequence);
 298             if(currentSampleDesignation!=null && currentSampleDesignation.getIdentifier()!=null){
 299                 label += currentSampleDesignation.getIdentifier()+separator;
 300             }
 301             else{
 302                 label += NO_SAMPLE_DESIGNATION+separator;
 303             }
 304             label += sequence.getDnaMarker()!=null?sequence.getDnaMarker():emptyString;
 305         }
 306         //SingleRead
 307         else if(derivate instanceof SingleRead){
 308             SingleRead singleRead = (SingleRead)derivate;
 309             if(parentNode!=null && parentNode.getValue() instanceof Sequence){
 310                 Sequence sequence = (Sequence) parentNode.getValue();
 311                 Identifier<DnaSample> currentSampleDesignation = getCurrentSampleDesignation(sequence);
 312                 if(currentSampleDesignation!=null && currentSampleDesignation.getIdentifier()!=null){
 313                     label = currentSampleDesignation.getIdentifier()+separator;
 314                 }
 315                 else{
 316                     label += NO_SAMPLE_DESIGNATION+separator;
 317                 }
 318                 label += singleRead.getPrimer()!=null?singleRead.getPrimer().getLabel()+separator:emptyString;
 319                 if(sequence!=null && sequence.getDnaMarker()!=null){
 320                     label += sequence.getDnaMarker()+separator;
 321                 }
 322                 if(singleRead.getAmplificationResult()!=null && singleRead.getAmplificationResult().getAmplification()!=null){
 323                     label += singleRead.getAmplificationResult().getAmplification().getLabelCache()+separator;
 324                 }
 325             }
 326         }
 327         //SOOB
 328         else if(derivate instanceof SpecimenOrObservationBase){
 329             SpecimenOrObservationBase<?> specimen = (SpecimenOrObservationBase<?>) derivate;
 330             SpecimenOrObservationType type = specimen.getRecordBasis();
 331             return specimen.getTitleCache() + (type!=null?" ["+type.toString()+"]":emptyString);
 332         }
 333         if(label.isEmpty()){
 334             label = derivate.toString();
 335         }
 336         //remove last comma
 337         else if(label.endsWith(separator)){
 338             label = label.substring(0, label.length()-separator.length());
 339         }
 340         return label;
 341     }
 342
 343     @Override
 344     public Image getImage(Object element) {
 345         if(element instanceof TreeNode){
 346             element = ((TreeNode) element).getValue();
 347         }
 348         if(element instanceof CdmBase){
 349             CdmBase cdmBase = (CdmBase)element;
 350             boolean hasCharacterData = false;
 351             if(cdmBase.isInstanceOf(SpecimenOrObservationBase.class)){
 352                 SpecimenOrObservationBase<?> specimen = HibernateProxyHelper.deproxy(cdmBase, SpecimenOrObservationBase.class);
 353                 if(specimen.hasCharacterData()){
 354                     hasCharacterData = true;
 355                 }
 356             }
 357             if(cdmBase.isInstanceOf(FieldUnit.class)){
 358                 return hasCharacterData?ImageResources.getImage(ImageResources.FIELD_UNIT_CHARACTER_DATA):ImageResources.getImage(ImageResources.FIELD_UNIT);
 359             }
 360             else if(cdmBase.isInstanceOf(DerivedUnit.class)){
 361                 DerivedUnit derivedUnit = HibernateProxyHelper.deproxy(element, DerivedUnit.class);
 362
 363                 if(derivedUnit.getRecordBasis()==SpecimenOrObservationType.FieldUnit){
 364                     return hasCharacterData?ImageResources.getImage(ImageResources.FIELD_UNIT_CHARACTER_DATA):ImageResources.getImage(ImageResources.FIELD_UNIT);
 365                 }
 366                 else if(derivedUnit.getRecordBasis()==SpecimenOrObservationType.DnaSample){
 367                     return hasCharacterData?ImageResources.getImage(ImageResources.DNA_SAMPLE_DERIVATE_CHARACTER_DATA):ImageResources.getImage(ImageResources.DNA_SAMPLE_DERIVATE);
 368                 }
 369                 else if(derivedUnit.getRecordBasis()==SpecimenOrObservationType.TissueSample){
 370                     return hasCharacterData?ImageResources.getImage(ImageResources.TISSUE_SAMPLE_DERIVATE_CHARACTER_DATA):ImageResources.getImage(ImageResources.TISSUE_SAMPLE_DERIVATE);
 371                 }
 372                 else if(derivedUnit.getRecordBasis()==SpecimenOrObservationType.PreservedSpecimen){
 373                     if(typeDesignations.get(derivedUnit)!=null && !typeDesignations.get(derivedUnit).isEmpty()){
 374                         return ImageResources.getImage(ImageResources.SPECIMEN_DERIVATE_TYPE);
 375                     }
 376                     return hasCharacterData?ImageResources.getImage(ImageResources.SPECIMEN_DERIVATE_CHARACTER_DATA):ImageResources.getImage(ImageResources.SPECIMEN_DERIVATE);
 377                 }
 378                 else if(derivedUnit.getRecordBasis()==SpecimenOrObservationType.Media){
 379                     if(derivedUnit.getKindOfUnit()!=null){
 380                         if(derivedUnit.getKindOfUnit().equals(getArtworkTerm())){
 381                             return hasCharacterData?ImageResources.getImage(ImageResources.ARTWORK_DERIVATE_CHARACTER_DATA):ImageResources.getImage(ImageResources.ARTWORK_DERIVATE);
 382                         }
 383                         else if(derivedUnit.getKindOfUnit().equals(getLivingPlantPhotoTerm())){
 384                             return hasCharacterData?ImageResources.getImage(ImageResources.LIVING_PLANT_PHOTO_DERIVATE_CHARACTER_DATA):ImageResources.getImage(ImageResources.LIVING_PLANT_PHOTO_DERIVATE);
 385                         }
 386                         else if(derivedUnit.getKindOfUnit().equals(getSpecimenScanTerm())){
 387                             return hasCharacterData?ImageResources.getImage(ImageResources.SPECIMEN_SCAN_DERIVATE_CHARACTER_DATA):ImageResources.getImage(ImageResources.SPECIMEN_SCAN_DERIVATE);
 388                         }
 389                         else if(derivedUnit.getKindOfUnit().equals(getDetailImageTerm())){
 390                             return hasCharacterData?ImageResources.getImage(ImageResources.DETAIL_IMAGE_DERIVATE_CHARACTER_DATA):ImageResources.getImage(ImageResources.DETAIL_IMAGE_DERIVATE);
 391                         }
 392                     }
 393                 }
 394             }
 395             else if(cdmBase.isInstanceOf(Sequence.class)){
 396                 return ImageResources.getImage(ImageResources.SEQUENCE_DERIVATE);
 397             }
 398
 399             else if(cdmBase.isInstanceOf(SingleRead.class)){
 400                 if(multiLinkSingleReads!=null && multiLinkSingleReads.contains(element)){
 401                     return ImageResources.getImage(ImageResources.SINGLE_READ_DERIVATE_MULTILINK);
 402                 }
 403                 else{
 404                     return ImageResources.getImage(ImageResources.SINGLE_READ_DERIVATE);
 405                 }
 406             }
 407         }
 408         return super.getImage(element);
 409     }
 410
 411     public static Identifier<DnaSample> getCurrentSampleDesignation(CdmBase entity) {
 412         if(entity.isInstanceOf(DnaSample.class)){
 413             DnaSample dnaSample = HibernateProxyHelper.deproxy(entity, DnaSample.class);
 414             for (Identifier<DnaSample> identifier : dnaSample.getIdentifiers()) {
 415                 if(identifier.getType()!=null && identifier.getType().equals(DerivateLabelProvider.getSampleDesignationTerm())){
 416                     //first sample designation is the current
 417                     return identifier;
 418                 }
 419             }
 420         }
 421         else if(entity.isInstanceOf(Sequence.class)){
 422             Sequence sequence = HibernateProxyHelper.deproxy(entity, Sequence.class);
 423             if(sequence.getDnaSample()!=null){
 424                 return getCurrentSampleDesignation(sequence.getDnaSample());
 425             }
 426         }
 427         return null;
 428     }
 429
 430     private static void addTypeDesignation(DerivedUnit derivedUnit, SpecimenTypeDesignation typeDesignation){
 431         Collection<SpecimenTypeDesignation> list = typeDesignations.get(derivedUnit);
 432         if(list==null){
 433             list = new ArrayList<SpecimenTypeDesignation>();
 434         }
 435         list.add(typeDesignation);
 436         typeDesignations.put(derivedUnit, list);
 437     }
 438
 439     public static Set<SingleRead> getMultiLinkSingleReads() {
 440         return multiLinkSingleReads;
 441     }
 442
 443     public void updateLabelCache(Collection<SpecimenOrObservationBase<?>> rootElements) {
 444         multiLinkSingleReads = new HashSet<SingleRead>();
 445         typeDesignations = new HashMap<DerivedUnit, Collection<SpecimenTypeDesignation>>();
 446         for(Entry<SingleRead, Collection<Sequence>> entry:CdmStore.getService(ISequenceService.class).getSingleReadSequencesMap().entrySet()){
 447             if(entry.getValue().size()>1){
 448                 multiLinkSingleReads.add(entry.getKey());
 449             }
 450         }
 451         if(rootElements!=null){
 452             Collection<DerivedUnit> derivedUnits = new ArrayList<DerivedUnit>();
 453             for (SpecimenOrObservationBase specimenOrObservationBase : rootElements) {
 454                 derivedUnits.addAll(CdmStore.getService(IOccurrenceService.class).getAllChildDerivatives(specimenOrObservationBase.getUuid()));
 455                 if(specimenOrObservationBase.isInstanceOf(DerivedUnit.class)){
 456                     derivedUnits.add(HibernateProxyHelper.deproxy(specimenOrObservationBase, DerivedUnit.class));
 457                 }
 458             }
 459             typeDesignations = CdmStore.getService(IOccurrenceService.class).listTypeDesignations(derivedUnits, null, null, null, null);
 460         }
 461     }
 462
 463 }