eu.etaxonomy.taxeditor.store/src/main/java/eu/etaxonomy/taxeditor/ui/section/occurrence/dna/AmplificationGeneralDetailElement.java

   1 // $Id$
   2 /**
   3 * Copyright (C) 2013 EDIT
   4 * European Distributed Institute of Taxonomy
   5 * http://www.e-taxonomy.eu
   6 *
   7 * The contents of this file are subject to the Mozilla Public License Version 1.1
   8 * See LICENSE.TXT at the top of this package for the full license terms.
   9 */
  10 package eu.etaxonomy.taxeditor.ui.section.occurrence.dna;
  11
  12 import eu.etaxonomy.cdm.model.agent.AgentBase;
  13 import eu.etaxonomy.cdm.model.agent.Institution;
  14 import eu.etaxonomy.cdm.model.common.DefinedTerm;
  15 import eu.etaxonomy.cdm.model.common.TermType;
  16 import eu.etaxonomy.cdm.model.common.TimePeriod;
  17 import eu.etaxonomy.cdm.model.molecular.Amplification;
  18 import eu.etaxonomy.cdm.model.molecular.Primer;
  19 import eu.etaxonomy.taxeditor.ui.combo.TermComboElement;
  20 import eu.etaxonomy.taxeditor.ui.element.CdmFormFactory;
  21 import eu.etaxonomy.taxeditor.ui.element.ICdmFormElement;
  22 import eu.etaxonomy.taxeditor.ui.element.TextWithLabelElement;
  23 import eu.etaxonomy.taxeditor.ui.element.TimePeriodElement;
  24 import eu.etaxonomy.taxeditor.ui.section.AbstractCdmDetailElement;
  25 import eu.etaxonomy.taxeditor.ui.selection.EntitySelectionElement;
  26
  27 /**
  28  * @author pplitzner
  29  * @date 19.12.2013
  30  *
  31  */
  32 public class AmplificationGeneralDetailElement extends AbstractCdmDetailElement<Amplification> {
  33
  34     private TextWithLabelElement textDesignation;
  35     private TextWithLabelElement textNotes;
  36     private TermComboElement<DefinedTerm> comboMarker;
  37     private TimePeriodElement dateAmplification;
  38     private EntitySelectionElement<Institution> selectionInstitution;
  39     private EntitySelectionElement<AgentBase> selectionAmplificationStaff;
  40     private EntitySelectionElement<Primer> selectionPrimerFW;
  41     private EntitySelectionElement<Primer> selectionPrimerRW;
  42 //    private CheckboxElement checkBoxAmplificationSuccess;
  43 //    private TextWithLabelElement textAmplificationSuccessDetails;
  44 //    private TermComboElement<DefinedTerm> comboAmplificationMaterialOrMethod;
  45
  46 //    private NumberWithLabelElement numberGelVoltage;
  47 //    private NumberWithLabelElement numberGelConcentration;
  48 //    private NumberWithLabelElement numberGelRunningTime;
  49 //    private TextWithLabelElement textLadderUsed;
  50
  51 //    private TermComboElement<DefinedTerm> comboPurificationMaterialOrMethod;
  52
  53
  54     /**
  55      * @param formFactory
  56      * @param formElement
  57      */
  58     public AmplificationGeneralDetailElement(CdmFormFactory formFactory, ICdmFormElement formElement) {
  59         super(formFactory, formElement);
  60     }
  61
  62     /*
  63      * (non-Javadoc)
  64      *
  65      * @see
  66      * eu.etaxonomy.taxeditor.section.AbstractCdmDetailElement#createControls
  67      * (eu.etaxonomy.taxeditor.forms.ICdmFormElement, java.lang.Object, int)
  68      */
  69     @Override
  70     protected void createControls(ICdmFormElement formElement, Amplification entity, int style) {
  71         textDesignation = formFactory.createTextWithLabelElement(formElement, "Designation", entity.getDescription(), style);
  72         textDesignation.setEnabled(false);
  73         //TODO institution
  74         selectionAmplificationStaff = formFactory.createSelectionElement(AgentBase.class, getConversationHolder(), formElement, "Amplification staff", entity.getActor(), EntitySelectionElement.ALL, style);
  75         dateAmplification = formFactory.createTimePeriodElement(formElement, "Date", entity.getTimeperiod(), style);
  76         comboMarker = formFactory.createDefinedTermComboElement(TermType.DnaMarker, formElement, "DNA Marker", entity.getDnaMarker(), style);
  77         selectionPrimerFW = formFactory.createSelectionElement(Primer.class, getConversationHolder(), formElement, "Primer FW", entity.getForwardPrimer(), EntitySelectionElement.ALL, style);
  78         selectionPrimerRW = formFactory.createSelectionElement(Primer.class, getConversationHolder(), formElement, "Primer RW", entity.getReversePrimer(), EntitySelectionElement.ALL, style);
  79 //        checkBoxAmplificationSuccess = formFactory.createCheckbox(formElement, "Amplification Success", entity.getSuccessful(), style);
  80 //        textAmplificationSuccessDetails = formFactory.createTextWithLabelElement(formElement, "Ampl. Success Details", entity.getSuccessText(), style);
  81 //        comboAmplificationMaterialOrMethod = formFactory.createTermComboElement(DefinedTerm.class, formElement, "Ampl. Mat. & Meth.", entity.get, style)
  82 //        numberGelVoltage = formFactory.createNumberTextWithLabelElement(formElement, "Gel Voltage (V)", entity.getElectrophoresisVoltage(), style);
  83 //        numberGelConcentration = formFactory.createNumberTextWithLabelElement(formElement, "Gel Concentration", entity.getGelConcentration(), style);
  84 //        numberGelRunningTime = formFactory.createNumberTextWithLabelElement(formElement, "Gel Ruinning Time (Min)", entity.getGelRunningTime(), style);
  85 //        textLadderUsed = formFactory.createTextWithLabelElement(formElement, "Ladder Used", entity.getLadderUsed(), style);
  86 //        comboPurificationMaterialOrMethod = formFactory.createDefinedTermComboElement(TermType.MaterialOrMethod, formElement, "Purification Mat. & Meth.",
  87 //                entity.getPurification()==null?null:entity.getPurification().getDefinedMaterialOrMethod(), style);
  88         //TODO notes
  89         updateDesignationText();
  90     }
  91
  92     private void updateDesignationText(){
  93         String institutionName = "";
  94         String staffName = "";
  95         String dateString = "";
  96         //TODO institution
  97 //        Institution selection = selectionInstitution.getSelection();
  98 //        if(selection!=null){
  99 //            institutionName = selection.getName();
 100 //        }
 101         AgentBase staff = selectionAmplificationStaff.getSelection();
 102         if(staff!=null){
 103             staffName = staff.getTitleCache();
 104         }
 105         TimePeriod timePeriod = dateAmplification.getTimePeriod();
 106         if(timePeriod!=null){
 107             dateString = timePeriod.toString()!=null?timePeriod.toString():"";
 108         }
 109         String designation = "";
 110         if(!institutionName.equals("")){
 111             designation += institutionName;
 112         }
 113         if(!staffName.equals("")){
 114             if(!designation.equals("")){
 115                 designation += "_";
 116             }
 117             designation += staffName;
 118         }
 119         if(!dateString.equals("")){
 120             if(!designation.equals("")){
 121                 designation += "_";
 122             }
 123             designation += dateString;
 124         }
 125         textDesignation.setText(designation);
 126         getEntity().setDescription(designation);
 127     }
 128
 129     /*
 130      * (non-Javadoc)
 131      *
 132      * @see
 133      * eu.etaxonomy.taxeditor.section.AbstractCdmDetailElement#handleEvent(java
 134      * .lang.Object)
 135      */
 136     @Override
 137     public void handleEvent(Object eventSource) {
 138         if(eventSource==textNotes){
 139             getEntity().setDescription(textNotes.getText());
 140         }
 141         else if(eventSource==comboMarker){
 142             getEntity().setDnaMarker(comboMarker.getSelection());
 143         }
 144         else if(eventSource==dateAmplification){
 145             getEntity().setTimeperiod(dateAmplification.getTimePeriod());
 146             updateDesignationText();
 147         }
 148         else if(eventSource==selectionAmplificationStaff){
 149             getEntity().setActor(selectionAmplificationStaff.getEntity());
 150             updateDesignationText();
 151         }
 152         else if(eventSource==selectionInstitution){
 153             //TODO implement
 154             updateDesignationText();
 155         }
 156         else if(eventSource==selectionPrimerFW){
 157             getEntity().setForwardPrimer(selectionPrimerFW.getSelection());
 158         }
 159         else if(eventSource==selectionPrimerRW){
 160             getEntity().setReversePrimer(selectionPrimerRW.getSelection());
 161         }
 162 //        else if(eventSource==checkBoxAmplificationSuccess){
 163 //            getEntity().setSuccessful(checkBoxAmplificationSuccess.getSelection());
 164 //        }
 165 //        else if(eventSource==textAmplificationSuccessDetails){
 166 //            getEntity().setSuccessText(textAmplificationSuccessDetails.getText());
 167 //        }
 168 //        else if(eventSource==comboAmplificationMaterialOrMethod){
 169 //
 170 //        }
 171 //        else if(eventSource==numberGelVoltage){
 172 //            getEntity().setElectrophoresisVoltage(numberGelVoltage.getDouble());
 173 //        }
 174 //        else if(eventSource==numberGelConcentration){
 175 //            getEntity().setGelConcentration(numberGelConcentration.getDouble());
 176 //        }
 177 //        else if(eventSource==numberGelRunningTime){
 178 //            getEntity().setGelRunningTime(numberGelRunningTime.getDouble());
 179 //        }
 180 //        else if(eventSource==textLadderUsed){
 181 //            getEntity().setLadderUsed(textLadderUsed.getText());
 182 //        }
 183 //        else if(eventSource==comboPurificationMaterialOrMethod){
 184 //            MaterialOrMethodEvent purification = getEntity().getPurification();
 185 //            if(purification==null){
 186 //                purification = MaterialOrMethodEvent.NewInstance();
 187 //                getEntity().setPurification(purification);
 188 //            }
 189 //            purification.setDefinedMaterialOrMethod(comboPurificationMaterialOrMethod.getSelection());
 190 //        }
 191     }
 192 }