3 * Copyright (C) 2013 EDIT
4 * European Distributed Institute of Taxonomy
5 * http://www.e-taxonomy.eu
7 * The contents of this file are subject to the Mozilla Public License Version 1.1
8 * See LICENSE.TXT at the top of this package for the full license terms.
10 package eu
.etaxonomy
.taxeditor
.dataimport
.transientServices
;
12 import java
.io
.IOException
;
13 import java
.util
.Collection
;
14 import java
.util
.EnumSet
;
15 import java
.util
.List
;
18 import java
.util
.UUID
;
20 import org
.apache
.lucene
.index
.CorruptIndexException
;
21 import org
.apache
.lucene
.queryParser
.ParseException
;
22 import org
.hibernate
.LockMode
;
23 import org
.hibernate
.Session
;
24 import org
.hibernate
.criterion
.Criterion
;
25 import org
.hibernate
.envers
.query
.criteria
.AuditCriterion
;
27 import eu
.etaxonomy
.cdm
.api
.service
.ITaxonService
;
28 import eu
.etaxonomy
.cdm
.api
.service
.TaxaAndNamesSearchMode
;
29 import eu
.etaxonomy
.cdm
.api
.service
.config
.IFindTaxaAndNamesConfigurator
;
30 import eu
.etaxonomy
.cdm
.api
.service
.config
.IIdentifiableEntityServiceConfigurator
;
31 import eu
.etaxonomy
.cdm
.api
.service
.config
.MatchingTaxonConfigurator
;
32 import eu
.etaxonomy
.cdm
.api
.service
.config
.SynonymDeletionConfigurator
;
33 import eu
.etaxonomy
.cdm
.api
.service
.config
.TaxonDeletionConfigurator
;
34 import eu
.etaxonomy
.cdm
.api
.service
.exception
.DataChangeNoRollbackException
;
35 import eu
.etaxonomy
.cdm
.api
.service
.exception
.HomotypicalGroupChangeException
;
36 import eu
.etaxonomy
.cdm
.api
.service
.pager
.Pager
;
37 import eu
.etaxonomy
.cdm
.api
.service
.search
.LuceneMultiSearchException
;
38 import eu
.etaxonomy
.cdm
.api
.service
.search
.SearchResult
;
39 import eu
.etaxonomy
.cdm
.api
.service
.util
.TaxonRelationshipEdge
;
40 import eu
.etaxonomy
.cdm
.common
.monitor
.IProgressMonitor
;
41 import eu
.etaxonomy
.cdm
.model
.common
.Annotation
;
42 import eu
.etaxonomy
.cdm
.model
.common
.ISourceable
;
43 import eu
.etaxonomy
.cdm
.model
.common
.IdentifiableEntity
;
44 import eu
.etaxonomy
.cdm
.model
.common
.IdentifiableSource
;
45 import eu
.etaxonomy
.cdm
.model
.common
.LSID
;
46 import eu
.etaxonomy
.cdm
.model
.common
.Language
;
47 import eu
.etaxonomy
.cdm
.model
.common
.Marker
;
48 import eu
.etaxonomy
.cdm
.model
.common
.MarkerType
;
49 import eu
.etaxonomy
.cdm
.model
.common
.OrderedTermVocabulary
;
50 import eu
.etaxonomy
.cdm
.model
.common
.RelationshipBase
;
51 import eu
.etaxonomy
.cdm
.model
.common
.RelationshipBase
.Direction
;
52 import eu
.etaxonomy
.cdm
.model
.common
.UuidAndTitleCache
;
53 import eu
.etaxonomy
.cdm
.model
.description
.DescriptionElementBase
;
54 import eu
.etaxonomy
.cdm
.model
.description
.Feature
;
55 import eu
.etaxonomy
.cdm
.model
.description
.PresenceAbsenceTermBase
;
56 import eu
.etaxonomy
.cdm
.model
.location
.NamedArea
;
57 import eu
.etaxonomy
.cdm
.model
.media
.Media
;
58 import eu
.etaxonomy
.cdm
.model
.media
.MediaRepresentation
;
59 import eu
.etaxonomy
.cdm
.model
.media
.Rights
;
60 import eu
.etaxonomy
.cdm
.model
.name
.HomotypicalGroup
;
61 import eu
.etaxonomy
.cdm
.model
.name
.Rank
;
62 import eu
.etaxonomy
.cdm
.model
.name
.TaxonNameBase
;
63 import eu
.etaxonomy
.cdm
.model
.reference
.Reference
;
64 import eu
.etaxonomy
.cdm
.model
.taxon
.Classification
;
65 import eu
.etaxonomy
.cdm
.model
.taxon
.Synonym
;
66 import eu
.etaxonomy
.cdm
.model
.taxon
.SynonymRelationship
;
67 import eu
.etaxonomy
.cdm
.model
.taxon
.SynonymRelationshipType
;
68 import eu
.etaxonomy
.cdm
.model
.taxon
.Taxon
;
69 import eu
.etaxonomy
.cdm
.model
.taxon
.TaxonBase
;
70 import eu
.etaxonomy
.cdm
.model
.taxon
.TaxonRelationship
;
71 import eu
.etaxonomy
.cdm
.model
.taxon
.TaxonRelationshipType
;
72 import eu
.etaxonomy
.cdm
.model
.view
.AuditEvent
;
73 import eu
.etaxonomy
.cdm
.model
.view
.AuditEventRecord
;
74 import eu
.etaxonomy
.cdm
.persistence
.dao
.common
.AuditEventSort
;
75 import eu
.etaxonomy
.cdm
.persistence
.fetch
.CdmFetch
;
76 import eu
.etaxonomy
.cdm
.persistence
.query
.Grouping
;
77 import eu
.etaxonomy
.cdm
.persistence
.query
.MatchMode
;
78 import eu
.etaxonomy
.cdm
.persistence
.query
.OrderHint
;
79 import eu
.etaxonomy
.cdm
.strategy
.cache
.common
.IIdentifiableEntityCacheStrategy
;
80 import eu
.etaxonomy
.cdm
.strategy
.match
.IMatchStrategy
;
81 import eu
.etaxonomy
.cdm
.strategy
.merge
.IMergeStrategy
;
88 public class TransientTaxonService
implements ITaxonService
{
90 private final ITaxonService defaultTaxonService
;
93 * @param defaultTaxonService
95 public TransientTaxonService(ITaxonService defaultTaxonService
) {
96 this.defaultTaxonService
= defaultTaxonService
;
104 * @param propertyPaths
106 * @see eu.etaxonomy.cdm.api.service.IVersionableService#pageAuditEvents(eu.etaxonomy.cdm.model.common.VersionableEntity, java.lang.Integer, java.lang.Integer, eu.etaxonomy.cdm.persistence.dao.common.AuditEventSort, java.util.List)
109 public Pager
<AuditEventRecord
<TaxonBase
>> pageAuditEvents(TaxonBase t
, Integer pageSize
, Integer pageNumber
, AuditEventSort sort
, List
<String
> propertyPaths
) {
110 return defaultTaxonService
.pageAuditEvents(t
, pageSize
, pageNumber
, sort
, propertyPaths
);
114 * @param annotatedObj
119 * @param propertyPaths
121 * @see eu.etaxonomy.cdm.api.service.IAnnotatableService#getAnnotations(eu.etaxonomy.cdm.model.common.AnnotatableEntity, eu.etaxonomy.cdm.model.common.MarkerType, java.lang.Integer, java.lang.Integer, java.util.List, java.util.List)
124 public Pager
<Annotation
> getAnnotations(TaxonBase annotatedObj
, MarkerType status
, Integer pageSize
, Integer pageNumber
, List
<OrderHint
> orderHints
, List
<String
> propertyPaths
) {
125 return defaultTaxonService
.getAnnotations(annotatedObj
, status
, pageSize
, pageNumber
, orderHints
, propertyPaths
);
130 * @see eu.etaxonomy.cdm.api.service.IService#clear()
133 public void clear() {
134 defaultTaxonService
.clear();
140 * @see eu.etaxonomy.cdm.api.service.IService#lock(eu.etaxonomy.cdm.model.common.ICdmBase, org.hibernate.LockMode)
143 public void lock(TaxonBase t
, LockMode lockMode
) {
144 defaultTaxonService
.lock(t
, lockMode
);
150 * @param propertyPaths
151 * @see eu.etaxonomy.cdm.api.service.IService#refresh(eu.etaxonomy.cdm.model.common.ICdmBase, org.hibernate.LockMode, java.util.List)
154 public void refresh(TaxonBase t
, LockMode lockMode
, List
<String
> propertyPaths
) {
155 defaultTaxonService
.refresh(t
, lockMode
, propertyPaths
);
160 * @see eu.etaxonomy.cdm.api.service.IIdentifiableEntityService#updateTitleCache()
163 public void updateTitleCache() {
164 defaultTaxonService
.updateTitleCache();
170 * @see eu.etaxonomy.cdm.api.service.IVersionableService#getNextAuditEvent(eu.etaxonomy.cdm.model.common.VersionableEntity)
173 public AuditEventRecord
<TaxonBase
> getNextAuditEvent(TaxonBase t
) {
174 return defaultTaxonService
.getNextAuditEvent(t
);
178 * @param annotatableEntity
183 * @param propertyPaths
185 * @see eu.etaxonomy.cdm.api.service.IAnnotatableService#getMarkers(eu.etaxonomy.cdm.model.common.AnnotatableEntity, java.lang.Boolean, java.lang.Integer, java.lang.Integer, java.util.List, java.util.List)
188 public Pager
<Marker
> getMarkers(TaxonBase annotatableEntity
, Boolean technical
, Integer pageSize
, Integer pageNumber
, List
<OrderHint
> orderHints
, List
<String
> propertyPaths
) {
189 return defaultTaxonService
.getMarkers(annotatableEntity
, technical
, pageSize
, pageNumber
, orderHints
, propertyPaths
);
195 * @param cacheStrategy
197 * @see eu.etaxonomy.cdm.api.service.IIdentifiableEntityService#updateTitleCache(java.lang.Class, java.lang.Integer, eu.etaxonomy.cdm.strategy.cache.common.IIdentifiableEntityCacheStrategy, eu.etaxonomy.cdm.common.monitor.IProgressMonitor)
200 public void updateTitleCache(Class
<?
extends TaxonBase
> clazz
, Integer stepSize
, IIdentifiableEntityCacheStrategy
<TaxonBase
> cacheStrategy
, IProgressMonitor monitor
) {
201 defaultTaxonService
.updateTitleCache(clazz
, stepSize
, cacheStrategy
, monitor
);
207 * @see eu.etaxonomy.cdm.api.service.IVersionableService#getPreviousAuditEvent(eu.etaxonomy.cdm.model.common.VersionableEntity)
210 public AuditEventRecord
<TaxonBase
> getPreviousAuditEvent(TaxonBase t
) {
211 return defaultTaxonService
.getPreviousAuditEvent(t
);
217 * @see eu.etaxonomy.cdm.api.service.IService#count(java.lang.Class)
220 public int count(Class
<?
extends TaxonBase
> clazz
) {
221 return defaultTaxonService
.count(clazz
);
232 * @param propertyPaths
234 * @see eu.etaxonomy.cdm.api.service.IVersionableService#pageAuditEvents(java.lang.Class, eu.etaxonomy.cdm.model.view.AuditEvent, eu.etaxonomy.cdm.model.view.AuditEvent, java.util.List, java.lang.Integer, java.lang.Integer, eu.etaxonomy.cdm.persistence.dao.common.AuditEventSort, java.util.List)
237 public Pager
<AuditEventRecord
<TaxonBase
>> pageAuditEvents(Class
<?
extends TaxonBase
> clazz
, AuditEvent from
, AuditEvent to
, List
<AuditCriterion
> criteria
, Integer pageSize
, Integer pageValue
, AuditEventSort sort
, List
<String
> propertyPaths
) {
238 return defaultTaxonService
.pageAuditEvents(clazz
, from
, to
, criteria
, pageSize
, pageValue
, sort
, propertyPaths
);
244 * @see eu.etaxonomy.cdm.api.service.IIdentifiableEntityService#find(eu.etaxonomy.cdm.model.common.LSID)
247 public TaxonBase
find(LSID lsid
) {
248 return defaultTaxonService
.find(lsid
);
252 * @param persistentObject
254 * @see eu.etaxonomy.cdm.api.service.IService#delete(eu.etaxonomy.cdm.model.common.ICdmBase)
257 public UUID
delete(TaxonBase persistentObject
) {
258 return defaultTaxonService
.delete(persistentObject
);
266 * @param propertyPaths
268 * @see eu.etaxonomy.cdm.api.service.IAnnotatableService#groupMarkers(java.lang.Class, java.lang.Boolean, java.lang.Integer, java.lang.Integer, java.util.List)
271 public List
<Object
[]> groupMarkers(Class
<?
extends TaxonBase
> clazz
, Boolean technical
, Integer pageSize
, Integer pageNumber
, List
<String
> propertyPaths
) {
272 return defaultTaxonService
.groupMarkers(clazz
, technical
, pageSize
, pageNumber
, propertyPaths
);
278 * @see eu.etaxonomy.cdm.api.service.IService#exists(java.util.UUID)
281 public boolean exists(UUID uuid
) {
282 return defaultTaxonService
.exists(uuid
);
289 * @see eu.etaxonomy.cdm.api.service.ITaxonService#getAllSynonyms(int, int)
292 public List
<Synonym
> getAllSynonyms(int limit
, int start
) {
293 return defaultTaxonService
.getAllSynonyms(limit
, start
);
300 * @see eu.etaxonomy.cdm.api.service.IIdentifiableEntityService#replace(eu.etaxonomy.cdm.model.common.IdentifiableEntity, eu.etaxonomy.cdm.model.common.IdentifiableEntity)
303 public TaxonBase
replace(TaxonBase x
, TaxonBase y
) {
304 return defaultTaxonService
.replace(x
, y
);
311 * @see eu.etaxonomy.cdm.api.service.ITaxonService#getAllTaxa(int, int)
314 public List
<Taxon
> getAllTaxa(int limit
, int start
) {
315 return defaultTaxonService
.getAllTaxa(limit
, start
);
321 * @see eu.etaxonomy.cdm.api.service.IService#find(java.util.Set)
324 public List
<TaxonBase
> find(Set
<UUID
> uuidSet
) {
325 return defaultTaxonService
.find(uuidSet
);
332 * @param propertyPaths
334 * @see eu.etaxonomy.cdm.api.service.IIdentifiableEntityService#getSources(eu.etaxonomy.cdm.model.common.IdentifiableEntity, java.lang.Integer, java.lang.Integer, java.util.List)
337 public Pager
<IdentifiableSource
> getSources(TaxonBase t
, Integer pageSize
, Integer pageNumber
, List
<String
> propertyPaths
) {
338 return defaultTaxonService
.getSources(t
, pageSize
, pageNumber
, propertyPaths
);
344 * @param onlyWithChildren
347 * @see eu.etaxonomy.cdm.api.service.ITaxonService#getRootTaxa(eu.etaxonomy.cdm.model.reference.Reference, eu.etaxonomy.cdm.persistence.fetch.CdmFetch, boolean)
351 public List
<Taxon
> getRootTaxa(Reference sec
, CdmFetch cdmFetch
, boolean onlyWithChildren
) {
352 return defaultTaxonService
.getRootTaxa(sec
, cdmFetch
, onlyWithChildren
);
358 * @see eu.etaxonomy.cdm.api.service.IService#find(java.util.UUID)
361 public TaxonBase
find(UUID uuid
) {
362 return defaultTaxonService
.find(uuid
);
368 * @param onlyWithChildren
369 * @param withMisapplications
370 * @param propertyPaths
373 * @see eu.etaxonomy.cdm.api.service.ITaxonService#getRootTaxa(eu.etaxonomy.cdm.model.name.Rank, eu.etaxonomy.cdm.model.reference.Reference, boolean, boolean, java.util.List)
377 public List
<Taxon
> getRootTaxa(Rank rank
, Reference sec
, boolean onlyWithChildren
, boolean withMisapplications
, List
<String
> propertyPaths
) {
378 return defaultTaxonService
.getRootTaxa(rank
, sec
, onlyWithChildren
, withMisapplications
, propertyPaths
);
384 * @see eu.etaxonomy.cdm.api.service.IService#find(int)
387 public TaxonBase
find(int id
) {
388 return defaultTaxonService
.find(id
);
395 * @param propertyPaths
397 * @see eu.etaxonomy.cdm.api.service.IIdentifiableEntityService#getRights(eu.etaxonomy.cdm.model.common.IdentifiableEntity, java.lang.Integer, java.lang.Integer, java.util.List)
400 public Pager
<Rights
> getRights(TaxonBase t
, Integer pageSize
, Integer pageNumber
, List
<String
> propertyPaths
) {
401 return defaultTaxonService
.getRights(t
, pageSize
, pageNumber
, propertyPaths
);
408 * @see eu.etaxonomy.cdm.api.service.IAnnotatableService#countMarkers(java.lang.Class, java.lang.Boolean)
411 public int countMarkers(Class
<?
extends TaxonBase
> clazz
, Boolean technical
) {
412 return defaultTaxonService
.countMarkers(clazz
, technical
);
418 * @see eu.etaxonomy.cdm.api.service.IService#findById(java.util.Set)
421 public List
<TaxonBase
> findById(Set
<Integer
> idSet
) {
422 return defaultTaxonService
.findById(idSet
);
430 * @see eu.etaxonomy.cdm.api.service.IIdentifiableEntityService#getSourcedObjectByIdInSource(java.lang.Class, java.lang.String, java.lang.String)
433 public ISourceable
getSourcedObjectByIdInSource(Class clazz
, String idInSource
, String idNamespace
) {
434 return defaultTaxonService
.getSourcedObjectByIdInSource(clazz
, idInSource
, idNamespace
);
439 * @see eu.etaxonomy.cdm.api.service.IService#getSession()
442 public Session
getSession() {
443 return defaultTaxonService
.getSession();
448 * @see eu.etaxonomy.cdm.api.service.IIdentifiableEntityService#getUuidAndTitleCache()
451 public List
<UuidAndTitleCache
<TaxonBase
>> getUuidAndTitleCache() {
452 return defaultTaxonService
.getUuidAndTitleCache();
460 * @param propertyPaths
462 * @see eu.etaxonomy.cdm.api.service.IService#group(java.lang.Class, java.lang.Integer, java.lang.Integer, java.util.List, java.util.List)
465 public List
<Object
[]> group(Class
<?
extends TaxonBase
> clazz
, Integer limit
, Integer start
, List
<Grouping
> groups
, List
<String
> propertyPaths
) {
466 return defaultTaxonService
.group(clazz
, limit
, start
, groups
, propertyPaths
);
473 * @see eu.etaxonomy.cdm.api.service.ITaxonService#getAllRelationships(int, int)
476 public List
<RelationshipBase
> getAllRelationships(int limit
, int start
) {
477 return defaultTaxonService
.getAllRelationships(limit
, start
);
488 * @param propertyPaths
490 * @see eu.etaxonomy.cdm.api.service.IIdentifiableEntityService#findByTitle(java.lang.Class, java.lang.String, eu.etaxonomy.cdm.persistence.query.MatchMode, java.util.List, java.lang.Integer, java.lang.Integer, java.util.List, java.util.List)
493 public Pager
<TaxonBase
> findByTitle(Class
<?
extends TaxonBase
> clazz
, String queryString
, MatchMode matchmode
, List
<Criterion
> criteria
, Integer pageSize
, Integer pageNumber
, List
<OrderHint
> orderHints
, List
<String
> propertyPaths
) {
494 return defaultTaxonService
.findByTitle(clazz
, queryString
, matchmode
, criteria
, pageSize
, pageNumber
, orderHints
, propertyPaths
);
500 * @see eu.etaxonomy.cdm.api.service.ITaxonService#getTaxonRelationshipTypeVocabulary()
504 public OrderedTermVocabulary
<TaxonRelationshipType
> getTaxonRelationshipTypeVocabulary() {
505 return defaultTaxonService
.getTaxonRelationshipTypeVocabulary();
512 * @see eu.etaxonomy.cdm.api.service.ITaxonService#searchTaxaByName(java.lang.String, eu.etaxonomy.cdm.model.reference.Reference)
515 public List
<TaxonBase
> searchTaxaByName(String name
, Reference sec
) {
516 return defaultTaxonService
.searchTaxaByName(name
, sec
);
521 * @param acceptedTaxon
522 * @see eu.etaxonomy.cdm.api.service.ITaxonService#swapSynonymAndAcceptedTaxon(eu.etaxonomy.cdm.model.taxon.Synonym, eu.etaxonomy.cdm.model.taxon.Taxon)
525 public void swapSynonymAndAcceptedTaxon(Synonym synonym
, Taxon acceptedTaxon
) {
526 defaultTaxonService
.swapSynonymAndAcceptedTaxon(synonym
, acceptedTaxon
);
534 * @param propertyPaths
536 * @see eu.etaxonomy.cdm.api.service.IService#list(java.lang.Class, java.lang.Integer, java.lang.Integer, java.util.List, java.util.List)
539 public List
<TaxonBase
> list(Class
<?
extends TaxonBase
> type
, Integer limit
, Integer start
, List
<OrderHint
> orderHints
, List
<String
> propertyPaths
) {
540 return defaultTaxonService
.list(type
, limit
, start
, orderHints
, propertyPaths
);
544 * @param configurator
546 * @see eu.etaxonomy.cdm.api.service.IIdentifiableEntityService#findByTitle(eu.etaxonomy.cdm.api.service.config.IIdentifiableEntityServiceConfigurator)
549 public Pager
<TaxonBase
> findByTitle(IIdentifiableEntityServiceConfigurator
<TaxonBase
> configurator
) {
550 return defaultTaxonService
.findByTitle(configurator
);
555 * @param acceptedTaxon
556 * @param deleteSynonym
557 * @param copyCitationInfo
559 * @param microCitation
561 * @throws HomotypicalGroupChangeException
562 * @see eu.etaxonomy.cdm.api.service.ITaxonService#changeSynonymToAcceptedTaxon(eu.etaxonomy.cdm.model.taxon.Synonym, eu.etaxonomy.cdm.model.taxon.Taxon, boolean, boolean, eu.etaxonomy.cdm.model.reference.Reference, java.lang.String)
565 public Taxon
changeSynonymToAcceptedTaxon(Synonym synonym
, Taxon acceptedTaxon
, boolean deleteSynonym
, boolean copyCitationInfo
, Reference citation
, String microCitation
) throws HomotypicalGroupChangeException
{
566 return defaultTaxonService
.changeSynonymToAcceptedTaxon(synonym
, acceptedTaxon
, deleteSynonym
, copyCitationInfo
, citation
, microCitation
);
575 * @see eu.etaxonomy.cdm.api.service.IIdentifiableEntityService#countByTitle(java.lang.Class, java.lang.String, eu.etaxonomy.cdm.persistence.query.MatchMode, java.util.List)
578 public Integer
countByTitle(Class
<?
extends TaxonBase
> clazz
, String queryString
, MatchMode matchmode
, List
<Criterion
> criteria
) {
579 return defaultTaxonService
.countByTitle(clazz
, queryString
, matchmode
, criteria
);
585 * @see eu.etaxonomy.cdm.api.service.IService#load(java.util.UUID)
588 public TaxonBase
load(UUID uuid
) {
589 return defaultTaxonService
.load(uuid
);
594 * @param propertyPaths
596 * @see eu.etaxonomy.cdm.api.service.IService#load(java.util.UUID, java.util.List)
599 public TaxonBase
load(UUID uuid
, List
<String
> propertyPaths
) {
600 return defaultTaxonService
.load(uuid
, propertyPaths
);
604 * @param configurator
606 * @see eu.etaxonomy.cdm.api.service.IIdentifiableEntityService#countByTitle(eu.etaxonomy.cdm.api.service.config.IIdentifiableEntityServiceConfigurator)
609 public Integer
countByTitle(IIdentifiableEntityServiceConfigurator
<TaxonBase
> configurator
) {
610 return defaultTaxonService
.countByTitle(configurator
);
614 * @param transientObject
616 * @see eu.etaxonomy.cdm.api.service.IService#merge(eu.etaxonomy.cdm.model.common.ICdmBase)
619 public TaxonBase
merge(TaxonBase transientObject
) {
620 return defaultTaxonService
.merge(transientObject
);
631 * @param propertyPaths
633 * @see eu.etaxonomy.cdm.api.service.IIdentifiableEntityService#listByTitle(java.lang.Class, java.lang.String, eu.etaxonomy.cdm.persistence.query.MatchMode, java.util.List, java.lang.Integer, java.lang.Integer, java.util.List, java.util.List)
636 public List
<TaxonBase
> listByTitle(Class
<?
extends TaxonBase
> clazz
, String queryString
, MatchMode matchmode
, List
<Criterion
> criteria
, Integer pageSize
, Integer pageNumber
, List
<OrderHint
> orderHints
, List
<String
> propertyPaths
) {
637 return defaultTaxonService
.listByTitle(clazz
, queryString
, matchmode
, criteria
, pageSize
, pageNumber
, orderHints
, propertyPaths
);
645 * @param propertyPaths
647 * @see eu.etaxonomy.cdm.api.service.IService#page(java.lang.Class, java.lang.Integer, java.lang.Integer, java.util.List, java.util.List)
650 public Pager
<TaxonBase
> page(Class
<?
extends TaxonBase
> type
, Integer pageSize
, Integer pageNumber
, List
<OrderHint
> orderHints
, List
<String
> propertyPaths
) {
651 return defaultTaxonService
.page(type
, pageSize
, pageNumber
, orderHints
, propertyPaths
);
655 * @param persistentObject
657 * @see eu.etaxonomy.cdm.api.service.IService#refresh(eu.etaxonomy.cdm.model.common.ICdmBase)
660 public UUID
refresh(TaxonBase persistentObject
) {
661 return defaultTaxonService
.refresh(persistentObject
);
667 * @param taxonRelationshipType
669 * @param microReference
671 * @see eu.etaxonomy.cdm.api.service.ITaxonService#changeSynonymToRelatedTaxon(eu.etaxonomy.cdm.model.taxon.Synonym, eu.etaxonomy.cdm.model.taxon.Taxon, eu.etaxonomy.cdm.model.taxon.TaxonRelationshipType, eu.etaxonomy.cdm.model.reference.Reference, java.lang.String)
674 public Taxon
changeSynonymToRelatedTaxon(Synonym synonym
, Taxon toTaxon
, TaxonRelationshipType taxonRelationshipType
, Reference reference
, String microReference
) {
675 return defaultTaxonService
.changeSynonymToRelatedTaxon(synonym
, toTaxon
, taxonRelationshipType
, reference
, microReference
);
686 * @param propertyPaths
688 * @see eu.etaxonomy.cdm.api.service.IIdentifiableEntityService#listByReferenceTitle(java.lang.Class, java.lang.String, eu.etaxonomy.cdm.persistence.query.MatchMode, java.util.List, java.lang.Integer, java.lang.Integer, java.util.List, java.util.List)
691 public List
<TaxonBase
> listByReferenceTitle(Class
<?
extends TaxonBase
> clazz
, String queryString
, MatchMode matchmode
, List
<Criterion
> criteria
, Integer pageSize
, Integer pageNumber
, List
<OrderHint
> orderHints
, List
<String
> propertyPaths
) {
692 return defaultTaxonService
.listByReferenceTitle(clazz
, queryString
, matchmode
, criteria
, pageSize
, pageNumber
, orderHints
, propertyPaths
);
700 * @see eu.etaxonomy.cdm.api.service.IService#rows(java.lang.String, int, int)
703 public List
<TaxonBase
> rows(String tableName
, int limit
, int start
) {
704 return defaultTaxonService
.rows(tableName
, limit
, start
);
708 * @param newInstances
710 * @see eu.etaxonomy.cdm.api.service.IService#save(java.util.Collection)
713 public Map
<UUID
, TaxonBase
> save(Collection
<TaxonBase
> newInstances
) {
721 * @see eu.etaxonomy.cdm.api.service.ITaxonService#deleteSynonymRelationships(eu.etaxonomy.cdm.model.taxon.Synonym, eu.etaxonomy.cdm.model.taxon.Taxon)
724 public long deleteSynonymRelationships(Synonym syn
, Taxon taxon
) {
725 return defaultTaxonService
.deleteSynonymRelationships(syn
, taxon
);
731 * @see eu.etaxonomy.cdm.api.service.IService#save(eu.etaxonomy.cdm.model.common.ICdmBase)
734 public UUID
save(TaxonBase newInstance
) {
739 * @param transientObject
741 * @see eu.etaxonomy.cdm.api.service.IService#saveOrUpdate(eu.etaxonomy.cdm.model.common.ICdmBase)
744 public UUID
saveOrUpdate(TaxonBase transientObject
) {
750 * @param newHomotypicalGroup
752 * @param removeFromOtherTaxa
753 * @param setBasionymRelationIfApplicable
754 * @see eu.etaxonomy.cdm.api.service.ITaxonService#changeHomotypicalGroupOfSynonym(eu.etaxonomy.cdm.model.taxon.Synonym, eu.etaxonomy.cdm.model.name.HomotypicalGroup, eu.etaxonomy.cdm.model.taxon.Taxon, boolean, boolean)
757 public void changeHomotypicalGroupOfSynonym(Synonym synonym
, HomotypicalGroup newHomotypicalGroup
, Taxon targetTaxon
, boolean removeFromOtherTaxa
, boolean setBasionymRelationIfApplicable
) {
758 defaultTaxonService
.changeHomotypicalGroupOfSynonym(synonym
, newHomotypicalGroup
, targetTaxon
, removeFromOtherTaxa
, setBasionymRelationIfApplicable
);
762 * @param transientObjects
764 * @see eu.etaxonomy.cdm.api.service.IService#saveOrUpdate(java.util.Collection)
767 public Map
<UUID
, TaxonBase
> saveOrUpdate(Collection
<TaxonBase
> transientObjects
) {
772 * @param transientObject
774 * @see eu.etaxonomy.cdm.api.service.IService#update(eu.etaxonomy.cdm.model.common.ICdmBase)
777 public UUID
update(TaxonBase transientObject
) {
778 return defaultTaxonService
.update(transientObject
);
783 * @param includeProperties
787 * @param propertyPaths
789 * @see eu.etaxonomy.cdm.api.service.IService#list(eu.etaxonomy.cdm.model.common.ICdmBase, java.util.Set, java.lang.Integer, java.lang.Integer, java.util.List, java.util.List)
792 public List
<TaxonBase
> list(TaxonBase example
, Set
<String
> includeProperties
, Integer limit
, Integer start
, List
<OrderHint
> orderHints
, List
<String
> propertyPaths
) {
793 return defaultTaxonService
.list(example
, includeProperties
, limit
, start
, orderHints
, propertyPaths
);
797 * @param oldSynonymRelation
799 * @param moveHomotypicGroup
800 * @param newSynonymRelationshipType
801 * @param newReference
802 * @param newReferenceDetail
803 * @param keepReference
805 * @throws HomotypicalGroupChangeException
806 * @see eu.etaxonomy.cdm.api.service.ITaxonService#moveSynonymToAnotherTaxon(eu.etaxonomy.cdm.model.taxon.SynonymRelationship, eu.etaxonomy.cdm.model.taxon.Taxon, boolean, eu.etaxonomy.cdm.model.taxon.SynonymRelationshipType, eu.etaxonomy.cdm.model.reference.Reference, java.lang.String, boolean)
809 public SynonymRelationship
moveSynonymToAnotherTaxon(SynonymRelationship oldSynonymRelation
, Taxon newTaxon
, boolean moveHomotypicGroup
, SynonymRelationshipType newSynonymRelationshipType
, Reference newReference
, String newReferenceDetail
, boolean keepReference
) throws HomotypicalGroupChangeException
{
810 return defaultTaxonService
.moveSynonymToAnotherTaxon(oldSynonymRelation
, newTaxon
, moveHomotypicGroup
, newSynonymRelationshipType
, newReference
, newReferenceDetail
, keepReference
);
815 * @param matchStrategy
816 * @param mergeStrategy
818 * @see eu.etaxonomy.cdm.api.service.IIdentifiableEntityService#deduplicate(java.lang.Class, eu.etaxonomy.cdm.strategy.match.IMatchStrategy, eu.etaxonomy.cdm.strategy.merge.IMergeStrategy)
821 public int deduplicate(Class
<?
extends TaxonBase
> clazz
, IMatchStrategy matchStrategy
, IMergeStrategy mergeStrategy
) {
822 return defaultTaxonService
.deduplicate(clazz
, matchStrategy
, mergeStrategy
);
833 * @see eu.etaxonomy.cdm.api.service.IIdentifiableEntityService#findTitleCache(java.lang.Class, java.lang.String, java.lang.Integer, java.lang.Integer, java.util.List, eu.etaxonomy.cdm.persistence.query.MatchMode)
836 public Pager
<TaxonBase
> findTitleCache(Class
<?
extends TaxonBase
> clazz
, String queryString
, Integer pageSize
, Integer pageNumber
, List
<OrderHint
> orderHints
, MatchMode matchMode
) {
837 return defaultTaxonService
.findTitleCache(clazz
, queryString
, pageSize
, pageNumber
, orderHints
, matchMode
);
846 * @param propertyPaths
848 * @see eu.etaxonomy.cdm.api.service.ITaxonService#listToTaxonRelationships(eu.etaxonomy.cdm.model.taxon.Taxon, eu.etaxonomy.cdm.model.taxon.TaxonRelationshipType, java.lang.Integer, java.lang.Integer, java.util.List, java.util.List)
851 public List
<TaxonRelationship
> listToTaxonRelationships(Taxon taxon
, TaxonRelationshipType type
, Integer pageSize
, Integer pageNumber
, List
<OrderHint
> orderHints
, List
<String
> propertyPaths
) {
852 return defaultTaxonService
.listToTaxonRelationships(taxon
, type
, pageSize
, pageNumber
, orderHints
, propertyPaths
);
861 * @param propertyPaths
863 * @see eu.etaxonomy.cdm.api.service.ITaxonService#pageToTaxonRelationships(eu.etaxonomy.cdm.model.taxon.Taxon, eu.etaxonomy.cdm.model.taxon.TaxonRelationshipType, java.lang.Integer, java.lang.Integer, java.util.List, java.util.List)
866 public Pager
<TaxonRelationship
> pageToTaxonRelationships(Taxon taxon
, TaxonRelationshipType type
, Integer pageSize
, Integer pageNumber
, List
<OrderHint
> orderHints
, List
<String
> propertyPaths
) {
867 return defaultTaxonService
.pageToTaxonRelationships(taxon
, type
, pageSize
, pageNumber
, orderHints
, propertyPaths
);
876 * @param propertyPaths
878 * @see eu.etaxonomy.cdm.api.service.ITaxonService#listFromTaxonRelationships(eu.etaxonomy.cdm.model.taxon.Taxon, eu.etaxonomy.cdm.model.taxon.TaxonRelationshipType, java.lang.Integer, java.lang.Integer, java.util.List, java.util.List)
881 public List
<TaxonRelationship
> listFromTaxonRelationships(Taxon taxon
, TaxonRelationshipType type
, Integer pageSize
, Integer pageNumber
, List
<OrderHint
> orderHints
, List
<String
> propertyPaths
) {
882 return defaultTaxonService
.listFromTaxonRelationships(taxon
, type
, pageSize
, pageNumber
, orderHints
, propertyPaths
);
891 * @param propertyPaths
893 * @see eu.etaxonomy.cdm.api.service.ITaxonService#pageFromTaxonRelationships(eu.etaxonomy.cdm.model.taxon.Taxon, eu.etaxonomy.cdm.model.taxon.TaxonRelationshipType, java.lang.Integer, java.lang.Integer, java.util.List, java.util.List)
896 public Pager
<TaxonRelationship
> pageFromTaxonRelationships(Taxon taxon
, TaxonRelationshipType type
, Integer pageSize
, Integer pageNumber
, List
<OrderHint
> orderHints
, List
<String
> propertyPaths
) {
897 return defaultTaxonService
.pageFromTaxonRelationships(taxon
, type
, pageSize
, pageNumber
, orderHints
, propertyPaths
);
902 * @param includeRelationships
906 * @param propertyPaths
908 * @see eu.etaxonomy.cdm.api.service.ITaxonService#listRelatedTaxa(eu.etaxonomy.cdm.model.taxon.Taxon, java.util.Set, java.lang.Integer, java.lang.Integer, java.lang.Integer, java.util.List)
911 public Set
<Taxon
> listRelatedTaxa(Taxon taxon
, Set
<TaxonRelationshipEdge
> includeRelationships
, Integer maxDepth
, Integer limit
, Integer start
, List
<String
> propertyPaths
) {
912 return defaultTaxonService
.listRelatedTaxa(taxon
, includeRelationships
, maxDepth
, limit
, start
, propertyPaths
);
919 * @param propertyPaths
921 * @see eu.etaxonomy.cdm.api.service.ITaxonService#listClassifications(eu.etaxonomy.cdm.model.taxon.TaxonBase, java.lang.Integer, java.lang.Integer, java.util.List)
924 public List
<Classification
> listClassifications(TaxonBase taxonBase
, Integer limit
, Integer start
, List
<String
> propertyPaths
) {
925 return defaultTaxonService
.listClassifications(taxonBase
, limit
, start
, propertyPaths
);
934 * @param propertyPaths
936 * @see eu.etaxonomy.cdm.api.service.ITaxonService#getSynonyms(eu.etaxonomy.cdm.model.taxon.Synonym, eu.etaxonomy.cdm.model.taxon.SynonymRelationshipType, java.lang.Integer, java.lang.Integer, java.util.List, java.util.List)
939 public Pager
<SynonymRelationship
> getSynonyms(Synonym synonym
, SynonymRelationshipType type
, Integer pageSize
, Integer pageNumber
, List
<OrderHint
> orderHints
, List
<String
> propertyPaths
) {
940 return defaultTaxonService
.getSynonyms(synonym
, type
, pageSize
, pageNumber
, orderHints
, propertyPaths
);
949 * @param propertyPaths
951 * @see eu.etaxonomy.cdm.api.service.ITaxonService#getSynonyms(eu.etaxonomy.cdm.model.taxon.Taxon, eu.etaxonomy.cdm.model.taxon.SynonymRelationshipType, java.lang.Integer, java.lang.Integer, java.util.List, java.util.List)
954 public Pager
<SynonymRelationship
> getSynonyms(Taxon taxon
, SynonymRelationshipType type
, Integer pageSize
, Integer pageNumber
, List
<OrderHint
> orderHints
, List
<String
> propertyPaths
) {
955 return defaultTaxonService
.getSynonyms(taxon
, type
, pageSize
, pageNumber
, orderHints
, propertyPaths
);
960 * @param propertyPaths
962 * @see eu.etaxonomy.cdm.api.service.ITaxonService#getHomotypicSynonymsByHomotypicGroup(eu.etaxonomy.cdm.model.taxon.Taxon, java.util.List)
965 public List
<Synonym
> getHomotypicSynonymsByHomotypicGroup(Taxon taxon
, List
<String
> propertyPaths
) {
966 return defaultTaxonService
.getHomotypicSynonymsByHomotypicGroup(taxon
, propertyPaths
);
971 * @param propertyPaths
973 * @see eu.etaxonomy.cdm.api.service.ITaxonService#getHeterotypicSynonymyGroups(eu.etaxonomy.cdm.model.taxon.Taxon, java.util.List)
976 public List
<List
<Synonym
>> getHeterotypicSynonymyGroups(Taxon taxon
, List
<String
> propertyPaths
) {
977 return defaultTaxonService
.getHeterotypicSynonymyGroups(taxon
, propertyPaths
);
986 * @param propertyPaths
988 * @see eu.etaxonomy.cdm.api.service.ITaxonService#search(java.lang.Class, java.lang.String, java.lang.Integer, java.lang.Integer, java.util.List, java.util.List)
991 public Pager
<TaxonBase
> search(Class
<?
extends TaxonBase
> clazz
, String queryString
, Integer pageSize
, Integer pageNumber
, List
<OrderHint
> orderHints
, List
<String
> propertyPaths
) {
992 return defaultTaxonService
.search(clazz
, queryString
, pageSize
, pageNumber
, orderHints
, propertyPaths
);
998 * @param infragenericEpithet
999 * @param specificEpithet
1000 * @param infraspecificEpithet
1005 * @see eu.etaxonomy.cdm.api.service.ITaxonService#findTaxaByName(java.lang.Class, java.lang.String, java.lang.String, java.lang.String, java.lang.String, eu.etaxonomy.cdm.model.name.Rank, java.lang.Integer, java.lang.Integer)
1008 public Pager
<TaxonBase
> findTaxaByName(Class
<?
extends TaxonBase
> clazz
, String uninomial
, String infragenericEpithet
, String specificEpithet
, String infraspecificEpithet
, Rank rank
, Integer pageSize
, Integer pageNumber
) {
1009 return defaultTaxonService
.findTaxaByName(clazz
, uninomial
, infragenericEpithet
, specificEpithet
, infraspecificEpithet
, rank
, pageSize
, pageNumber
);
1015 * @param infragenericEpithet
1016 * @param specificEpithet
1017 * @param infraspecificEpithet
1022 * @see eu.etaxonomy.cdm.api.service.ITaxonService#listTaxaByName(java.lang.Class, java.lang.String, java.lang.String, java.lang.String, java.lang.String, eu.etaxonomy.cdm.model.name.Rank, java.lang.Integer, java.lang.Integer)
1025 public List
<TaxonBase
> listTaxaByName(Class
<?
extends TaxonBase
> clazz
, String uninomial
, String infragenericEpithet
, String specificEpithet
, String infraspecificEpithet
, Rank rank
, Integer pageSize
, Integer pageNumber
) {
1026 return defaultTaxonService
.listTaxaByName(clazz
, uninomial
, infragenericEpithet
, specificEpithet
, infraspecificEpithet
, rank
, pageSize
, pageNumber
);
1030 * @param configurator
1032 * @see eu.etaxonomy.cdm.api.service.ITaxonService#findTaxaAndNames(eu.etaxonomy.cdm.api.service.config.IFindTaxaAndNamesConfigurator)
1035 public Pager
<IdentifiableEntity
> findTaxaAndNames(IFindTaxaAndNamesConfigurator configurator
) {
1036 return defaultTaxonService
.findTaxaAndNames(configurator
);
1040 * @param queryString
1041 * @param classification
1043 * @param highlightFragments
1047 * @param propertyPaths
1049 * @throws CorruptIndexException
1050 * @throws IOException
1051 * @throws ParseException
1052 * @throws LuceneMultiSearchException
1054 * @see eu.etaxonomy.cdm.api.service.ITaxonService#findByEverythingFullText(java.lang.String, eu.etaxonomy.cdm.model.taxon.Classification, java.util.List, boolean, java.lang.Integer, java.lang.Integer, java.util.List, java.util.List)
1058 public Pager
<SearchResult
<TaxonBase
>> findByEverythingFullText(String queryString
, Classification classification
, List
<Language
> languages
, boolean highlightFragments
, Integer pageSize
, Integer pageNumber
, List
<OrderHint
> orderHints
, List
<String
> propertyPaths
) throws CorruptIndexException
, IOException
, ParseException
, LuceneMultiSearchException
{
1059 return defaultTaxonService
.findByEverythingFullText(queryString
, classification
, languages
, highlightFragments
, pageSize
, pageNumber
, orderHints
, propertyPaths
);
1064 * @param queryString
1065 * @param classification
1067 * @param highlightFragments
1071 * @param propertyPaths
1073 * @throws CorruptIndexException
1074 * @throws IOException
1075 * @throws ParseException
1076 * @see eu.etaxonomy.cdm.api.service.ITaxonService#findByFullText(java.lang.Class, java.lang.String, eu.etaxonomy.cdm.model.taxon.Classification, java.util.List, boolean, java.lang.Integer, java.lang.Integer, java.util.List, java.util.List)
1079 public Pager
<SearchResult
<TaxonBase
>> findByFullText(Class
<?
extends TaxonBase
> clazz
, String queryString
, Classification classification
, List
<Language
> languages
, boolean highlightFragments
, Integer pageSize
, Integer pageNumber
, List
<OrderHint
> orderHints
, List
<String
> propertyPaths
) throws CorruptIndexException
, IOException
, ParseException
{
1080 return defaultTaxonService
.findByFullText(clazz
, queryString
, classification
, languages
, highlightFragments
, pageSize
, pageNumber
, orderHints
, propertyPaths
);
1085 * @param statusFilter
1086 * @param classification
1090 * @param propertyPaths
1092 * @throws IOException
1093 * @throws ParseException
1094 * @see eu.etaxonomy.cdm.api.service.ITaxonService#findByDistribution(java.util.List, java.util.List, eu.etaxonomy.cdm.model.taxon.Classification, java.lang.Integer, java.lang.Integer, java.util.List, java.util.List)
1097 public Pager
<SearchResult
<TaxonBase
>> findByDistribution(List
<NamedArea
> areaFilter
, List
<PresenceAbsenceTermBase
<?
>> statusFilter
, Classification classification
, Integer pageSize
, Integer pageNumber
, List
<OrderHint
> orderHints
, List
<String
> propertyPaths
) throws IOException
, ParseException
{
1098 return defaultTaxonService
.findByDistribution(areaFilter
, statusFilter
, classification
, pageSize
, pageNumber
, orderHints
, propertyPaths
);
1102 * @param searchModes
1103 * @param queryString
1104 * @param classification
1106 * @param distributionStatus
1108 * @param highlightFragments
1112 * @param propertyPaths
1114 * @throws CorruptIndexException
1115 * @throws IOException
1116 * @throws ParseException
1117 * @throws LuceneMultiSearchException
1118 * @see eu.etaxonomy.cdm.api.service.ITaxonService#findTaxaAndNamesByFullText(java.util.EnumSet, java.lang.String, eu.etaxonomy.cdm.model.taxon.Classification, java.util.Set, java.util.Set, java.util.List, boolean, java.lang.Integer, java.lang.Integer, java.util.List, java.util.List)
1121 public Pager
<SearchResult
<TaxonBase
>> findTaxaAndNamesByFullText(EnumSet
<TaxaAndNamesSearchMode
> searchModes
, String queryString
, Classification classification
, Set
<NamedArea
> namedAreas
, Set
<PresenceAbsenceTermBase
<?
>> distributionStatus
, List
<Language
> languages
, boolean highlightFragments
, Integer pageSize
, Integer pageNumber
, List
<OrderHint
> orderHints
, List
<String
> propertyPaths
) throws CorruptIndexException
, IOException
, ParseException
, LuceneMultiSearchException
{
1122 return defaultTaxonService
.findTaxaAndNamesByFullText(searchModes
, queryString
, classification
, namedAreas
, distributionStatus
, languages
, highlightFragments
, pageSize
, pageNumber
, orderHints
, propertyPaths
);
1127 * @param queryString
1128 * @param classification
1131 * @param highlightFragments
1135 * @param propertyPaths
1137 * @throws CorruptIndexException
1138 * @throws IOException
1139 * @throws ParseException
1140 * @see eu.etaxonomy.cdm.api.service.ITaxonService#findByDescriptionElementFullText(java.lang.Class, java.lang.String, eu.etaxonomy.cdm.model.taxon.Classification, java.util.List, java.util.List, boolean, java.lang.Integer, java.lang.Integer, java.util.List, java.util.List)
1143 public Pager
<SearchResult
<TaxonBase
>> findByDescriptionElementFullText(Class
<?
extends DescriptionElementBase
> clazz
, String queryString
, Classification classification
, List
<Feature
> features
, List
<Language
> languages
, boolean highlightFragments
, Integer pageSize
, Integer pageNumber
, List
<OrderHint
> orderHints
, List
<String
> propertyPaths
) throws CorruptIndexException
, IOException
, ParseException
{
1144 return defaultTaxonService
.findByDescriptionElementFullText(clazz
, queryString
, classification
, features
, languages
, highlightFragments
, pageSize
, pageNumber
, orderHints
, propertyPaths
);
1151 * @param widthOrDuration
1155 * @see eu.etaxonomy.cdm.api.service.ITaxonService#getAllMedia(eu.etaxonomy.cdm.model.taxon.Taxon, int, int, int, java.lang.String[])
1159 public List
<MediaRepresentation
> getAllMedia(Taxon taxon
, int size
, int height
, int widthOrDuration
, String
[] mimeTypes
) {
1160 return defaultTaxonService
.getAllMedia(taxon
, size
, height
, widthOrDuration
, mimeTypes
);
1165 * @param includeRelationships
1166 * @param limitToGalleries
1167 * @param propertyPath
1170 * @see eu.etaxonomy.cdm.api.service.ITaxonService#listTaxonDescriptionMedia(eu.etaxonomy.cdm.model.taxon.Taxon, java.util.Set, boolean, java.util.List)
1174 public List
<Media
> listTaxonDescriptionMedia(Taxon taxon
, Set
<TaxonRelationshipEdge
> includeRelationships
, boolean limitToGalleries
, List
<String
> propertyPath
) {
1175 return defaultTaxonService
.listTaxonDescriptionMedia(taxon
, includeRelationships
, limitToGalleries
, propertyPath
);
1180 * @param includeRelationships
1181 * @param limitToGalleries
1182 * @param includeTaxonDescriptions
1183 * @param includeOccurrences
1184 * @param includeTaxonNameDescriptions
1185 * @param propertyPath
1187 * @see eu.etaxonomy.cdm.api.service.ITaxonService#listMedia(eu.etaxonomy.cdm.model.taxon.Taxon, java.util.Set, java.lang.Boolean, java.lang.Boolean, java.lang.Boolean, java.lang.Boolean, java.util.List)
1190 public List
<Media
> listMedia(Taxon taxon
, Set
<TaxonRelationshipEdge
> includeRelationships
, Boolean limitToGalleries
, Boolean includeTaxonDescriptions
, Boolean includeOccurrences
, Boolean includeTaxonNameDescriptions
, List
<String
> propertyPath
) {
1191 return defaultTaxonService
.listMedia(taxon
, includeRelationships
, limitToGalleries
, includeTaxonDescriptions
, includeOccurrences
, includeTaxonNameDescriptions
, propertyPath
);
1197 * @see eu.etaxonomy.cdm.api.service.ITaxonService#findTaxaByID(java.util.Set)
1200 public List
<TaxonBase
> findTaxaByID(Set
<Integer
> listOfIDs
) {
1201 return defaultTaxonService
.findTaxaByID(listOfIDs
);
1206 * @param propertyPaths
1208 * @see eu.etaxonomy.cdm.api.service.ITaxonService#findTaxonByUuid(java.util.UUID, java.util.List)
1211 public TaxonBase
findTaxonByUuid(UUID uuid
, List
<String
> propertyPaths
) {
1212 return defaultTaxonService
.findTaxonByUuid(uuid
, propertyPaths
);
1217 * @see eu.etaxonomy.cdm.api.service.ITaxonService#countAllRelationships()
1220 public int countAllRelationships() {
1221 return defaultTaxonService
.countAllRelationships();
1225 * @param propertyPath
1227 * @see eu.etaxonomy.cdm.api.service.ITaxonService#findIdenticalTaxonNames(java.util.List)
1230 public List
<TaxonNameBase
> findIdenticalTaxonNames(List
<String
> propertyPath
) {
1231 return defaultTaxonService
.findIdenticalTaxonNames(propertyPath
);
1235 * @param propertyPath
1237 * @see eu.etaxonomy.cdm.api.service.ITaxonService#findIdenticalTaxonNameIds(java.util.List)
1240 public List
<TaxonNameBase
> findIdenticalTaxonNameIds(List
<String
> propertyPath
) {
1241 return defaultTaxonService
.findIdenticalTaxonNameIds(propertyPath
);
1247 * @see eu.etaxonomy.cdm.api.service.ITaxonService#getPhylumName(eu.etaxonomy.cdm.model.name.TaxonNameBase)
1250 public String
getPhylumName(TaxonNameBase name
) {
1251 return defaultTaxonService
.getPhylumName(name
);
1257 * @see eu.etaxonomy.cdm.api.service.ITaxonService#deleteSynonymRelationships(eu.etaxonomy.cdm.model.taxon.Synonym)
1260 public long deleteSynonymRelationships(Synonym syn
) {
1261 return defaultTaxonService
.deleteSynonymRelationships(syn
);
1270 * @param propertyPaths
1273 * @see eu.etaxonomy.cdm.api.service.ITaxonService#listSynonymRelationships(eu.etaxonomy.cdm.model.taxon.TaxonBase, eu.etaxonomy.cdm.model.taxon.SynonymRelationshipType, java.lang.Integer, java.lang.Integer, java.util.List, java.util.List, eu.etaxonomy.cdm.model.common.RelationshipBase.Direction)
1276 public List
<SynonymRelationship
> listSynonymRelationships(TaxonBase taxonBase
, SynonymRelationshipType type
, Integer pageSize
, Integer pageNumber
, List
<OrderHint
> orderHints
, List
<String
> propertyPaths
, Direction direction
) {
1277 return defaultTaxonService
.listSynonymRelationships(taxonBase
, type
, pageSize
, pageNumber
, orderHints
, propertyPaths
, direction
);
1283 * @see eu.etaxonomy.cdm.api.service.ITaxonService#findBestMatchingTaxon(java.lang.String)
1286 public Taxon
findBestMatchingTaxon(String taxonName
) {
1287 return defaultTaxonService
.findBestMatchingTaxon(taxonName
);
1293 * @see eu.etaxonomy.cdm.api.service.ITaxonService#findBestMatchingTaxon(eu.etaxonomy.cdm.api.service.config.MatchingTaxonConfigurator)
1296 public Taxon
findBestMatchingTaxon(MatchingTaxonConfigurator config
) {
1297 return defaultTaxonService
.findBestMatchingTaxon(config
);
1303 * @see eu.etaxonomy.cdm.api.service.ITaxonService#findBestMatchingSynonym(java.lang.String)
1306 public Synonym
findBestMatchingSynonym(String taxonName
) {
1307 return defaultTaxonService
.findBestMatchingSynonym(taxonName
);
1312 * @see eu.etaxonomy.cdm.api.service.ITaxonService#getUuidAndTitleCacheTaxon()
1315 public List
<UuidAndTitleCache
<TaxonBase
>> getUuidAndTitleCacheTaxon() {
1316 return defaultTaxonService
.getUuidAndTitleCacheTaxon();
1321 * @see eu.etaxonomy.cdm.api.service.ITaxonService#getUuidAndTitleCacheSynonym()
1324 public List
<UuidAndTitleCache
<TaxonBase
>> getUuidAndTitleCacheSynonym() {
1325 return defaultTaxonService
.getUuidAndTitleCacheSynonym();
1329 * @param configurator
1331 * @see eu.etaxonomy.cdm.api.service.ITaxonService#findTaxaAndNamesForEditor(eu.etaxonomy.cdm.api.service.config.IFindTaxaAndNamesConfigurator)
1334 public List
<UuidAndTitleCache
<TaxonBase
>> findTaxaAndNamesForEditor(IFindTaxaAndNamesConfigurator configurator
) {
1335 return defaultTaxonService
.findTaxaAndNamesForEditor(configurator
);
1342 * @param doWithMisappliedNames
1344 * @see eu.etaxonomy.cdm.api.service.ITaxonService#createInferredSynonyms(eu.etaxonomy.cdm.model.taxon.Taxon, eu.etaxonomy.cdm.model.taxon.Classification, eu.etaxonomy.cdm.model.taxon.SynonymRelationshipType, boolean)
1347 public List
<Synonym
> createInferredSynonyms(Taxon taxon
, Classification tree
, SynonymRelationshipType type
, boolean doWithMisappliedNames
) {
1348 return defaultTaxonService
.createInferredSynonyms(taxon
, tree
, type
, doWithMisappliedNames
);
1354 * @param doWithMisappliedNames
1356 * @see eu.etaxonomy.cdm.api.service.ITaxonService#createAllInferredSynonyms(eu.etaxonomy.cdm.model.taxon.Taxon, eu.etaxonomy.cdm.model.taxon.Classification, boolean)
1359 public List
<Synonym
> createAllInferredSynonyms(Taxon taxon
, Classification tree
, boolean doWithMisappliedNames
) {
1360 return defaultTaxonService
.createAllInferredSynonyms(taxon
, tree
, doWithMisappliedNames
);
1364 * @see eu.etaxonomy.cdm.api.service.ITaxonService#deleteSynonym(eu.etaxonomy.cdm.model.taxon.Synonym, eu.etaxonomy.cdm.api.service.config.SynonymDeletionConfigurator)
1367 public void deleteSynonym(Synonym arg0
, SynonymDeletionConfigurator arg1
) {
1368 defaultTaxonService
.deleteSynonym(arg0
, arg1
);
1372 * @see eu.etaxonomy.cdm.api.service.ITaxonService#deleteSynonym(eu.etaxonomy.cdm.model.taxon.Synonym, eu.etaxonomy.cdm.model.taxon.Taxon, eu.etaxonomy.cdm.api.service.config.SynonymDeletionConfigurator)
1375 public void deleteSynonym(Synonym arg0
, Taxon arg1
, SynonymDeletionConfigurator arg2
) {
1376 defaultTaxonService
.deleteSynonym(arg0
, arg1
, arg2
);
1380 * @see eu.etaxonomy.cdm.api.service.ITaxonService#deleteTaxon(eu.etaxonomy.cdm.model.taxon.Taxon, eu.etaxonomy.cdm.api.service.config.TaxonDeletionConfigurator, eu.etaxonomy.cdm.model.taxon.Classification)
1383 public UUID
deleteTaxon(Taxon arg0
, TaxonDeletionConfigurator arg1
, Classification arg2
)
1384 throws DataChangeNoRollbackException
{
1385 return defaultTaxonService
.deleteTaxon(arg0
, arg1
, arg2
);