eu.etaxonomy.taxeditor.store/src/main/java/eu/etaxonomy/taxeditor/ui/section/occurrence/dna/SingleReadGeneralDetailElement.java

   1 // $Id$
   2 /**
   3  * Copyright (C) 2014 EDIT
   4  * European Distributed Institute of Taxonomy
   5  * http://www.e-taxonomy.eu
   6  *
   7  * The contents of this file are subject to the Mozilla Public License Version 1.1
   8  * See LICENSE.TXT at the top of this package for the full license terms.
   9  */
  10 package eu.etaxonomy.taxeditor.ui.section.occurrence.dna;
  11
  12 import eu.etaxonomy.cdm.model.agent.AgentBase;
  13 import eu.etaxonomy.cdm.model.common.DefinedTerm;
  14 import eu.etaxonomy.cdm.model.molecular.SingleRead;
  15 import eu.etaxonomy.cdm.model.reference.Reference;
  16 import eu.etaxonomy.taxeditor.ui.campanula.compatibility.ICdmFormElement;
  17 import eu.etaxonomy.taxeditor.ui.combo.TermComboElement;
  18 import eu.etaxonomy.taxeditor.ui.element.CdmFormFactory;
  19 import eu.etaxonomy.taxeditor.ui.element.NumberWithLabelElement;
  20 import eu.etaxonomy.taxeditor.ui.element.TextWithLabelElement;
  21 import eu.etaxonomy.taxeditor.ui.element.TimePeriodElement;
  22 import eu.etaxonomy.taxeditor.ui.section.AbstractCdmDetailElement;
  23 import eu.etaxonomy.taxeditor.ui.selection.EntitySelectionElement;
  24
  25 /**
  26  * @author pplitzner
  27  * @date 06.01.2014
  28  *
  29  */
  30 public class SingleReadGeneralDetailElement extends AbstractCdmDetailElement<SingleRead> {
  31
  32
  33     private TimePeriodElement dateElement;
  34     private EntitySelectionElement<AgentBase> selectionSequencingStaff;
  35     private TermComboElement<DefinedTerm> comboMaterialOrMethod;
  36     private TextWithLabelElement textChromatogram;
  37     private NumberWithLabelElement textReadLength;
  38     private TextWithLabelElement textEditedSequence;
  39     private TextWithLabelElement textPrimerName;
  40     private TextWithLabelElement textPrimerSequence;
  41     private EntitySelectionElement<Reference> selectionReference;
  42
  43     /**
  44      * @param formFactory
  45      * @param formElement
  46      */
  47     public SingleReadGeneralDetailElement(CdmFormFactory formFactory, ICdmFormElement formElement) {
  48         super(formFactory, formElement);
  49     }
  50
  51     /*
  52      * (non-Javadoc)
  53      *
  54      * @see
  55      * eu.etaxonomy.taxeditor.section.AbstractCdmDetailElement#createControls
  56      * (eu.etaxonomy.taxeditor.forms.ICdmFormElement, java.lang.Object, int)
  57      */
  58     @Override
  59     protected void createControls(ICdmFormElement formElement, SingleRead entity, int style) {
  60
  61         dateElement = formFactory.createTimePeriodElement(formElement, "Sequencing Date", entity.getDateSequenced(), style);
  62         selectionSequencingStaff = formFactory
  63                 .createSelectionElement(AgentBase.class,
  64                         getConversationHolder(), formElement, "Sequencing Staff",
  65                         null,
  66                         EntitySelectionElement.ALL, style);
  67 //        comboMaterialOrMethod = formFactory.createTermComboElement(DefinedTerm.class, formElement, "Mat. & Meth.", entity.getMaterialOrMethod().getDefinedMaterialOrMethod(), style);
  68         textChromatogram = formFactory.createTextWithLabelElement(formElement, "Read Chromatogram", "XXX", style);
  69 //        textReadLength = formFactory.createNumberTextWithLabelElement(formElement, "Read Length", entity.getSequence().getLength(), style);
  70 //        textEditedSequence = formFactory.createTextWithLabelElement(formElement, "Edited Sequence 5'->3'", entity.getSequenceString(), style);
  71 //        textPrimerName = formFactory.createTextWithLabelElement(formElement, "Primer Name", entity.getPrimer().getLabel(), style);
  72 //        textPrimerSequence = formFactory.createTextWithLabelElement(formElement, "Primer seq. 5'->3'", entity.getPrimer().getSequence().getSequenceString(), style);
  73
  74         selectionReference = formFactory
  75                 .createSelectionElement(Reference.class,
  76                         getConversationHolder(), formElement, "Reference",
  77                         null,
  78                         EntitySelectionElement.ALL, style);
  79     }
  80
  81     /*
  82      * (non-Javadoc)
  83      *
  84      * @see
  85      * eu.etaxonomy.taxeditor.section.AbstractCdmDetailElement#handleEvent(java
  86      * .lang.Object)
  87      */
  88     @Override
  89     public void handleEvent(Object eventSource) {
  90     }
  91
  92 }