eu.etaxonomy.taxeditor.store/src/main/java/eu/etaxonomy/taxeditor/ui/section/occurrence/dna/PrimerGeneralDetailElement.java

   1 // $Id$
   2 /**
   3  * Copyright (C) 2014 EDIT
   4  * European Distributed Institute of Taxonomy
   5  * http://www.e-taxonomy.eu
   6  *
   7  * The contents of this file are subject to the Mozilla Public License Version 1.1
   8  * See LICENSE.TXT at the top of this package for the full license terms.
   9  */
  10 package eu.etaxonomy.taxeditor.ui.section.occurrence.dna;
  11
  12 import eu.etaxonomy.cdm.model.molecular.Primer;
  13 import eu.etaxonomy.cdm.model.molecular.SequenceString;
  14 import eu.etaxonomy.cdm.model.reference.Reference;
  15 import eu.etaxonomy.taxeditor.ui.element.CdmFormFactory;
  16 import eu.etaxonomy.taxeditor.ui.element.ICdmFormElement;
  17 import eu.etaxonomy.taxeditor.ui.element.TextWithLabelElement;
  18 import eu.etaxonomy.taxeditor.ui.section.AbstractCdmDetailElement;
  19 import eu.etaxonomy.taxeditor.ui.selection.EntitySelectionElement;
  20
  21 /**
  22  * @author pplitzner
  23  * @date 06.01.2014
  24  *
  25  */
  26 public class PrimerGeneralDetailElement extends AbstractCdmDetailElement<Primer> {
  27
  28
  29     private TextWithLabelElement textPrimerName;
  30     //TODO we are using a basic text field which is backed up by a Sequence object modelwise.
  31     // This is a bit of a overhead as we may just need the sequence string. This may change in future in both directions:
  32     // either extending this view to support the remaining fields of Sequence or by switching to the more basic SequenceString model element
  33     private TextWithLabelElement textPrimerSequence;
  34     private EntitySelectionElement<Reference> selectionReference;
  35
  36     /**
  37      * @param formFactory
  38      * @param formElement
  39      */
  40     public PrimerGeneralDetailElement(CdmFormFactory formFactory, ICdmFormElement formElement) {
  41         super(formFactory, formElement);
  42     }
  43
  44     /*
  45      * (non-Javadoc)
  46      *
  47      * @see
  48      * eu.etaxonomy.taxeditor.section.AbstractCdmDetailElement#createControls
  49      * (eu.etaxonomy.taxeditor.forms.ICdmFormElement, java.lang.Object, int)
  50      */
  51     @Override
  52     protected void createControls(ICdmFormElement formElement, Primer entity, int style) {
  53         textPrimerName = formFactory.createTextWithLabelElement(formElement, "Primer Name", entity.getLabel(), style);
  54         String sequenceString = "";
  55         if(entity.getSequence()!=null){
  56             sequenceString = entity.getSequence().getString();
  57         }
  58         textPrimerSequence = formFactory.createTextWithLabelElement(formElement, "Primer seq. 5'->3'", sequenceString, style);
  59
  60         selectionReference = formFactory
  61                 .createSelectionElement(Reference.class,
  62                         getConversationHolder(), formElement, "Reference",
  63                         entity.getPublishedIn(),
  64                         EntitySelectionElement.ALL, style);
  65     }
  66
  67     /*
  68      * (non-Javadoc)
  69      *
  70      * @see
  71      * eu.etaxonomy.taxeditor.section.AbstractCdmDetailElement#handleEvent(java
  72      * .lang.Object)
  73      */
  74     @Override
  75     public void handleEvent(Object eventSource) {
  76         if(eventSource==textPrimerName){
  77             getEntity().setLabel(textPrimerName.getText());
  78         }
  79         else if(eventSource==textPrimerSequence){
  80             SequenceString sequenceString = getEntity().getSequence();
  81             if(sequenceString==null){
  82                 sequenceString = SequenceString.NewInstance("");
  83                 getEntity().setSequence(sequenceString);
  84             }
  85             sequenceString.setString(textPrimerSequence.getText());
  86         }
  87         else if(eventSource==selectionReference){
  88             getEntity().setPublishedIn(selectionReference.getSelection());
  89         }
  90     }
  91 }