4 * Copyright (C) 2011 EDIT
5 * European Distributed Institute of Taxonomy
6 * http://www.e-taxonomy.eu
8 * The contents of this file are subject to the Mozilla Public License Version 1.1
9 * See LICENSE.TXT at the top of this package for the full license terms.
12 package eu
.etaxonomy
.taxeditor
.view
.detail
;
16 import org
.eclipse
.jface
.viewers
.ISelection
;
17 import org
.eclipse
.jface
.viewers
.SelectionChangedEvent
;
18 import org
.eclipse
.jface
.viewers
.TreeNode
;
19 import org
.eclipse
.swt
.SWT
;
20 import org
.eclipse
.swt
.widgets
.Composite
;
21 import org
.eclipse
.ui
.forms
.widgets
.ExpandableComposite
;
23 import eu
.etaxonomy
.cdm
.api
.facade
.DerivedUnitFacade
;
24 import eu
.etaxonomy
.cdm
.api
.facade
.DerivedUnitFacadeNotSupportedException
;
25 import eu
.etaxonomy
.cdm
.api
.service
.ITermService
;
26 import eu
.etaxonomy
.cdm
.ext
.occurrence
.gbif
.GbifResponse
;
27 import eu
.etaxonomy
.cdm
.model
.agent
.Person
;
28 import eu
.etaxonomy
.cdm
.model
.agent
.Team
;
29 import eu
.etaxonomy
.cdm
.model
.agent
.TeamOrPersonBase
;
30 import eu
.etaxonomy
.cdm
.model
.common
.DefinedTermBase
;
31 import eu
.etaxonomy
.cdm
.model
.common
.Group
;
32 import eu
.etaxonomy
.cdm
.model
.common
.Marker
;
33 import eu
.etaxonomy
.cdm
.model
.common
.MarkerType
;
34 import eu
.etaxonomy
.cdm
.model
.common
.TermVocabulary
;
35 import eu
.etaxonomy
.cdm
.model
.common
.User
;
36 import eu
.etaxonomy
.cdm
.model
.description
.CategoricalData
;
37 import eu
.etaxonomy
.cdm
.model
.description
.DescriptionBase
;
38 import eu
.etaxonomy
.cdm
.model
.description
.DescriptionElementBase
;
39 import eu
.etaxonomy
.cdm
.model
.description
.PolytomousKeyNode
;
40 import eu
.etaxonomy
.cdm
.model
.description
.SpecimenDescription
;
41 import eu
.etaxonomy
.cdm
.model
.media
.Media
;
42 import eu
.etaxonomy
.cdm
.model
.molecular
.Amplification
;
43 import eu
.etaxonomy
.cdm
.model
.molecular
.DnaSample
;
44 import eu
.etaxonomy
.cdm
.model
.molecular
.Sequence
;
45 import eu
.etaxonomy
.cdm
.model
.molecular
.SingleRead
;
46 import eu
.etaxonomy
.cdm
.model
.name
.NonViralName
;
47 import eu
.etaxonomy
.cdm
.model
.occurrence
.DerivedUnit
;
48 import eu
.etaxonomy
.cdm
.model
.occurrence
.FieldUnit
;
49 import eu
.etaxonomy
.cdm
.model
.occurrence
.MediaSpecimen
;
50 import eu
.etaxonomy
.cdm
.model
.occurrence
.SpecimenOrObservationType
;
51 import eu
.etaxonomy
.cdm
.model
.reference
.Reference
;
52 import eu
.etaxonomy
.cdm
.model
.taxon
.TaxonBase
;
53 import eu
.etaxonomy
.cdm
.model
.taxon
.TaxonRelationship
;
54 import eu
.etaxonomy
.taxeditor
.editor
.UsageTermCollection
;
55 import eu
.etaxonomy
.taxeditor
.model
.FeatureNodeContainer
;
56 import eu
.etaxonomy
.taxeditor
.model
.PolytomousKeyRelationship
;
57 import eu
.etaxonomy
.taxeditor
.preference
.IPreferenceKeys
;
58 import eu
.etaxonomy
.taxeditor
.preference
.PreferencesUtil
;
59 import eu
.etaxonomy
.taxeditor
.store
.CdmStore
;
60 import eu
.etaxonomy
.taxeditor
.ui
.element
.AbstractFormSection
;
61 import eu
.etaxonomy
.taxeditor
.ui
.element
.RootElement
;
62 import eu
.etaxonomy
.taxeditor
.ui
.section
.agent
.PersonDetailSection
;
63 import eu
.etaxonomy
.taxeditor
.ui
.section
.agent
.TeamDetailSection
;
64 import eu
.etaxonomy
.taxeditor
.ui
.section
.agent
.TeamOrPersonBaseDetailSection
;
65 import eu
.etaxonomy
.taxeditor
.ui
.section
.common
.ReferencedEntityDetailSection
;
66 import eu
.etaxonomy
.taxeditor
.ui
.section
.description
.DescribedSpecimenSection
;
67 import eu
.etaxonomy
.taxeditor
.ui
.section
.description
.DescriptionDetailSection
;
68 import eu
.etaxonomy
.taxeditor
.ui
.section
.description
.DescriptionElementDetailSection
;
69 import eu
.etaxonomy
.taxeditor
.ui
.section
.description
.DescriptionElementMediaSection
;
70 import eu
.etaxonomy
.taxeditor
.ui
.section
.description
.DescriptionElementSourceSection
;
71 import eu
.etaxonomy
.taxeditor
.ui
.section
.description
.DescriptionSourceSection
;
72 import eu
.etaxonomy
.taxeditor
.ui
.section
.description
.MediaDetailsSection
;
73 import eu
.etaxonomy
.taxeditor
.ui
.section
.description
.NaturalLanguageSection
;
74 import eu
.etaxonomy
.taxeditor
.ui
.section
.description
.ScopeSection
;
75 import eu
.etaxonomy
.taxeditor
.ui
.section
.feature
.FeatureDistributionDetailSection
;
76 import eu
.etaxonomy
.taxeditor
.ui
.section
.grantedAuthority
.GrantedAuthorityDetailSection
;
77 import eu
.etaxonomy
.taxeditor
.ui
.section
.group
.GroupDetailSection
;
78 import eu
.etaxonomy
.taxeditor
.ui
.section
.group
.MemberDetailSection
;
79 import eu
.etaxonomy
.taxeditor
.ui
.section
.key
.PolytomousKeyDetailSection
;
80 import eu
.etaxonomy
.taxeditor
.ui
.section
.key
.PolytomousKeyNodeDetailSection
;
81 import eu
.etaxonomy
.taxeditor
.ui
.section
.key
.TaxonomicScopeSection
;
82 import eu
.etaxonomy
.taxeditor
.ui
.section
.name
.NameRelationshipDetailSection
;
83 import eu
.etaxonomy
.taxeditor
.ui
.section
.name
.NomenclaturalStatusSection
;
84 import eu
.etaxonomy
.taxeditor
.ui
.section
.name
.NonViralNameDetailSection
;
85 import eu
.etaxonomy
.taxeditor
.ui
.section
.name
.ProtologueSection
;
86 import eu
.etaxonomy
.taxeditor
.ui
.section
.name
.TypeDesignationSection
;
87 import eu
.etaxonomy
.taxeditor
.ui
.section
.occurrence
.DerivedUnitBaseDetailSection
;
88 import eu
.etaxonomy
.taxeditor
.ui
.section
.occurrence
.DerivedUnitGeneralDetailSection
;
89 import eu
.etaxonomy
.taxeditor
.ui
.section
.occurrence
.DeterminationDetailSection
;
90 import eu
.etaxonomy
.taxeditor
.ui
.section
.occurrence
.EmptySection
;
91 import eu
.etaxonomy
.taxeditor
.ui
.section
.occurrence
.FieldUnitDetailSection
;
92 import eu
.etaxonomy
.taxeditor
.ui
.section
.occurrence
.FieldUnitGeneralDetailSection
;
93 import eu
.etaxonomy
.taxeditor
.ui
.section
.occurrence
.GatheringEventDetailSection
;
94 import eu
.etaxonomy
.taxeditor
.ui
.section
.occurrence
.OriginalLabelDataSection
;
95 import eu
.etaxonomy
.taxeditor
.ui
.section
.occurrence
.derivedUnit
.PreservedSpecimenDetailSection
;
96 import eu
.etaxonomy
.taxeditor
.ui
.section
.occurrence
.derivedUnit
.PreservedSpecimenDeterminationDetailSection
;
97 import eu
.etaxonomy
.taxeditor
.ui
.section
.occurrence
.derivedUnit
.PreservedSpecimenGeneralDetailSection
;
98 import eu
.etaxonomy
.taxeditor
.ui
.section
.occurrence
.dna
.AmplificationCloningDetailSection
;
99 import eu
.etaxonomy
.taxeditor
.ui
.section
.occurrence
.dna
.AmplificationGelPhotoCollectionDetailSection
;
100 import eu
.etaxonomy
.taxeditor
.ui
.section
.occurrence
.dna
.AmplificationGeneralDetailSection
;
101 import eu
.etaxonomy
.taxeditor
.ui
.section
.occurrence
.dna
.AmplificationPrimerDetailSection
;
102 import eu
.etaxonomy
.taxeditor
.ui
.section
.occurrence
.dna
.DnaQualityDetailSection
;
103 import eu
.etaxonomy
.taxeditor
.ui
.section
.occurrence
.dna
.DnaSampleGeneralDetailSection
;
104 import eu
.etaxonomy
.taxeditor
.ui
.section
.occurrence
.dna
.SequenceContigFileCollectionDetailSection
;
105 import eu
.etaxonomy
.taxeditor
.ui
.section
.occurrence
.dna
.SequenceGeneralDetailSection
;
106 import eu
.etaxonomy
.taxeditor
.ui
.section
.occurrence
.dna
.SequenceReferenceCollectionDetailSection
;
107 import eu
.etaxonomy
.taxeditor
.ui
.section
.occurrence
.dna
.SingleReadGeneralDetailSection
;
108 import eu
.etaxonomy
.taxeditor
.ui
.section
.occurrence
.dna
.SingleReadPherogramCollectionDetailSection
;
109 import eu
.etaxonomy
.taxeditor
.ui
.section
.occurrence
.dna
.TissueSampleGeneralDetailSection
;
110 import eu
.etaxonomy
.taxeditor
.ui
.section
.occurrence
.media
.LivingPlantPhotoGeneralDetailSection
;
111 import eu
.etaxonomy
.taxeditor
.ui
.section
.occurrence
.media
.MediaSpecimenGeneralDetailSection
;
112 import eu
.etaxonomy
.taxeditor
.ui
.section
.occurrence
.media
.SpecimenScanGeneralDetailSection
;
113 import eu
.etaxonomy
.taxeditor
.ui
.section
.reference
.NomenclaturalReferenceDetailSection
;
114 import eu
.etaxonomy
.taxeditor
.ui
.section
.reference
.ReferenceDetailSection
;
115 import eu
.etaxonomy
.taxeditor
.ui
.section
.taxon
.ParsingMessagesSection
;
116 import eu
.etaxonomy
.taxeditor
.ui
.section
.taxon
.TaxonBaseDetailSection
;
117 import eu
.etaxonomy
.taxeditor
.ui
.section
.taxon
.TaxonRelationshipDetailSection
;
118 import eu
.etaxonomy
.taxeditor
.ui
.section
.user
.GroupsByUserDetailSection
;
119 import eu
.etaxonomy
.taxeditor
.ui
.section
.user
.UserDetailSection
;
120 import eu
.etaxonomy
.taxeditor
.ui
.section
.userecords
.UseRecordDetailSection
;
121 import eu
.etaxonomy
.taxeditor
.ui
.section
.vocabulary
.TermVocabularyDetailSection
;
122 import eu
.etaxonomy
.taxeditor
.view
.AbstractCdmDataViewer
;
123 import eu
.etaxonomy
.taxeditor
.view
.AbstractCdmViewPart
;
127 * The DetailsViewer handles the content of the details view (
128 * {@link DetailsViewPart}).<br>
129 * Depending on the type of the selected element the section of the details view
133 * @created Feb 12, 2010
136 public class DetailsViewer
extends AbstractCdmDataViewer
{
138 private ISelection selection
;
142 * Constructor for DetailsViewer.
146 * a {@link org.eclipse.swt.widgets.Composite} object.
148 * a {@link eu.etaxonomy.taxeditor.view.AbstractCdmViewPart}
151 public DetailsViewer(Composite parent
, AbstractCdmViewPart viewPart
) {
152 super(parent
, viewPart
);
155 // START HACK TO MAKE THE DERIVED UNIT FACADE WORK
156 // since we are getting implementations of DerivedUnitBase from the bulk
158 // and not derived unit facade objects,
164 * eu.etaxonomy.taxeditor.editor.view.AbstractCdmDataViewer#setInput(java
168 public void setInput(Object input
) {
169 if(input
instanceof TreeNode
){
170 input
= ((TreeNode
) input
).getValue();
172 if(input
instanceof GbifResponse
){
173 input
= ((GbifResponse
) input
).getDerivedUnitFacade();
175 if (input
.getClass().equals(DerivedUnit
.class)) {
176 DerivedUnit derivedUnit
= (DerivedUnit
)input
;
178 input
= DerivedUnitFacade
.NewInstance(derivedUnit
,
179 PreferencesUtil
.getDerivedUnitConfigurator());
180 } catch (DerivedUnitFacadeNotSupportedException e
) {
181 // MessagingUtils.error(getClass(), e); //nothing should happen, later on the Details View will show an according information that it is not possible to open this data
184 else if(input
instanceof FieldUnit
){
185 input
= DerivedUnitFacade
.NewInstance(SpecimenOrObservationType
.FieldUnit
, (FieldUnit
) input
);
187 super.setInput(input
);
191 protected void markViewPartDirty() {
192 if (getInput() instanceof DerivedUnitFacade
) {
193 DerivedUnitFacade facade
= (DerivedUnitFacade
) getInput();
194 if(facade
.innerDerivedUnit()!=null){
195 getViewPart().changed(facade
.innerDerivedUnit());
197 else if(facade
.innerFieldUnit()!=null){
198 getViewPart().changed(facade
.innerFieldUnit());
202 super.markViewPartDirty();
206 // END HACK TO MAKE THE DERIVED UNIT FACADE WORK
211 * @see org.eclipse.jface.viewers.Viewer#refresh()
215 protected void showParts() {
216 // FIXME (CM) : Need to clean out this code.
217 // Too much type checking to decide which detail view to display.
218 // Need to build in a mechanism where navigators / editors are 'aware'
219 // of the corresponding detail viewer.
220 Object input
= getInput();
223 if (input
instanceof TaxonBase
) {
224 createTaxonSections(rootElement
);
226 } else if (input
instanceof NonViralName
) {
227 createNameSections(rootElement
);
229 } else if (input
instanceof Reference
) {
230 createReferenceSections(rootElement
);
232 } else if (input
instanceof Team
) {
233 createTeamDetailSection(rootElement
);
235 } else if (input
instanceof Person
) {
236 createPersonDetailSection(rootElement
);
238 } else if (input
instanceof TeamOrPersonBase
) {
239 createTeamOrPersonBaseDetailSection(rootElement
);
241 } else if (input
instanceof DescriptionBase
) {
242 if(input
instanceof SpecimenDescription
){
243 //TODO: add more sections to DetailsView for SpecimenDescription
244 createSpecimenDescriptionSection(rootElement
);
247 Set
<Marker
> descriptionMarkers
= ((DescriptionBase
) input
).getMarkers();
248 MarkerType useMarkertype
= (MarkerType
) CdmStore
.getService(ITermService
.class).find(
249 UsageTermCollection
.uuidUseMarkerType
);
250 Boolean isUseDescription
= false;
251 for (Marker marker
: descriptionMarkers
) {
252 if (marker
.getMarkerType().equals(useMarkertype
)) {
253 isUseDescription
= true;
256 if (((DescriptionBase
) input
).isImageGallery()) {
257 createImageGallerySection(rootElement
);
259 } else if (isUseDescription
) {
260 createUseDescriptionSection(rootElement
);
262 createDescriptionSection(rootElement
);
266 } else if (input
instanceof DescriptionElementBase
) {
267 Set
<Marker
> descriptionMarkers
= ((DescriptionElementBase
) input
).getInDescription().getMarkers();
268 MarkerType useMarkertype
= (MarkerType
) CdmStore
.getService(ITermService
.class).find(
269 UsageTermCollection
.uuidUseMarkerType
);
270 Boolean isUseDescription
= false;
271 for (Marker marker
: descriptionMarkers
) {
272 if (marker
.getMarkerType().equals(useMarkertype
)) {
273 isUseDescription
= true;
277 if (isUseDescription
== true && input
instanceof CategoricalData
) {
278 createUseRecordSection(rootElement
);
280 createDescriptionElementSection(rootElement
);
283 } else if (input
instanceof Media
) {
284 createMediaElementSection(rootElement
);
286 } else if (input
instanceof DerivedUnitFacade
) {
287 if(((DerivedUnitFacade
) input
).getType()==SpecimenOrObservationType
.FieldUnit
){
288 createFieldUnitSection(rootElement
);
290 else if(((DerivedUnitFacade
) input
).getType()==SpecimenOrObservationType
.PreservedSpecimen
){
291 createDerivedUnitBaseElementSection(rootElement
);
293 else if(((DerivedUnitFacade
) input
).getType()==SpecimenOrObservationType
.TissueSample
){
294 createTissueSampleSection(rootElement
);
296 else if(((DerivedUnitFacade
) input
).getType()==SpecimenOrObservationType
.StillImage
){
297 createSpecimenScanSection(rootElement
);
299 else if(((DerivedUnitFacade
) input
).getType()==SpecimenOrObservationType
.StillImage
){
300 createLivingPlantPhotoSection(rootElement
);
302 else if(((DerivedUnitFacade
) input
).getType()==SpecimenOrObservationType
.StillImage
){
303 createMediaSpecimenSection(rootElement
);
306 createDerivedUnitBaseElementSection(rootElement
);
308 } else if (input
instanceof DnaSample
){
309 createDnaSampleSection(rootElement
);
310 } else if (input
instanceof MediaSpecimen
){
311 createMediaSpecimenSection(rootElement
);
313 else if(input
instanceof Amplification
){
314 createAmplificationSection(rootElement
);
316 else if(input
instanceof Sequence
){
317 createSequenceSection(rootElement
);
319 else if(input
instanceof SingleRead
){
320 createSingleReadSection(rootElement
);
322 else if (input
instanceof FeatureNodeContainer
) {
323 createFeatureDistributionSection(rootElement
);
325 }else if ((input
instanceof PolytomousKeyNode
) || (input
instanceof PolytomousKeyRelationship
)) {
326 createPolytomousKeyNodeSection(rootElement
);
327 } else if (input
instanceof User
) {
328 createUserSection(rootElement
);
329 } else if (input
instanceof Group
) {
330 createGroupSection(rootElement
);
331 } else if (input
instanceof TaxonRelationship
) {
332 createTaxonRelationshipSection(rootElement
);
333 } else if (input
instanceof TermVocabulary
) {
334 createTermVocabularySection(rootElement
);
335 } else if (input
instanceof DefinedTermBase
) {
336 createDefinedTermSection(rootElement
);
339 createEmptySection(rootElement
);
348 private void createEmptySection(RootElement parent
) {
351 EmptySection emptySection
= formFactory
.createEmptySection(formFactory
, parent
, SWT
.NONE
);
353 addPart(emptySection
);
359 private void createGroupSection(RootElement parent
) {
362 GroupDetailSection groupDetailSection
= formFactory
.createGroupDetailSection(getConversationHolder(), parent
, this, ExpandableComposite
.TWISTIE
| ExpandableComposite
.EXPANDED
);
363 MemberDetailSection memberDetailSection
= formFactory
.createMemberDetailSection(getConversationHolder(), parent
, ExpandableComposite
.TWISTIE
| ExpandableComposite
.EXPANDED
);
364 GrantedAuthorityDetailSection grantedAuthorityDetailSection
= formFactory
.createGrantedAuthorityDetailSection(getConversationHolder(), parent
,ExpandableComposite
.TWISTIE
| ExpandableComposite
.EXPANDED
);
366 addPart(groupDetailSection
);
367 addPart(memberDetailSection
);
368 addPart(grantedAuthorityDetailSection
);
374 * @see org.eclipse.jface.viewers.Viewer#getSelection()
378 public ISelection
getSelection() {
386 * org.eclipse.jface.viewers.Viewer#setSelection(org.eclipse.jface.viewers
387 * .ISelection, boolean)
391 public void setSelection(ISelection selection
, boolean reveal
) {
392 this.selection
= selection
;
393 if(this.selection
!=null){
394 SelectionChangedEvent selectionChangedEvent
= new SelectionChangedEvent(this, selection
);
395 fireSelectionChanged(selectionChangedEvent
);
400 * createTaxonSections(RootElement parent)
404 private void createTaxonSections(RootElement parent
) {
407 ParsingMessagesSection parsingMessagesSection
= formFactory
.createParsingMessagesSection(getConversationHolder(), parent
, this,
408 ExpandableComposite
.EXPANDED
| ExpandableComposite
.EXPANDED
);
410 TaxonBaseDetailSection taxonBaseDetailSection
= formFactory
.createTaxonBaseDetailSection(getConversationHolder(), parent
, this,
411 ExpandableComposite
.TWISTIE
| ExpandableComposite
.EXPANDED
);
412 formFactory
.createHorizontalSeparator(parent
, SWT
.BORDER
);
414 NonViralNameDetailSection nonViralNameSection
= formFactory
.createNonViralNameDetailSection(getConversationHolder(), parent
, this,
415 ExpandableComposite
.TWISTIE
| ExpandableComposite
.EXPANDED
);
416 formFactory
.createHorizontalSeparator(parent
, SWT
.BORDER
);
418 NomenclaturalReferenceDetailSection referenceDetailSection
= formFactory
.createNomenclaturalReferenceDetailSection(getConversationHolder(), parent
, this,
419 ExpandableComposite
.TWISTIE
| ExpandableComposite
.EXPANDED
);
420 formFactory
.createHorizontalSeparator(parent
, SWT
.BORDER
);
422 NomenclaturalStatusSection nomenclaturalStatusSection
= formFactory
.createNomenclaturalStatusSection(getConversationHolder(), parent
,
423 ExpandableComposite
.TWISTIE
| ExpandableComposite
.EXPANDED
);
424 formFactory
.createHorizontalSeparator(parent
, SWT
.BORDER
);
427 if(!PreferencesUtil
.getPreferenceStore().getBoolean(IPreferenceKeys
.IS_RL
)){
428 ProtologueSection protologSection
= formFactory
.createProtologueSection(getConversationHolder(), parent
, ExpandableComposite
.TWISTIE
);
429 formFactory
.createHorizontalSeparator(parent
, SWT
.BORDER
);
431 TypeDesignationSection typeDesignationSection
= formFactory
.createTypeDesignationSection(getConversationHolder(), parent
, ExpandableComposite
.TWISTIE
);
432 formFactory
.createHorizontalSeparator(parent
, SWT
.BORDER
);
434 NameRelationshipDetailSection nameRelationshipSection
= formFactory
.createNameRelationshipDetailSection(getConversationHolder(), parent
, ExpandableComposite
.TWISTIE
);
435 formFactory
.createHorizontalSeparator(parent
, SWT
.BORDER
);
437 addPart(protologSection
);
438 addPart(typeDesignationSection
);
439 addPart(nameRelationshipSection
);
443 addPart(parsingMessagesSection
);
444 addPart(taxonBaseDetailSection
);
445 addPart(nonViralNameSection
);
446 addPart(nomenclaturalStatusSection
);
447 addPart(referenceDetailSection
);
455 private void createNameSections(RootElement parent
) {
457 NonViralNameDetailSection nonViralNameSection
= formFactory
.createNonViralNameDetailSection(getConversationHolder(), parent
, this,
458 ExpandableComposite
.TWISTIE
| ExpandableComposite
.EXPANDED
);
459 formFactory
.createHorizontalSeparator(parent
, SWT
.BORDER
);
461 NomenclaturalReferenceDetailSection referenceDetailSection
= formFactory
.createNomenclaturalReferenceDetailSection(getConversationHolder(), parent
, this,
462 ExpandableComposite
.TWISTIE
| ExpandableComposite
.EXPANDED
);
463 formFactory
.createHorizontalSeparator(parent
, SWT
.BORDER
);
465 NomenclaturalStatusSection nomenclaturalStatusSection
= formFactory
.createNomenclaturalStatusSection(getConversationHolder(), parent
,
466 ExpandableComposite
.TWISTIE
| ExpandableComposite
.EXPANDED
);
467 formFactory
.createHorizontalSeparator(parent
, SWT
.BORDER
);
469 addPart(nonViralNameSection
);
470 addPart(nomenclaturalStatusSection
);
471 addPart(referenceDetailSection
);
473 if(!PreferencesUtil
.getPreferenceStore().getBoolean(IPreferenceKeys
.IS_RL
)){
474 ProtologueSection protologSection
= formFactory
.createProtologueSection(getConversationHolder(), parent
, ExpandableComposite
.TWISTIE
);
475 formFactory
.createHorizontalSeparator(parent
, SWT
.BORDER
);
477 TypeDesignationSection typeDesignationSection
= formFactory
.createTypeDesignationSection(getConversationHolder(), parent
, ExpandableComposite
.TWISTIE
);
478 formFactory
.createHorizontalSeparator(parent
, SWT
.BORDER
);
480 NameRelationshipDetailSection nameRelationshipSection
= formFactory
.createNameRelationshipDetailSection(getConversationHolder(), parent
, ExpandableComposite
.TWISTIE
);
481 formFactory
.createHorizontalSeparator(parent
, SWT
.BORDER
);
482 addPart(protologSection
);
483 addPart(typeDesignationSection
);
484 addPart(nameRelationshipSection
);
489 * createReferenceSections
493 private void createReferenceSections(RootElement parent
) {
496 ReferenceDetailSection referenceDetailSection
= formFactory
.createReferenceDetailSection(getConversationHolder(), parent
, this,
497 ExpandableComposite
.TWISTIE
| ExpandableComposite
.EXPANDED
);
499 addPart(referenceDetailSection
);
503 * createTeamOrPersonBaseDetailSection
507 private void createTeamOrPersonBaseDetailSection(RootElement parent
) {
509 TeamOrPersonBaseDetailSection teamOrPersonBaseDetailSection
= formFactory
.createTeamOrPersonBaseDetailSection(getConversationHolder(), parent
, this, ExpandableComposite
.TWISTIE
| ExpandableComposite
.EXPANDED
);
511 addPart(teamOrPersonBaseDetailSection
);
515 * createTeamDetailSection
519 private void createTeamDetailSection(RootElement parent
) {
521 TeamDetailSection teamDetailSection
= formFactory
.createTeamDetailSection(getConversationHolder(), parent
, ExpandableComposite
.TWISTIE
| ExpandableComposite
.EXPANDED
);
523 addPart(teamDetailSection
);
527 * createPersonDetailSection
531 private void createPersonDetailSection(RootElement parent
) {
533 PersonDetailSection personDetailSection
= formFactory
.createPersonDetailSection(getConversationHolder(), parent
, ExpandableComposite
.TWISTIE
| ExpandableComposite
.EXPANDED
);
534 addPart(personDetailSection
);
538 * createDescriptionElementSection
542 private void createDescriptionElementSection(RootElement parent
) {
545 DescriptionElementDetailSection descriptionElementDetailSection
= formFactory
.createDescriptionElementDetailSection(getConversationHolder(), parent
, this, ExpandableComposite
.TWISTIE
| ExpandableComposite
.EXPANDED
);
547 formFactory
.createHorizontalSeparator(parent
, SWT
.BORDER
);
549 DescriptionElementSourceSection descriptionElementSourceSection
= formFactory
.createDescriptionElementSourceSection(getConversationHolder(), parent
, ExpandableComposite
.TWISTIE
);
551 formFactory
.createHorizontalSeparator(parent
, SWT
.BORDER
);
553 DescriptionElementMediaSection descriptionElementMediaSection
= formFactory
.createDescriptionElementMediaSection(getConversationHolder(), parent
, ExpandableComposite
.TWISTIE
);
555 formFactory
.createHorizontalSeparator(parent
, SWT
.BORDER
);
557 addPart(descriptionElementDetailSection
);
558 addPart(descriptionElementSourceSection
);
559 addPart(descriptionElementMediaSection
);
563 * createDescriptionSection
567 private void createDescriptionSection(RootElement parent
) {
569 DescriptionDetailSection descriptionDetailSection
= formFactory
.createDescriptionDetailSection(getConversationHolder(), parent
, this, ExpandableComposite
.TWISTIE
| ExpandableComposite
.EXPANDED
);
571 formFactory
.createHorizontalSeparator(parent
, SWT
.BORDER
);
573 NaturalLanguageSection naturalLanguageSection
= formFactory
.createNaturalLanguageSection(getConversationHolder(), parent
, this, ExpandableComposite
.TWISTIE
| ExpandableComposite
.EXPANDED
);
575 formFactory
.createHorizontalSeparator(parent
, SWT
.BORDER
);
577 DescribedSpecimenSection describedSpecimenSection
= formFactory
.createDescribedSpecimenSection(getConversationHolder(), parent
, ExpandableComposite
.TWISTIE
);
579 formFactory
.createHorizontalSeparator(parent
, SWT
.BORDER
);
581 // DescriptionSourceSection descriptionSourceSection = (DescriptionSourceSection) formFactory
582 // .createEntityDetailSection(EntityDetailType.DESCRIPTIONSOURCE,
583 // getConversationHolder(), parent, Section.TWISTIE);
585 // formFactory.createHorizontalSeparator(parent, SWT.BORDER);
587 ScopeSection scopeSection
= formFactory
.createScopeSection(getConversationHolder(), parent
, ExpandableComposite
.TWISTIE
);
589 formFactory
.createHorizontalSeparator(parent
, SWT
.BORDER
);
591 addPart(descriptionDetailSection
);
592 addPart(naturalLanguageSection
);
593 addPart(describedSpecimenSection
);
594 // addPart(descriptionSourceSection);
595 addPart(scopeSection
);
599 * createDescriptionSection
603 private void createSpecimenDescriptionSection(RootElement parent
) {
605 DescriptionDetailSection descriptionDetailSection
= formFactory
.createDescriptionDetailSection(getConversationHolder(), parent
, this, ExpandableComposite
.TWISTIE
| ExpandableComposite
.EXPANDED
);
606 addPart(descriptionDetailSection
);
610 * Creates the use Description section
614 private void createUseDescriptionSection(RootElement parent
) {
616 DescriptionDetailSection descriptionDetailSection
= formFactory
.createDescriptionDetailSection(getConversationHolder(), parent
, this, ExpandableComposite
.TWISTIE
| ExpandableComposite
.EXPANDED
);
618 formFactory
.createHorizontalSeparator(parent
, SWT
.BORDER
);
620 DescriptionSourceSection descriptionSourceSection
= formFactory
.createDescriptionSourceSection(getConversationHolder(), parent
, ExpandableComposite
.TWISTIE
| ExpandableComposite
.EXPANDED
);
622 formFactory
.createHorizontalSeparator(parent
, SWT
.BORDER
);
624 addPart(descriptionDetailSection
);
625 addPart(descriptionSourceSection
);
633 private void createImageGallerySection(RootElement parent
) {
635 DescriptionDetailSection descriptionDetailSection
= formFactory
.createDescriptionDetailSection(getConversationHolder(), parent
, this, ExpandableComposite
.TWISTIE
| ExpandableComposite
.EXPANDED
);
637 addPart(descriptionDetailSection
);
641 * createMediaElementSection
646 private void createMediaElementSection(RootElement parent
) {
649 MediaDetailsSection mediaDetailSection
= formFactory
.createMediaDetailsSection(getConversationHolder(), parent
, this, ExpandableComposite
.TWISTIE
| ExpandableComposite
.EXPANDED
);
651 addPart(mediaDetailSection
);
655 * createDerivedUnitBaseElementSection
659 private void createDerivedUnitBaseElementSection(RootElement parent
) {
662 //different order of sections (Specimen Details as second section and expanded)
663 if(PreferencesUtil
.getPreferenceStore().getBoolean(IPreferenceKeys
.DETERMINATION_ONLY_FOR_FIELD_UNITS
)){
664 DerivedUnitGeneralDetailSection derivedUnitGeneralDetailSection
= formFactory
.createDerivedUnitGeneralDetailSection(getConversationHolder(), parent
, this, ExpandableComposite
.TWISTIE
| ExpandableComposite
.EXPANDED
);
665 addPart(derivedUnitGeneralDetailSection
);
667 formFactory
.createHorizontalSeparator(parent
, SWT
.BORDER
);
669 DerivedUnitBaseDetailSection derivedUnitBaseDetailSection
= formFactory
.createDerivedUnitBaseDetailSection(getConversationHolder(), parent
, this, ExpandableComposite
.TWISTIE
| ExpandableComposite
.EXPANDED
);
670 addPart(derivedUnitBaseDetailSection
);
672 formFactory
.createHorizontalSeparator(parent
, SWT
.BORDER
);
674 OriginalLabelDataSection originalLabelDataSection
= formFactory
.createOriginalLabelDataSection(getConversationHolder(), parent
, this, ExpandableComposite
.TWISTIE
);
675 addPart(originalLabelDataSection
);
677 formFactory
.createHorizontalSeparator(parent
, SWT
.BORDER
);
679 GatheringEventDetailSection gatheringEventDetailSection
= formFactory
.createGatheringEventDetailSection(getConversationHolder(), parent
, this, ExpandableComposite
.TWISTIE
);
680 addPart(gatheringEventDetailSection
);
682 formFactory
.createHorizontalSeparator(parent
, SWT
.BORDER
);
684 FieldUnitDetailSection fieldUnitDetailSection
= formFactory
.createFieldUnitDetailSection(getConversationHolder(), parent
, this, ExpandableComposite
.TWISTIE
);
685 addPart(fieldUnitDetailSection
);
688 DerivedUnitGeneralDetailSection derivedUnitGeneralDetailSection
= formFactory
.createDerivedUnitGeneralDetailSection(getConversationHolder(), parent
, this, ExpandableComposite
.TWISTIE
| ExpandableComposite
.EXPANDED
);
689 addPart(derivedUnitGeneralDetailSection
);
691 formFactory
.createHorizontalSeparator(parent
, SWT
.BORDER
);
693 GatheringEventDetailSection gatheringEventDetailSection
= formFactory
.createGatheringEventDetailSection(getConversationHolder(), parent
, this, ExpandableComposite
.TWISTIE
);
694 addPart(gatheringEventDetailSection
);
696 formFactory
.createHorizontalSeparator(parent
, SWT
.BORDER
);
698 FieldUnitDetailSection fieldUnitDetailSection
= formFactory
.createFieldUnitDetailSection(getConversationHolder(), parent
, this, ExpandableComposite
.TWISTIE
);
699 addPart(fieldUnitDetailSection
);
701 formFactory
.createHorizontalSeparator(parent
, SWT
.BORDER
);
703 DerivedUnitBaseDetailSection derivedUnitBaseDetailSection
= formFactory
.createDerivedUnitBaseDetailSection(getConversationHolder(), parent
, this, ExpandableComposite
.TWISTIE
);
704 addPart(derivedUnitBaseDetailSection
);
706 formFactory
.createHorizontalSeparator(parent
, SWT
.BORDER
);
708 DeterminationDetailSection determinationDetailSection
= formFactory
.createDeterminationDetailSection(getConversationHolder(), parent
, this, ExpandableComposite
.TWISTIE
);
709 addPart(determinationDetailSection
);
714 private void createFieldUnitSection(RootElement parent
) {
717 FieldUnitGeneralDetailSection fielUnitGeneralDetailSection
= formFactory
.createFieldUnitGeneralDetailSection(getConversationHolder(), parent
, this, ExpandableComposite
.TWISTIE
| ExpandableComposite
.EXPANDED
);
719 formFactory
.createHorizontalSeparator(parent
, SWT
.BORDER
);
721 GatheringEventDetailSection gatheringEventDetailSection
= formFactory
.createGatheringEventDetailSection(getConversationHolder(), parent
, this, ExpandableComposite
.TWISTIE
);
723 formFactory
.createHorizontalSeparator(parent
, SWT
.BORDER
);
725 FieldUnitDetailSection fieldUnitDetailSection
= formFactory
.createFieldUnitDetailSection(getConversationHolder(), parent
, this, ExpandableComposite
.TWISTIE
);
727 addPart(fielUnitGeneralDetailSection
);
728 addPart(gatheringEventDetailSection
);
729 addPart(fieldUnitDetailSection
);
731 if(PreferencesUtil
.getPreferenceStore().getBoolean(IPreferenceKeys
.DETERMINATION_ONLY_FOR_FIELD_UNITS
)){
732 formFactory
.createHorizontalSeparator(parent
, SWT
.BORDER
);
733 DeterminationDetailSection determinationDetailSection
= formFactory
.createDeterminationDetailSection(getConversationHolder(), parent
, this, ExpandableComposite
.TWISTIE
);
734 addPart(determinationDetailSection
);
738 private void createPreservedSpecimenSpecimenSection(RootElement parent
) {
741 PreservedSpecimenGeneralDetailSection section
= formFactory
.createPreservedSpecimenGeneralDetailSection(getConversationHolder(), parent
, this, ExpandableComposite
.TWISTIE
| ExpandableComposite
.EXPANDED
);
743 formFactory
.createHorizontalSeparator(parent
, SWT
.BORDER
);
745 PreservedSpecimenDetailSection derivedUnitBaseDetailSection
= formFactory
.createPreservedSpecimenDetailsSection(getConversationHolder(), parent
, this, ExpandableComposite
.TWISTIE
);
747 formFactory
.createHorizontalSeparator(parent
, SWT
.BORDER
);
749 PreservedSpecimenDeterminationDetailSection determinationDetailSection
= formFactory
.createPreservedSpecimenDeterminationDetailSection(getConversationHolder(), parent
, this, ExpandableComposite
.TWISTIE
);
752 addPart(derivedUnitBaseDetailSection
);
753 addPart(determinationDetailSection
);
756 private void createTissueSampleSection(RootElement parent
) {
759 TissueSampleGeneralDetailSection section
= formFactory
.createTissueSampleGeneralDetailSection(getConversationHolder(), parent
, this, ExpandableComposite
.TWISTIE
| ExpandableComposite
.EXPANDED
);
764 private void createDnaSampleSection(RootElement parent
) {
767 DnaSampleGeneralDetailSection section
= formFactory
.createDnaSampleGeneralDetailSection(getConversationHolder(), parent
, this, ExpandableComposite
.TWISTIE
| ExpandableComposite
.EXPANDED
);
769 formFactory
.createHorizontalSeparator(parent
, SWT
.BORDER
);
771 DnaQualityDetailSection qualitySection
= formFactory
.createDnaQualityDetailSection(getConversationHolder(), parent
, this, ExpandableComposite
.TWISTIE
| ExpandableComposite
.EXPANDED
);
774 addPart(qualitySection
);
777 private void createAmplificationSection(RootElement parent
) {
779 AmplificationGeneralDetailSection generalSection
= formFactory
.createAmplificationGeneralDetailSection(getConversationHolder(), parent
, this, ExpandableComposite
.TWISTIE
| ExpandableComposite
.EXPANDED
);
781 formFactory
.createHorizontalSeparator(parent
, SWT
.BORDER
);
783 AmplificationPrimerDetailSection primerSection
= formFactory
.createAmplificationPrimerDetailSection(getConversationHolder(), parent
, this, ExpandableComposite
.TWISTIE
| ExpandableComposite
.EXPANDED
);
785 formFactory
.createHorizontalSeparator(parent
, SWT
.BORDER
);
787 AmplificationCloningDetailSection cloningSection
= formFactory
.createAmplificationCloningDetailSection(getConversationHolder(), parent
, this, ExpandableComposite
.TWISTIE
| ExpandableComposite
.EXPANDED
);
789 formFactory
.createHorizontalSeparator(parent
, SWT
.BORDER
);
791 AmplificationGelPhotoCollectionDetailSection gelPhotoSection
= formFactory
.createAmplificationGelPhotoCollectionDetailSection(getConversationHolder(), parent
, ExpandableComposite
.TWISTIE
| ExpandableComposite
.EXPANDED
);
794 addPart(generalSection
);
795 addPart(primerSection
);
796 addPart(cloningSection
);
797 addPart(gelPhotoSection
);
800 private void createSequenceSection(RootElement parent
) {
803 SequenceGeneralDetailSection section
= formFactory
.createSequenceGeneralDetailSection(getConversationHolder(), parent
, this, ExpandableComposite
.TWISTIE
| ExpandableComposite
.EXPANDED
);
805 formFactory
.createHorizontalSeparator(parent
, SWT
.BORDER
);
807 SequenceReferenceCollectionDetailSection referenceSection
= formFactory
.createSequenceReferenceCollectionDetailSection(getConversationHolder(), parent
, ExpandableComposite
.TWISTIE
| ExpandableComposite
.EXPANDED
);
809 formFactory
.createHorizontalSeparator(parent
, SWT
.BORDER
);
811 SequenceContigFileCollectionDetailSection contigFileSection
= formFactory
.createSequenceContigFileCollectionDetailSection(getConversationHolder(), parent
, ExpandableComposite
.TWISTIE
| ExpandableComposite
.EXPANDED
);
815 addPart(referenceSection
);
816 addPart(contigFileSection
);
819 private void createSingleReadSection(RootElement parent
) {
822 SingleReadGeneralDetailSection section
= formFactory
.createSingleReadGeneralDetailSection(getConversationHolder(), parent
, this, ExpandableComposite
.TWISTIE
| ExpandableComposite
.EXPANDED
);
824 formFactory
.createHorizontalSeparator(parent
, SWT
.BORDER
);
826 SingleReadPherogramCollectionDetailSection pherogramSection
= formFactory
.createSingleReadPherogramCollectionDetailSection(getConversationHolder(), parent
, ExpandableComposite
.TWISTIE
| ExpandableComposite
.EXPANDED
);
829 addPart(pherogramSection
);
832 private void createSpecimenScanSection(RootElement parent
) {
834 SpecimenScanGeneralDetailSection section
= formFactory
.createSpecimenScanGeneralDetailSection(getConversationHolder(), parent
, this, ExpandableComposite
.TWISTIE
| ExpandableComposite
.EXPANDED
);
839 private void createLivingPlantPhotoSection(RootElement parent
) {
841 LivingPlantPhotoGeneralDetailSection section
= formFactory
.createLivingPlantPhotoGeneralDetailSection(getConversationHolder(), parent
, this, ExpandableComposite
.TWISTIE
| ExpandableComposite
.EXPANDED
);
846 private void createMediaSpecimenSection(RootElement parent
) {
848 MediaSpecimenGeneralDetailSection section
= formFactory
.createMediaSpecimenGeneralDetailSection(getConversationHolder(), parent
, this, ExpandableComposite
.TWISTIE
| ExpandableComposite
.EXPANDED
);
858 private void createFeatureDistributionSection(RootElement parent
) {
861 FeatureDistributionDetailSection featureDistributionSection
= formFactory
.createFeatureDistributionDetailSection(getConversationHolder(), parent
, this, ExpandableComposite
.TWISTIE
| ExpandableComposite
.EXPANDED
);
863 addPart(featureDistributionSection
);
867 * createPolytomousKeyNodeSection
871 private void createPolytomousKeyNodeSection(RootElement parent
) {
874 PolytomousKeyDetailSection polytomousKeyDetailSection
= formFactory
.createPolytomousKeyDetailSection(getConversationHolder(), parent
, this, ExpandableComposite
.TWISTIE
| ExpandableComposite
.COMPACT
);
876 formFactory
.createHorizontalSeparator(parent
, SWT
.BORDER
);
878 PolytomousKeyNodeDetailSection polytomousKeyNodeDetailSection
= formFactory
.createPolytomousKeyNodeDetailSection(getConversationHolder(), parent
, this, ExpandableComposite
.TWISTIE
| ExpandableComposite
.EXPANDED
);
880 formFactory
.createHorizontalSeparator(parent
, SWT
.BORDER
);
882 TaxonomicScopeSection taxonomicScopeSection
= formFactory
.createTaxonomicScopeSection(getConversationHolder(), parent
, ExpandableComposite
.TWISTIE
| ExpandableComposite
.COMPACT
);
884 addPart(polytomousKeyDetailSection
);
885 addPart(polytomousKeyNodeDetailSection
);
886 addPart(taxonomicScopeSection
);
891 * create the UseRecordSection
895 private void createUseRecordSection(RootElement parent
) {
898 UseRecordDetailSection descriptionUseRecordSection
= formFactory
.createUseRecordDetailSection(getConversationHolder(), parent
, this,ExpandableComposite
.TWISTIE
| ExpandableComposite
.EXPANDED
);
900 formFactory
.createHorizontalSeparator(parent
, SWT
.BORDER
);
902 addPart(descriptionUseRecordSection
);
912 private void createUserSection(RootElement parent
) {
915 UserDetailSection userDetailSection
= formFactory
.createUserDetailSection(getConversationHolder(), parent
, this, ExpandableComposite
.TWISTIE
| ExpandableComposite
.EXPANDED
);
917 GroupsByUserDetailSection groupByUserDetailSection
= formFactory
.createGroupsByUserDetailSection(getConversationHolder(), parent
, ExpandableComposite
.TWISTIE
| ExpandableComposite
.EXPANDED
);
919 addPart(userDetailSection
);
920 addPart(groupByUserDetailSection
);
924 * createTaxonRelationshipSection
928 private void createTaxonRelationshipSection(RootElement parent
) {
931 TaxonRelationshipDetailSection taxonRelationshipDetailSection
= formFactory
.createTaxonRelationshipDetailSection(getConversationHolder(), parent
, this, ExpandableComposite
.TWISTIE
| ExpandableComposite
.EXPANDED
);
933 ReferencedEntityDetailSection referencedEntityBaseDetailSection
= formFactory
.createReferencedEntityDetailSection(getConversationHolder(), parent
, this, ExpandableComposite
.TWISTIE
| ExpandableComposite
.EXPANDED
);
934 addPart(taxonRelationshipDetailSection
);
935 addPart(referencedEntityBaseDetailSection
);
941 private void createTermVocabularySection(RootElement parent
) {
944 TermVocabularyDetailSection termVocabularyDetailSection
= formFactory
.createTermVocabularyDetailSection(getConversationHolder(), parent
, this, ExpandableComposite
.TWISTIE
| ExpandableComposite
.EXPANDED
);
945 addPart(termVocabularyDetailSection
);
949 * createDefinedTermSection
953 private void createDefinedTermSection(RootElement parent
) {
956 AbstractFormSection definedTermDetailSection
= formFactory
.createDefinedTermDetailSection(getInput().getClass(), getConversationHolder(), parent
, this, ExpandableComposite
.TWISTIE
| ExpandableComposite
.EXPANDED
);
957 addPart(definedTermDetailSection
);