1cb2b6d99b4af8a5a7d171cfa69ba5356bb1b29a
[taxeditor.git] / eu.etaxonomy.taxeditor.bulkeditor / src / main / java / eu / etaxonomy / taxeditor / dataimport / transientServices / TransientTaxonService.java
1 // $Id$
2 /**
3 * Copyright (C) 2013 EDIT
4 * European Distributed Institute of Taxonomy
5 * http://www.e-taxonomy.eu
6 *
7 * The contents of this file are subject to the Mozilla Public License Version 1.1
8 * See LICENSE.TXT at the top of this package for the full license terms.
9 */
10 package eu.etaxonomy.taxeditor.dataimport.transientServices;
11
12 import java.io.IOException;
13 import java.util.Collection;
14 import java.util.EnumSet;
15 import java.util.List;
16 import java.util.Map;
17 import java.util.Set;
18 import java.util.UUID;
19
20 import org.apache.lucene.index.CorruptIndexException;
21 import org.apache.lucene.queryParser.ParseException;
22 import org.hibernate.LockMode;
23 import org.hibernate.Session;
24 import org.hibernate.criterion.Criterion;
25 import org.hibernate.envers.query.criteria.AuditCriterion;
26
27 import eu.etaxonomy.cdm.api.service.ITaxonService;
28 import eu.etaxonomy.cdm.api.service.TaxaAndNamesSearchMode;
29 import eu.etaxonomy.cdm.api.service.config.IFindTaxaAndNamesConfigurator;
30 import eu.etaxonomy.cdm.api.service.config.IIdentifiableEntityServiceConfigurator;
31 import eu.etaxonomy.cdm.api.service.config.MatchingTaxonConfigurator;
32 import eu.etaxonomy.cdm.api.service.config.SynonymDeletionConfigurator;
33 import eu.etaxonomy.cdm.api.service.config.TaxonDeletionConfigurator;
34 import eu.etaxonomy.cdm.api.service.exception.DataChangeNoRollbackException;
35 import eu.etaxonomy.cdm.api.service.exception.HomotypicalGroupChangeException;
36 import eu.etaxonomy.cdm.api.service.pager.Pager;
37 import eu.etaxonomy.cdm.api.service.search.LuceneMultiSearchException;
38 import eu.etaxonomy.cdm.api.service.search.SearchResult;
39 import eu.etaxonomy.cdm.api.service.util.TaxonRelationshipEdge;
40 import eu.etaxonomy.cdm.common.monitor.IProgressMonitor;
41 import eu.etaxonomy.cdm.model.common.Annotation;
42 import eu.etaxonomy.cdm.model.common.ISourceable;
43 import eu.etaxonomy.cdm.model.common.IdentifiableEntity;
44 import eu.etaxonomy.cdm.model.common.IdentifiableSource;
45 import eu.etaxonomy.cdm.model.common.LSID;
46 import eu.etaxonomy.cdm.model.common.Language;
47 import eu.etaxonomy.cdm.model.common.Marker;
48 import eu.etaxonomy.cdm.model.common.MarkerType;
49 import eu.etaxonomy.cdm.model.common.OrderedTermVocabulary;
50 import eu.etaxonomy.cdm.model.common.RelationshipBase;
51 import eu.etaxonomy.cdm.model.common.RelationshipBase.Direction;
52 import eu.etaxonomy.cdm.model.common.UuidAndTitleCache;
53 import eu.etaxonomy.cdm.model.description.DescriptionElementBase;
54 import eu.etaxonomy.cdm.model.description.Feature;
55 import eu.etaxonomy.cdm.model.description.PresenceAbsenceTermBase;
56 import eu.etaxonomy.cdm.model.location.NamedArea;
57 import eu.etaxonomy.cdm.model.media.Media;
58 import eu.etaxonomy.cdm.model.media.MediaRepresentation;
59 import eu.etaxonomy.cdm.model.media.Rights;
60 import eu.etaxonomy.cdm.model.name.HomotypicalGroup;
61 import eu.etaxonomy.cdm.model.name.Rank;
62 import eu.etaxonomy.cdm.model.name.TaxonNameBase;
63 import eu.etaxonomy.cdm.model.reference.Reference;
64 import eu.etaxonomy.cdm.model.taxon.Classification;
65 import eu.etaxonomy.cdm.model.taxon.Synonym;
66 import eu.etaxonomy.cdm.model.taxon.SynonymRelationship;
67 import eu.etaxonomy.cdm.model.taxon.SynonymRelationshipType;
68 import eu.etaxonomy.cdm.model.taxon.Taxon;
69 import eu.etaxonomy.cdm.model.taxon.TaxonBase;
70 import eu.etaxonomy.cdm.model.taxon.TaxonRelationship;
71 import eu.etaxonomy.cdm.model.taxon.TaxonRelationshipType;
72 import eu.etaxonomy.cdm.model.view.AuditEvent;
73 import eu.etaxonomy.cdm.model.view.AuditEventRecord;
74 import eu.etaxonomy.cdm.persistence.dao.common.AuditEventSort;
75 import eu.etaxonomy.cdm.persistence.fetch.CdmFetch;
76 import eu.etaxonomy.cdm.persistence.query.Grouping;
77 import eu.etaxonomy.cdm.persistence.query.MatchMode;
78 import eu.etaxonomy.cdm.persistence.query.OrderHint;
79 import eu.etaxonomy.cdm.strategy.cache.common.IIdentifiableEntityCacheStrategy;
80 import eu.etaxonomy.cdm.strategy.match.IMatchStrategy;
81 import eu.etaxonomy.cdm.strategy.merge.IMergeStrategy;
82
83 /**
84 * @author pplitzner
85 * @date 27.09.2013
86 *
87 */
88 public class TransientTaxonService implements ITaxonService {
89
90 private final ITaxonService defaultTaxonService;
91
92 /**
93 * @param defaultTaxonService
94 */
95 public TransientTaxonService(ITaxonService defaultTaxonService) {
96 this.defaultTaxonService = defaultTaxonService;
97 }
98
99 /**
100 * @param t
101 * @param pageSize
102 * @param pageNumber
103 * @param sort
104 * @param propertyPaths
105 * @return
106 * @see eu.etaxonomy.cdm.api.service.IVersionableService#pageAuditEvents(eu.etaxonomy.cdm.model.common.VersionableEntity, java.lang.Integer, java.lang.Integer, eu.etaxonomy.cdm.persistence.dao.common.AuditEventSort, java.util.List)
107 */
108 @Override
109 public Pager<AuditEventRecord<TaxonBase>> pageAuditEvents(TaxonBase t, Integer pageSize, Integer pageNumber, AuditEventSort sort, List<String> propertyPaths) {
110 return defaultTaxonService.pageAuditEvents(t, pageSize, pageNumber, sort, propertyPaths);
111 }
112
113 /**
114 * @param annotatedObj
115 * @param status
116 * @param pageSize
117 * @param pageNumber
118 * @param orderHints
119 * @param propertyPaths
120 * @return
121 * @see eu.etaxonomy.cdm.api.service.IAnnotatableService#getAnnotations(eu.etaxonomy.cdm.model.common.AnnotatableEntity, eu.etaxonomy.cdm.model.common.MarkerType, java.lang.Integer, java.lang.Integer, java.util.List, java.util.List)
122 */
123 @Override
124 public Pager<Annotation> getAnnotations(TaxonBase annotatedObj, MarkerType status, Integer pageSize, Integer pageNumber, List<OrderHint> orderHints, List<String> propertyPaths) {
125 return defaultTaxonService.getAnnotations(annotatedObj, status, pageSize, pageNumber, orderHints, propertyPaths);
126 }
127
128 /**
129 *
130 * @see eu.etaxonomy.cdm.api.service.IService#clear()
131 */
132 @Override
133 public void clear() {
134 defaultTaxonService.clear();
135 }
136
137 /**
138 * @param t
139 * @param lockMode
140 * @see eu.etaxonomy.cdm.api.service.IService#lock(eu.etaxonomy.cdm.model.common.ICdmBase, org.hibernate.LockMode)
141 */
142 @Override
143 public void lock(TaxonBase t, LockMode lockMode) {
144 defaultTaxonService.lock(t, lockMode);
145 }
146
147 /**
148 * @param t
149 * @param lockMode
150 * @param propertyPaths
151 * @see eu.etaxonomy.cdm.api.service.IService#refresh(eu.etaxonomy.cdm.model.common.ICdmBase, org.hibernate.LockMode, java.util.List)
152 */
153 @Override
154 public void refresh(TaxonBase t, LockMode lockMode, List<String> propertyPaths) {
155 defaultTaxonService.refresh(t, lockMode, propertyPaths);
156 }
157
158 /**
159 *
160 * @see eu.etaxonomy.cdm.api.service.IIdentifiableEntityService#updateTitleCache()
161 */
162 @Override
163 public void updateTitleCache() {
164 defaultTaxonService.updateTitleCache();
165 }
166
167 /**
168 * @param t
169 * @return
170 * @see eu.etaxonomy.cdm.api.service.IVersionableService#getNextAuditEvent(eu.etaxonomy.cdm.model.common.VersionableEntity)
171 */
172 @Override
173 public AuditEventRecord<TaxonBase> getNextAuditEvent(TaxonBase t) {
174 return defaultTaxonService.getNextAuditEvent(t);
175 }
176
177 /**
178 * @param annotatableEntity
179 * @param technical
180 * @param pageSize
181 * @param pageNumber
182 * @param orderHints
183 * @param propertyPaths
184 * @return
185 * @see eu.etaxonomy.cdm.api.service.IAnnotatableService#getMarkers(eu.etaxonomy.cdm.model.common.AnnotatableEntity, java.lang.Boolean, java.lang.Integer, java.lang.Integer, java.util.List, java.util.List)
186 */
187 @Override
188 public Pager<Marker> getMarkers(TaxonBase annotatableEntity, Boolean technical, Integer pageSize, Integer pageNumber, List<OrderHint> orderHints, List<String> propertyPaths) {
189 return defaultTaxonService.getMarkers(annotatableEntity, technical, pageSize, pageNumber, orderHints, propertyPaths);
190 }
191
192 /**
193 * @param clazz
194 * @param stepSize
195 * @param cacheStrategy
196 * @param monitor
197 * @see eu.etaxonomy.cdm.api.service.IIdentifiableEntityService#updateTitleCache(java.lang.Class, java.lang.Integer, eu.etaxonomy.cdm.strategy.cache.common.IIdentifiableEntityCacheStrategy, eu.etaxonomy.cdm.common.monitor.IProgressMonitor)
198 */
199 @Override
200 public void updateTitleCache(Class<? extends TaxonBase> clazz, Integer stepSize, IIdentifiableEntityCacheStrategy<TaxonBase> cacheStrategy, IProgressMonitor monitor) {
201 defaultTaxonService.updateTitleCache(clazz, stepSize, cacheStrategy, monitor);
202 }
203
204 /**
205 * @param t
206 * @return
207 * @see eu.etaxonomy.cdm.api.service.IVersionableService#getPreviousAuditEvent(eu.etaxonomy.cdm.model.common.VersionableEntity)
208 */
209 @Override
210 public AuditEventRecord<TaxonBase> getPreviousAuditEvent(TaxonBase t) {
211 return defaultTaxonService.getPreviousAuditEvent(t);
212 }
213
214 /**
215 * @param clazz
216 * @return
217 * @see eu.etaxonomy.cdm.api.service.IService#count(java.lang.Class)
218 */
219 @Override
220 public int count(Class<? extends TaxonBase> clazz) {
221 return defaultTaxonService.count(clazz);
222 }
223
224 /**
225 * @param clazz
226 * @param from
227 * @param to
228 * @param criteria
229 * @param pageSize
230 * @param pageValue
231 * @param sort
232 * @param propertyPaths
233 * @return
234 * @see eu.etaxonomy.cdm.api.service.IVersionableService#pageAuditEvents(java.lang.Class, eu.etaxonomy.cdm.model.view.AuditEvent, eu.etaxonomy.cdm.model.view.AuditEvent, java.util.List, java.lang.Integer, java.lang.Integer, eu.etaxonomy.cdm.persistence.dao.common.AuditEventSort, java.util.List)
235 */
236 @Override
237 public Pager<AuditEventRecord<TaxonBase>> pageAuditEvents(Class<? extends TaxonBase> clazz, AuditEvent from, AuditEvent to, List<AuditCriterion> criteria, Integer pageSize, Integer pageValue, AuditEventSort sort, List<String> propertyPaths) {
238 return defaultTaxonService.pageAuditEvents(clazz, from, to, criteria, pageSize, pageValue, sort, propertyPaths);
239 }
240
241 /**
242 * @param lsid
243 * @return
244 * @see eu.etaxonomy.cdm.api.service.IIdentifiableEntityService#find(eu.etaxonomy.cdm.model.common.LSID)
245 */
246 @Override
247 public TaxonBase find(LSID lsid) {
248 return defaultTaxonService.find(lsid);
249 }
250
251 /**
252 * @param persistentObject
253 * @return
254 * @see eu.etaxonomy.cdm.api.service.IService#delete(eu.etaxonomy.cdm.model.common.ICdmBase)
255 */
256 @Override
257 public UUID delete(TaxonBase persistentObject) {
258 return defaultTaxonService.delete(persistentObject);
259 }
260
261 /**
262 * @param clazz
263 * @param technical
264 * @param pageSize
265 * @param pageNumber
266 * @param propertyPaths
267 * @return
268 * @see eu.etaxonomy.cdm.api.service.IAnnotatableService#groupMarkers(java.lang.Class, java.lang.Boolean, java.lang.Integer, java.lang.Integer, java.util.List)
269 */
270 @Override
271 public List<Object[]> groupMarkers(Class<? extends TaxonBase> clazz, Boolean technical, Integer pageSize, Integer pageNumber, List<String> propertyPaths) {
272 return defaultTaxonService.groupMarkers(clazz, technical, pageSize, pageNumber, propertyPaths);
273 }
274
275 /**
276 * @param uuid
277 * @return
278 * @see eu.etaxonomy.cdm.api.service.IService#exists(java.util.UUID)
279 */
280 @Override
281 public boolean exists(UUID uuid) {
282 return defaultTaxonService.exists(uuid);
283 }
284
285 /**
286 * @param limit
287 * @param start
288 * @return
289 * @see eu.etaxonomy.cdm.api.service.ITaxonService#getAllSynonyms(int, int)
290 */
291 @Override
292 public List<Synonym> getAllSynonyms(int limit, int start) {
293 return defaultTaxonService.getAllSynonyms(limit, start);
294 }
295
296 /**
297 * @param x
298 * @param y
299 * @return
300 * @see eu.etaxonomy.cdm.api.service.IIdentifiableEntityService#replace(eu.etaxonomy.cdm.model.common.IdentifiableEntity, eu.etaxonomy.cdm.model.common.IdentifiableEntity)
301 */
302 @Override
303 public TaxonBase replace(TaxonBase x, TaxonBase y) {
304 return defaultTaxonService.replace(x, y);
305 }
306
307 /**
308 * @param limit
309 * @param start
310 * @return
311 * @see eu.etaxonomy.cdm.api.service.ITaxonService#getAllTaxa(int, int)
312 */
313 @Override
314 public List<Taxon> getAllTaxa(int limit, int start) {
315 return defaultTaxonService.getAllTaxa(limit, start);
316 }
317
318 /**
319 * @param uuidSet
320 * @return
321 * @see eu.etaxonomy.cdm.api.service.IService#find(java.util.Set)
322 */
323 @Override
324 public List<TaxonBase> find(Set<UUID> uuidSet) {
325 return defaultTaxonService.find(uuidSet);
326 }
327
328 /**
329 * @param t
330 * @param pageSize
331 * @param pageNumber
332 * @param propertyPaths
333 * @return
334 * @see eu.etaxonomy.cdm.api.service.IIdentifiableEntityService#getSources(eu.etaxonomy.cdm.model.common.IdentifiableEntity, java.lang.Integer, java.lang.Integer, java.util.List)
335 */
336 @Override
337 public Pager<IdentifiableSource> getSources(TaxonBase t, Integer pageSize, Integer pageNumber, List<String> propertyPaths) {
338 return defaultTaxonService.getSources(t, pageSize, pageNumber, propertyPaths);
339 }
340
341 /**
342 * @param sec
343 * @param cdmFetch
344 * @param onlyWithChildren
345 * @return
346 * @deprecated
347 * @see eu.etaxonomy.cdm.api.service.ITaxonService#getRootTaxa(eu.etaxonomy.cdm.model.reference.Reference, eu.etaxonomy.cdm.persistence.fetch.CdmFetch, boolean)
348 */
349 @Deprecated
350 @Override
351 public List<Taxon> getRootTaxa(Reference sec, CdmFetch cdmFetch, boolean onlyWithChildren) {
352 return defaultTaxonService.getRootTaxa(sec, cdmFetch, onlyWithChildren);
353 }
354
355 /**
356 * @param uuid
357 * @return
358 * @see eu.etaxonomy.cdm.api.service.IService#find(java.util.UUID)
359 */
360 @Override
361 public TaxonBase find(UUID uuid) {
362 return defaultTaxonService.find(uuid);
363 }
364
365 /**
366 * @param rank
367 * @param sec
368 * @param onlyWithChildren
369 * @param withMisapplications
370 * @param propertyPaths
371 * @return
372 * @deprecated
373 * @see eu.etaxonomy.cdm.api.service.ITaxonService#getRootTaxa(eu.etaxonomy.cdm.model.name.Rank, eu.etaxonomy.cdm.model.reference.Reference, boolean, boolean, java.util.List)
374 */
375 @Deprecated
376 @Override
377 public List<Taxon> getRootTaxa(Rank rank, Reference sec, boolean onlyWithChildren, boolean withMisapplications, List<String> propertyPaths) {
378 return defaultTaxonService.getRootTaxa(rank, sec, onlyWithChildren, withMisapplications, propertyPaths);
379 }
380
381 /**
382 * @param id
383 * @return
384 * @see eu.etaxonomy.cdm.api.service.IService#find(int)
385 */
386 @Override
387 public TaxonBase find(int id) {
388 return defaultTaxonService.find(id);
389 }
390
391 /**
392 * @param t
393 * @param pageSize
394 * @param pageNumber
395 * @param propertyPaths
396 * @return
397 * @see eu.etaxonomy.cdm.api.service.IIdentifiableEntityService#getRights(eu.etaxonomy.cdm.model.common.IdentifiableEntity, java.lang.Integer, java.lang.Integer, java.util.List)
398 */
399 @Override
400 public Pager<Rights> getRights(TaxonBase t, Integer pageSize, Integer pageNumber, List<String> propertyPaths) {
401 return defaultTaxonService.getRights(t, pageSize, pageNumber, propertyPaths);
402 }
403
404 /**
405 * @param clazz
406 * @param technical
407 * @return
408 * @see eu.etaxonomy.cdm.api.service.IAnnotatableService#countMarkers(java.lang.Class, java.lang.Boolean)
409 */
410 @Override
411 public int countMarkers(Class<? extends TaxonBase> clazz, Boolean technical) {
412 return defaultTaxonService.countMarkers(clazz, technical);
413 }
414
415 /**
416 * @param idSet
417 * @return
418 * @see eu.etaxonomy.cdm.api.service.IService#findById(java.util.Set)
419 */
420 @Override
421 public List<TaxonBase> findById(Set<Integer> idSet) {
422 return defaultTaxonService.findById(idSet);
423 }
424
425 /**
426 * @param clazz
427 * @param idInSource
428 * @param idNamespace
429 * @return
430 * @see eu.etaxonomy.cdm.api.service.IIdentifiableEntityService#getSourcedObjectByIdInSource(java.lang.Class, java.lang.String, java.lang.String)
431 */
432 @Override
433 public ISourceable getSourcedObjectByIdInSource(Class clazz, String idInSource, String idNamespace) {
434 return defaultTaxonService.getSourcedObjectByIdInSource(clazz, idInSource, idNamespace);
435 }
436
437 /**
438 * @return
439 * @see eu.etaxonomy.cdm.api.service.IService#getSession()
440 */
441 @Override
442 public Session getSession() {
443 return defaultTaxonService.getSession();
444 }
445
446 /**
447 * @return
448 * @see eu.etaxonomy.cdm.api.service.IIdentifiableEntityService#getUuidAndTitleCache()
449 */
450 @Override
451 public List<UuidAndTitleCache<TaxonBase>> getUuidAndTitleCache() {
452 return defaultTaxonService.getUuidAndTitleCache();
453 }
454
455 /**
456 * @param clazz
457 * @param limit
458 * @param start
459 * @param groups
460 * @param propertyPaths
461 * @return
462 * @see eu.etaxonomy.cdm.api.service.IService#group(java.lang.Class, java.lang.Integer, java.lang.Integer, java.util.List, java.util.List)
463 */
464 @Override
465 public List<Object[]> group(Class<? extends TaxonBase> clazz, Integer limit, Integer start, List<Grouping> groups, List<String> propertyPaths) {
466 return defaultTaxonService.group(clazz, limit, start, groups, propertyPaths);
467 }
468
469 /**
470 * @param limit
471 * @param start
472 * @return
473 * @see eu.etaxonomy.cdm.api.service.ITaxonService#getAllRelationships(int, int)
474 */
475 @Override
476 public List<RelationshipBase> getAllRelationships(int limit, int start) {
477 return defaultTaxonService.getAllRelationships(limit, start);
478 }
479
480 /**
481 * @param clazz
482 * @param queryString
483 * @param matchmode
484 * @param criteria
485 * @param pageSize
486 * @param pageNumber
487 * @param orderHints
488 * @param propertyPaths
489 * @return
490 * @see eu.etaxonomy.cdm.api.service.IIdentifiableEntityService#findByTitle(java.lang.Class, java.lang.String, eu.etaxonomy.cdm.persistence.query.MatchMode, java.util.List, java.lang.Integer, java.lang.Integer, java.util.List, java.util.List)
491 */
492 @Override
493 public Pager<TaxonBase> findByTitle(Class<? extends TaxonBase> clazz, String queryString, MatchMode matchmode, List<Criterion> criteria, Integer pageSize, Integer pageNumber, List<OrderHint> orderHints, List<String> propertyPaths) {
494 return defaultTaxonService.findByTitle(clazz, queryString, matchmode, criteria, pageSize, pageNumber, orderHints, propertyPaths);
495 }
496
497 /**
498 * @return
499 * @deprecated
500 * @see eu.etaxonomy.cdm.api.service.ITaxonService#getTaxonRelationshipTypeVocabulary()
501 */
502 @Deprecated
503 @Override
504 public OrderedTermVocabulary<TaxonRelationshipType> getTaxonRelationshipTypeVocabulary() {
505 return defaultTaxonService.getTaxonRelationshipTypeVocabulary();
506 }
507
508 /**
509 * @param name
510 * @param sec
511 * @return
512 * @see eu.etaxonomy.cdm.api.service.ITaxonService#searchTaxaByName(java.lang.String, eu.etaxonomy.cdm.model.reference.Reference)
513 */
514 @Override
515 public List<TaxonBase> searchTaxaByName(String name, Reference sec) {
516 return defaultTaxonService.searchTaxaByName(name, sec);
517 }
518
519 /**
520 * @param synonym
521 * @param acceptedTaxon
522 * @see eu.etaxonomy.cdm.api.service.ITaxonService#swapSynonymAndAcceptedTaxon(eu.etaxonomy.cdm.model.taxon.Synonym, eu.etaxonomy.cdm.model.taxon.Taxon)
523 */
524 @Override
525 public void swapSynonymAndAcceptedTaxon(Synonym synonym, Taxon acceptedTaxon) {
526 defaultTaxonService.swapSynonymAndAcceptedTaxon(synonym, acceptedTaxon);
527 }
528
529 /**
530 * @param type
531 * @param limit
532 * @param start
533 * @param orderHints
534 * @param propertyPaths
535 * @return
536 * @see eu.etaxonomy.cdm.api.service.IService#list(java.lang.Class, java.lang.Integer, java.lang.Integer, java.util.List, java.util.List)
537 */
538 @Override
539 public List<TaxonBase> list(Class<? extends TaxonBase> type, Integer limit, Integer start, List<OrderHint> orderHints, List<String> propertyPaths) {
540 return defaultTaxonService.list(type, limit, start, orderHints, propertyPaths);
541 }
542
543 /**
544 * @param configurator
545 * @return
546 * @see eu.etaxonomy.cdm.api.service.IIdentifiableEntityService#findByTitle(eu.etaxonomy.cdm.api.service.config.IIdentifiableEntityServiceConfigurator)
547 */
548 @Override
549 public Pager<TaxonBase> findByTitle(IIdentifiableEntityServiceConfigurator<TaxonBase> configurator) {
550 return defaultTaxonService.findByTitle(configurator);
551 }
552
553 /**
554 * @param synonym
555 * @param acceptedTaxon
556 * @param deleteSynonym
557 * @param copyCitationInfo
558 * @param citation
559 * @param microCitation
560 * @return
561 * @throws HomotypicalGroupChangeException
562 * @see eu.etaxonomy.cdm.api.service.ITaxonService#changeSynonymToAcceptedTaxon(eu.etaxonomy.cdm.model.taxon.Synonym, eu.etaxonomy.cdm.model.taxon.Taxon, boolean, boolean, eu.etaxonomy.cdm.model.reference.Reference, java.lang.String)
563 */
564 @Override
565 public Taxon changeSynonymToAcceptedTaxon(Synonym synonym, Taxon acceptedTaxon, boolean deleteSynonym, boolean copyCitationInfo, Reference citation, String microCitation) throws HomotypicalGroupChangeException {
566 return defaultTaxonService.changeSynonymToAcceptedTaxon(synonym, acceptedTaxon, deleteSynonym, copyCitationInfo, citation, microCitation);
567 }
568
569 /**
570 * @param clazz
571 * @param queryString
572 * @param matchmode
573 * @param criteria
574 * @return
575 * @see eu.etaxonomy.cdm.api.service.IIdentifiableEntityService#countByTitle(java.lang.Class, java.lang.String, eu.etaxonomy.cdm.persistence.query.MatchMode, java.util.List)
576 */
577 @Override
578 public Integer countByTitle(Class<? extends TaxonBase> clazz, String queryString, MatchMode matchmode, List<Criterion> criteria) {
579 return defaultTaxonService.countByTitle(clazz, queryString, matchmode, criteria);
580 }
581
582 /**
583 * @param uuid
584 * @return
585 * @see eu.etaxonomy.cdm.api.service.IService#load(java.util.UUID)
586 */
587 @Override
588 public TaxonBase load(UUID uuid) {
589 return defaultTaxonService.load(uuid);
590 }
591
592 /**
593 * @param uuid
594 * @param propertyPaths
595 * @return
596 * @see eu.etaxonomy.cdm.api.service.IService#load(java.util.UUID, java.util.List)
597 */
598 @Override
599 public TaxonBase load(UUID uuid, List<String> propertyPaths) {
600 return defaultTaxonService.load(uuid, propertyPaths);
601 }
602
603 /**
604 * @param configurator
605 * @return
606 * @see eu.etaxonomy.cdm.api.service.IIdentifiableEntityService#countByTitle(eu.etaxonomy.cdm.api.service.config.IIdentifiableEntityServiceConfigurator)
607 */
608 @Override
609 public Integer countByTitle(IIdentifiableEntityServiceConfigurator<TaxonBase> configurator) {
610 return defaultTaxonService.countByTitle(configurator);
611 }
612
613 /**
614 * @param transientObject
615 * @return
616 * @see eu.etaxonomy.cdm.api.service.IService#merge(eu.etaxonomy.cdm.model.common.ICdmBase)
617 */
618 @Override
619 public TaxonBase merge(TaxonBase transientObject) {
620 return defaultTaxonService.merge(transientObject);
621 }
622
623 /**
624 * @param clazz
625 * @param queryString
626 * @param matchmode
627 * @param criteria
628 * @param pageSize
629 * @param pageNumber
630 * @param orderHints
631 * @param propertyPaths
632 * @return
633 * @see eu.etaxonomy.cdm.api.service.IIdentifiableEntityService#listByTitle(java.lang.Class, java.lang.String, eu.etaxonomy.cdm.persistence.query.MatchMode, java.util.List, java.lang.Integer, java.lang.Integer, java.util.List, java.util.List)
634 */
635 @Override
636 public List<TaxonBase> listByTitle(Class<? extends TaxonBase> clazz, String queryString, MatchMode matchmode, List<Criterion> criteria, Integer pageSize, Integer pageNumber, List<OrderHint> orderHints, List<String> propertyPaths) {
637 return defaultTaxonService.listByTitle(clazz, queryString, matchmode, criteria, pageSize, pageNumber, orderHints, propertyPaths);
638 }
639
640 /**
641 * @param type
642 * @param pageSize
643 * @param pageNumber
644 * @param orderHints
645 * @param propertyPaths
646 * @return
647 * @see eu.etaxonomy.cdm.api.service.IService#page(java.lang.Class, java.lang.Integer, java.lang.Integer, java.util.List, java.util.List)
648 */
649 @Override
650 public Pager<TaxonBase> page(Class<? extends TaxonBase> type, Integer pageSize, Integer pageNumber, List<OrderHint> orderHints, List<String> propertyPaths) {
651 return defaultTaxonService.page(type, pageSize, pageNumber, orderHints, propertyPaths);
652 }
653
654 /**
655 * @param persistentObject
656 * @return
657 * @see eu.etaxonomy.cdm.api.service.IService#refresh(eu.etaxonomy.cdm.model.common.ICdmBase)
658 */
659 @Override
660 public UUID refresh(TaxonBase persistentObject) {
661 return defaultTaxonService.refresh(persistentObject);
662 }
663
664 /**
665 * @param synonym
666 * @param toTaxon
667 * @param taxonRelationshipType
668 * @param reference
669 * @param microReference
670 * @return
671 * @see eu.etaxonomy.cdm.api.service.ITaxonService#changeSynonymToRelatedTaxon(eu.etaxonomy.cdm.model.taxon.Synonym, eu.etaxonomy.cdm.model.taxon.Taxon, eu.etaxonomy.cdm.model.taxon.TaxonRelationshipType, eu.etaxonomy.cdm.model.reference.Reference, java.lang.String)
672 */
673 @Override
674 public Taxon changeSynonymToRelatedTaxon(Synonym synonym, Taxon toTaxon, TaxonRelationshipType taxonRelationshipType, Reference reference, String microReference) {
675 return defaultTaxonService.changeSynonymToRelatedTaxon(synonym, toTaxon, taxonRelationshipType, reference, microReference);
676 }
677
678 /**
679 * @param clazz
680 * @param queryString
681 * @param matchmode
682 * @param criteria
683 * @param pageSize
684 * @param pageNumber
685 * @param orderHints
686 * @param propertyPaths
687 * @return
688 * @see eu.etaxonomy.cdm.api.service.IIdentifiableEntityService#listByReferenceTitle(java.lang.Class, java.lang.String, eu.etaxonomy.cdm.persistence.query.MatchMode, java.util.List, java.lang.Integer, java.lang.Integer, java.util.List, java.util.List)
689 */
690 @Override
691 public List<TaxonBase> listByReferenceTitle(Class<? extends TaxonBase> clazz, String queryString, MatchMode matchmode, List<Criterion> criteria, Integer pageSize, Integer pageNumber, List<OrderHint> orderHints, List<String> propertyPaths) {
692 return defaultTaxonService.listByReferenceTitle(clazz, queryString, matchmode, criteria, pageSize, pageNumber, orderHints, propertyPaths);
693 }
694
695 /**
696 * @param tableName
697 * @param limit
698 * @param start
699 * @return
700 * @see eu.etaxonomy.cdm.api.service.IService#rows(java.lang.String, int, int)
701 */
702 @Override
703 public List<TaxonBase> rows(String tableName, int limit, int start) {
704 return defaultTaxonService.rows(tableName, limit, start);
705 }
706
707 /**
708 * @param newInstances
709 * @return
710 * @see eu.etaxonomy.cdm.api.service.IService#save(java.util.Collection)
711 */
712 @Override
713 public Map<UUID, TaxonBase> save(Collection<TaxonBase> newInstances) {
714 return null;
715 }
716
717 /**
718 * @param syn
719 * @param taxon
720 * @return
721 * @see eu.etaxonomy.cdm.api.service.ITaxonService#deleteSynonymRelationships(eu.etaxonomy.cdm.model.taxon.Synonym, eu.etaxonomy.cdm.model.taxon.Taxon)
722 */
723 @Override
724 public long deleteSynonymRelationships(Synonym syn, Taxon taxon) {
725 return defaultTaxonService.deleteSynonymRelationships(syn, taxon);
726 }
727
728 /**
729 * @param newInstance
730 * @return
731 * @see eu.etaxonomy.cdm.api.service.IService#save(eu.etaxonomy.cdm.model.common.ICdmBase)
732 */
733 @Override
734 public UUID save(TaxonBase newInstance) {
735 return null;
736 }
737
738 /**
739 * @param transientObject
740 * @return
741 * @see eu.etaxonomy.cdm.api.service.IService#saveOrUpdate(eu.etaxonomy.cdm.model.common.ICdmBase)
742 */
743 @Override
744 public UUID saveOrUpdate(TaxonBase transientObject) {
745 return null;
746 }
747
748 /**
749 * @param synonym
750 * @param newHomotypicalGroup
751 * @param targetTaxon
752 * @param removeFromOtherTaxa
753 * @param setBasionymRelationIfApplicable
754 * @see eu.etaxonomy.cdm.api.service.ITaxonService#changeHomotypicalGroupOfSynonym(eu.etaxonomy.cdm.model.taxon.Synonym, eu.etaxonomy.cdm.model.name.HomotypicalGroup, eu.etaxonomy.cdm.model.taxon.Taxon, boolean, boolean)
755 */
756 @Override
757 public void changeHomotypicalGroupOfSynonym(Synonym synonym, HomotypicalGroup newHomotypicalGroup, Taxon targetTaxon, boolean removeFromOtherTaxa, boolean setBasionymRelationIfApplicable) {
758 defaultTaxonService.changeHomotypicalGroupOfSynonym(synonym, newHomotypicalGroup, targetTaxon, removeFromOtherTaxa, setBasionymRelationIfApplicable);
759 }
760
761 /**
762 * @param transientObjects
763 * @return
764 * @see eu.etaxonomy.cdm.api.service.IService#saveOrUpdate(java.util.Collection)
765 */
766 @Override
767 public Map<UUID, TaxonBase> saveOrUpdate(Collection<TaxonBase> transientObjects) {
768 return null;
769 }
770
771 /**
772 * @param transientObject
773 * @return
774 * @see eu.etaxonomy.cdm.api.service.IService#update(eu.etaxonomy.cdm.model.common.ICdmBase)
775 */
776 @Override
777 public UUID update(TaxonBase transientObject) {
778 return defaultTaxonService.update(transientObject);
779 }
780
781 /**
782 * @param example
783 * @param includeProperties
784 * @param limit
785 * @param start
786 * @param orderHints
787 * @param propertyPaths
788 * @return
789 * @see eu.etaxonomy.cdm.api.service.IService#list(eu.etaxonomy.cdm.model.common.ICdmBase, java.util.Set, java.lang.Integer, java.lang.Integer, java.util.List, java.util.List)
790 */
791 @Override
792 public List<TaxonBase> list(TaxonBase example, Set<String> includeProperties, Integer limit, Integer start, List<OrderHint> orderHints, List<String> propertyPaths) {
793 return defaultTaxonService.list(example, includeProperties, limit, start, orderHints, propertyPaths);
794 }
795
796 /**
797 * @param oldSynonymRelation
798 * @param newTaxon
799 * @param moveHomotypicGroup
800 * @param newSynonymRelationshipType
801 * @param newReference
802 * @param newReferenceDetail
803 * @param keepReference
804 * @return
805 * @throws HomotypicalGroupChangeException
806 * @see eu.etaxonomy.cdm.api.service.ITaxonService#moveSynonymToAnotherTaxon(eu.etaxonomy.cdm.model.taxon.SynonymRelationship, eu.etaxonomy.cdm.model.taxon.Taxon, boolean, eu.etaxonomy.cdm.model.taxon.SynonymRelationshipType, eu.etaxonomy.cdm.model.reference.Reference, java.lang.String, boolean)
807 */
808 @Override
809 public SynonymRelationship moveSynonymToAnotherTaxon(SynonymRelationship oldSynonymRelation, Taxon newTaxon, boolean moveHomotypicGroup, SynonymRelationshipType newSynonymRelationshipType, Reference newReference, String newReferenceDetail, boolean keepReference) throws HomotypicalGroupChangeException {
810 return defaultTaxonService.moveSynonymToAnotherTaxon(oldSynonymRelation, newTaxon, moveHomotypicGroup, newSynonymRelationshipType, newReference, newReferenceDetail, keepReference);
811 }
812
813 /**
814 * @param clazz
815 * @param matchStrategy
816 * @param mergeStrategy
817 * @return
818 * @see eu.etaxonomy.cdm.api.service.IIdentifiableEntityService#deduplicate(java.lang.Class, eu.etaxonomy.cdm.strategy.match.IMatchStrategy, eu.etaxonomy.cdm.strategy.merge.IMergeStrategy)
819 */
820 @Override
821 public int deduplicate(Class<? extends TaxonBase> clazz, IMatchStrategy matchStrategy, IMergeStrategy mergeStrategy) {
822 return defaultTaxonService.deduplicate(clazz, matchStrategy, mergeStrategy);
823 }
824
825 /**
826 * @param clazz
827 * @param queryString
828 * @param pageSize
829 * @param pageNumber
830 * @param orderHints
831 * @param matchMode
832 * @return
833 * @see eu.etaxonomy.cdm.api.service.IIdentifiableEntityService#findTitleCache(java.lang.Class, java.lang.String, java.lang.Integer, java.lang.Integer, java.util.List, eu.etaxonomy.cdm.persistence.query.MatchMode)
834 */
835 @Override
836 public Pager<TaxonBase> findTitleCache(Class<? extends TaxonBase> clazz, String queryString, Integer pageSize, Integer pageNumber, List<OrderHint> orderHints, MatchMode matchMode) {
837 return defaultTaxonService.findTitleCache(clazz, queryString, pageSize, pageNumber, orderHints, matchMode);
838 }
839
840 /**
841 * @param taxon
842 * @param type
843 * @param pageSize
844 * @param pageNumber
845 * @param orderHints
846 * @param propertyPaths
847 * @return
848 * @see eu.etaxonomy.cdm.api.service.ITaxonService#listToTaxonRelationships(eu.etaxonomy.cdm.model.taxon.Taxon, eu.etaxonomy.cdm.model.taxon.TaxonRelationshipType, java.lang.Integer, java.lang.Integer, java.util.List, java.util.List)
849 */
850 @Override
851 public List<TaxonRelationship> listToTaxonRelationships(Taxon taxon, TaxonRelationshipType type, Integer pageSize, Integer pageNumber, List<OrderHint> orderHints, List<String> propertyPaths) {
852 return defaultTaxonService.listToTaxonRelationships(taxon, type, pageSize, pageNumber, orderHints, propertyPaths);
853 }
854
855 /**
856 * @param taxon
857 * @param type
858 * @param pageSize
859 * @param pageNumber
860 * @param orderHints
861 * @param propertyPaths
862 * @return
863 * @see eu.etaxonomy.cdm.api.service.ITaxonService#pageToTaxonRelationships(eu.etaxonomy.cdm.model.taxon.Taxon, eu.etaxonomy.cdm.model.taxon.TaxonRelationshipType, java.lang.Integer, java.lang.Integer, java.util.List, java.util.List)
864 */
865 @Override
866 public Pager<TaxonRelationship> pageToTaxonRelationships(Taxon taxon, TaxonRelationshipType type, Integer pageSize, Integer pageNumber, List<OrderHint> orderHints, List<String> propertyPaths) {
867 return defaultTaxonService.pageToTaxonRelationships(taxon, type, pageSize, pageNumber, orderHints, propertyPaths);
868 }
869
870 /**
871 * @param taxon
872 * @param type
873 * @param pageSize
874 * @param pageNumber
875 * @param orderHints
876 * @param propertyPaths
877 * @return
878 * @see eu.etaxonomy.cdm.api.service.ITaxonService#listFromTaxonRelationships(eu.etaxonomy.cdm.model.taxon.Taxon, eu.etaxonomy.cdm.model.taxon.TaxonRelationshipType, java.lang.Integer, java.lang.Integer, java.util.List, java.util.List)
879 */
880 @Override
881 public List<TaxonRelationship> listFromTaxonRelationships(Taxon taxon, TaxonRelationshipType type, Integer pageSize, Integer pageNumber, List<OrderHint> orderHints, List<String> propertyPaths) {
882 return defaultTaxonService.listFromTaxonRelationships(taxon, type, pageSize, pageNumber, orderHints, propertyPaths);
883 }
884
885 /**
886 * @param taxon
887 * @param type
888 * @param pageSize
889 * @param pageNumber
890 * @param orderHints
891 * @param propertyPaths
892 * @return
893 * @see eu.etaxonomy.cdm.api.service.ITaxonService#pageFromTaxonRelationships(eu.etaxonomy.cdm.model.taxon.Taxon, eu.etaxonomy.cdm.model.taxon.TaxonRelationshipType, java.lang.Integer, java.lang.Integer, java.util.List, java.util.List)
894 */
895 @Override
896 public Pager<TaxonRelationship> pageFromTaxonRelationships(Taxon taxon, TaxonRelationshipType type, Integer pageSize, Integer pageNumber, List<OrderHint> orderHints, List<String> propertyPaths) {
897 return defaultTaxonService.pageFromTaxonRelationships(taxon, type, pageSize, pageNumber, orderHints, propertyPaths);
898 }
899
900 /**
901 * @param taxon
902 * @param includeRelationships
903 * @param maxDepth
904 * @param limit
905 * @param start
906 * @param propertyPaths
907 * @return
908 * @see eu.etaxonomy.cdm.api.service.ITaxonService#listRelatedTaxa(eu.etaxonomy.cdm.model.taxon.Taxon, java.util.Set, java.lang.Integer, java.lang.Integer, java.lang.Integer, java.util.List)
909 */
910 @Override
911 public Set<Taxon> listRelatedTaxa(Taxon taxon, Set<TaxonRelationshipEdge> includeRelationships, Integer maxDepth, Integer limit, Integer start, List<String> propertyPaths) {
912 return defaultTaxonService.listRelatedTaxa(taxon, includeRelationships, maxDepth, limit, start, propertyPaths);
913 }
914
915 /**
916 * @param taxonBase
917 * @param limit
918 * @param start
919 * @param propertyPaths
920 * @return
921 * @see eu.etaxonomy.cdm.api.service.ITaxonService#listClassifications(eu.etaxonomy.cdm.model.taxon.TaxonBase, java.lang.Integer, java.lang.Integer, java.util.List)
922 */
923 @Override
924 public List<Classification> listClassifications(TaxonBase taxonBase, Integer limit, Integer start, List<String> propertyPaths) {
925 return defaultTaxonService.listClassifications(taxonBase, limit, start, propertyPaths);
926 }
927
928 /**
929 * @param synonym
930 * @param type
931 * @param pageSize
932 * @param pageNumber
933 * @param orderHints
934 * @param propertyPaths
935 * @return
936 * @see eu.etaxonomy.cdm.api.service.ITaxonService#getSynonyms(eu.etaxonomy.cdm.model.taxon.Synonym, eu.etaxonomy.cdm.model.taxon.SynonymRelationshipType, java.lang.Integer, java.lang.Integer, java.util.List, java.util.List)
937 */
938 @Override
939 public Pager<SynonymRelationship> getSynonyms(Synonym synonym, SynonymRelationshipType type, Integer pageSize, Integer pageNumber, List<OrderHint> orderHints, List<String> propertyPaths) {
940 return defaultTaxonService.getSynonyms(synonym, type, pageSize, pageNumber, orderHints, propertyPaths);
941 }
942
943 /**
944 * @param taxon
945 * @param type
946 * @param pageSize
947 * @param pageNumber
948 * @param orderHints
949 * @param propertyPaths
950 * @return
951 * @see eu.etaxonomy.cdm.api.service.ITaxonService#getSynonyms(eu.etaxonomy.cdm.model.taxon.Taxon, eu.etaxonomy.cdm.model.taxon.SynonymRelationshipType, java.lang.Integer, java.lang.Integer, java.util.List, java.util.List)
952 */
953 @Override
954 public Pager<SynonymRelationship> getSynonyms(Taxon taxon, SynonymRelationshipType type, Integer pageSize, Integer pageNumber, List<OrderHint> orderHints, List<String> propertyPaths) {
955 return defaultTaxonService.getSynonyms(taxon, type, pageSize, pageNumber, orderHints, propertyPaths);
956 }
957
958 /**
959 * @param taxon
960 * @param propertyPaths
961 * @return
962 * @see eu.etaxonomy.cdm.api.service.ITaxonService#getHomotypicSynonymsByHomotypicGroup(eu.etaxonomy.cdm.model.taxon.Taxon, java.util.List)
963 */
964 @Override
965 public List<Synonym> getHomotypicSynonymsByHomotypicGroup(Taxon taxon, List<String> propertyPaths) {
966 return defaultTaxonService.getHomotypicSynonymsByHomotypicGroup(taxon, propertyPaths);
967 }
968
969 /**
970 * @param taxon
971 * @param propertyPaths
972 * @return
973 * @see eu.etaxonomy.cdm.api.service.ITaxonService#getHeterotypicSynonymyGroups(eu.etaxonomy.cdm.model.taxon.Taxon, java.util.List)
974 */
975 @Override
976 public List<List<Synonym>> getHeterotypicSynonymyGroups(Taxon taxon, List<String> propertyPaths) {
977 return defaultTaxonService.getHeterotypicSynonymyGroups(taxon, propertyPaths);
978 }
979
980 /**
981 * @param clazz
982 * @param queryString
983 * @param pageSize
984 * @param pageNumber
985 * @param orderHints
986 * @param propertyPaths
987 * @return
988 * @see eu.etaxonomy.cdm.api.service.ITaxonService#search(java.lang.Class, java.lang.String, java.lang.Integer, java.lang.Integer, java.util.List, java.util.List)
989 */
990 @Override
991 public Pager<TaxonBase> search(Class<? extends TaxonBase> clazz, String queryString, Integer pageSize, Integer pageNumber, List<OrderHint> orderHints, List<String> propertyPaths) {
992 return defaultTaxonService.search(clazz, queryString, pageSize, pageNumber, orderHints, propertyPaths);
993 }
994
995 /**
996 * @param clazz
997 * @param uninomial
998 * @param infragenericEpithet
999 * @param specificEpithet
1000 * @param infraspecificEpithet
1001 * @param rank
1002 * @param pageSize
1003 * @param pageNumber
1004 * @return
1005 * @see eu.etaxonomy.cdm.api.service.ITaxonService#findTaxaByName(java.lang.Class, java.lang.String, java.lang.String, java.lang.String, java.lang.String, eu.etaxonomy.cdm.model.name.Rank, java.lang.Integer, java.lang.Integer)
1006 */
1007 @Override
1008 public Pager<TaxonBase> findTaxaByName(Class<? extends TaxonBase> clazz, String uninomial, String infragenericEpithet, String specificEpithet, String infraspecificEpithet, Rank rank, Integer pageSize, Integer pageNumber) {
1009 return defaultTaxonService.findTaxaByName(clazz, uninomial, infragenericEpithet, specificEpithet, infraspecificEpithet, rank, pageSize, pageNumber);
1010 }
1011
1012 /**
1013 * @param clazz
1014 * @param uninomial
1015 * @param infragenericEpithet
1016 * @param specificEpithet
1017 * @param infraspecificEpithet
1018 * @param rank
1019 * @param pageSize
1020 * @param pageNumber
1021 * @return
1022 * @see eu.etaxonomy.cdm.api.service.ITaxonService#listTaxaByName(java.lang.Class, java.lang.String, java.lang.String, java.lang.String, java.lang.String, eu.etaxonomy.cdm.model.name.Rank, java.lang.Integer, java.lang.Integer)
1023 */
1024 @Override
1025 public List<TaxonBase> listTaxaByName(Class<? extends TaxonBase> clazz, String uninomial, String infragenericEpithet, String specificEpithet, String infraspecificEpithet, Rank rank, Integer pageSize, Integer pageNumber) {
1026 return defaultTaxonService.listTaxaByName(clazz, uninomial, infragenericEpithet, specificEpithet, infraspecificEpithet, rank, pageSize, pageNumber);
1027 }
1028
1029 /**
1030 * @param configurator
1031 * @return
1032 * @see eu.etaxonomy.cdm.api.service.ITaxonService#findTaxaAndNames(eu.etaxonomy.cdm.api.service.config.IFindTaxaAndNamesConfigurator)
1033 */
1034 @Override
1035 public Pager<IdentifiableEntity> findTaxaAndNames(IFindTaxaAndNamesConfigurator configurator) {
1036 return defaultTaxonService.findTaxaAndNames(configurator);
1037 }
1038
1039 /**
1040 * @param queryString
1041 * @param classification
1042 * @param languages
1043 * @param highlightFragments
1044 * @param pageSize
1045 * @param pageNumber
1046 * @param orderHints
1047 * @param propertyPaths
1048 * @return
1049 * @throws CorruptIndexException
1050 * @throws IOException
1051 * @throws ParseException
1052 * @throws LuceneMultiSearchException
1053 * @deprecated
1054 * @see eu.etaxonomy.cdm.api.service.ITaxonService#findByEverythingFullText(java.lang.String, eu.etaxonomy.cdm.model.taxon.Classification, java.util.List, boolean, java.lang.Integer, java.lang.Integer, java.util.List, java.util.List)
1055 */
1056 @Deprecated
1057 @Override
1058 public Pager<SearchResult<TaxonBase>> findByEverythingFullText(String queryString, Classification classification, List<Language> languages, boolean highlightFragments, Integer pageSize, Integer pageNumber, List<OrderHint> orderHints, List<String> propertyPaths) throws CorruptIndexException, IOException, ParseException, LuceneMultiSearchException {
1059 return defaultTaxonService.findByEverythingFullText(queryString, classification, languages, highlightFragments, pageSize, pageNumber, orderHints, propertyPaths);
1060 }
1061
1062 /**
1063 * @param clazz
1064 * @param queryString
1065 * @param classification
1066 * @param languages
1067 * @param highlightFragments
1068 * @param pageSize
1069 * @param pageNumber
1070 * @param orderHints
1071 * @param propertyPaths
1072 * @return
1073 * @throws CorruptIndexException
1074 * @throws IOException
1075 * @throws ParseException
1076 * @see eu.etaxonomy.cdm.api.service.ITaxonService#findByFullText(java.lang.Class, java.lang.String, eu.etaxonomy.cdm.model.taxon.Classification, java.util.List, boolean, java.lang.Integer, java.lang.Integer, java.util.List, java.util.List)
1077 */
1078 @Override
1079 public Pager<SearchResult<TaxonBase>> findByFullText(Class<? extends TaxonBase> clazz, String queryString, Classification classification, List<Language> languages, boolean highlightFragments, Integer pageSize, Integer pageNumber, List<OrderHint> orderHints, List<String> propertyPaths) throws CorruptIndexException, IOException, ParseException {
1080 return defaultTaxonService.findByFullText(clazz, queryString, classification, languages, highlightFragments, pageSize, pageNumber, orderHints, propertyPaths);
1081 }
1082
1083 /**
1084 * @param areaFilter
1085 * @param statusFilter
1086 * @param classification
1087 * @param pageSize
1088 * @param pageNumber
1089 * @param orderHints
1090 * @param propertyPaths
1091 * @return
1092 * @throws IOException
1093 * @throws ParseException
1094 * @see eu.etaxonomy.cdm.api.service.ITaxonService#findByDistribution(java.util.List, java.util.List, eu.etaxonomy.cdm.model.taxon.Classification, java.lang.Integer, java.lang.Integer, java.util.List, java.util.List)
1095 */
1096 @Override
1097 public Pager<SearchResult<TaxonBase>> findByDistribution(List<NamedArea> areaFilter, List<PresenceAbsenceTermBase<?>> statusFilter, Classification classification, Integer pageSize, Integer pageNumber, List<OrderHint> orderHints, List<String> propertyPaths) throws IOException, ParseException {
1098 return defaultTaxonService.findByDistribution(areaFilter, statusFilter, classification, pageSize, pageNumber, orderHints, propertyPaths);
1099 }
1100
1101 /**
1102 * @param searchModes
1103 * @param queryString
1104 * @param classification
1105 * @param namedAreas
1106 * @param distributionStatus
1107 * @param languages
1108 * @param highlightFragments
1109 * @param pageSize
1110 * @param pageNumber
1111 * @param orderHints
1112 * @param propertyPaths
1113 * @return
1114 * @throws CorruptIndexException
1115 * @throws IOException
1116 * @throws ParseException
1117 * @throws LuceneMultiSearchException
1118 * @see eu.etaxonomy.cdm.api.service.ITaxonService#findTaxaAndNamesByFullText(java.util.EnumSet, java.lang.String, eu.etaxonomy.cdm.model.taxon.Classification, java.util.Set, java.util.Set, java.util.List, boolean, java.lang.Integer, java.lang.Integer, java.util.List, java.util.List)
1119 */
1120 @Override
1121 public Pager<SearchResult<TaxonBase>> findTaxaAndNamesByFullText(EnumSet<TaxaAndNamesSearchMode> searchModes, String queryString, Classification classification, Set<NamedArea> namedAreas, Set<PresenceAbsenceTermBase<?>> distributionStatus, List<Language> languages, boolean highlightFragments, Integer pageSize, Integer pageNumber, List<OrderHint> orderHints, List<String> propertyPaths) throws CorruptIndexException, IOException, ParseException, LuceneMultiSearchException {
1122 return defaultTaxonService.findTaxaAndNamesByFullText(searchModes, queryString, classification, namedAreas, distributionStatus, languages, highlightFragments, pageSize, pageNumber, orderHints, propertyPaths);
1123 }
1124
1125 /**
1126 * @param clazz
1127 * @param queryString
1128 * @param classification
1129 * @param features
1130 * @param languages
1131 * @param highlightFragments
1132 * @param pageSize
1133 * @param pageNumber
1134 * @param orderHints
1135 * @param propertyPaths
1136 * @return
1137 * @throws CorruptIndexException
1138 * @throws IOException
1139 * @throws ParseException
1140 * @see eu.etaxonomy.cdm.api.service.ITaxonService#findByDescriptionElementFullText(java.lang.Class, java.lang.String, eu.etaxonomy.cdm.model.taxon.Classification, java.util.List, java.util.List, boolean, java.lang.Integer, java.lang.Integer, java.util.List, java.util.List)
1141 */
1142 @Override
1143 public Pager<SearchResult<TaxonBase>> findByDescriptionElementFullText(Class<? extends DescriptionElementBase> clazz, String queryString, Classification classification, List<Feature> features, List<Language> languages, boolean highlightFragments, Integer pageSize, Integer pageNumber, List<OrderHint> orderHints, List<String> propertyPaths) throws CorruptIndexException, IOException, ParseException {
1144 return defaultTaxonService.findByDescriptionElementFullText(clazz, queryString, classification, features, languages, highlightFragments, pageSize, pageNumber, orderHints, propertyPaths);
1145 }
1146
1147 /**
1148 * @param taxon
1149 * @param size
1150 * @param height
1151 * @param widthOrDuration
1152 * @param mimeTypes
1153 * @return
1154 * @deprecated
1155 * @see eu.etaxonomy.cdm.api.service.ITaxonService#getAllMedia(eu.etaxonomy.cdm.model.taxon.Taxon, int, int, int, java.lang.String[])
1156 */
1157 @Deprecated
1158 @Override
1159 public List<MediaRepresentation> getAllMedia(Taxon taxon, int size, int height, int widthOrDuration, String[] mimeTypes) {
1160 return defaultTaxonService.getAllMedia(taxon, size, height, widthOrDuration, mimeTypes);
1161 }
1162
1163 /**
1164 * @param taxon
1165 * @param includeRelationships
1166 * @param limitToGalleries
1167 * @param propertyPath
1168 * @return
1169 * @deprecated
1170 * @see eu.etaxonomy.cdm.api.service.ITaxonService#listTaxonDescriptionMedia(eu.etaxonomy.cdm.model.taxon.Taxon, java.util.Set, boolean, java.util.List)
1171 */
1172 @Deprecated
1173 @Override
1174 public List<Media> listTaxonDescriptionMedia(Taxon taxon, Set<TaxonRelationshipEdge> includeRelationships, boolean limitToGalleries, List<String> propertyPath) {
1175 return defaultTaxonService.listTaxonDescriptionMedia(taxon, includeRelationships, limitToGalleries, propertyPath);
1176 }
1177
1178 /**
1179 * @param taxon
1180 * @param includeRelationships
1181 * @param limitToGalleries
1182 * @param includeTaxonDescriptions
1183 * @param includeOccurrences
1184 * @param includeTaxonNameDescriptions
1185 * @param propertyPath
1186 * @return
1187 * @see eu.etaxonomy.cdm.api.service.ITaxonService#listMedia(eu.etaxonomy.cdm.model.taxon.Taxon, java.util.Set, java.lang.Boolean, java.lang.Boolean, java.lang.Boolean, java.lang.Boolean, java.util.List)
1188 */
1189 @Override
1190 public List<Media> listMedia(Taxon taxon, Set<TaxonRelationshipEdge> includeRelationships, Boolean limitToGalleries, Boolean includeTaxonDescriptions, Boolean includeOccurrences, Boolean includeTaxonNameDescriptions, List<String> propertyPath) {
1191 return defaultTaxonService.listMedia(taxon, includeRelationships, limitToGalleries, includeTaxonDescriptions, includeOccurrences, includeTaxonNameDescriptions, propertyPath);
1192 }
1193
1194 /**
1195 * @param listOfIDs
1196 * @return
1197 * @see eu.etaxonomy.cdm.api.service.ITaxonService#findTaxaByID(java.util.Set)
1198 */
1199 @Override
1200 public List<TaxonBase> findTaxaByID(Set<Integer> listOfIDs) {
1201 return defaultTaxonService.findTaxaByID(listOfIDs);
1202 }
1203
1204 /**
1205 * @param uuid
1206 * @param propertyPaths
1207 * @return
1208 * @see eu.etaxonomy.cdm.api.service.ITaxonService#findTaxonByUuid(java.util.UUID, java.util.List)
1209 */
1210 @Override
1211 public TaxonBase findTaxonByUuid(UUID uuid, List<String> propertyPaths) {
1212 return defaultTaxonService.findTaxonByUuid(uuid, propertyPaths);
1213 }
1214
1215 /**
1216 * @return
1217 * @see eu.etaxonomy.cdm.api.service.ITaxonService#countAllRelationships()
1218 */
1219 @Override
1220 public int countAllRelationships() {
1221 return defaultTaxonService.countAllRelationships();
1222 }
1223
1224 /**
1225 * @param propertyPath
1226 * @return
1227 * @see eu.etaxonomy.cdm.api.service.ITaxonService#findIdenticalTaxonNames(java.util.List)
1228 */
1229 @Override
1230 public List<TaxonNameBase> findIdenticalTaxonNames(List<String> propertyPath) {
1231 return defaultTaxonService.findIdenticalTaxonNames(propertyPath);
1232 }
1233
1234 /**
1235 * @param propertyPath
1236 * @return
1237 * @see eu.etaxonomy.cdm.api.service.ITaxonService#findIdenticalTaxonNameIds(java.util.List)
1238 */
1239 @Override
1240 public List<TaxonNameBase> findIdenticalTaxonNameIds(List<String> propertyPath) {
1241 return defaultTaxonService.findIdenticalTaxonNameIds(propertyPath);
1242 }
1243
1244 /**
1245 * @param name
1246 * @return
1247 * @see eu.etaxonomy.cdm.api.service.ITaxonService#getPhylumName(eu.etaxonomy.cdm.model.name.TaxonNameBase)
1248 */
1249 @Override
1250 public String getPhylumName(TaxonNameBase name) {
1251 return defaultTaxonService.getPhylumName(name);
1252 }
1253
1254 /**
1255 * @param syn
1256 * @return
1257 * @see eu.etaxonomy.cdm.api.service.ITaxonService#deleteSynonymRelationships(eu.etaxonomy.cdm.model.taxon.Synonym)
1258 */
1259 @Override
1260 public long deleteSynonymRelationships(Synonym syn) {
1261 return defaultTaxonService.deleteSynonymRelationships(syn);
1262 }
1263
1264 /**
1265 * @param taxonBase
1266 * @param type
1267 * @param pageSize
1268 * @param pageNumber
1269 * @param orderHints
1270 * @param propertyPaths
1271 * @param direction
1272 * @return
1273 * @see eu.etaxonomy.cdm.api.service.ITaxonService#listSynonymRelationships(eu.etaxonomy.cdm.model.taxon.TaxonBase, eu.etaxonomy.cdm.model.taxon.SynonymRelationshipType, java.lang.Integer, java.lang.Integer, java.util.List, java.util.List, eu.etaxonomy.cdm.model.common.RelationshipBase.Direction)
1274 */
1275 @Override
1276 public List<SynonymRelationship> listSynonymRelationships(TaxonBase taxonBase, SynonymRelationshipType type, Integer pageSize, Integer pageNumber, List<OrderHint> orderHints, List<String> propertyPaths, Direction direction) {
1277 return defaultTaxonService.listSynonymRelationships(taxonBase, type, pageSize, pageNumber, orderHints, propertyPaths, direction);
1278 }
1279
1280 /**
1281 * @param taxonName
1282 * @return
1283 * @see eu.etaxonomy.cdm.api.service.ITaxonService#findBestMatchingTaxon(java.lang.String)
1284 */
1285 @Override
1286 public Taxon findBestMatchingTaxon(String taxonName) {
1287 return defaultTaxonService.findBestMatchingTaxon(taxonName);
1288 }
1289
1290 /**
1291 * @param config
1292 * @return
1293 * @see eu.etaxonomy.cdm.api.service.ITaxonService#findBestMatchingTaxon(eu.etaxonomy.cdm.api.service.config.MatchingTaxonConfigurator)
1294 */
1295 @Override
1296 public Taxon findBestMatchingTaxon(MatchingTaxonConfigurator config) {
1297 return defaultTaxonService.findBestMatchingTaxon(config);
1298 }
1299
1300 /**
1301 * @param taxonName
1302 * @return
1303 * @see eu.etaxonomy.cdm.api.service.ITaxonService#findBestMatchingSynonym(java.lang.String)
1304 */
1305 @Override
1306 public Synonym findBestMatchingSynonym(String taxonName) {
1307 return defaultTaxonService.findBestMatchingSynonym(taxonName);
1308 }
1309
1310 /**
1311 * @return
1312 * @see eu.etaxonomy.cdm.api.service.ITaxonService#getUuidAndTitleCacheTaxon()
1313 */
1314 @Override
1315 public List<UuidAndTitleCache<TaxonBase>> getUuidAndTitleCacheTaxon() {
1316 return defaultTaxonService.getUuidAndTitleCacheTaxon();
1317 }
1318
1319 /**
1320 * @return
1321 * @see eu.etaxonomy.cdm.api.service.ITaxonService#getUuidAndTitleCacheSynonym()
1322 */
1323 @Override
1324 public List<UuidAndTitleCache<TaxonBase>> getUuidAndTitleCacheSynonym() {
1325 return defaultTaxonService.getUuidAndTitleCacheSynonym();
1326 }
1327
1328 /**
1329 * @param configurator
1330 * @return
1331 * @see eu.etaxonomy.cdm.api.service.ITaxonService#findTaxaAndNamesForEditor(eu.etaxonomy.cdm.api.service.config.IFindTaxaAndNamesConfigurator)
1332 */
1333 @Override
1334 public List<UuidAndTitleCache<TaxonBase>> findTaxaAndNamesForEditor(IFindTaxaAndNamesConfigurator configurator) {
1335 return defaultTaxonService.findTaxaAndNamesForEditor(configurator);
1336 }
1337
1338 /**
1339 * @param taxon
1340 * @param tree
1341 * @param type
1342 * @param doWithMisappliedNames
1343 * @return
1344 * @see eu.etaxonomy.cdm.api.service.ITaxonService#createInferredSynonyms(eu.etaxonomy.cdm.model.taxon.Taxon, eu.etaxonomy.cdm.model.taxon.Classification, eu.etaxonomy.cdm.model.taxon.SynonymRelationshipType, boolean)
1345 */
1346 @Override
1347 public List<Synonym> createInferredSynonyms(Taxon taxon, Classification tree, SynonymRelationshipType type, boolean doWithMisappliedNames) {
1348 return defaultTaxonService.createInferredSynonyms(taxon, tree, type, doWithMisappliedNames);
1349 }
1350
1351 /**
1352 * @param taxon
1353 * @param tree
1354 * @param doWithMisappliedNames
1355 * @return
1356 * @see eu.etaxonomy.cdm.api.service.ITaxonService#createAllInferredSynonyms(eu.etaxonomy.cdm.model.taxon.Taxon, eu.etaxonomy.cdm.model.taxon.Classification, boolean)
1357 */
1358 @Override
1359 public List<Synonym> createAllInferredSynonyms(Taxon taxon, Classification tree, boolean doWithMisappliedNames) {
1360 return defaultTaxonService.createAllInferredSynonyms(taxon, tree, doWithMisappliedNames);
1361 }
1362
1363 /* (non-Javadoc)
1364 * @see eu.etaxonomy.cdm.api.service.ITaxonService#deleteSynonym(eu.etaxonomy.cdm.model.taxon.Synonym, eu.etaxonomy.cdm.api.service.config.SynonymDeletionConfigurator)
1365 */
1366 @Override
1367 public void deleteSynonym(Synonym arg0, SynonymDeletionConfigurator arg1) {
1368 defaultTaxonService.deleteSynonym(arg0, arg1);
1369 }
1370
1371 /* (non-Javadoc)
1372 * @see eu.etaxonomy.cdm.api.service.ITaxonService#deleteSynonym(eu.etaxonomy.cdm.model.taxon.Synonym, eu.etaxonomy.cdm.model.taxon.Taxon, eu.etaxonomy.cdm.api.service.config.SynonymDeletionConfigurator)
1373 */
1374 @Override
1375 public void deleteSynonym(Synonym arg0, Taxon arg1, SynonymDeletionConfigurator arg2) {
1376 defaultTaxonService.deleteSynonym(arg0, arg1, arg2);
1377 }
1378
1379 /* (non-Javadoc)
1380 * @see eu.etaxonomy.cdm.api.service.ITaxonService#deleteTaxon(eu.etaxonomy.cdm.model.taxon.Taxon, eu.etaxonomy.cdm.api.service.config.TaxonDeletionConfigurator, eu.etaxonomy.cdm.model.taxon.Classification)
1381 */
1382 @Override
1383 public void deleteTaxon(Taxon arg0, TaxonDeletionConfigurator arg1, Classification arg2)
1384 throws DataChangeNoRollbackException {
1385 defaultTaxonService.deleteTaxon(arg0, arg1, arg2);
1386 }
1387
1388
1389
1390 }