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When retrieving associated specimens retrieve all
2015-11-17
Patrick Plitzner
When retrieving associated specimens retrieve all
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2015-11-17
Patrick Plitzner
Add javadoc
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2015-11-16
Patrick Plitzner
Remove failing legacy test
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2015-11-16
Patrick Plitzner
Refactored import return type from boolean to ImportResult
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2015-11-16
Patrick Plitzner
Move import report to import state super class
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2015-11-11
Patrick Plitzner
Add orphanRemoval to SingleReadAlignment set of Sequence...
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2015-11-10
Patrick Plitzner
Add UUID delete method to occurrence service #5200
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2015-11-10
Patrick Plitzner
Fix sequence and single read deletion #5200
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2015-11-10
Patrick Plitzner
Add test for deleting SingleRead that is attached to...
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2015-11-10
Patrick Plitzner
Set singleRead to null when removing SingleReadAlignment...
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2015-11-10
Patrick Plitzner
added DAO for SingleReads #5200
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2015-11-10
Patrick Plitzner
Added test for taxon (name) <-> specimen association
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2015-11-03
Patrick Plitzner
Evaluate publish flag in portal controller
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2015-11-03
Patrick Plitzner
Return type designations with associated taxa
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2015-11-03
Patrick Plitzner
Fix return type
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2015-10-29
Patrick Plitzner
Fix NPE in test
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2015-10-28
Patrick Plitzner
Return correct match strategy #5337
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2015-10-28
Patrick Plitzner
Fix typo
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2015-10-28
Patrick Plitzner
Add amplificatiion ressult to updated objects when...
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2015-10-28
Patrick Plitzner
Fix moving of derivatives with null parent (+test)
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2015-10-27
Patrick Plitzner
Allow null for parent when moving derivatives
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2015-10-26
Patrick Plitzner
Fix NPE in ABCD import collection matching
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2015-10-26
Patrick Plitzner
Add stack trace to import report
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2015-10-07
Patrick Plitzner
Add new service method for retrieving all associated...
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2015-10-02
Patrick Plitzner
Extend media gathering for taxon specimens
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2015-09-08
Patrick Plitzner
Set sequence to null when removing a single read #5200
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2015-09-02
Patrick Plitzner
Enhance ABCD import report
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2015-09-01
Patrick Plitzner
Merge branch 'develop' into abcd
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2015-09-01
Patrick Plitzner
Add test for non-parsabel taxon name
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2015-09-01
Patrick Plitzner
Refine rank parsing
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2015-08-31
Patrick Plitzner
Add new test for name parsing
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2015-08-31
Patrick Plitzner
Increase reference titlecache in test DBs
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2015-08-19
Patrick Plitzner
Enhance ignored import due to already existing specimens
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2015-08-17
Patrick Plitzner
Check capabilites of BioCase provider for supported...
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2015-08-12
Patrick Plitzner
Fix broken test
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2015-08-12
Patrick Plitzner
Fix UniqueKey issue for sequence ciations
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2015-07-22
Patrick Plitzner
Avoid concurrent modification during deep delete.
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2015-07-21
Patrick Plitzner
Add support for ABCD 2.0.6 in UnitAssociationParser
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2015-07-20
Patrick Plitzner
# WARNING: head commit changed in the meantime
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2015-07-15
Patrick Plitzner
Merge branch 'develop' into abcd
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2015-07-15
Patrick Plitzner
Add new test file
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2015-07-15
Patrick Plitzner
Add two new test files
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2015-07-15
Patrick Plitzner
Enhance name parsing
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2015-07-15
Patrick Plitzner
Error logging for name parsing
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2015-07-15
Patrick Plitzner
Enhance name parsing
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2015-07-15
Patrick Plitzner
Remove parseNameAutomatically flag
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2015-07-14
Patrick Plitzner
Add test to @ignore
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2015-07-14
Patrick Plitzner
Refactor ABCD import
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2015-07-14
Patrick Plitzner
Refactor ABCD import
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2015-07-13
Patrick Plitzner
Merge branch 'master' into abcd
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2015-07-13
Patrick Plitzner
Add new GGBN import test
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2015-07-13
Patrick Plitzner
Increase character limit for titlecaches in test DB
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2015-07-13
Patrick Plitzner
Fix taxon existance check
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2015-07-13
Patrick Plitzner
Merge branch 'master' into abcd
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2015-07-13
Patrick Plitzner
Add import report logging to utility methods
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2015-07-08
Patrick Plitzner
Merge branch 'master' into abcd
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2015-07-08
Patrick Plitzner
Catch exception instead of throwing them
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2015-07-08
Patrick Plitzner
Catch exception instead of throwing them
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2015-07-08
Patrick Plitzner
Error loggind during import
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2015-07-08
Patrick Plitzner
Merge branch 'master' into abcd
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2015-07-08
Patrick Plitzner
Add <IDENTIFIER> to clear DB script
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2015-07-08
Patrick Plitzner
Clear Terms before starting test
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2015-07-08
Patrick Plitzner
Remove countries and areas to avoid test failure
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2015-07-08
Patrick Plitzner
Add exception during import to report
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2015-07-08
Patrick Plitzner
Fix classification handling for new and exisiting taxa
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2015-07-07
Patrick Plitzner
Add new test for classification handling
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2015-07-07
Patrick Plitzner
Exception handling
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2015-07-07
Patrick Plitzner
Merge branch 'master' into abcd
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2015-07-07
Patrick Plitzner
Test classification handling
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2015-07-07
Patrick Plitzner
Handle default classification in state object
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2015-07-07
Patrick Plitzner
Add tests for classification handling
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2015-07-07
Patrick Plitzner
Fix classification handling in ABCD import
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2015-07-07
Patrick Plitzner
Check ignoreAuthorship flag with different authors...
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2015-07-06
Patrick Plitzner
Remove unneccessary check
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2015-07-06
Patrick Plitzner
Log exceptions during import in the report file
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2015-07-06
Patrick Plitzner
Extend tests for GGBN import.
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2015-07-06
Patrick Plitzner
Merge branch 'master' into abcd
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2015-07-02
Patrick Plitzner
removed named areas to avoid test failure
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2015-07-02
Patrick Plitzner
Add test for importing two dna units with associated...
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2015-07-02
Patrick Plitzner
Reset prefix after importing associated units
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2015-07-02
Patrick Plitzner
Do not close system.out
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2015-07-02
Patrick Plitzner
Add test for importing two dna units with associated...
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2015-07-02
Patrick Plitzner
Reset prefix after importing associated units
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2015-07-02
Patrick Plitzner
Do not close system.out
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2015-07-01
Patrick Plitzner
Ignore createTestData()
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2015-07-01
Patrick Plitzner
Add accidentally removed test file
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2015-07-01
Patrick Plitzner
Extend step-by-step deletion test
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2015-07-01
Patrick Plitzner
Soften association type matching.
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2015-07-01
Patrick Plitzner
Map preparation material to derivation event description
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2015-07-01
Patrick Plitzner
Test import of sparse ABCD file
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2015-07-01
Patrick Plitzner
Fix potential NPE
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2015-07-01
Patrick Plitzner
Add method for single read deletion
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2015-07-01
Patrick Plitzner
Fix singleton constructor with specimen types
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2015-07-01
Patrick Plitzner
Do not set consensus sequence of single read alignment...
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2015-07-01
Patrick Plitzner
Add delete method for SingleReads
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2015-07-01
Patrick Plitzner
Remove comments
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2015-06-30
Patrick Plitzner
Fix potential NPE
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2015-06-30
Patrick Plitzner
Evaluate unit association type in ABCD import
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2015-06-30
Patrick Plitzner
Check if primer or amplification already exist
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2015-06-30
Patrick Plitzner
Evaluate UnitAssociationType during import
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