BGBM BDI Git - cdmlib.git/search

2015-07-22	Patrick Plitzner	Avoid concurrent modification during deep delete.	commit \| commitdiff \| tree
2015-07-21	Patrick Plitzner	Add support for ABCD 2.0.6 in UnitAssociationParser	commit \| commitdiff \| tree
2015-07-20	Patrick Plitzner	# WARNING: head commit changed in the meantime	commit \| commitdiff \| tree
2015-07-15	Patrick Plitzner	Merge branch 'develop' into abcd	commit \| commitdiff \| tree
2015-07-15	Patrick Plitzner	Add new test file	commit \| commitdiff \| tree
2015-07-15	Patrick Plitzner	Add two new test files	commit \| commitdiff \| tree
2015-07-15	Patrick Plitzner	Enhance name parsing	commit \| commitdiff \| tree
2015-07-15	Patrick Plitzner	Error logging for name parsing	commit \| commitdiff \| tree
2015-07-15	Patrick Plitzner	Enhance name parsing	commit \| commitdiff \| tree
2015-07-15	Patrick Plitzner	Remove parseNameAutomatically flag	commit \| commitdiff \| tree
2015-07-14	Patrick Plitzner	Add test to @ignore	commit \| commitdiff \| tree
2015-07-14	Patrick Plitzner	Refactor ABCD import	commit \| commitdiff \| tree
2015-07-14	Patrick Plitzner	Refactor ABCD import	commit \| commitdiff \| tree
2015-07-13	Patrick Plitzner	Merge branch 'master' into abcd	commit \| commitdiff \| tree
2015-07-13	Patrick Plitzner	Add new GGBN import test	commit \| commitdiff \| tree
2015-07-13	Patrick Plitzner	Increase character limit for titlecaches in test DB	commit \| commitdiff \| tree
2015-07-13	Patrick Plitzner	Fix taxon existance check	commit \| commitdiff \| tree
2015-07-13	Patrick Plitzner	Merge branch 'master' into abcd	commit \| commitdiff \| tree
2015-07-13	Patrick Plitzner	Add import report logging to utility methods	commit \| commitdiff \| tree
2015-07-08	Patrick Plitzner	Merge branch 'master' into abcd	commit \| commitdiff \| tree
2015-07-08	Patrick Plitzner	Catch exception instead of throwing them	commit \| commitdiff \| tree
2015-07-08	Patrick Plitzner	Catch exception instead of throwing them	commit \| commitdiff \| tree
2015-07-08	Patrick Plitzner	Error loggind during import	commit \| commitdiff \| tree
2015-07-08	Patrick Plitzner	Merge branch 'master' into abcd	commit \| commitdiff \| tree
2015-07-08	Patrick Plitzner	Add <IDENTIFIER> to clear DB script	commit \| commitdiff \| tree
2015-07-08	Patrick Plitzner	Clear Terms before starting test	commit \| commitdiff \| tree
2015-07-08	Patrick Plitzner	Remove countries and areas to avoid test failure	commit \| commitdiff \| tree
2015-07-08	Patrick Plitzner	Add exception during import to report	commit \| commitdiff \| tree
2015-07-08	Patrick Plitzner	Fix classification handling for new and exisiting taxa	commit \| commitdiff \| tree
2015-07-07	Patrick Plitzner	Add new test for classification handling	commit \| commitdiff \| tree
2015-07-07	Patrick Plitzner	Exception handling	commit \| commitdiff \| tree
2015-07-07	Patrick Plitzner	Merge branch 'master' into abcd	commit \| commitdiff \| tree
2015-07-07	Patrick Plitzner	Test classification handling	commit \| commitdiff \| tree
2015-07-07	Patrick Plitzner	Handle default classification in state object	commit \| commitdiff \| tree
2015-07-07	Patrick Plitzner	Add tests for classification handling	commit \| commitdiff \| tree
2015-07-07	Patrick Plitzner	Fix classification handling in ABCD import	commit \| commitdiff \| tree
2015-07-07	Patrick Plitzner	Check ignoreAuthorship flag with different authors...	commit \| commitdiff \| tree
2015-07-06	Patrick Plitzner	Remove unneccessary check	commit \| commitdiff \| tree
2015-07-06	Patrick Plitzner	Log exceptions during import in the report file	commit \| commitdiff \| tree
2015-07-06	Patrick Plitzner	Extend tests for GGBN import.	commit \| commitdiff \| tree
2015-07-06	Patrick Plitzner	Merge branch 'master' into abcd	commit \| commitdiff \| tree
2015-07-02	Patrick Plitzner	removed named areas to avoid test failure	commit \| commitdiff \| tree
2015-07-02	Patrick Plitzner	Add test for importing two dna units with associated...	commit \| commitdiff \| tree
2015-07-02	Patrick Plitzner	Reset prefix after importing associated units	commit \| commitdiff \| tree
2015-07-02	Patrick Plitzner	Do not close system.out	commit \| commitdiff \| tree
2015-07-02	Patrick Plitzner	Add test for importing two dna units with associated...	commit \| commitdiff \| tree
2015-07-02	Patrick Plitzner	Reset prefix after importing associated units	commit \| commitdiff \| tree
2015-07-02	Patrick Plitzner	Do not close system.out	commit \| commitdiff \| tree
2015-07-01	Patrick Plitzner	Ignore createTestData()	commit \| commitdiff \| tree
2015-07-01	Patrick Plitzner	Add accidentally removed test file	commit \| commitdiff \| tree
2015-07-01	Patrick Plitzner	Extend step-by-step deletion test	commit \| commitdiff \| tree
2015-07-01	Patrick Plitzner	Soften association type matching.	commit \| commitdiff \| tree
2015-07-01	Patrick Plitzner	Map preparation material to derivation event description	commit \| commitdiff \| tree
2015-07-01	Patrick Plitzner	Test import of sparse ABCD file	commit \| commitdiff \| tree
2015-07-01	Patrick Plitzner	Fix potential NPE	commit \| commitdiff \| tree
2015-07-01	Patrick Plitzner	Add method for single read deletion	commit \| commitdiff \| tree
2015-07-01	Patrick Plitzner	Fix singleton constructor with specimen types	commit \| commitdiff \| tree
2015-07-01	Patrick Plitzner	Do not set consensus sequence of single read alignment...	commit \| commitdiff \| tree
2015-07-01	Patrick Plitzner	Add delete method for SingleReads	commit \| commitdiff \| tree
2015-07-01	Patrick Plitzner	Remove comments	commit \| commitdiff \| tree
2015-06-30	Patrick Plitzner	Fix potential NPE	commit \| commitdiff \| tree
2015-06-30	Patrick Plitzner	Evaluate unit association type in ABCD import	commit \| commitdiff \| tree
2015-06-30	Patrick Plitzner	Check if primer or amplification already exist	commit \| commitdiff \| tree
2015-06-30	Patrick Plitzner	Evaluate UnitAssociationType during import	commit \| commitdiff \| tree
2015-06-30	Patrick Plitzner	Add find- and countByTitle() methods to primer and...	commit \| commitdiff \| tree
2015-06-30	Patrick Plitzner	Split up test for unit associations	commit \| commitdiff \| tree
2015-06-30	Patrick Plitzner	Fix potential NPE	commit \| commitdiff \| tree
2015-06-30	Patrick Plitzner	Parse sample designation in ABCD GGBN import	commit \| commitdiff \| tree
2015-06-30	Patrick Plitzner	Move up name parsing	commit \| commitdiff \| tree
2015-06-30	Patrick Plitzner	Import associated units	commit \| commitdiff \| tree
2015-06-30	Patrick Plitzner	Import associated units via BioCase query	commit \| commitdiff \| tree
2015-06-30	Patrick Plitzner	Move prefix parsing to utility method and import state	commit \| commitdiff \| tree
2015-06-30	Patrick Plitzner	Move unit parsing to utility class	commit \| commitdiff \| tree
2015-06-30	Patrick Plitzner	Import associated units in ABCD import	commit \| commitdiff \| tree
2015-06-30	Patrick Plitzner	- added missing columns for derivative import	commit \| commitdiff \| tree
2015-06-30	Patrick Plitzner	??	commit \| commitdiff \| tree
2015-06-30	Patrick Plitzner	Adapt to method parameter change	commit \| commitdiff \| tree
2015-06-30	Patrick Plitzner	Import associated units in ABCD import	commit \| commitdiff \| tree
2015-06-30	Patrick Plitzner	Refactor ABCD import	commit \| commitdiff \| tree
2015-06-30	Patrick Plitzner	- fixed date parsing	commit \| commitdiff \| tree
2015-06-30	Patrick Plitzner	- added preservation/preparation parameters	commit \| commitdiff \| tree
2015-06-30	Patrick Plitzner	- correctly connected primer, amplification, single...	commit \| commitdiff \| tree
2015-06-30	Patrick Plitzner	- refactored dna parsing	commit \| commitdiff \| tree

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