Andreas Müller [Fri, 17 Apr 2015 15:34:36 +0000 (15:34 +0000)]
cleanup LSIDAuthorityServiceImpl
Andreas Müller [Fri, 17 Apr 2015 14:16:18 +0000 (14:16 +0000)]
minor
Andreas Müller [Fri, 17 Apr 2015 13:41:50 +0000 (13:41 +0000)]
upgrade unitils 3.3->3.4.2 #4636
Andreas Müller [Fri, 17 Apr 2015 11:59:27 +0000 (11:59 +0000)]
additing titleCache to administrative area
Andreas Müller [Fri, 17 Apr 2015 10:59:42 +0000 (10:59 +0000)]
fix bug for wrong StringUtils used in PresenceAbsence term
Andreas Müller [Fri, 17 Apr 2015 10:30:34 +0000 (10:30 +0000)]
fix bug in TaxonNodeDaoHibernateImplTest.testSortindexForJavassist2
Andreas Müller [Fri, 17 Apr 2015 09:32:31 +0000 (09:32 +0000)]
revert easymock -> 3.1 because of IllegalArgumentException: Partial mocking doesn't make sense for interface
upgrade xmlunit 1.4 -> 1.6
#4636
Andreas Müller [Fri, 17 Apr 2015 09:02:31 +0000 (09:02 +0000)]
upgrade easymock 3.1 -> 3.3.1 #4636
Andreas Müller [Fri, 17 Apr 2015 08:47:52 +0000 (08:47 +0000)]
upgrade junit-benchmarks 0.5.0 -> 0.7.2 #4636
Andreas Müller [Fri, 17 Apr 2015 08:27:45 +0000 (08:27 +0000)]
upgrade junit 4.11 -> 4.12 #4636
Katja Luther [Thu, 16 Apr 2015 11:53:02 +0000 (11:53 +0000)]
adding first implementation for getting a csv file with all name informations
Andreas Kohlbecker [Wed, 15 Apr 2015 15:10:37 +0000 (15:10 +0000)]
removing sql tracing from DescriptionDaoImpl
Patric Plitzner [Wed, 15 Apr 2015 14:10:45 +0000 (14:10 +0000)]
- added image gallery to specimen details page
Andreas Müller [Wed, 15 Apr 2015 14:06:08 +0000 (14:06 +0000)]
fix Index out of range Exception, #3910
Andreas Kohlbecker [Wed, 15 Apr 2015 13:22:51 +0000 (13:22 +0000)]
inalizing implementing option to update the database scheme via cdmlib-remote, related to r19571
Andreas Kohlbecker [Wed, 15 Apr 2015 12:22:06 +0000 (12:22 +0000)]
fixing #4798 (NPE in DescriptionListController at descriptionElement/byTaxon?taxon={uuid})
Andreas Kohlbecker [Wed, 15 Apr 2015 10:06:37 +0000 (10:06 +0000)]
removing invalid link from swagger-ui
Andreas Kohlbecker [Wed, 15 Apr 2015 10:06:35 +0000 (10:06 +0000)]
whitespace
Katja Luther [Wed, 15 Apr 2015 09:45:54 +0000 (09:45 +0000)]
Katja Luther [Wed, 15 Apr 2015 09:45:04 +0000 (09:45 +0000)]
Katja Luther [Wed, 15 Apr 2015 09:17:01 +0000 (09:17 +0000)]
adapting the setters of attributes with @NullOrNotEmpty annotations #4653
Cherian Mathew [Wed, 15 Apr 2015 09:14:31 +0000 (09:14 +0000)]
fixed typo
Cherian Mathew [Wed, 15 Apr 2015 09:10:00 +0000 (09:10 +0000)]
corrected link to maven repo
Patric Plitzner [Tue, 14 Apr 2015 14:01:37 +0000 (14:01 +0000)]
- fixed parameter assignment with no effect
Patric Plitzner [Tue, 14 Apr 2015 13:17:59 +0000 (13:17 +0000)]
- added findOccurrences() and countOccurrences() to service layer
- added configurator for these methods
- optimized retrieval with HQL query
- made use of service method in DerivateSearchView
Patric Plitzner [Tue, 14 Apr 2015 12:59:38 +0000 (12:59 +0000)]
- fixed recursive method
Andreas Kohlbecker [Tue, 14 Apr 2015 12:55:00 +0000 (12:55 +0000)]
whitespace
Andreas Kohlbecker [Tue, 14 Apr 2015 12:54:58 +0000 (12:54 +0000)]
allowing to use the freetest search with empty query strings, so that only the additional search filters are taken into account
Andreas Kohlbecker [Tue, 14 Apr 2015 12:54:56 +0000 (12:54 +0000)]
order area terms DTOs by idInVocabulary
Andreas Kohlbecker [Tue, 14 Apr 2015 12:54:54 +0000 (12:54 +0000)]
fixing NPE in TaxonPortalController.doGetSubtreeMedia() for the request path taxon/{uuid}/subtree/media
Andreas Kohlbecker [Tue, 14 Apr 2015 12:54:48 +0000 (12:54 +0000)]
adding source folders
Katja Luther [Tue, 14 Apr 2015 12:08:27 +0000 (12:08 +0000)]
Katja Luther [Tue, 14 Apr 2015 11:59:15 +0000 (11:59 +0000)]
Katja Luther [Tue, 14 Apr 2015 11:55:42 +0000 (11:55 +0000)]
Katja Luther [Tue, 14 Apr 2015 11:48:35 +0000 (11:48 +0000)]
Katja Luther [Tue, 14 Apr 2015 11:23:34 +0000 (11:23 +0000)]
Katja Luther [Tue, 14 Apr 2015 07:48:18 +0000 (07:48 +0000)]
Katja Luther [Tue, 14 Apr 2015 07:25:59 +0000 (07:25 +0000)]
Patric Plitzner [Mon, 13 Apr 2015 15:01:12 +0000 (15:01 +0000)]
- reverted temporary changes for titleCache generation
Alexander Oppermann [Mon, 13 Apr 2015 13:35:26 +0000 (13:35 +0000)]
fixed request parameter to match the convention of using the pathvariable
Katja Luther [Mon, 13 Apr 2015 11:46:59 +0000 (11:46 +0000)]
Patric Plitzner [Mon, 13 Apr 2015 11:37:19 +0000 (11:37 +0000)]
- added wrapper for map service query to have access to the data points
- used data points as parameters for the bounding box of the point distribution map
Patric Plitzner [Thu, 9 Apr 2015 21:42:13 +0000 (21:42 +0000)]
- temporarily disabled test
Patric Plitzner [Thu, 9 Apr 2015 21:15:36 +0000 (21:15 +0000)]
- quick&dirty copy&pasted getMostSignificantIdentifier() to facade cache strategy
Patric Plitzner [Thu, 9 Apr 2015 09:36:40 +0000 (09:36 +0000)]
- fixed some design issues
Patric Plitzner [Wed, 8 Apr 2015 13:06:30 +0000 (13:06 +0000)]
- fixed citation string and specimen determination string in portal assembly
Patric Plitzner [Wed, 8 Apr 2015 12:12:35 +0000 (12:12 +0000)]
- fixed potential NPE
Patric Plitzner [Wed, 8 Apr 2015 11:34:52 +0000 (11:34 +0000)]
- fixed dateString assembly for compressed specimen table
Andreas Müller [Wed, 1 Apr 2015 15:21:42 +0000 (15:21 +0000)]
quick fix for cache strategy exception. Cache strategy not yet correctly created. #4773
Andreas Müller [Wed, 1 Apr 2015 03:13:45 +0000 (03:13 +0000)]
first implementation of team->person->team conversion #4769, #4770
Andreas Müller [Wed, 1 Apr 2015 01:20:20 +0000 (01:20 +0000)]
Fix merging of names of different types test
Andreas Müller [Wed, 1 Apr 2015 01:08:33 +0000 (01:08 +0000)]
allow different type merging not only for reallocation of links
Andreas Müller [Wed, 1 Apr 2015 01:07:05 +0000 (01:07 +0000)]
minor
Andreas Müller [Wed, 1 Apr 2015 00:23:13 +0000 (00:23 +0000)]
clean up AgentService
Andreas Müller [Wed, 1 Apr 2015 00:06:06 +0000 (00:06 +0000)]
minor
Andreas Müller [Wed, 1 Apr 2015 00:05:18 +0000 (00:05 +0000)]
remove onlyReallocate links as this is not yet implemented #4768
Andreas Müller [Tue, 31 Mar 2015 23:59:06 +0000 (23:59 +0000)]
Make deduplication of TeamOrPersonBase possible in cdmlib #4768 and solve test problem in CdmGenericDaoImplTest #2096, finding some bugs in between
Patric Plitzner [Tue, 31 Mar 2015 18:20:45 +0000 (18:20 +0000)]
- added service method to get the most significant identifier for a derived unit
- added character data icon to specimen table
- fixed derivate flags in DTO assembly
Patric Plitzner [Tue, 31 Mar 2015 14:23:18 +0000 (14:23 +0000)]
- added specimen citation, associated taxa and typed taxa to specimen page (#4765)
Patric Plitzner [Tue, 31 Mar 2015 12:36:43 +0000 (12:36 +0000)]
- get accessionNumber from specimen identifiers in this order accNo>barCode>catalogNumber
- refactored PHP
- added flag for specimen page in compose function
Patric Plitzner [Tue, 31 Mar 2015 07:04:03 +0000 (07:04 +0000)]
- fixed potential NPE
- fixed herbaria assembly
Andreas Müller [Mon, 30 Mar 2015 15:23:29 +0000 (15:23 +0000)]
add O'Connor and zur Strassen as parsable authors. #4759
Patric Plitzner [Mon, 30 Mar 2015 14:32:33 +0000 (14:32 +0000)]
- added setter
Andreas Müller [Sat, 28 Mar 2015 10:52:23 +0000 (10:52 +0000)]
add new UTF8 characters
Andreas Müller [Sat, 28 Mar 2015 10:46:38 +0000 (10:46 +0000)]
Fixing failing search test, using better utf8 handling
Andreas Kohlbecker [Fri, 27 Mar 2015 21:57:25 +0000 (21:57 +0000)]
correct handling of terms with multiple representations
Andreas Kohlbecker [Fri, 27 Mar 2015 17:49:53 +0000 (17:49 +0000)]
implementing better namedAreasInUse service for #3994 (Select widget to choose the filter areas for the advanced search)
Andreas Kohlbecker [Fri, 27 Mar 2015 17:49:45 +0000 (17:49 +0000)]
fixing broken characters
Andreas Müller [Fri, 27 Mar 2015 16:45:31 +0000 (16:45 +0000)]
implement clone for SingleReadAlignment
Andreas Müller [Fri, 27 Mar 2015 16:24:43 +0000 (16:24 +0000)]
minor
Andreas Müller [Fri, 27 Mar 2015 16:21:33 +0000 (16:21 +0000)]
first implementation of WrappedCdmDataSource #3910
Andreas Müller [Fri, 27 Mar 2015 16:20:39 +0000 (16:20 +0000)]
no null return type even safer
Patric Plitzner [Fri, 27 Mar 2015 16:18:36 +0000 (16:18 +0000)]
- added generic method for specimen details used in table and details page
Patric Plitzner [Fri, 27 Mar 2015 16:17:50 +0000 (16:17 +0000)]
- fixed potential LIE
Patric Plitzner [Fri, 27 Mar 2015 15:15:58 +0000 (15:15 +0000)]
- fixed potential null values
- added uuid to preserved specimen dto
Andreas Müller [Fri, 27 Mar 2015 14:42:45 +0000 (14:42 +0000)]
get Shift always returns empty array instead of null #4734
Andreas Müller [Fri, 27 Mar 2015 13:39:02 +0000 (13:39 +0000)]
remove imports
Andreas Müller [Fri, 27 Mar 2015 12:54:48 +0000 (12:54 +0000)]
minor cleanup
Patric Plitzner [Fri, 27 Mar 2015 10:40:23 +0000 (10:40 +0000)]
- refactored DTO assembly for compressed specimen table in the data portal
- now data is assembled for each individual preserved specimen and the for the parent field unit
Andreas Müller [Fri, 27 Mar 2015 10:32:19 +0000 (10:32 +0000)]
make indexing type collection a list (was Set before)
Andreas Müller [Thu, 26 Mar 2015 12:24:38 +0000 (12:24 +0000)]
add tests to avoid inconsistencies in recursive cdm updater calls
Andreas Kohlbecker [Thu, 26 Mar 2015 08:15:01 +0000 (08:15 +0000)]
minimum maven version back to 3.0.5
Andreas Kohlbecker [Thu, 26 Mar 2015 08:12:35 +0000 (08:12 +0000)]
lowering minimum maven version to 3.0.4
Andreas Müller [Wed, 25 Mar 2015 17:37:58 +0000 (17:37 +0000)]
bugfix for 34_341 Updater
Andreas Kohlbecker [Wed, 25 Mar 2015 12:32:19 +0000 (12:32 +0000)]
new launchers for JettyLauncher plugin, also new structure in ide folder
Andreas Kohlbecker [Wed, 25 Mar 2015 12:32:15 +0000 (12:32 +0000)]
setting minimum maven version to 3.0.5 and specifying missing version of maven-project-info-reports-plugin
Andreas Müller [Tue, 24 Mar 2015 21:29:09 +0000 (21:29 +0000)]
add test for disassamble
Andreas Müller [Tue, 24 Mar 2015 21:24:59 +0000 (21:24 +0000)]
remove failing sqlType test
Andreas Müller [Tue, 24 Mar 2015 21:17:01 +0000 (21:17 +0000)]
handle empty Shift #4734
Andreas Müller [Tue, 24 Mar 2015 10:57:12 +0000 (10:57 +0000)]
merge validation commits r23146, r23162, r23163 into trunk
Andreas Müller [Tue, 24 Mar 2015 10:35:07 +0000 (10:35 +0000)]
merge r23161 into trunk
Andreas Müller [Tue, 24 Mar 2015 10:31:30 +0000 (10:31 +0000)]
merge r23145 into trunk
edit-jenkins [Tue, 24 Mar 2015 09:42:06 +0000 (09:42 +0000)]
[maven-release-plugin] prepare for next development iteration
edit-jenkins [Tue, 24 Mar 2015 09:42:00 +0000 (09:42 +0000)]
[maven-release-plugin] prepare release cdmlib-parent-3.5.0
Andreas Kohlbecker [Tue, 24 Mar 2015 09:18:14 +0000 (09:18 +0000)]
decoupling version of cdm-vaadin, to solve problems in the maven release:prepare phase
Andreas Kohlbecker [Tue, 24 Mar 2015 09:18:12 +0000 (09:18 +0000)]
ignoring .settings
edit-jenkins [Mon, 23 Mar 2015 17:06:17 +0000 (17:06 +0000)]
[maven-release-plugin] prepare for next development iteration
edit-jenkins [Mon, 23 Mar 2015 17:06:16 +0000 (17:06 +0000)]
[maven-release-plugin] prepare release cdmlib-commons-3.5.0
Andreas Müller [Mon, 23 Mar 2015 15:55:43 +0000 (15:55 +0000)]
add Transient to getNullSafe methods and make MarkerType not null Level2 rule
Alexander Oppermann [Mon, 23 Mar 2015 14:30:32 +0000 (14:30 +0000)]
Improved parser for zoological names...